HHsearch alignment of GI: 254780905 and MMDB domain: 2jfq_A_116-227
>2jfq_A (A:116-227) Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus}
Probab=99.90 E-value=3.2e-23 Score=174.29 Aligned_cols=112 Identities=18% Similarity=0.230 Sum_probs=102.9
Q ss_pred CHHHHHHHHHCCCCCEEEEECHHHHCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 47999999840788329985067731701689985127885797705642257877664267769799999999984654
Q gi|254780905|r 108 VPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 (271)
Q Consensus 108 i~~~~~a~~~~~~~~VgiLAT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~lv~~iE~~~~~~~~~~~~~~~~l~~~l~~~ 187 (271)
+|++++++..++.++||||||++|++|++|++.+++++.++.+...+|+.+|+.+|.+..+ ........++.++..+
T Consensus 1 epa~~~a~~~~~~k~VgilaT~~Ti~s~~y~~~l~~~~~~~~v~~~~~~~lv~~i~~~~~~---~~~~~~~~l~~~l~~l 77 (112)
T 2jfq_A 1 EPGARTAIMTTRNQNVLVLGTEGTIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYS---DPTITSIVIHQTLKRW 77 (112)
T ss_dssp HHHHHHHHHHCSSSEEEEEECHHHHHHTHHHHHHHHHCTTCEEEEEECTTHHHHHHTTCTT---CHHHHHHHHHHHHGGG
T ss_pred CHHHHHHHHHCCCCCEEEEEEHHHHHCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCC---CCHHHHHHHHHHHHHH
T ss_conf 3778999973355405999614466464789998722898648982352088899865128---8143499999988886
Q ss_pred HCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEEC
Q ss_conf 10588789980563588999999864899789828
Q gi|254780905|r 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222 (271)
Q Consensus 188 ~~~~~D~iILGCTHyPll~~~i~~~~~~~v~iIDp 222 (271)
..+++|++||||||||++.+.|++.+|+++++|||
T Consensus 78 ~~~~~d~iILgCTe~pli~~~~~~~l~~~v~~iDS 112 (112)
T 2jfq_A 78 RNSESDTVILGCTHYPLLYKPIYDYFGGKKTVISS 112 (112)
T ss_dssp TTCSCSEEEEESSSGGGGHHHHHHHTTTCSEEEEH
T ss_pred HCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEECC
T ss_conf 53688769965640355668999973999889897