Query gi|254780905|ref|YP_003065318.1| glutamate racemase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 271
No_of_seqs 152 out of 1399
Neff 7.0
Searched_HMMs 23785
Date Tue May 31 22:20:44 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780905.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zuw_A Glutamate racemase 1; ( 100.0 0 0 535.6 29.4 254 12-270 2-257 (272)
2 2dwu_A Glutamate racemase; iso 100.0 0 0 532.1 29.0 255 10-270 4-259 (276)
3 2gzm_A Glutamate racemase; enz 100.0 0 0 530.7 29.5 254 11-270 1-256 (267)
4 2jfq_A Glutamate racemase; cel 100.0 0 0 530.7 29.3 260 6-270 15-276 (286)
5 3ist_A Glutamate racemase; str 100.0 0 0 529.6 29.3 255 10-270 2-258 (269)
6 2vvt_A Glutamate racemase; iso 100.0 0 0 526.1 29.9 258 8-271 19-279 (290)
7 2oho_A Glutamate racemase; iso 100.0 0 0 524.4 28.4 251 13-270 12-265 (273)
8 2jfn_A Glutamate racemase; cel 100.0 0 0 516.2 27.6 252 15-270 23-276 (285)
9 3out_A Glutamate racemase; str 100.0 0 0 510.5 26.6 249 13-270 7-256 (268)
10 2jfz_A Glutamate racemase; cel 100.0 0 0 486.2 25.9 245 15-269 2-255 (255)
11 1b73_A Glutamate racemase; iso 100.0 0 0 466.4 17.3 240 15-270 2-242 (254)
12 2zsk_A PH1733, 226AA long hypo 100.0 2.3E-38 9.8E-43 274.0 14.8 207 15-234 3-224 (226)
13 3ojc_A Putative aspartate/glut 100.0 2.9E-37 1.2E-41 266.7 9.5 208 14-233 3-228 (231)
14 1jfl_A Aspartate racemase; alp 100.0 4.2E-36 1.8E-40 259.0 12.2 206 15-233 3-224 (228)
15 2eq5_A 228AA long hypothetical 99.8 1.9E-20 8E-25 154.8 13.5 192 30-240 28-223 (228)
16 3ixl_A Amdase, arylmalonate de 99.0 3.6E-08 1.5E-12 73.2 15.8 207 13-237 6-226 (240)
17 2xed_A Putative maleate isomer 98.2 0.00023 9.8E-09 47.9 16.1 196 27-238 38-255 (273)
18 2dgd_A 223AA long hypothetical 96.8 0.03 1.3E-06 33.8 18.7 195 26-238 17-218 (223)
19 2gqw_A Ferredoxin reductase; f 94.5 0.056 2.3E-06 32.1 5.3 45 9-53 3-47 (408)
20 2eq5_A 228AA long hypothetical 94.2 0.12 5.1E-06 29.8 6.3 105 119-231 5-112 (228)
21 3ojc_A Putative aspartate/glut 94.0 0.34 1.4E-05 26.8 8.6 59 172-232 57-115 (231)
22 2zsk_A PH1733, 226AA long hypo 92.6 0.43 1.8E-05 26.2 7.1 100 121-232 2-112 (226)
23 1q1r_A Putidaredoxin reductase 88.6 0.47 2E-05 25.9 4.3 44 10-53 1-44 (431)
24 3h28_A Sulfide-quinone reducta 86.0 0.52 2.2E-05 25.6 3.3 49 12-60 1-58 (430)
25 3fg2_P Putative rubredoxin red 85.9 1 4.3E-05 23.6 4.8 41 13-53 1-41 (404)
26 2fds_A Orotidine-monophosphate 85.5 1.3 5.6E-05 22.9 5.2 35 189-225 254-288 (352)
27 3iwa_A FAD-dependent pyridine 85.1 0.77 3.2E-05 24.5 3.8 43 10-53 1-43 (472)
28 3ef6_A Toluene 1,2-dioxygenase 85.0 0.94 3.9E-05 23.9 4.2 42 12-53 1-42 (410)
29 1m6i_A Programmed cell death p 83.7 1.1 4.5E-05 23.5 4.0 49 5-53 2-51 (493)
30 2v7y_A Chaperone protein DNAK; 81.0 1.6 6.5E-05 22.5 4.0 53 179-231 288-345 (509)
31 3oc4_A Oxidoreductase, pyridin 79.7 2 8.6E-05 21.7 4.3 42 12-53 1-42 (452)
32 1yuw_A Heat shock cognate 71 k 79.4 2.1 9E-05 21.5 4.3 47 187-233 326-376 (554)
33 1yqz_A Coenzyme A disulfide re 78.6 3.3 0.00014 20.2 5.3 38 16-53 4-41 (438)
34 3lxd_A FAD-dependent pyridine 76.5 3.6 0.00015 20.1 4.7 39 15-53 11-49 (415)
35 1i5e_A Uracil phosphoribosyltr 76.3 2.8 0.00012 20.7 4.2 99 106-222 83-182 (209)
36 3d2f_A Heat shock protein homo 75.7 3.9 0.00016 19.8 4.8 46 188-233 331-379 (675)
37 2q5c_A NTRC family transcripti 74.7 4.3 0.00018 19.5 13.4 168 10-230 1-176 (196)
