HHsearch alignment for GI: 254780903 and conserved domain: smart00433
>smart00433 TOP2c TopoisomeraseII. Eukaryotic DNA topoisomerase II, GyrB, ParE
Probab=92.22 E-value=0.02 Score=35.48 Aligned_cols=39 Identities=21% Similarity=0.133 Sum_probs=20.4
Q ss_pred EEEEEECCCCCEEEEEEEEEEEEECCCEEEEEEEEECCC
Q ss_conf 999988698988998899999983796069999984461
Q gi|254780903|r 330 QIFHMRHASGADIWIQVRAQMMRTISGGMNIIGIAMDLT 368 (766)
Q Consensus 330 ~e~Ri~~~DG~~~Wi~~r~~~i~d~~G~~~~iGi~~DIT 368 (766)
T Consensus 219 ~eva~~~s~~~~~~~~SFvN~I~T~~GGTHv~gf~~al~ 257 (594)
T smart00433 219 VEVAFQYTDGYSENIVSFVNNIATTEGGTHENGFKDALT 257 (594)
T ss_pred EEEEEEECCCCCCCCCEEEEEEECCCCCCHHHHHHHHHH
T ss_conf 999999659887210002314788999848899999999