HHsearch results for GI: 254780904 and protein with PDBid: 1x7o_A
>1x7o_A Avirb, rRNA methyltransferase; SPOU, C-terminal knot, seMet; 2.37A {Streptomyces viridochromogenes} PDB: 1x7p_A*
Probab=100.00 E-value=1.7e-35 Score=241.77 Aligned_cols=167 Identities=18% Similarity=0.121 Sum_probs=125.8
Q ss_pred HHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCC
Q ss_conf 25532134896899942888547999999999719980498088889999999998531013444200137789984125
Q gi|254780904|r 5 APQLQNSAKGPVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADL 84 (268)
Q Consensus 5 ~~~l~~~~~~~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~ 84 (268)
+..+......++|||++++||||+|+|+|+|.+||++.+++.+++++++++++++.++|+.+.+....+.+ +.++...+
T Consensus 117 l~~l~~~~~~~~lvLd~i~dPgNlGaIiRta~afG~~~vil~~~~~~~~~~~~~ras~Ga~~~~~~~~~~~-~~~~~~~l 195 (287)
T 1x7o_A 117 LDRIPVREDFLGVLFDRPTSPGNIGSIIRSADALGAHGLIVAGHAADVYDPKSVRSSTGSLFSLPAVRVPS-PGEVMDWV 195 (287)
T ss_dssp GGGSCCCTTCEEEEEESCSCHHHHHHHHHHHHHTTCCEEEEESSSSCTTSHHHHHHTTTGGGTSCEEEESS-HHHHHHHH
T ss_pred HHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEECCCHHHHCCEEEEEH-HHHHHHHH
T ss_conf 65740458977999966877655899999888559876999730344444300000102132110489810-46777765
Q ss_pred CCCEEEECCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHH
Q ss_conf 53101201122343034124203566655311588169999458884243100012322204767873410168899999
Q gi|254780904|r 85 HFIYATTARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIISFPVNPLFPSLNISQAVLLM 164 (268)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v~IPt~~~~~SLNLS~AvaIv 164 (268)
.... ..................+......++++||||+|++|||++.++.||+.++|||.+.++|||||+|++|+
T Consensus 196 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~G~E~~Gls~~~~~~~d~~v~IPm~g~~eSLNvsvA~~I~ 270 (287)
T 1x7o_A 196 EARR-----AAGTPIVLVGTDEHGDCDVFDFDFTQPTLLLIGNETAGLSNAWRTLCDYTVSIPMAGSASSLNAANAATAI 270 (287)
T ss_dssp HHHH-----HHTCCCEEEEECTTCSEEGGGSCTTSCEEEEECBTTTBSCHHHHHHCSEEEECCCSSSSCCCCHHHHHHHH
T ss_pred HHHH-----CCCCCEEEECCCCCCCCCCHHHCCCCCEEEEECCCCCCCCHHHHHHCCEEEEECCCCCCCEEHHHHHHHHH
T ss_conf 5554-----04875687412000243211120368629998888878899999858989998999999712299999999
Q ss_pred HHHHHHHHCCCCC
Q ss_conf 9999996213665
Q gi|254780904|r 165 VWECMENSIVSSE 177 (268)
Q Consensus 165 lYEl~r~~~~~~~ 177 (268)
|||++||+.....
T Consensus 271 lyE~~RqR~~~~~ 283 (287)
T 1x7o_A 271 LYEAVRQRISGRT 283 (287)
T ss_dssp HHHHHHHHSSCCC
T ss_pred HHHHHHHHHCCCC
T ss_conf 9999987853899