HHsearch alignment for GI: 254780903 and conserved domain: PRK11091
>PRK11091 aerobic respiration control sensor protein ArcB; Provisional.
Probab=99.34 E-value=1.2e-11 Score=102.03 Aligned_cols=146 Identities=9% Similarity=0.026 Sum_probs=93.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHH---HHHCCCCCEEEEECCCCCEEEECCCHHHHCCCCHHHHCCCCHHHHCCCCCCCHH
Q ss_conf 00112235548999999999885---310178978999969980899714205551997889607610432054433202
Q gi|254780903|r 99 NNNIKFDLASQKKAESMLGQLLA---KTRFLSESFILLAQPNELVFASSTKNSHYIGKKIGEIIPELSRSRSRSKTVQMS 175 (766)
Q Consensus 99 ~~~~~~d~~~~~~ae~~L~~~~~---~~~~~~~~~i~i~d~~g~i~~~n~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 175 (766)
T Consensus 133 ~~~l~~e~~~r~~~q~~l~~~~~llRs~~D~~Pdli~~rd~~g~f~gCNrafe~~~G~~e~eliG~t~~d~~~~e~a~~~ 212 (779)
T PRK11091 133 FEDLKNEIKEREETQIELEQQSSLLRSFLDASPDLVYYRNEDGEFSGCNRAMELLTGKSEKQLVGLTPKDVYSPEAAEKV 212 (779)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHCCCHHHHCCCCHHHHCCHHHHHHH
T ss_conf 99999999998999999999889999885028751578779876534109999880999899849983552799889999
Q ss_pred HH----HCCCCHHEEEEEECCC-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 32----1153100001233157-782599997423210123455655456878878999999998888999999999999
Q gi|254780903|r 176 EA----SLDQQPYHVLSVNLPH-NSGSILIINSRVPLLRLWREEVTLEVVFFSIISALLLFILFSYYRQAKKNKENDTIL 250 (766)
Q Consensus 176 ~~----~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~a~~~dit~~r~ae~~l 250 (766)
T Consensus 213 ~~~D~~v~~~~~~~~~e~w~~~~dG~~~~~e~~k~P~~d~--------------~g~~~G~~g--~~rDITerk~aeeaL 276 (779)
T PRK11091 213 IETDEKVFRHNVSLTYEQWLDYPDGRKACFELRKVPFYDR--------------VGKRHGLMG--FGRDITERKRYQDAL 276 (779)
T ss_pred HHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEEEEEEECC--------------CCCEEEEEE--EEECCHHHHHHHHHH
T ss_conf 9738999864798211134664898667899864013538--------------997887863--001601778999999
Q ss_pred HHH-HHHHHHH
Q ss_conf 999-9999999
Q gi|254780903|r 251 LEA-NICVETA 260 (766)
Q Consensus 251 ~es-e~rl~~a 260 (766)
T Consensus 277 E~AsraKS~FL 287 (779)
T PRK11091 277 EKASRDKTTFI 287 (779)
T ss_pred HHHHHHHHHHH
T ss_conf 99999999999