HHsearch alignment of GI: 254780904 and MMDB domain: 1k3r_A_1-84_161-268
>1k3r_A (A:1-84,A:161-268) Conserved protein MT0001; beta barrel, structural genomics, PSI, protein structure initiative; 2.30A {Methanothermobacterthermautotrophicus}
Probab=94.38 E-value=0.33 Score=27.00 Aligned_cols=143 Identities=13% Similarity=0.126 Sum_probs=81.5
Q ss_pred EEECCCCCC----HHHHHHHHHHHCCCCEEEECCCCCCCCCHH------------HHHHHH--------HC-CCCCCCHH
Q ss_conf 994288854----799999999971998049808888999999------------999853--------10-13444200
Q gi|254780904|r 18 ILVDPQLGE----NIGMVARAMWNFNLTQLRLVNPRDGWPSEK------------ARSSSA--------NA-DCVIDSVR 72 (268)
Q Consensus 18 VLv~p~~p~----NiGaiaRa~~~fG~~~L~lv~P~~~~~~~~------------a~~~a~--------~a-~~~~~~~~ 72 (268)
||.+.+++. -+|-|||+|.-|+++.+++-+........- -.+... .+ .+......
T Consensus 14 il~~~~~~~~~t~~~g~IARaa~if~Vdeivvy~d~~~~~~~~l~~iL~YletP~YLRk~lfp~~~~Lk~a~YWGy~Vr~ 93 (192)
T 1k3r_A 14 LTAETGDLKIKTYKVVLIARAASIFGVKRIVIYHDDADGEARFIRDILTYMDTPQYLRRKVFPIMRELKHVRYWGYEVLD 93 (192)
T ss_dssp TTTTCCCHHHHHHHHHHHHHHHHHTTCCEEEEEECSSCCCHHHHHHHHHHHHSCHHHHHHHCCCCGGGGGGSCCCCEEEE
T ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEECCCCEEEEE
T ss_conf 95668998999999999999998226667999758997666899999888528887887536898563230667769997
Q ss_pred CCCCHHHHHHCCC--CCEEEECCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCC
Q ss_conf 1377899841255--31012011223430341242035666553115881699994588842431000123222047678
Q gi|254780904|r 73 VFSNLKEAIADLH--FIYATTARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIISFPVNP 150 (268)
Q Consensus 73 ~~~~~~~a~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v~IPt~~ 150 (268)
...++.++.+.|. ..++|+.+..... .............+.+.+|||.=..||.....+. ++-++|-.
T Consensus 94 ~~~sL~~v~~~~~~dl~IgTS~~G~~i~-------~~~~~l~~~~~~~~~~lvvFGgP~~Gl~~~lfD~--~iNt~P~Q- 163 (192)
T 1k3r_A 94 TRRNLAESLKTVGADVVVATSRNASPIT-------SILDEVKTRMRGAREAAILFGGPYKGLPEIDADI--WVNTLPGQ- 163 (192)
T ss_dssp EEEEHHHHHHHHCCSEEEEECTTSCBTT-------TSHHHHHHHHTTCSEEEEECCCSSSCCCSCCCSE--EEBSSTTC-
T ss_pred EECCHHHCCCCCCCCEEEEECCCCCCCH-------HHCCCCCCCCCCCCCEEEEECCCCCCCHHHHCCE--EEECCCCC-
T ss_conf 6231765631369985999799988520-------1012212345678708999898656874342684--89738998-
Q ss_pred CCCCHHHHHHHHHHHHHHHH
Q ss_conf 73410168899999999999
Q gi|254780904|r 151 LFPSLNISQAVLLMVWECME 170 (268)
Q Consensus 151 ~~~SLNLS~AvaIvlYEl~r 170 (268)
.....=.=.|+-|.|-.+.-
T Consensus 164 gsrTIRTEEAi~itLa~L~~ 183 (192)
T 1k3r_A 164 CTETVRTEEAVLATLSVFNM 183 (192)
T ss_dssp SSSCCCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHH
T ss_conf 87666089999999999982