38 2kho_A Heat shock protein 70; 74.0 2.3 9.5E-05 21.4 3.2 56 178-233 318-378 (605)
39 2cdu_A NADPH oxidase; flavoenz 73.5 4 0.00017 19.7 4.4 38 16-53 3-40 (452)
40 1xtt_A Probable uracil phospho 72.6 4 0.00017 19.7 4.2 16 205-221 175-190 (216)
41 3kd9_A Coenzyme A disulfide re 72.4 4.2 0.00018 19.6 4.3 42 10-52 1-42 (449)
42 3kpk_A Sulfide-quinone reducta 70.9 4.2 0.00018 19.6 4.0 47 15-61 3-59 (434)
43 1dkg_D Molecular chaperone DNA 69.9 5.5 0.00023 18.8 5.1 42 190-231 332-376 (383)
44 1jce_A ROD shape-determining p 69.6 1.5 6.1E-05 22.6 1.4 47 194-240 280-329 (344)
45 1nhp_A NADH peroxidase; oxidor 68.9 5.7 0.00024 18.7 4.3 38 16-53 3-40 (447)
46 2pju_A Propionate catabolism o 68.6 5.8 0.00024 18.6 13.5 133 64-233 51-191 (225)
47 2v3a_A Rubredoxin reductase; a 67.8 4.3 0.00018 19.5 3.5 40 13-52 4-43 (384)
48 1jbk_A CLPB protein; beta barr 64.7 5.9 0.00025 18.6 3.7 80 9-90 40-127 (195)
49 3ic5_A Putative saccharopine d 64.2 6.3 0.00027 18.4 3.8 33 190-223 68-100 (118)
50 1o5o_A Uracil phosphoribosyltr 63.4 7.3 0.00031 18.0 5.4 98 107-222 96-194 (221)
51 3ics_A Coenzyme A-disulfide re 63.1 7.4 0.00031 17.9 4.3 41 13-53 36-76 (588)
52 2h78_A Hibadh, 3-hydroxyisobut 61.2 8 0.00034 17.7 6.7 21 15-35 5-25 (302)
53 1chm_A Creatine amidinohydrola 60.9 8.1 0.00034 17.7 4.7 36 46-82 4-44 (401)
54 2p65_A Hypothetical protein PF 59.3 5.6 0.00024 18.7 2.8 60 11-71 42-110 (187)
55 3o9z_A Lipopolysaccaride biosy 58.8 8.7 0.00037 17.5 5.7 67 15-88 5-84 (312)
56 2kkn_A Uncharacterized protein 58.8 1.4 6.1E-05 22.7 -0.3 34 186-225 123-156 (178)
57 1fcd_A Flavocytochrome C sulfi 58.3 8 0.00034 17.7 3.5 35 14-48 3-37 (401)
58 3h1q_A Ethanolamine utilizatio 53.7 10 0.00044 16.9 3.4 39 191-229 226-267 (272)
59 1m7g_A Adenylylsulfate kinase; 53.5 11 0.00045 16.9 4.2 86 11-98 21-119 (211)
60 3ec7_A Putative dehydrogenase; 52.6 11 0.00046 16.8 5.6 73 10-89 20-100 (357)
61 1kjq_A GART 2, phosphoribosylg 49.1 12 0.00052 16.4 8.4 84 14-109 12-105 (391)
62 3kcq_A Phosphoribosylglycinami 48.4 2.6 0.00011 21.0 -0.3 29 7-37 2-30 (215)
63 2axq_A Saccharopine dehydrogen 47.6 13 0.00055 16.3 3.2 36 10-47 20-55 (467)
64 1nvm_B Acetaldehyde dehydrogen 45.6 14 0.00059 16.1 7.1 119 15-137 6-141 (312)
65 1z2w_A Vacuolar protein sortin 44.5 2.2 9.2E-05 21.4 -1.2 33 188-226 114-146 (192)
66 3kg2_A Glutamate receptor 2; I 44.3 15 0.00062 16.0 9.7 63 64-129 50-130 (823)
67 1cjc_A Protein (adrenodoxin re 44.1 15 0.00062 15.9 4.7 41 12-53 5-45 (460)
68 3i33_A Heat shock-related 70 k 43.1 15 0.00064 15.8 4.7 43 189-231 349-395 (404)
69 2qr3_A Two-component system re 42.6 16 0.00065 15.8 3.4 38 65-105 16-53 (140)
70 2a22_A Vacuolar protein sortin 42.1 3 0.00013 20.5 -0.8 32 189-226 139-170 (215)
71 3cgb_A Pyridine nucleotide-dis 41.6 16 0.00068 15.7 4.2 39 15-53 38-76 (480)
72 3h8l_A NADH oxidase; membrane 40.9 9.8 0.00041 17.1 1.7 48 12-60 1-58 (409)
73 1m3u_A 3-methyl-2-oxobutanoate 38.0 18 0.00077 15.3 5.2 67 29-106 69-135 (264)
74 3doj_A AT3G25530, dehydrogenas 37.0 19 0.00079 15.2 8.8 29 7-36 16-44 (310)
75 3nkl_A UDP-D-quinovosamine 4-d 35.6 7.1 0.0003 18.1 0.2 83 11-95 2-84 (141)
76 3cu5_A Two component transcrip 35.1 20 0.00085 15.0 6.7 13 90-102 40-52 (141)
77 2kin_B Kinesin; motor protein, 32.6 22 0.00091 14.8 2.3 55 25-93 7-61 (100)
