HHsearch alignment for GI: 254780904 and conserved domain: PRK10433
>PRK10433 putative RNA methyltransferase; Provisional.
Probab=100.00 E-value=0 Score=415.83 Aligned_cols=227 Identities=29% Similarity=0.410 Sum_probs=202.3
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCCEEEECC
Q ss_conf 96899942888547999999999719980498088889999999998531013444200137789984125531012011
Q gi|254780904|r 14 GPVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHFIYATTAR 93 (268)
Q Consensus 14 ~~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 93 (268)
T Consensus 2 ~i~iVLvep~~p~NIGa~ARaMkN~G~~~L~LV~P~~~-~~~~a~~~A~gA~diL~~a~v~~sL~eAl~d~~~vvgtTaR 80 (228)
T PRK10433 2 RLTIILVAPARAENIGAAARAMKTMGFSELRIVDSQAH-LEPAARWVAHGSGDILDNIEVFDTLAEALHDVDFTVATTAR 80 (228)
T ss_pred EEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEECCCCC-CCHHHHHHHCCHHHHHHHCCCCCCHHHHHHCCCEEEEECCC
T ss_conf 69999967999751999999997289981699799999-98889998347399997373337799998548989996456
Q ss_pred CCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 22343034124203566655311588169999458884243100012322204767873410168899999999999621
Q gi|254780904|r 94 NRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIISFPVNPLFPSLNISQAVLLMVWECMENSI 173 (268)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v~IPt~~~~~SLNLS~AvaIvlYEl~r~~~ 173 (268)
T Consensus 81 ~r~~~~~~~~p~~~~~~~~~~~~~~~~valvFG~E~~GLsneEl~~C~~~~~IPt~~~y~SLNLaqAV~i~~YEl~~~~~ 160 (228)
T PRK10433 81 SRAKYHYYATPAELVPLLEEKSSWMSHAALVFGREDSGLTNEELALADVLTGVPMAADYPSLNLGQAVMVYCYQLAGLMQ 160 (228)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 46688886899999999997323478479998886689898999867978985589998532199999999999987555
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 3665444333334688889999999999998728998754389999999998631699989999999999999984103
Q gi|254780904|r 174 VSSEKNVKEQNTPATKGELLSFLDYLEISLEERGYFRPVEKKKKMLDDLYSIFIRPELMREEVFLLRGIVSTLDKFSRQ 252 (268)
Q Consensus 174 ~~~~~~~~~~~~~a~~~~l~~~~~~l~~~l~~~~f~~~~~~~~~~~~~lrrl~~R~~l~~~E~~~L~Gil~~l~~~~~~ 252 (268)
T Consensus 161 ~~-----~~~~~~a~~~~~e~l~~hl~~~L~~igf~~~~~~~~~l~~rl~r------L~~rEv~iLrGil~~iek~l~k 228 (228)
T PRK10433 161 QP-----AKSDTTADEHQLQALRQRVMELLTTLGVADDEKLVDWLQQRLGL------LEQRDTAMLHRLLHDIEKKLTK 228 (228)
T ss_pred CC-----CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH------CCHHHHHHHHHHHHHHHHHHCC
T ss_conf 78-----77888899999999999999999985999864678999999876------7088999999999999987349