HHsearch alignment for GI: 254780903 and conserved domain: PRK11644
>PRK11644 sensory histidine kinase UhpB; Provisional.
Probab=99.69 E-value=1.2e-13 Score=116.48 Aligned_cols=191 Identities=17% Similarity=0.251 Sum_probs=134.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECH
Q ss_conf 99999987675222478999999998603468899389999999999999999999777677888741983012033169
Q gi|254780903|r 543 KSEFLAKMSHELRTPLNAILGFSEVIKKEIFGELGSVKYYEYAQDIHYSGQHLLNMINNILEMSKIETEKISIDKQNADL 622 (766)
Q Consensus 543 k~efla~isHelrtPL~aI~g~~ell~~~~~~~~~~e~~~~~l~~I~~~~~~l~~lI~diLd~srieag~~~~~~~~~dl 622 (766)
T Consensus 304 Rr~IARELHDEiGQ~LTAIr~~a~~i~r~~~~---~~~~~~~a~~I~~l~~~i~~~vR~ll~~LR------P~~LDdLGL 374 (497)
T PRK11644 304 RRDVARELHDEIGQTITAIRTQASIVKRLAAD---NASVKQSGQLIEQLSLGVYDAVRRLLGRLR------PRQLDDLTL 374 (497)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHCC------CCCHHHCCH
T ss_conf 99999970003405999999999998632699---766899999999999999999999998609------031112489
Q ss_pred HHHHHHHHHHHHHHHHHCCCEEEEEECCCCE-EE-ECHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCEEEEEEEEC
Q ss_conf 9999999999999998479589998089978-99-868999999999886565346898889999999799899999978
Q gi|254780903|r 623 IPIINEGIRLIGSSAQSKNIKIEKKIPSELF-FN-ADKRIIKKILFPILSNSIKFTNNNGKMMIRTSKIGQCVIITIADT 700 (766)
Q Consensus 623 ~~~i~~~~~~~~~~~~~k~i~l~~~~~~~l~-v~-~D~~~l~QVl~NLi~NAik~t~~~g~I~i~~~~~~~~v~i~V~D~ 700 (766)
T Consensus 375 ~~AL~~Lv~e~~~~--~~gi~~~l~~~~~~~~L~~~~~itlYRIvQEaLTNi~KHA~A-~~V~I~L~~~~~~l~L~I~DD 451 (497)
T PRK11644 375 EQAIRSLMRELELE--DRGIVSHLDWQIDESALSETQRVTLFRVCQEGLNNIVKHADA-SAVTIQGWQQDERLMLVIEDN 451 (497)
T ss_pred HHHHHHHHHHHHHH--CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC-CEEEEEEEECCCEEEEEEEEC
T ss_conf 99999999987652--579559998268766798246889999999999999973788-769999997699899999889
Q ss_pred CCCCCHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCC
Q ss_conf 897897785430465053146755677887616899999999629869999798995299997359
Q gi|254780903|r 701 GIGIPKSALEKIGQPFEPLHNQYDQSIGGFGLGLAISDALTNLHGGRLKIISQEGKGTIVTICMPQ 766 (766)
Q Consensus 701 G~GI~~e~~~~iF~pF~q~~~~~t~~~~GtGLGLaI~k~iVe~hgG~I~v~S~~g~Gttf~i~LP~ 766 (766)
T Consensus 452 G~Gf~~~~---------------~~----~G~GL~GMrERV~aLGG~l~I~S~~--GT~I~V~LP~ 496 (497)
T PRK11644 452 GSGLPPGS---------------GQ----QGFGLRGMQERVSALGGTLTISCTH--GTRLSVTLPQ 496 (497)
T ss_pred CCCCCCCC---------------CC----CCCCCHHHHHHHHHCCCEEEEEECC--CCEEEEECCC
T ss_conf 98989898---------------99----9989267999999749979998289--9779995899