HHsearch alignment for GI: 254780905 and conserved domain: COG0796

>COG0796 MurI Glutamate racemase [Cell envelope biogenesis, outer membrane].
Probab=100.00  E-value=0  Score=540.89  Aligned_cols=254  Identities=32%  Similarity=0.502  Sum_probs=237.0

Q ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHH
Q ss_conf             34887079877910589999999968999899994157898989898999999999999986216984899717620263
Q gi|254780905|r   11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTL   90 (271)
Q Consensus        11 ~~~~~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACNTasa~   90 (271)
T Consensus         3 ~~~~~IgvFDSGVGGLsVlrei~~~LP~e~~iY~~D~a~~PYG~ks~e~I~~~~~~i~~~l~~~~-ik~lVIACNTASa~   81 (269)
T COG0796           3 EPQPPIGVFDSGVGGLSVLREIRRQLPDEDIIYVGDTARFPYGEKSEEEIRERTLEIVDFLLERG-IKALVIACNTASAV   81 (269)
T ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCC-CCEEEEECCHHHHH
T ss_conf             66681899978987089999999978998689981477899998999999999999999999729-98899966517899


Q ss_pred             HHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEECHHHHCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCC
Q ss_conf             38999862577765445479999998407883299850677317016899851278857977056422578776642677
Q gi|254780905|r   91 IKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK  170 (271)
Q Consensus        91 ~~~~l~~~~~~ipiigii~~~~~a~~~~~~~~VgiLAT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~lv~~iE~~~~~~~  170 (271)
T Consensus        82 al~~LR~~~-~iPVvGviPaik~A~~~t~~~~IgViaT~~Tvks~~y~~~i~~~~~~~~V~~la~p~lV~lvE~g~~~~~  160 (269)
T COG0796          82 ALEDLREKF-DIPVVGVIPAIKPAVALTRNGRIGVIATPATVKSNAYRDLIARFAPDCEVESLACPELVPLVEEGIRGGP  160 (269)
T ss_pred             HHHHHHHHC-CCCEEEECCCHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCH
T ss_conf             999999867-9998995315499997313875899955112401899999998589987997038401888845642578


Q ss_pred             CCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCC--CE
Q ss_conf             6979999999998465410588789980563588999999864899789828589999999998642733457788--77
Q gi|254780905|r  171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DH  248 (271)
Q Consensus       171 ~~~~~~~~~l~~~l~~~~~~~~D~iILGCTHyPll~~~i~~~~~~~v~iIDpa~~va~~~~~~L~~~~~~~~~~~~--~~  248 (271)
T Consensus       161 ----~~~~~l~~~l~~~~~~~~DtlVLGCTHyPll~~~i~~~~~~~v~lids~~~~a~~~~~~L~~~~~~~~~~~~~~~~  236 (269)
T COG0796         161 ----VALEVLKEYLPPLQEAGPDTLVLGCTHYPLLKPEIQQVLGEHVALIDSGAETARRLARLLSPEGLLAKGADGGPDH  236 (269)
T ss_pred             ----HHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHCHHHHCCCCCCCCCCE
T ss_conf             ----8999999984004306998899917480878999999827895687789999999999707232035555788655


Q ss_pred             EEEECCCHHHHHHHHHHHCCCC
Q ss_conf             9996699799999999856888
Q gi|254780905|r  249 ALFLSGKPDIAMRRLMQGFGLK  270 (271)
Q Consensus       249 ~f~~T~~~~~~~~~~~~~~G~~  270 (271)
T Consensus       237 ~f~~tg~~~~~~~~~~~~l~~~  258 (269)
T COG0796         237 RFFTTGDPDEFEQLLKRWLGLG  258 (269)
T ss_pred             EEEECCCCHHHHHHHHHHHCCC
T ss_conf             9997699589999999985457