HHsearch alignment for GI: 254780904 and conserved domain: PRK11181
>PRK11181 23S rRNA (guanosine-2'-O-)-methyltransferase; Provisional.
Probab=99.98 E-value=3.4e-32 Score=222.36 Aligned_cols=153 Identities=18% Similarity=0.168 Sum_probs=121.0
Q ss_pred CCCCC-CEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCCE
Q ss_conf 13489-68999428885479999999997199804980888899999999985310134442001377899841255310
Q gi|254780904|r 10 NSAKG-PVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHFIY 88 (268)
Q Consensus 10 ~~~~~-~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~~ 88 (268)
T Consensus 90 ~~~~~~lil~LD~I~DP~NlGaIiRsA~afGv~~vil~~~~~~~~~~~v~k~S~Ga~~~~pi~~~~n-l~~~l~~lk~-- 166 (244)
T PRK11181 90 ASTEQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLTATAKKVACGAAETVPLIRVTN-LARTMRMLQE-- 166 (244)
T ss_pred HCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHCHHHCCCEEEECC-HHHHHHHHHH--
T ss_conf 3578987999818878738999999999819989997899778542588887414232188169589-9999999886--
Q ss_pred EEECCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 12011223430341242035666553115881699994588842431000123222047678734101688999999999
Q gi|254780904|r 89 ATTARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIISFPVNPLFPSLNISQAVLLMVWEC 168 (268)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v~IPt~~~~~SLNLS~AvaIvlYEl 168 (268)
T Consensus 167 -------~g~~i~g~~-~~~~~~~~~~~~~~~~alvlGsE~~Gl~~~~~~~~d~~v~Ip~~g~~~SLNVsvAa~I~lyE~ 238 (244)
T PRK11181 167 -------KNVWIVGTA-GEADHTLYQSKLTGPLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 (244)
T ss_pred -------CCEEEEEEC-CCCCCCCCHHCCCCCEEEEECCCCCCCCHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHH
T ss_conf -------596999524-666766410105787699987776665899997599899807999985587999999999999
Q ss_pred HHHHC
Q ss_conf 99621
Q gi|254780904|r 169 MENSI 173 (268)
Q Consensus 169 ~r~~~ 173 (268)
T Consensus 239 ~RQR~ 243 (244)
T PRK11181 239 VRQRL 243 (244)
T ss_pred HHCCC
T ss_conf 86505