Probab=100.00 E-value=3.3e-34 Score=232.14 Aligned_cols=175 Identities=19% Similarity=0.267 Sum_probs=123.3
Q ss_pred HCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCHHHHHHCCCCCE
Q ss_conf 21348968999428885479999999997199804980888899999999985310134442001377899841255310
Q gi|254780904|r 9 QNSAKGPVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANADCVIDSVRVFSNLKEAIADLHFIY 88 (268)
Q Consensus 9 ~~~~~~~~vVLv~p~~p~NiGaiaRa~~~fG~~~L~lv~P~~~~~~~~a~~~a~~a~~~~~~~~~~~~~~~a~~~~~~~~ 88 (268)
...+...+|||+++++|+|||+|+|+|++||++++++++|.+++++.. +.++++ ........+.+..+++..+...
T Consensus 17 ~~~~~~~~vvLd~i~~p~NiG~IiRta~afG~~~v~l~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~l~~l~~~- 92 (191)
T d1v2xa_ 17 RRRQPDLTVLLENVHKPHNLSAILRTCDAVGVLEAHAVNPTGGVPTFN--ETSGGS-HKWVYLRVHPDLHEAFRFLKER- 92 (191)
T ss_dssp TTCBTTEEEEEESCCCHHHHHHHHHHHHHHTBSEEEEESGGGGSCCCC--SSCSSG-GGTSEEEEESSHHHHHHHHHHT-
T ss_pred HCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE--ECCHHH-HEEECCCCCCHHHHHHHHHHHC-
T ss_conf 657999799995798875489999999851223201248864530110--000112-0120122233025678888636-
Q ss_pred EEECCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 12011223430341242035666553115881699994588842431000123222047678734101688999999999
Q gi|254780904|r 89 ATTARNRNNFKSVLAPKEAAIVLNERIFSGQNVGIIFGRERWGLTNEEIALSNAIISFPVNPLFPSLNISQAVLLMVWEC 168 (268)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~valVFG~E~~GLs~eel~~cd~~v~IPt~~~~~SLNLS~AvaIvlYEl 168 (268)
....................+.++++||||+|+.|||+++++.||..|+|||.+.++|||||+|++|+|||+
T Consensus 93 --------~~~i~~~~~~~~~~~~~~~~~~~~~~lV~G~E~~Gls~~~l~~~d~~v~IPm~~~~~SLNvsvAa~I~lyE~ 164 (191)
T d1v2xa_ 93 --------GFTVYATALREDARDFREVDYTKPTAVLFGAEKWGVSEEALALADGAIKIPMLGMVQSLNVSVAAAVILFEA 164 (191)
T ss_dssp --------TCEEEEECCCTTSEEGGGSCTTSSEEEEECBTTTBSCHHHHHHSSEEEECCCCSSCSCCCHHHHHHHHHHHH
T ss_pred --------CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHH
T ss_conf --------874211111122332211247888089973666536599998378679968999966332999999999999
Q ss_pred HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 9962136654443333346888899999999
Q gi|254780904|r 169 MENSIVSSEKNVKEQNTPATKGELLSFLDYL 199 (268)
Q Consensus 169 ~r~~~~~~~~~~~~~~~~a~~~~l~~~~~~l 199 (268)
+||......... +....++++.+++.|
T Consensus 165 ~rq~~~~g~~~~----~~~~~~~~~~l~~~~ 191 (191)
T d1v2xa_ 165 QRQRLKAGLYDR----PRLDPELYQKVLADW 191 (191)
T ss_dssp HHHHHHHTGGGS----CCSCHHHHHHHHHHC
T ss_pred HHHHHHCCCCCC----CCCCHHHHHHHHHCC
T ss_conf 999986568887----789999999998349
class: Alpha and beta proteins (a/b)
fold: alpha/beta knot
superfamily: alpha/beta knot
family: SpoU-like RNA 2'-O ribose methyltransferase
domain: tRNA (Gm18) methyltransferase TrmH
species: Thermus thermophilus [TaxId: 274]