HHsearch alignment for GI: 254780905 and conserved domain: TIGR00067
>TIGR00067 glut_race glutamate racemase; InterPro: IPR004391 Glutamate racemase (5.1.1.3 from EC) provides the (R)-glutamic acid required for cell wall biosynthesis. It converts L-glutamate to D-glutamate during peptidoglycan biosynthesis. The most closely related proteins differing in function are aspartate racemases.; GO: 0008881 glutamate racemase activity, 0009252 peptidoglycan biosynthetic process.
Probab=100.00 E-value=0 Score=509.57 Aligned_cols=251 Identities=25% Similarity=0.399 Sum_probs=235.3
Q ss_pred CCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHH
Q ss_conf 87079877910589999999968999899994157898989898999999999999986216984899717620263389
Q gi|254780905|r 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKD 93 (271)
Q Consensus 14 ~~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACNTasa~~~~ 93 (271)
T Consensus 1 PtIgvFDSGvGGLsV~~ei~~~lp~~~yiY~~D~~~~PYG~ks~~~i~e~v~~~~~~l~e~~~ik~lv~ACNTasa~ale 80 (262)
T TIGR00067 1 PTIGVFDSGVGGLSVLKEILKQLPKEEYIYVGDTARVPYGEKSPEKILEYVLELLEFLKESYNIKLLVVACNTASAIALE 80 (262)
T ss_pred CEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHH
T ss_conf 93789876863578999999857897368861423496688855789999999999973414641556511156698899
Q ss_pred HHHHHCCCCCCCCCC-HHHHHHHHHCCC--CCEEEEECHHHHCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCC
Q ss_conf 998625777654454-799999984078--83299850677317016899851278857977056422578776642677
Q gi|254780905|r 94 ELRSTFPSMAFLGAV-PAIKQAAAYTQS--GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 (271)
Q Consensus 94 ~l~~~~~~ipiigii-~~~~~a~~~~~~--~~VgiLAT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~lv~~iE~~~~~~~ 170 (271)
T Consensus 81 ~lq~~f-~~PvvGVi~P~~~aa~~~~~~~~~~vlviaT~~T~~s~~~~~~~~~~~~d~~V~~LA~p~lV~l~E~~~~--- 156 (262)
T TIGR00067 81 DLQRNF-DFPVVGVIEPAVKAAIRLVKNKRKRVLVIATNATIKSNAYHEAVKEIANDLLVEQLACPELVPLVEEGEF--- 156 (262)
T ss_pred HHHHHC-CCCEEEEECCCHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHCC---
T ss_conf 998772-8987897666516888743401770588504467888899999986085023764157630377740024---
Q ss_pred CCHHHHHHHHHHHHHHHH--CCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEEC--HHHHHHHHHHHHHHCCCCCCCCC-
Q ss_conf 697999999999846541--0588789980563588999999864899789828--58999999999864273345778-
Q gi|254780905|r 171 IKEDEIKKEIEGCFIEKE--GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN--SDSIARRARCLLPRINTHQTRVF- 245 (271)
Q Consensus 171 ~~~~~~~~~l~~~l~~~~--~~~~D~iILGCTHyPll~~~i~~~~~~~v~iIDp--a~~va~~~~~~L~~~~~~~~~~~- 245 (271)
T Consensus 157 -~~~~~~~~lk~~l~pl~~l~~~~d~vvLGCTHfp~L~~~i~~~l~~~v~l~~~PL~~~~~~~~~~~L~~~~~l~ks~~a 235 (262)
T TIGR00067 157 -EEDYALECLKAYLSPLLRLDTQIDTVVLGCTHFPLLKEEIEQYLGEHVRLVSSPLGVHTAKRLKKLLEHKGALKKSAIA 235 (262)
T ss_pred -CHHHHHHHHHHHCCCHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf -4158999999860526774289987997874347789999987178713227416789999999999872544478876
Q ss_pred -CCEEEEECCCH--HHHHHHHHHHCCC
Q ss_conf -87799966997--9999999985688
Q gi|254780905|r 246 -DDHALFLSGKP--DIAMRRLMQGFGL 269 (271)
Q Consensus 246 -~~~~f~~T~~~--~~~~~~~~~~~G~ 269 (271)
T Consensus 236 F~~~~F~~sg~~nl~~~~~~~~~~~~~ 262 (262)
T TIGR00067 236 FPDIEFLLSGTKNLTQFQELAKKWLGL 262 (262)
T ss_pred CHHHHHHCCCCHHHHHHHHHHHHHHCC
T ss_conf 212254405872368898888986059