78 3fvw_A Putative NAD(P)H-depend 32.6 22 0.00093 14.8 4.2 108 12-132 1-122 (192)
79 3ot5_A UDP-N-acetylglucosamine 32.5 22 0.00094 14.8 6.0 100 53-160 91-204 (403)
80 1ute_A Protein (II purple acid 32.0 23 0.00095 14.7 4.8 46 37-83 5-50 (313)
81 3m2t_A Probable dehydrogenase; 31.7 23 0.00096 14.7 5.3 106 15-130 7-128 (359)
82 3lov_A Protoporphyrinogen oxid 31.1 23 0.00099 14.6 3.6 31 13-43 4-34 (475)
83 3jpw_A Glutamate [NMDA] recept 31.0 24 0.00099 14.6 10.2 44 62-107 49-95 (363)
84 3mvk_A Protein FUCU, protein R 31.0 23 0.00095 14.7 2.2 36 5-40 32-67 (148)
85 2ivd_A PPO, PPOX, protoporphyr 30.6 22 0.00092 14.8 2.1 23 15-37 18-40 (478)
86 3hsy_A Glutamate receptor 2; l 30.5 24 0.001 14.5 11.3 103 17-129 7-130 (376)
87 2yw2_A Phosphoribosylamine--gl 30.2 24 0.001 14.5 6.7 77 16-107 3-92 (424)
88 3b2n_A Uncharacterized protein 29.5 25 0.001 14.4 3.0 39 65-105 16-55 (133)
89 1sky_E F1-ATPase, F1-ATP synth 29.5 25 0.001 14.4 8.1 66 14-90 152-221 (473)
90 2ffc_A Orotidine 5-monophospha 29.2 19 0.00079 15.3 1.5 35 189-225 264-298 (353)
91 3ck2_A Conserved uncharacteriz 28.5 5.3 0.00022 18.9 -1.4 32 189-226 103-134 (176)
92 2x7x_A Sensor protein; transfe 28.3 26 0.0011 14.3 4.3 77 13-105 6-91 (325)
93 3oj0_A Glutr, glutamyl-tRNA re 28.3 22 0.00092 14.8 1.7 90 118-223 19-110 (144)
94 1t0k_B YL32, RP73, 60S ribosom 27.4 27 0.0011 14.2 5.4 57 69-127 31-91 (105)
95 3moi_A Probable dehydrogenase; 27.2 27 0.0011 14.2 6.7 119 12-139 1-132 (387)
96 2i0o_A Ser/Thr phosphatase; be 27.1 18 0.00074 15.4 1.1 21 16-37 54-74 (304)
97 3i23_A Oxidoreductase, GFO/IDH 27.0 3.8 0.00016 19.9 -2.3 110 12-128 1-123 (349)
98 3mz0_A Inositol 2-dehydrogenas 26.9 28 0.0012 14.1 8.5 67 14-88 3-78 (344)
99 3gaa_A Uncharacterized protein 26.3 28 0.0012 14.1 6.3 71 9-82 21-124 (252)
100 2qrv_A DNA (cytosine-5)-methyl 26.2 19 0.00081 15.2 1.2 12 16-28 20-31 (295)
101 3db2_A Putative NADPH-dependen 26.0 29 0.0012 14.0 6.3 119 12-140 2-135 (354)
102 1bd3_D Uprtase, uracil phospho 25.7 29 0.0012 14.0 2.9 22 196-221 194-215 (243)
103 3l49_A ABC sugar (ribose) tran 25.6 29 0.0012 14.0 4.6 204 14-235 6-260 (291)
104 3kb3_B Protein phosphatase 2C 25.5 16 0.00066 15.8 0.6 21 16-37 54-74 (321)
105 3kdj_B Protein phosphatase 2C 25.4 16 0.00066 15.7 0.6 23 14-37 53-75 (316)
106 3ihm_A Styrene monooxygenase A 25.1 25 0.0011 14.4 1.6 39 6-46 15-53 (430)
107 1id0_A PHOQ histidine kinase; 24.7 30 0.0013 13.9 1.9 23 58-80 7-29 (152)
108 2zkr_6 60S ribosomal protein L 24.7 30 0.0013 13.9 4.6 38 69-107 35-74 (115)
109 1yb4_A Tartronic semialdehyde 24.4 31 0.0013 13.8 8.3 30 15-47 5-34 (295)
110 2zyd_A 6-phosphogluconate dehy 24.3 31 0.0013 13.8 6.0 24 13-36 15-38 (480)
111 3b55_A Succinoglycan biosynthe 24.3 31 0.0013 13.8 5.1 63 26-94 62-124 (451)
112 2bc0_A NADH oxidase; flavoprot 24.3 31 0.0013 13.8 3.7 42 12-53 34-76 (490)
113 1kp0_A Creatine amidinohydrola 24.3 31 0.0013 13.8 4.3 37 46-83 5-46 (402)
114 2vli_A Antibiotic resistance p 24.0 31 0.0013 13.8 5.1 36 10-46 1-38 (183)
115 2qgm_A Succinoglycan biosynthe 23.8 31 0.0013 13.8 5.7 66 25-96 60-126 (445)
116 3l6u_A ABC-type sugar transpor 23.5 32 0.0013 13.7 3.0 81 12-106 7-94 (293)
117 2rjn_A Response regulator rece 23.4 32 0.0013 13.7 3.2 33 67-102 22-54 (154)
118 1q7z_A 5-methyltetrahydrofolat 23.4 32 0.0013 13.7 5.6 14 12-25 11-24 (566)
