HHsearch alignment for GI: 254780904 and conserved domain: pfam09936
>pfam09936 DUF2168 Uncharacterized protein conserved in bacteria (DUF2168). This domain, found in various hypothetical prokaryotic proteins, has no known function. It is also found in a few prokaryotic tRNA (guanine-N(1)-)-methyltransferases.
Probab=98.29 E-value=1.3e-06 Score=61.44 Aligned_cols=135 Identities=23% Similarity=0.333 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHH------HHHC------CCCCCCHHCCCCHHHHHHCC-------CCC
Q ss_conf 7999999999719980498088889999999998------5310------13444200137789984125-------531
Q gi|254780904|r 27 NIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSS------SANA------DCVIDSVRVFSNLKEAIADL-------HFI 87 (268)
Q Consensus 27 NiGaiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~------a~~a------~~~~~~~~~~~~~~~a~~~~-------~~~ 87 (268)
T Consensus 29 DiHDIAR~~rTYgv~~yyiVtPl~~Q~-~l~~ril~hW~~G~G~~~NP~R~eAl~~v~~~~sle~ai~~i~~~~G~~p~v 107 (185)
T pfam09936 29 DIHDIARSARTYGVGRYYIVTPLEAQQ-ALVERILAHWQEGYGGEYNPDRKEALSLVKVVSSLEEAIEDIEKRTGQRPLI 107 (185)
T ss_pred CHHHHHHHHHCCCCCCEEEECCHHHHH-HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEE
T ss_conf 477754555004776679956019999-9999999873259786669678999857300602999999999961999779
Q ss_pred EEEECCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEE-CCCCCCCCCHHHHHHHHHHHH
Q ss_conf 0120112234303412420356665531158816999945888424310001232220-476787341016889999999
Q gi|254780904|r 88 YATTARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIIS-FPVNPLFPSLNISQAVLLMVW 166 (268)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v~-IPt~~~~~SLNLS~AvaIvlY 166 (268)
T Consensus 108 vaTsAr~~~~~is---~~~lr-~~i--~~~~~P~LllFGT-GwGL~~e~~~~~D~iLePI~g~~~yNHLSVRsAaAIilD 180 (185)
T pfam09936 108 VATSARKRPNTIS---YEELR-KMI--QEREKPVLLLFGT-GWGLAPEVLEQADYVLEPIRGAGDYNHLSVRSAAAIILD 180 (185)
T ss_pred EEECCCCCCCCCC---HHHHH-HHH--HCCCCCEEEEECC-CCCCCHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 9804756899739---99999-998--4458818999658-768779999746866705636999762049999999999
Q ss_pred HHH
Q ss_conf 999
Q gi|254780904|r 167 ECM 169 (268)
Q Consensus 167 El~ 169 (268)
T Consensus 181 RLl 183 (185)
T pfam09936 181 RLL 183 (185)
T ss_pred HHH
T ss_conf 870