HHsearch results for GI: 254780905 and protein with PDBid: 2eq5_A

>2eq5_A 228AA long hypothetical hydantoin racemase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.20A {Pyrococcus horikoshii OT3}
Probab=99.85  E-value=1.9e-20  Score=154.85  Aligned_cols=192  Identities=15%  Similarity=0.178  Sum_probs=132.6

Q ss_pred             HHHHHHCCCCCEE--EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCC
Q ss_conf             9999968999899--99415789898989899999999999998621698489971762026338999862577765445
Q gi|254780905|r   30 QKMRFLMPEYHFI--YVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA  107 (271)
Q Consensus        30 ~~l~~~lP~~~~i--Y~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACNTasa~~~~~l~~~~~~ipiigi  107 (271)
                      +-+...+|...+.  .+.|.-...+|..+.+.......+.+.++ ++.|+|+|||||||++  +++.+|+.+ ++||+|+
T Consensus        28 r~~~~~~p~v~v~~~~ipd~p~~I~~~~~~~~~~p~l~~~~~~l-e~~g~DaivIaC~t~~--~l~~~r~~~-~iPVig~  103 (228)
T 2eq5_A           28 RIIESAFPELKVVSRCIEDQPKGIYNEETEREAEPKIIRLAKEF-EREGVDAIIISCAADP--AVEKVRKLL-SIPVIGA  103 (228)
T ss_dssp             HHHHHHCTTEEEEEEECSSCTTCCSSHHHHHHHHHHHHHHHHHH-HHTTCSEEEECSTTCT--THHHHHHHC-SSCEEEH
T ss_pred             HHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HHCCCCEEEEECCCHH--HHHHHHHHC-CCCEECC
T ss_conf             88875489966997479999876778315766379999999999-8779989999068759--999999865-9985563


Q ss_pred             CHHHHHHHHHCCCCCEEEEECHHHHCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf             47999999840788329985067731701689985127885797705642257877664267769799999999984654
Q gi|254780905|r  108 VPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK  187 (271)
Q Consensus       108 i~~~~~a~~~~~~~~VgiLAT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~lv~~iE~~~~~~~~~~~~~~~~l~~~l~~~  187 (271)
                      .++...++... .+++|+++|..|.... +.+.+....     ....++......+.+.      .+..+..+..++..+
T Consensus       104 ~ea~~~~a~~~-g~~~~vi~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~~~~~~------~~~~~~~l~~~~~~l  170 (228)
T 2eq5_A          104 GSSVSALALAY-GRRVGVLNLTEETPKV-IRSILGNNL-----IAEDHPSGVSNTLDLL------TDWGRREVINAAKRL  170 (228)
T ss_dssp             HHHHHHHHHTT-CSSEEEECSSSCCCHH-HHHHHGGGE-----EEEECCTTCCSGGGGG------SHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH-CCCCEEEECCCCHHHH-HHHHHHHHC-----CCCCCCCCEEECCCCC------CHHHHHHHHHHHHHH
T ss_conf             18899999983-8874475233003899-999998734-----4665553134211124------678999999999999


Q ss_pred             HCCCCCEEEECCCCHHHH--HHHHHHHCCCCCEEEECHHHHHHHHHHHHHHCCCC
Q ss_conf             105887899805635889--99999864899789828589999999998642733
Q gi|254780905|r  188 EGKRTDVIVLACTHYPLI--VHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH  240 (271)
Q Consensus       188 ~~~~~D~iILGCTHyPll--~~~i~~~~~~~v~iIDpa~~va~~~~~~L~~~~~~  240 (271)
                      .++++|++||||||||++  ...+++.++  |++|||.++.++.+...+...+..
T Consensus       171 ~~~gadaiiLGCT~~~~~~~~~~l~~~~g--vpVIDp~~a~~~~a~~~l~~~~~~  223 (228)
T 2eq5_A          171 KEKGVEVIALGCTGMSTIGIAPVLEEEVG--IPVIDPVIASGAVALHALKRREVK  223 (228)
T ss_dssp             HHTTCSEEEECCTHHHHHTCHHHHHHHHS--SCEECHHHHHHHHHHHHHHTC---
T ss_pred             HHCCCCEEEECCCCCHHHHHHHHHHCCCC--CEEECCHHHHHHHHHHHHHHHCCC
T ss_conf             86699889981787024555798730699--779866999999999997210145