HHsearch alignment for GI: 254780904 and conserved domain: PRK10358
>PRK10358 putative tRNA/rRNA methyltransferase YibK; Provisional.
Probab=100.00 E-value=1.7e-34 Score=236.82 Aligned_cols=147 Identities=19% Similarity=0.234 Sum_probs=117.5
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCC--CEEEEC
Q ss_conf 689994288854799999999971998049808888999999999853101344420013778998412553--101201
Q gi|254780904|r 15 PVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHF--IYATTA 92 (268)
Q Consensus 15 ~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~--~~~~~~ 92 (268)
T Consensus 2 ~~IVL~~P~iP~N~G~i~R~ca~~g~-~L~LV~P~gf~~~dk~lrRAgldy~~~~~~~~~~~~~~f~~~~~~~r~~~~tt 80 (157)
T PRK10358 2 LNIVLYEPEIPPNTGNIIRLCANTGF-RLHIIEPMGFAWDDKRLRRAGLDYHEFTAVTRHHDYAAFLEAENPQRLFALTT 80 (157)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHCCC-EEEEEECCCCCCCCHHHHHHCCCCHHEEEEEECCCHHHHHHHCCCCEEEEEEC
T ss_conf 17999589888828999999996399-89998068878742666533163021268998089999997438972899725
Q ss_pred CCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC--CCCEEECCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 12234303412420356665531158816999945888424310001--2322204767873410168899999999999
Q gi|254780904|r 93 RNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIAL--SNAIISFPVNPLFPSLNISQAVLLMVWECME 170 (268)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~--cd~~v~IPt~~~~~SLNLS~AvaIvlYEl~r 170 (268)
T Consensus 81 ~--------------~~~~~~~~~~~~~d~llFG~Es~GLp~e~l~~~~~~~~i~IPm~~~~rSLNLs~AvaIvlYEa~R 146 (157)
T PRK10358 81 K--------------GTPAHSAVSYQDGDYLMFGPETRGLPASILDALPAEQKIRIPMVPDSRSMNLSNAVSVVVYEAWR 146 (157)
T ss_pred C--------------CCCCCHHCCCCCCCEEEECCCCCCCCHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 7--------------78761002357898899777678989999951777749983089798514299999999999998
Q ss_pred HHCCCC
Q ss_conf 621366
Q gi|254780904|r 171 NSIVSS 176 (268)
Q Consensus 171 ~~~~~~ 176 (268)
T Consensus 147 Q~~f~g 152 (157)
T PRK10358 147 QLGYPG 152 (157)
T ss_pred HCCCCC
T ss_conf 369986