119 3h6g_A Glutamate receptor, ion 23.2 32 0.0014 13.7 5.1 148 35-213 39-212 (395)
120 3gt0_A Pyrroline-5-carboxylate 22.9 33 0.0014 13.7 5.5 24 12-35 1-24 (247)
121 2p8e_A PPM1B beta isoform vari 22.8 19 0.00079 15.3 0.6 22 15-37 57-78 (307)
122 3fhl_A Putative oxidoreductase 22.5 12 0.0005 16.6 -0.5 110 15-130 7-125 (362)
123 1v4v_A UDP-N-acetylglucosamine 22.2 34 0.0014 13.6 6.7 102 51-160 66-181 (376)
124 2fn9_A Ribose ABC transporter, 22.2 34 0.0014 13.6 3.5 207 12-235 1-259 (290)
125 1q7r_A Predicted amidotransfer 22.1 34 0.0014 13.5 5.9 64 3-96 15-79 (219)
126 3e18_A Oxidoreductase; dehydro 21.9 34 0.0014 13.5 7.5 69 11-88 2-77 (359)
127 3c7t_A Ecdysteroid-phosphate p 21.9 34 0.0014 13.5 5.6 21 195-215 186-206 (263)
128 3me5_A Cytosine-specific methy 21.6 26 0.0011 14.3 1.1 13 15-28 91-103 (482)
129 1qkk_A DCTD, C4-dicarboxylate 21.6 35 0.0015 13.5 3.5 34 66-102 17-50 (155)
130 1o66_A 3-methyl-2-oxobutanoate 21.5 35 0.0015 13.5 7.4 69 29-109 69-142 (275)
131 1w41_A 50S ribosomal protein L 21.3 35 0.0015 13.4 5.8 57 70-127 26-85 (101)
132 2him_A L-asparaginase 1; hydro 21.1 27 0.0011 14.2 1.1 73 29-105 51-133 (358)
133 2iq1_A Protein phosphatase 2C 21.1 24 0.001 14.5 0.9 21 16-37 38-58 (274)
134 3crn_A Response regulator rece 20.8 36 0.0015 13.4 3.2 38 65-105 16-53 (132)
135 3c1a_A Putative oxidoreductase 20.5 36 0.0015 13.3 3.3 68 15-88 12-81 (315)
136 2z3y_A Lysine-specific histone 20.5 36 0.0015 13.3 2.4 28 10-37 104-131 (662)
137 2bi7_A UDP-galactopyranose mut 20.3 37 0.0016 13.3 1.9 22 14-35 4-25 (384)
138 2b4a_A BH3024; 10175646, struc 20.2 37 0.0016 13.3 1.8 64 24-105 2-66 (138)
139 1a6q_A Phosphatase 2C; catalyt 20.2 23 0.00096 14.7 0.6 23 15-38 55-77 (382)
No 1
>1zuw_A Glutamate racemase 1; (R)-glutamate, peptidoglycan biosynthesis, isomerase; HET: DGL; 1.75A {Bacillus subtilis}
Probab=100.00 E-value=0 Score=535.63 Aligned_cols=254 Identities=22% Similarity=0.374 Sum_probs=238.2
Q ss_pred CCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHH
Q ss_conf 48870798779105899999999689998999941578989898989999999999999862169848997176202633
Q gi|254780905|r 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLI 91 (271)
Q Consensus 12 ~~~~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACNTasa~~ 91 (271)
|++||||||||+|||||+++|++++|+++|+||||++|+|||+||+++|++++.+++++|+++++|++|||||||||+.+
T Consensus 2 ~~~pIgvfDSGvGGltvl~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~i~~~~~~~~~~l~~~~~~~~IVIACNTas~~a 81 (272)
T 1zuw_A 2 LEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYLLENHHIKMLVIACNTATAIA 81 (272)
T ss_dssp TTSCEEEEESSSTTHHHHHHHHHHSTTCCEEEEECGGGCCCSSSCHHHHHHHHHHHHHHHHHHSCCSEEEECCHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHH
T ss_conf 99978999889767999999998789998899966888998999999999999999999997179989997663488999
Q ss_pred HHHHHHHCCCCCCCCCC-HHHHHHHHHCCCCCEEEEECHHHHCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCC
Q ss_conf 89998625777654454-79999998407883299850677317016899851278857977056422578776642677
Q gi|254780905|r 92 KDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170 (271)
Q Consensus 92 ~~~l~~~~~~ipiigii-~~~~~a~~~~~~~~VgiLAT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~lv~~iE~~~~~~~ 170 (271)
++.+|+.+ ++|++||+ |+++.|...+++++||||||++|++|++|++++++++++..|..++|+.||++||++..
