HHsearch results for GI: 254780905 and protein with PDBid: 3ist_A
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=100.00 E-value=0 Score=529.62 Aligned_cols=255 Identities=21% Similarity=0.334 Sum_probs=238.0
Q ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCH
Q ss_conf 63488707987791058999999996899989999415789898989899999999999998621698489971762026
Q gi|254780905|r 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFT 89 (271)
Q Consensus 10 ~~~~~~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACNTasa 89 (271)
..|++||||||||+|||||+++|++++|+++|+|+||++|+|||+||+++|++++.+++++|.+ .+|++|||||||||+
T Consensus 2 ~~m~~pIgvfDSGvGGLsvl~~l~~~lP~~~~iY~~D~~~~PYG~ks~~ei~~~~~~~~~~l~~-~~~~~iViACNTas~ 80 (269)
T 3ist_A 2 NAMKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEMTNFLVD-RGIKMLVIACNTATA 80 (269)
T ss_dssp CSSCCCEEEEESSSTTHHHHHHHHHHCTTCCEEEEECGGGCCCTTSCHHHHHHHHHHHHHHHHH-TTCSEEEECCHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH-CCCCEEEEECCCHHH
T ss_conf 9777968999589757999999999789999899944889998999999999999999999986-699989994685579
Q ss_pred HHHHHHHHHCCCCCCCCCC-HHHHHHHHHCCCCCEEEEECHHHHCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHC
Q ss_conf 3389998625777654454-799999984078832998506773170168998512788579770564225787766426
Q gi|254780905|r 90 LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG 168 (271)
Q Consensus 90 ~~~~~l~~~~~~ipiigii-~~~~~a~~~~~~~~VgiLAT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~lv~~iE~~~~~ 168 (271)
.+++.+|+++ .+|++||+ |+++.+...+++++||||||++|++|++|++++++++++++|..++|+.||++||++..+
T Consensus 81 ~al~~lr~~~-~ipiigvi~p~~k~a~~~~~~~~IgvlAT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~Lv~~IE~g~~~ 159 (269)
T 3ist_A 81 AALYDIREKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTLGTVESMAYPTALKGLNRRVEVDSLACPKFVSVVESGEYK 159 (269)
T ss_dssp HHHHHHHHHC-SSCEEESHHHHHHHHHHHCSSSEEEEEECHHHHHHTHHHHHHHHHCTTCEEEEEECHHHHHHHHTTCTT
T ss_pred HHHHHHHHHC-CCCEECCCCHHHHHHHHCCCCCEEEEEECHHHHHCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCC
T ss_conf 9999999757-997642662647889865688569999635453156779999841898249984567799999806668
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHCCCCCC-CCCCC
Q ss_conf 77697999999999846541058878998056358899999986489978982858999999999864273345-77887
Q gi|254780905|r 169 IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDD 247 (271)
Q Consensus 169 ~~~~~~~~~~~l~~~l~~~~~~~~D~iILGCTHyPll~~~i~~~~~~~v~iIDpa~~va~~~~~~L~~~~~~~~-~~~~~ 247 (271)
.+..+..++.++.++..+++|++|||||||||+++.|++++|+++++|||++++|++++++|.++++.+. ...++
T Consensus 160 ----~~~~~~~~~~~l~~~~~~~iD~lILGCTHyPll~~~i~~~l~~~v~iIDpa~~vA~~v~~~L~~~~ll~~~~~~~~ 235 (269)
T 3ist_A 160 ----SAIAKKVVAESLLPLKSTKIDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDATDEEIE 235 (269)
T ss_dssp ----SHHHHHHHHHHHGGGGGSCCCEEEECSTTGGGGHHHHHHHHCTTSEEECTHHHHHHHHHHHHHHTTCCCCCCCCCC
T ss_pred ----CHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf ----7889999999987650568887997476707777899987599989987789999999999986776555689977
Q ss_pred EEEEECCCHHHHHHHHHHHCCCC
Q ss_conf 79996699799999999856888
Q gi|254780905|r 248 HALFLSGKPDIAMRRLMQGFGLK 270 (271)
Q Consensus 248 ~~f~~T~~~~~~~~~~~~~~G~~ 270 (271)
.+||+||+++.|.+.+.+|||..
T Consensus 236 ~~f~~T~~~~~f~~~~~~~l~~~ 258 (269)
T 3ist_A 236 HRFFTTGSTQIFKDIAKDWLNMP 258 (269)
T ss_dssp CEEEESSCHHHHHHHHHHHHCCT
T ss_pred EEEEECCCHHHHHHHHHHHCCCC
T ss_conf 69998999899999999973999