RPSBLAST alignment of GI: 254780904 and protein with PDBid: 2ha8
>2ha8_A TAR (HIV-1) RNA loop binding protein; methyltransferase, structural genomics, structural genomics consortium, SGC, RNA binding protein; HET: SAH; 1.60A {Homo sapiens} Length = 184
Score = 56.5 bits (135), Expect = 7e-09
Identities = 24/165 (14%), Positives = 52/165 (31%), Gaps = 9/165 (5%)
Query: 5 APQLQNSAKGPVIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANA 64
A +L S +++ N+G + R F + L + + + + S +
Sbjct: 17 AARLGKSISRLIVVASLIDKPTNLGGLCRTCEVFGASVLVVGSLQCISDKQFQHLSVSAE 76
Query: 65 DCVIDSVRVFSNLKEAIADLHFIYATTARNRNNFKSVLAPKEAAIVLNERIFSGQNVGII 124
+ L + + T K + + + ++
Sbjct: 77 QWLPLVEVKPPQLIDYLQQKKTEGYTIIGVEQTAK---------SLDLTQYCFPEKSLLL 127
Query: 125 FGRERWGLTNEEIALSNAIISFPVNPLFPSLNISQAVLLMVWECM 169
G ER G+ I + + P + SLN+ + L++WE
Sbjct: 128 LGNEREGIPANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYT 172