T Consensus 82 l~~l~~~~-~~piigvi~p~~~~a~~~s~~~~IgVlaT~~Tv~s~~y~~~i~~~~~~~~v~~~~~~~Lv~lIE~g~~--- 157 (272)
T 1zuw_A 82 LDDIQRSV-GIPVVGVIQPGARAAIKVTDNQHIGVIGTENTIKSNAYEEALLALNPDLKVENLACPLLVPFVESGKF--- 157 (272)
T ss_dssp HHHHHHHC-SSCEEESHHHHHHHHHHHCSSSEEEEEECHHHHHTTHHHHHHHHHCTTCEEEEEECTTHHHHHTSCCC---
T ss_pred HHHHHHHC-CCCEEECCHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCC---
T ss_conf 99999863-98666224387777765056757999820877744899999873278736995278329999982755---
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHCCCCC-CCCCCCEE
Q ss_conf 69799999999984654105887899805635889999998648997898285899999999986427334-57788779
Q gi|254780905|r 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHA 249 (271)
Q Consensus 171 ~~~~~~~~~l~~~l~~~~~~~~D~iILGCTHyPll~~~i~~~~~~~v~iIDpa~~va~~~~~~L~~~~~~~-~~~~~~~~ 249 (271)
..+.....++.++.++.++++|++|||||||||+++.|++++|+++++|||++++|++++++|.++++.+ +...++++
T Consensus 158 -~~~~~~~~l~~~l~~l~~~~~D~lVLGCTHyPll~~~i~~~l~~~v~iIDpa~~vA~~v~~~L~~~~l~~~~~~~~~~~ 236 (272)
T 1zuw_A 158 -LDQTADEIVKTSLYPLKDTSIDSLILGCTHYPILKEAIQRYMGEHVNIISSGDETAREVSTILSYKGLLNQSPIAPDHQ 236 (272)
T ss_dssp -CHHHHHHHHHHHHHHHHHSCCSEEEEESTTGGGGHHHHHHHHCTTSEEEEHHHHHHHHHHHHHHHHTCCCCCCSCCCEE
T ss_pred -CCHHHHHHHHHHHCHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCEE
T ss_conf -7488999999995655416788899879883678999999809998998878999999999997667655678998759
Q ss_pred EEECCCHHHHHHHHHHHCCCC
Q ss_conf 996699799999999856888
Q gi|254780905|r 250 LFLSGKPDIAMRRLMQGFGLK 270 (271)
Q Consensus 250 f~~T~~~~~~~~~~~~~~G~~ 270 (271)
||+||+++.|.+.+.+|||.+
T Consensus 237 f~~T~~~~~f~~~~~~flg~~ 257 (272)
T 1zuw_A 237 FLTTGARDQFAKIADDWFGHE 257 (272)
T ss_dssp EEESSCHHHHHHHHHHHC---
T ss_pred EEECCCHHHHHHHHHHHCCCC
T ss_conf 998999999999999974999
No 2
>2dwu_A Glutamate racemase; isomerase; HET: DGL; 1.60A {Bacillus anthracis}
Probab=100.00 E-value=0 Score=532.12 Aligned_cols=255 Identities=20% Similarity=0.335 Sum_probs=240.3
Q ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCH
Q ss_conf 63488707987791058999999996899989999415789898989899999999999998621698489971762026
Q gi|254780905|r 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFT 89 (271)
Q Consensus 10 ~~~~~~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACNTasa 89 (271)
.+.+.||||||||+|||||++++++++|+++|+||||++|+|||+||++||++++.++++||. +.++++|||||||||+
T Consensus 4 ~~~~~pIgvfDSGiGGLtvl~~l~~~lP~~~~iY~~D~a~~PYG~ks~eei~~~~~~~~~~L~-~~~~~~IVIACNTaS~ 82 (276)
T 2dwu_A 4 CHKHSVIGVLDSGVGGLTVASEIIRQLPKESICYIGDNERCPYGPRSVEEVQSFVFEMVEFLK-QFPLKALVVACNTAAA 82 (276)
T ss_dssp -CCCCEEEEEESSSTTHHHHHHHHHHCTTSCEEEEECGGGCCCTTSCHHHHHHHHHHHHHHHT-TSCEEEEEECCHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH-HCCCCEEEEECCHHHH
T ss_conf 568994899968976799999999978999989996389999899999999999999999998-5799999992671899
Q ss_pred HHHHHHHHHCCCCCCCCCC-HHHHHHHHHCCCCCEEEEECHHHHCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHC
Q ss_conf 3389998625777654454-799999984078832998506773170168998512788579770564225787766426
Q gi|254780905|r 90 LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG 168 (271)
Q Consensus 90 ~~~~~l~~~~~~ipiigii-~~~~~a~~~~~~~~VgiLAT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~lv~~iE~~~~~ 168 (271)
.+++.+|+++ ++|++||+ |+++++...+++++||||||++|++|++|++++++++++++|..++|+.||++||++..
T Consensus 83 ~al~~lr~~~-~~piigvi~p~~~~a~~~~~~~~IgvLAT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~lv~liE~g~~- 160 (276)
T 2dwu_A 83 ATLAALQEAL-SIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIQSNMYEKALHELDTYLKVHSHACPTLATVVENRLE- 160 (276)
T ss_dssp HHHHHHHHHC-SSCEEESHHHHHHHHHHHCSSSEEEEEECHHHHHTTHHHHHHHHHCTTCEEEEEECTTHHHHHHHSTT-
T ss_pred HHHHHHHHCC-CCCEEECCHHHHHHHHHHCCCCEEEEEEEHHHHHCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCC-
T ss_conf 9999997337-98777346289999998246663899952367768578999987388987996157527999985245-
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCE
Q ss_conf 77697999999999846541058878998056358899999986489978982858999999999864273345778877
Q gi|254780905|r 169 IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248 (271)
Q Consensus 169 ~~~~~~~~~~~l~~~l~~~~~~~~D~iILGCTHyPll~~~i~~~~~~~v~iIDpa~~va~~~~~~L~~~~~~~~~~~~~~ 248 (271)
+.+.++..++.++.++..+++|++|||||||||+++.|++.+|+++++|||++++|++++++|.++++.+....+++
T Consensus 161 ---~~~~~~~~i~~~l~~l~~~~~d~lVLGCTHyPll~~~i~~~l~~~v~iIDpa~~vA~~~~~~L~~~~l~~~~~~~~~ 237 (276)
T 2dwu_A 161 ---DTAYVTQQVKQALLPLTKEDIDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKH 237 (276)
T ss_dssp ---CHHHHHHHHHHHHHHHHTSCCSEEEECSTTGGGGHHHHHHHHCTTSEEEEHHHHHHHHHHHHHHHTTCCCCCSSCCC
T ss_pred ---CCHHHHHHHHHHHCCHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCE
T ss_conf ---83899999999857111269987998576616479999997599999988889999999999986686557999876
Q ss_pred EEEECCCHHHHHHHHHHHCCCC
Q ss_conf 9996699799999999856888
Q gi|254780905|r 249 ALFLSGKPDIAMRRLMQGFGLK 270 (271)
Q Consensus 249 ~f~~T~~~~~~~~~~~~~~G~~ 270 (271)
+||+||+++.|.+.+.+|||.+
T Consensus 238 ~f~~T~~~~~f~~~a~~~lg~~ 259 (276)
T 2dwu_A 238 RFFTTGSVSSFEHIAERWLGYQ 259 (276)
T ss_dssp EEEESSCHHHHHHHHHHHHSSC
T ss_pred EEEECCCHHHHHHHHHHHCCCC
T ss_conf 9998999899999999977999
No 3
>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis}
Probab=100.00 E-value=0 Score=530.70 Aligned_cols=254 Identities=22% Similarity=0.366 Sum_probs=237.4
Q ss_pred CCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHH
Q ss_conf 34887079877910589999999968999899994157898989898999999999999986216984899717620263
Q gi|254780905|r 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTL 90 (271)
Q Consensus 11 ~~~~~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACNTasa~ 90 (271)
+|++||||||||+|||||++++++++|+++|+|+||++|+|||+||+++|++++.++++||.+ .+|++|||||||||+.
