RPSBLAST alignment for GI: 254780903 and conserved domain: COG5000

>gnl|CDD|34605 COG5000, NtrY, Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation [Signal transduction mechanisms]. Length = 712

 Score = 60.7 bits (147), Expect = 1e-09
 Identities = 48/236 (20%), Positives = 94/236 (39%), Gaps = 29/236 (12%)

Query: 544 SEFLAKMSHELRTPLNAILGFSEVIKKEIFGELGS--VKYYEYAQDIHYSGQHLLNMIN- 600
            +   +++HE++ PL  I   +E + +++  E+      +      I    + +  M++ 
Sbjct: 487 GDVARRIAHEIKNPLTPIQLSAERLLRKLGKEIDEDREVFDRCTDTIIRQVEDIKRMVDE 546

Query: 601 --NILEMSKIETEKISIDKQNADLIPIINEGIRLIGSSAQSKNIKIEKKIPSE-LFFNAD 657
                 M   + EK        DL  ++ E   L      + +I    +   E L   AD
Sbjct: 547 FRAFARMPAPKLEKS-------DLRALLKEVSFLYE--IGNDHIVFAAEFGGEPLIGMAD 597

Query: 658 KRIIKKILFPILSNSIKFTNNNGKMMIRTSKI-------GQCVIITIADTGIGIPKSALE 710
             ++ ++   +L N+ +          RT+ I          +++ + D G G P+   E
Sbjct: 598 ATLLGQVFGNLLKNAAEAIEAVEAEERRTALIRVSLDDADGRIVVDVIDNGKGFPR---E 654

Query: 711 KIGQPFEPLHNQYDQSIGGFGLGLAISDALTNLHGGRLKII-SQEGKGTIVTICMP 765
              +  EP     ++   G GLGLAI   +   HGGRL++  + +  G ++ I  P
Sbjct: 655 NRHRALEPYVTTREK---GTGLGLAIVKKIVEEHGGRLELHNAPDFDGAMIRIKFP 707