HHsearch alignment for GI: 254780903 and conserved domain: PRK11466
>PRK11466 hybrid sensory histidine kinase TorS; Provisional.
Probab=100.00 E-value=0 Score=513.22 Aligned_cols=245 Identities=29% Similarity=0.512 Sum_probs=226.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 99864445799999999999999998878999999998767522247899999999860346889938999999999999
Q gi|254780903|r 512 RQILERQKTELSIANAKYQVEKERAETANKTKSEFLAKMSHELRTPLNAILGFSEVIKKEIFGELGSVKYYEYAQDIHYS 591 (766)
Q Consensus 512 ~~~~~~~~~~L~~~~~~l~~~~~~ae~an~~k~efla~isHelrtPL~aI~g~~ell~~~~~~~~~~e~~~~~l~~I~~~ 591 (766)
T Consensus 413 e~~V~~RT~eL~~~~~~~~~Ar~~AE~AnrAKS~FLA~MSHEIRTPLNgIlG~~eLL~~~---~l-~~~qr~~l~~I~~s 488 (912)
T PRK11466 413 AAQVKARTAELQELVIEHRQARAEAEKASQAKSAFLAAMSHEIRTPLYGILGTAQLLADN---PA-LNAQRDDLRAITDS 488 (912)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC---CC-CHHHHHHHHHHHHH
T ss_conf 999999999999998999999999999999999999871397677599999999998479---99-98999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCC--CCCCCEEEECHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCE--EEECHHHHHHHHHH
Q ss_conf 99999997776778887419--830120331699999999999999998479589998089978--99868999999999
Q gi|254780903|r 592 GQHLLNMINNILEMSKIETE--KISIDKQNADLIPIINEGIRLIGSSAQSKNIKIEKKIPSELF--FNADKRIIKKILFP 667 (766)
Q Consensus 592 ~~~l~~lI~diLd~srieag--~~~~~~~~~dl~~~i~~~~~~~~~~~~~k~i~l~~~~~~~l~--v~~D~~~l~QVl~N 667 (766)
T Consensus 489 ~~~LL~lInDILD~SkiEaG~~~l~l~~~pf~l~~ll~~v~~~~~~~a~~k~l~l~~~~~~~lp~~v~gD~~RLrQIL~N 568 (912)
T PRK11466 489 GESLLTILNDILDYSAIEAGGKNVSVSDEPFEPRPLLESTLQLMSGRVKGRPIRLATDIADDVPSALMGDPRRIRQVITN 568 (912)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECHHHHHHHHHH
T ss_conf 99999999999999998189981388611568999999999999999983797899972799986086358899999999
Q ss_pred HHHHHHHCCCCCCEEEEEEEEECCEEEEEEEECCCCCCHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCE
Q ss_conf 88656534689888999999979989999997889789778543046505314675567788761689999999962986
Q gi|254780903|r 668 ILSNSIKFTNNNGKMMIRTSKIGQCVIITIADTGIGIPKSALEKIGQPFEPLHNQYDQSIGGFGLGLAISDALTNLHGGR 747 (766)
Q Consensus 668 Li~NAik~t~~~g~I~i~~~~~~~~v~i~V~D~G~GI~~e~~~~iF~pF~q~~~~~t~~~~GtGLGLaI~k~iVe~hgG~ 747 (766)
T Consensus 569 LlsNAiKFT~~-G~V~l~~~~~~~~l~~~V~DTGiGI~~e~~~~IF~~F~Q~~----~~~gGtGLGLaI~k~LvelMGG~ 643 (912)
T PRK11466 569 LLSNALRFTDE-GSIVLRSRTDGEQWLVEVEDSGCGIDPAKLAEIFQPFVQVS----GKRGGTGLGLTISSRLAQAMGGE 643 (912)
T ss_pred HHHHHCCCCCC-CEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHCCCCCCC----CCCCCCCHHHHHHHHHHHHCCCE
T ss_conf 99987061899-67999999869789999850899999999998844761588----99899266899999999987997
Q ss_pred EEEEEECCCCEEEEEECC
Q ss_conf 999979899529999735
Q gi|254780903|r 748 LKIISQEGKGTIVTICMP 765 (766)
Q Consensus 748 I~v~S~~g~Gttf~i~LP 765 (766)
T Consensus 644 I~V~S~~G~GS~F~~~LP 661 (912)
T PRK11466 644 LSATSTPEVGSCFCLRLP 661 (912)
T ss_pred EEEECCCCCCEEEEEEEE
T ss_conf 999716998728999997