T Consensus 1 ~m~~pIgvfDSGiGGLtv~~~l~~~~P~~~~iY~~D~a~~PYG~ks~~~i~~~~~~~~~~l~~-~~~~~IViACNTas~~ 79 (267)
T 2gzm_A 1 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWEMTEHLLD-LNIKMLVIACNTATAV 79 (267)
T ss_dssp CTTSCEEEEESSSTTHHHHHHHHHHCTTSCEEEEECTTTCCCTTSCHHHHHHHHHHHHHHHHT-TTCSEEEECCHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH-CCCCEEEEECCCHHHH
T ss_conf 999978999789567999999999789999899955888998999999999999999999986-6998999907737899
Q ss_pred HHHHHHHHCCCCCCCCCC-HHHHHHHHHCCCCCEEEEECHHHHCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCC
Q ss_conf 389998625777654454-7999999840788329985067731701689985127885797705642257877664267
Q gi|254780905|r 91 IKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169 (271)
Q Consensus 91 ~~~~l~~~~~~ipiigii-~~~~~a~~~~~~~~VgiLAT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~lv~~iE~~~~~~ 169 (271)
+++.||+++ .+|++|++ |+++.|...+++++||||||++|++|++|+++++++++++.+..++|+.||++||++..+
T Consensus 80 a~~~l~~~~-~~pii~~i~~~~~~a~~~~~~~~IgvlAT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~Lv~lIE~g~~~- 157 (267)
T 2gzm_A 80 VLEEMQKQL-PIPVVGVIHPGSRTALKVTNTYHVGIIGTIGTVKSGAYEEALKSINNRVMVESLACPPFVELVESGNFE- 157 (267)
T ss_dssp HHHHHHHHC-SSCEEESHHHHHHHHHHHCSSCEEEEEECHHHHHHTHHHHHHHHHCTTCEEEEEECTTHHHHHHTTCSS-
T ss_pred HHHHHHHHC-CCCEEECCCHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCC-
T ss_conf 999999738-987741463778888744788679999505466538999999864898748861562799999815657-
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHCCCCCC-CCCCCE
Q ss_conf 7697999999999846541058878998056358899999986489978982858999999999864273345-778877
Q gi|254780905|r 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDH 248 (271)
Q Consensus 170 ~~~~~~~~~~l~~~l~~~~~~~~D~iILGCTHyPll~~~i~~~~~~~v~iIDpa~~va~~~~~~L~~~~~~~~-~~~~~~ 248 (271)
.+..+..++.++.++...++|++|||||||||+++.|++++|+++++|||++++|++++++|.++++.+. ...+++
T Consensus 158 ---~~~~~~~l~~~l~~l~~~~~d~lILGCTHyPll~~~i~~~~~~~v~iIDpa~~va~~v~~~L~~~~l~~~~~~~~~~ 234 (267)
T 2gzm_A 158 ---SEMAYEVVRETLQPLKNTDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 234 (267)
T ss_dssp ---SHHHHHHHHHHHHHHHHSCCSEEEECSTTGGGGHHHHHHHHCTTSEEEEHHHHHHHHHHHHHHHTTCCCCSSCCCCC
T ss_pred ---CHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCE
T ss_conf ---76799999999989873899889974767687899999980999899847899999999999865866667899887
Q ss_pred EEEECCCHHHHHHHHHHHCCCC
Q ss_conf 9996699799999999856888
Q gi|254780905|r 249 ALFLSGKPDIAMRRLMQGFGLK 270 (271)
Q Consensus 249 ~f~~T~~~~~~~~~~~~~~G~~ 270 (271)
+||+||+++.|.+.+.+|||.+
T Consensus 235 ~f~~T~~~~~f~~~~~~~l~~~ 256 (267)
T 2gzm_A 235 LFLTTGKIGLFKEIASKWFGQP 256 (267)
T ss_dssp EEEESSCHHHHHHHHHHHTCCC
T ss_pred EEEECCCHHHHHHHHHHHCCCC
T ss_conf 9998999899999999975999
No 4
>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus}
Probab=100.00 E-value=0 Score=530.71 Aligned_cols=260 Identities=22% Similarity=0.340 Sum_probs=240.2
Q ss_pred CCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECC
Q ss_conf 33446348870798779105899999999689998999941578989898989999999999999862169848997176
Q gi|254780905|r 6 YPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACN 85 (271)
Q Consensus 6 ~~~~~~~~~~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACN 85 (271)
.|-..+|++||||||||+|||||+++|++++|+++|+||||++|+|||+||++||++++.+++++|. +.+|++||||||
T Consensus 15 ~~~~~~mn~PIgvfDSGvGGLtvl~~l~~~lP~~~~iY~~D~~~~PYG~ks~eei~~~~~~~~~~L~-~~g~~~iVIACN 93 (286)
T 2jfq_A 15 VPRGSHMNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKLM-EFDIKMLVIACN 93 (286)
T ss_dssp ------CCSCEEEEESSSTTHHHHHHHHHHCTTCCEEEEECTTTCCCTTSCHHHHHHHHHHHHHHHT-TSCCSEEEECCH
T ss_pred CCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH-HCCCCEEEECCC
T ss_conf 6686568998899978977799999999978999989994588898888999999999999999998-669999998167
