HHsearch results for GI: 254780905 and protein with PDBid: 2eq5_A
>2eq5_A 228AA long hypothetical hydantoin racemase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.20A {Pyrococcus horikoshii OT3}
Probab=99.85 E-value=1.9e-20 Score=154.85 Aligned_cols=192 Identities=15% Similarity=0.178 Sum_probs=132.6
Q ss_pred HHHHHHCCCCCEE--EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCC
Q ss_conf 9999968999899--99415789898989899999999999998621698489971762026338999862577765445
Q gi|254780905|r 30 QKMRFLMPEYHFI--YVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA 107 (271)
Q Consensus 30 ~~l~~~lP~~~~i--Y~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACNTasa~~~~~l~~~~~~ipiigi 107 (271)
+-+...+|...+. .+.|.-...+|..+.+.......+.+.++ ++.|+|+|||||||++ +++.+|+.+ ++||+|+
T Consensus 28 r~~~~~~p~v~v~~~~ipd~p~~I~~~~~~~~~~p~l~~~~~~l-e~~g~DaivIaC~t~~--~l~~~r~~~-~iPVig~ 103 (228)
T 2eq5_A 28 RIIESAFPELKVVSRCIEDQPKGIYNEETEREAEPKIIRLAKEF-EREGVDAIIISCAADP--AVEKVRKLL-SIPVIGA 103 (228)
T ss_dssp HHHHHHCTTEEEEEEECSSCTTCCSSHHHHHHHHHHHHHHHHHH-HHTTCSEEEECSTTCT--THHHHHHHC-SSCEEEH
T ss_pred HHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HHCCCCEEEEECCCHH--HHHHHHHHC-CCCEECC
T ss_conf 88875489966997479999876778315766379999999999-8779989999068759--999999865-9985563
Q ss_pred CHHHHHHHHHCCCCCEEEEECHHHHCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 47999999840788329985067731701689985127885797705642257877664267769799999999984654
Q gi|254780905|r 108 VPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 (271)
Q Consensus 108 i~~~~~a~~~~~~~~VgiLAT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~lv~~iE~~~~~~~~~~~~~~~~l~~~l~~~ 187 (271)
.++...++... .+++|+++|..|.... +.+.+.... ....++......+.+. .+..+..+..++..+
T Consensus 104 ~ea~~~~a~~~-g~~~~vi~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~~~~~~------~~~~~~~l~~~~~~l 170 (228)
T 2eq5_A 104 GSSVSALALAY-GRRVGVLNLTEETPKV-IRSILGNNL-----IAEDHPSGVSNTLDLL------TDWGRREVINAAKRL 170 (228)
T ss_dssp HHHHHHHHHTT-CSSEEEECSSSCCCHH-HHHHHGGGE-----EEEECCTTCCSGGGGG------SHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-CCCCEEEECCCCHHHH-HHHHHHHHC-----CCCCCCCCEEECCCCC------CHHHHHHHHHHHHHH
T ss_conf 18899999983-8874475233003899-999998734-----4665553134211124------678999999999999
Q ss_pred HCCCCCEEEECCCCHHHH--HHHHHHHCCCCCEEEECHHHHHHHHHHHHHHCCCC
Q ss_conf 105887899805635889--99999864899789828589999999998642733
Q gi|254780905|r 188 EGKRTDVIVLACTHYPLI--VHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 (271)
Q Consensus 188 ~~~~~D~iILGCTHyPll--~~~i~~~~~~~v~iIDpa~~va~~~~~~L~~~~~~ 240 (271)
.++++|++||||||||++ ...+++.++ |++|||.++.++.+...+...+..
T Consensus 171 ~~~gadaiiLGCT~~~~~~~~~~l~~~~g--vpVIDp~~a~~~~a~~~l~~~~~~ 223 (228)
T 2eq5_A 171 KEKGVEVIALGCTGMSTIGIAPVLEEEVG--IPVIDPVIASGAVALHALKRREVK 223 (228)
T ss_dssp HHTTCSEEEECCTHHHHHTCHHHHHHHHS--SCEECHHHHHHHHHHHHHHTC---
T ss_pred HHCCCCEEEECCCCCHHHHHHHHHHCCCC--CEEECCHHHHHHHHHHHHHHHCCC
T ss_conf 86699889981787024555798730699--779866999999999997210145