HHsearch alignment of GI: 254780904 and MMDB domain: 3ic6_A_1-201
>3ic6_A (A:1-201) Putative methylase family protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 2.59A {Neisseria gonorrhoeae fa 1090}
Probab=100.00 E-value=1.8e-35 Score=242.51 Aligned_cols=172 Identities=28% Similarity=0.381 Sum_probs=154.9
Q ss_pred HHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCC-------------------CCCCCHHHHHHHHHCCC
Q ss_conf 55321348968999428885479999999997199804980888-------------------89999999998531013
Q gi|254780904|r 6 PQLQNSAKGPVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPR-------------------DGWPSEKARSSSANADC 66 (268)
Q Consensus 6 ~~l~~~~~~~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~-------------------~~~~~~~a~~~a~~a~~ 66 (268)
+.+......++|||+++++|+|+|+|+|+|++||++.++|++|+ .+++++++++.|+|+.+
T Consensus 9 ~~~~~~~~~~~ivld~v~~p~NiG~i~Rsa~afGv~~i~lv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~a~ga~~ 88 (201)
T 3ic6_A 9 PALPDYLGNIRIILTRTSHPANIGSAARAXKTXGLHRLTIVTPNLXATPXTENPPVFNPDDVQSFALPEESFILASGAAD 88 (201)
T ss_dssp CCCCGGGGGEEEEEESCCCHHHHHHHHHHHHHTTCCCEEEESCCCCCBTTBSSCCCCCTTCGGGCCCCHHHHHHHGGGHH
T ss_pred CCCHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHH
T ss_conf 23200205828999379888719999999998599869997887787534655431045321245566899999467698
Q ss_pred CCCCHHCCCCHHHHHHCCCCCEEEECCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEC
Q ss_conf 44420013778998412553101201122343034124203566655311588169999458884243100012322204
Q gi|254780904|r 67 VIDSVRVFSNLKEAIADLHFIYATTARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIISF 146 (268)
Q Consensus 67 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v~I 146 (268)
.+.........+.+.........+..........................+.++++||||+|++|||+++++.||..+.|
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvlG~E~~Gls~~~l~~~d~~v~I 168 (201)
T 3ic6_A 89 VLHNAEIVATLDEALADTTIACALTSRRREITAPLQTPRDLVPELLQAANRGEKVALVFGNETFGLSIEEVRACNRLXTI 168 (201)
T ss_dssp HHHTCEEESCHHHHHTTEEEEEEECCSCC--CCCCBCHHHHHHHHHHHHHTTCEEEEEECBTTTBCCHHHHHTCSEEECC
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHEEC
T ss_conf 87665401239999975122102222100243332252100101222104787347876765577216899864222404
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 7678734101688999999999996213665
Q gi|254780904|r 147 PVNPLFPSLNISQAVLLMVWECMENSIVSSE 177 (268)
Q Consensus 147 Pt~~~~~SLNLS~AvaIvlYEl~r~~~~~~~ 177 (268)
||.+.++|||||+|++|+|||++||...+..
T Consensus 169 P~~g~~~SLNvs~A~aI~l~e~~rq~~~~~~ 199 (201)
T 3ic6_A 169 NGNPDYFSLNLAQAVQVVCYEIFSQTDSPXT 199 (201)
T ss_dssp CCCTTCCCCCHHHHHHHHHHHHHHTTTSCCC
T ss_pred CCCCCCCCEEHHHHHHHHHHHHHHHHCCCCC
T ss_conf 6789988670999999999999996167665