Q ss_pred CCCHHHHHHHHHHCCCCCCCCCC-HHHHHHHHHCCCCCEEEEECHHHHCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHH
Q ss_conf 20263389998625777654454-79999998407883299850677317016899851278857977056422578776
Q gi|254780905|r 86 TAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE 164 (271)
Q Consensus 86 Tasa~~~~~l~~~~~~ipiigii-~~~~~a~~~~~~~~VgiLAT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~lv~~iE~ 164 (271)
|||+.+++.+|+++ ++|++||+ |+++.|+..+++++||||||++|++|++|+++++++++++.+..++|+.||++||+
T Consensus 94 TAs~~al~~l~~~~-~ipiigii~p~~k~a~~~~~~~~IgvlaT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~Lv~lIE~ 172 (286)
T 2jfq_A 94 TATAVALEYLQKTL-SISVIGVIEPGARTAIMTTRNQNVLVLGTEGTIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQ 172 (286)
T ss_dssp HHHHHHHHHHHHHC-SSEEEESHHHHHHHHHHHCSSSEEEEEECHHHHHHTHHHHHHHHHCTTCEEEEEECTTHHHHHHT
T ss_pred CHHHHHHHHHHHHC-CCCEEEECHHHHHHHHHHCCCCEEEEEECHHHHHCHHHHHHHHHCCCCCEEEEECCCHHHHHHHH
T ss_conf 58999999999866-99889613799999987147856999942145536599999974089865898245138899996
Q ss_pred HHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHCCCCC-CC
Q ss_conf 64267769799999999984654105887899805635889999998648997898285899999999986427334-57
Q gi|254780905|r 165 YACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TR 243 (271)
Q Consensus 165 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~D~iILGCTHyPll~~~i~~~~~~~v~iIDpa~~va~~~~~~L~~~~~~~-~~ 243 (271)
+... .....+..++.++.++.++++|++|||||||||+++.|++++|+++++|||++++|++++++|.++++.+ +.
T Consensus 173 g~~~---~~~~~~~~l~~~l~~l~~~~iD~lILGCTHyPll~~~i~~~l~~~v~iIDpa~~vA~~v~~~L~~~~~~~~~~ 249 (286)
T 2jfq_A 173 MRYS---DPTITSIVIHQTLKRWRNSESDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYT 249 (286)
T ss_dssp TCTT---CHHHHHHHHHHHHGGGTTCSCSEEEEESSSGGGGHHHHHHHTTTCSEEEEHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred HCCC---CHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 1138---8889999999988886467898799888784889999999829998898878999999999998677554568
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHCCCC
Q ss_conf 788779996699799999999856888
Q gi|254780905|r 244 VFDDHALFLSGKPDIAMRRLMQGFGLK 270 (271)
Q Consensus 244 ~~~~~~f~~T~~~~~~~~~~~~~~G~~ 270 (271)
..++.+||+||+++.|.+.+.+|||.+
T Consensus 250 ~~~~~~f~tT~~~~~f~~~~~~~lg~~ 276 (286)
T 2jfq_A 250 EHPDHRFFATGDTTHITNIIKEWLNLS 276 (286)
T ss_dssp SSCCCEEEESSCCHHHHHHHHHHHCCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHCCCC
T ss_conf 998879998999899999999974999
No 5
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=100.00 E-value=0 Score=529.62 Aligned_cols=255 Identities=21% Similarity=0.334 Sum_probs=238.0
Q ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCH
Q ss_conf 63488707987791058999999996899989999415789898989899999999999998621698489971762026
Q gi|254780905|r 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFT 89 (271)
Q Consensus 10 ~~~~~~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACNTasa 89 (271)
..|++||||||||+|||||+++|++++|+++|+|+||++|+|||+||+++|++++.+++++|.+ .+|++|||||||||+
T Consensus 2 ~~m~~pIgvfDSGvGGLsvl~~l~~~lP~~~~iY~~D~~~~PYG~ks~~ei~~~~~~~~~~l~~-~~~~~iViACNTas~ 80 (269)
T 3ist_A 2 NAMKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEMTNFLVD-RGIKMLVIACNTATA 80 (269)
T ss_dssp CSSCCCEEEEESSSTTHHHHHHHHHHCTTCCEEEEECGGGCCCTTSCHHHHHHHHHHHHHHHHH-TTCSEEEECCHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH-CCCCEEEEECCCHHH
T ss_conf 9777968999589757999999999789999899944889998999999999999999999986-699989994685579
Q ss_pred HHHHHHHHHCCCCCCCCCC-HHHHHHHHHCCCCCEEEEECHHHHCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHC
Q ss_conf 3389998625777654454-799999984078832998506773170168998512788579770564225787766426
Q gi|254780905|r 90 LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG 168 (271)
