HHsearch alignment of GI: 254780904 and MMDB domain: 3kty_A_
>3kty_A (A:) Probable methyltransferase; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.30A {Bordetella pertussis}
Probab=100.00 E-value=3.8e-34 Score=234.27 Aligned_cols=166 Identities=28% Similarity=0.348 Sum_probs=143.8
Q ss_pred HHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCC--CCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCC
Q ss_conf 532134896899942888547999999999719980498088889--999999998531013444200137789984125
Q gi|254780904|r 7 QLQNSAKGPVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDG--WPSEKARSSSANADCVIDSVRVFSNLKEAIADL 84 (268)
Q Consensus 7 ~l~~~~~~~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~--~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~ 84 (268)
......+...|||++|++|+|+|+|+|+|++||++++++++|+++ ++++++.+.|+|+.+.+.....+.++++++.++
T Consensus 3 ~~~~~~~~~~vvl~~v~~p~NiG~i~R~a~~fG~~~i~l~~~~~~~~~~~~~~~r~s~g~~~~~~~~~~~~~~~~~l~~~ 82 (173)
T 3kty_A 3 AXTQAFSRVRFIXTQPSHPGNVGSAARAIKTXGFGELVLVAPRFPDXTAQPEAVALASGALDVLERAAVHDTLEEALAPV 82 (173)
T ss_dssp HHHHHHTTEEEEEESCCCHHHHHHHHHHHHHTTCCCEEEESCSSTTGGGSHHHHHHHTTCHHHHHTCEEESCHHHHHTTC
T ss_pred HHHHHHCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCCCCEEEEEEEEECCHHHHHHHHC
T ss_conf 11241386599992798987499999999982998899989977777887889873387604544421033299998520
Q ss_pred CCCEEEECCCCCCCEE--EECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHH
Q ss_conf 5310120112234303--41242035666553115881699994588842431000123222047678734101688999
Q gi|254780904|r 85 HFIYATTARNRNNFKS--VLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIISFPVNPLFPSLNISQAVL 162 (268)
Q Consensus 85 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v~IPt~~~~~SLNLS~Ava 162 (268)
.....+.......... ..................++++||||+|++|||+++++.||..+.|||.+.++|||||+|++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~G~E~~Gls~~~l~~~d~~v~IP~~g~~~SLNvs~A~a 162 (173)
T 3kty_A 83 TLAFALTTRVRDLGPPPCDIREAAGLARRHLDDTEAGVVAIVLGTERAGLTNAQIELCHRICHIPANPQYSSLNVAQALQ 162 (173)
T ss_dssp SEEEEEECC-----CCCEEHHHHHHHHHHHHHHSSSCCEEEEECCCC-CCCHHHHHTSSEEEECCCCSTTCCCCHHHHHH
T ss_pred CCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCEEEEECCCCCCCCEEHHHHHH
T ss_conf 22210000012233432322343322233333214676289977756788989997479799941898998267899999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999962
Q gi|254780904|r 163 LMVWECMENS 172 (268)
Q Consensus 163 IvlYEl~r~~ 172 (268)
|+|||++||.
T Consensus 163 I~l~e~~rq~ 172 (173)
T 3kty_A 163 LAAWELRYAL 172 (173)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
T ss_conf 9999999975