HHsearch alignment for GI: 254780904 and conserved domain: COG4752
>COG4752 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=95.99 E-value=0.0021 Score=41.24 Aligned_cols=135 Identities=23% Similarity=0.311 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHH-------------HHCCCCCCCHHCCCCHHHHHHCC-------CC
Q ss_conf 79999999997199804980888899999999985-------------31013444200137789984125-------53
Q gi|254780904|r 27 NIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSS-------------ANADCVIDSVRVFSNLKEAIADL-------HF 86 (268)
Q Consensus 27 NiGaiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a-------------~~a~~~~~~~~~~~~~~~a~~~~-------~~ 86 (268)
T Consensus 30 D~HDIaR~artYeikgYyiV~pidA--Q~~~~~r~i~yW~~g~G~~yNp~R~e~~~lv~l~~~le~ViEdIEk~eG~rPL 107 (190)
T COG4752 30 DLHDIARPARTYEIKGYYIVQPIDA--QRIVIQRQINYWLSGEGRKYNPTRYEIVQLVRLAYTLEEVIEDIEKEEGRRPL 107 (190)
T ss_pred CHHHHCCCCCCEEECCEEEEEECHH--HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
T ss_conf 4766325335035512799754378--89999999988762648767957888877776998899999998864477765
Q ss_pred CEEEECCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEE-CCCCCCCCCHHHHHHHHHHH
Q ss_conf 10120112234303412420356665531158816999945888424310001232220-47678734101688999999
Q gi|254780904|r 87 IYATTARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIIS-FPVNPLFPSLNISQAVLLMV 165 (268)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v~-IPt~~~~~SLNLS~AvaIvl 165 (268)
T Consensus 108 i~~TsAr~~~N~isy~~------lr~~I~e~dkp~LilfGT-GwGlpde~m~~sDYiLEPIra~sd~NHLSVRaAvAIIl 180 (190)
T COG4752 108 IVGTSARTYPNTISYSW------LRNEIQERDKPWLILFGT-GWGLPDELMNTSDYILEPIRAASDWNHLSVRAAVAIIL 180 (190)
T ss_pred EEECCCCCCCCCCCHHH------HHHHHHHCCCCEEEEECC-CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf 98513300678544888------887876337867999637-88998799877667232133057753153888899999
Q ss_pred HHHHH
Q ss_conf 99999
Q gi|254780904|r 166 WECME 170 (268)
Q Consensus 166 YEl~r 170 (268)
T Consensus 181 DRLfg 185 (190)
T COG4752 181 DRLFG 185 (190)
T ss_pred HHHHC
T ss_conf 99852