RPSBLAST alignment of GI: 254780904 and SCOP domain: d1gz0a1

Alignment

 Score = 68.3 bits (166), Expect = 6e-13
 Identities = 29/165 (17%), Positives = 56/165 (33%), Gaps = 12/165 (7%)

Query: 6   PQLQNSAKGP-VIILVDPQLGENIGMVARAMWNFNLTQLRLVNPRDGWPSEKARSSSANA 64
           P L  S   P ++IL       N+G   R+     +  + +   R    +  A+  +  A
Sbjct: 9   PDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGA 68

Query: 65  DCVIDSVRVFSNLKEAIADLHFIYATTARNRNNFKSVLAPKEAAIVLNERIFSGQNVGII 124
              +  +R  +NL   +  L                 L           +      + ++
Sbjct: 69  AESVPLIR-VTNLARTMRMLQEENIWIVGTAGEADHTL----------YQSKMTGRLALV 117

Query: 125 FGRERWGLTNEEIALSNAIISFPVNPLFPSLNISQAVLLMVWECM 169
            G E  G+        + +IS P+     SLN+S A  + ++E +
Sbjct: 118 MGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 162

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: alpha/beta knot
superfamily: alpha/beta knot
family: SpoU-like RNA 2'-O ribose methyltransferase
domain: RlmB, C-terminal domain
species: Escherichia coli [TaxId: 562]