HHsearch alignment of GI: 254780905 and MMDB domain: 2jfq_A_1-115_228-286
>2jfq_A (A:1-115,A:228-286) Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus}
Probab=100.00 E-value=7.9e-36 Score=258.15 Aligned_cols=100 Identities=27% Similarity=0.496 Sum_probs=93.2
Q ss_pred CCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
Q ss_conf 34463488707987791058999999996899989999415789898989899999999999998621698489971762
Q gi|254780905|r 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNT 86 (271)
Q Consensus 7 ~~~~~~~~~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACNT 86 (271)
+...+|++||||||||+|||||++++++++|+++++|+||++|+|||+||.++|.+++.+++++|. +.||++|||||||
T Consensus 16 ~~~~~~~~~IgifdsG~Ggltv~~~i~~~lp~~~~iy~~D~~~~Pyg~~s~~~i~~~~~~~~~~L~-~~g~~~iviaCNT 94 (174)
T 2jfq_A 16 PRGSHMNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKLM-EFDIKMLVIACNT 94 (174)
T ss_dssp -----CCSCEEEEESSSTTHHHHHHHHHHCTTCCEEEEECTTTCCCTTSCHHHHHHHHHHHHHHHT-TSCCSEEEECCHH
T ss_pred CCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH-HCCCCEEEEECCC
T ss_conf 875357998899968977799999999978999989994488898888999999999999999998-5488779981464
Q ss_pred CCHHHHHHHHHHCCCCCCCCCC
Q ss_conf 0263389998625777654454
Q gi|254780905|r 87 AFTLIKDELRSTFPSMAFLGAV 108 (271)
Q Consensus 87 asa~~~~~l~~~~~~ipiigii 108 (271)
||+++++.+|+++ ++|++||+
T Consensus 95 a~a~~l~~l~~~~-~iPii~~i 115 (174)
T 2jfq_A 95 ATAVALEYLQKTL-SISVIGVI 115 (174)
T ss_dssp HHHHHHHHHHHHC-SSEEEESH
T ss_pred HHHHHHHHHHHCC-CCCEEEEE
T ss_conf 8999999998518-99779864