Q Consensus 90 ~~~~~l~~~~~~ipiigii-~~~~~a~~~~~~~~VgiLAT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~lv~~iE~~~~~ 168 (271)
.+++.+|+++ .+|++||+ |+++.+...+++++||||||++|++|++|++++++++++++|..++|+.||++||++..+
T Consensus 81 ~al~~lr~~~-~ipiigvi~p~~k~a~~~~~~~~IgvlAT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~Lv~~IE~g~~~ 159 (269)
T 3ist_A 81 AALYDIREKL-DIPVIGVIQPGSRAALKATRNNKIGVLGTLGTVESMAYPTALKGLNRRVEVDSLACPKFVSVVESGEYK 159 (269)
T ss_dssp HHHHHHHHHC-SSCEEESHHHHHHHHHHHCSSSEEEEEECHHHHHHTHHHHHHHHHCTTCEEEEEECHHHHHHHHTTCTT
T ss_pred HHHHHHHHHC-CCCEECCCCHHHHHHHHCCCCCEEEEEECHHHHHCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCC
T ss_conf 9999999757-997642662647889865688569999635453156779999841898249984567799999806668
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHCCCCCC-CCCCC
Q ss_conf 77697999999999846541058878998056358899999986489978982858999999999864273345-77887
Q gi|254780905|r 169 IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDD 247 (271)
Q Consensus 169 ~~~~~~~~~~~l~~~l~~~~~~~~D~iILGCTHyPll~~~i~~~~~~~v~iIDpa~~va~~~~~~L~~~~~~~~-~~~~~ 247 (271)
.+..+..++.++.++..+++|++|||||||||+++.|++++|+++++|||++++|++++++|.++++.+. ...++
T Consensus 160 ----~~~~~~~~~~~l~~~~~~~iD~lILGCTHyPll~~~i~~~l~~~v~iIDpa~~vA~~v~~~L~~~~ll~~~~~~~~ 235 (269)
T 3ist_A 160 ----SAIAKKVVAESLLPLKSTKIDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDATDEEIE 235 (269)
T ss_dssp ----SHHHHHHHHHHHGGGGGSCCCEEEECSTTGGGGHHHHHHHHCTTSEEECTHHHHHHHHHHHHHHTTCCCCCCCCCC
T ss_pred ----CHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf ----7889999999987650568887997476707777899987599989987789999999999986776555689977
Q ss_pred EEEEECCCHHHHHHHHHHHCCCC
Q ss_conf 79996699799999999856888
Q gi|254780905|r 248 HALFLSGKPDIAMRRLMQGFGLK 270 (271)
Q Consensus 248 ~~f~~T~~~~~~~~~~~~~~G~~ 270 (271)
.+||+||+++.|.+.+.+|||..
T Consensus 236 ~~f~~T~~~~~f~~~~~~~l~~~ 258 (269)
T 3ist_A 236 HRFFTTGSTQIFKDIAKDWLNMP 258 (269)
T ss_dssp CEEEESSCHHHHHHHHHHHHCCT
T ss_pred EEEEECCCHHHHHHHHHHHCCCC
T ss_conf 69998999899999999973999
No 6
>2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL biogenesis/degradation, cell shape, benzyl purine, MURI inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis} PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A*
Probab=100.00 E-value=0 Score=526.14 Aligned_cols=258 Identities=22% Similarity=0.344 Sum_probs=238.2
Q ss_pred CCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC
Q ss_conf 44634887079877910589999999968999899994157898989898999999999999986216984899717620
Q gi|254780905|r 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA 87 (271)
Q Consensus 8 ~~~~~~~~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACNTa 87 (271)
..|..++||||||||+|||||+++|++++|+++|+||||++|+|||+||++||++++.+++++|.+ +++++||||||||
T Consensus 19 ~~m~~~~pIgvfDSGiGGLsv~~~l~~~lP~~~~iY~~D~a~~PYG~ks~eei~~~~~~~~~~L~~-~~~~~IVIACNTa 97 (290)
T 2vvt_A 19 SHMSNQEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWEMADFLLK-KRIKMLVIACNTA 97 (290)
T ss_dssp SCCGGGSCEEEEESSSTTHHHHHHHHHHCTTSCEEEEECTTTCCCTTSCHHHHHHHHHHHHHHHHT-TTCSEEEECCHHH
T ss_pred CCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH-CCCCEEEEECCHH
T ss_conf 434789978999689777999999999789999899934789988989999999999999999997-3999699944528
Q ss_pred CHHHHHHHHHHCCCCCCCCCC-HHHHHHHHHCCCCCEEEEECHHHHCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHH
Q ss_conf 263389998625777654454-7999999840788329985067731701689985127885797705642257877664
Q gi|254780905|r 88 FTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYA 166 (271)
Q Consensus 88 sa~~~~~l~~~~~~ipiigii-~~~~~a~~~~~~~~VgiLAT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~lv~~iE~~~ 166 (271)
|+.+++.+|+++ .+|++||+ |+++.++..+++++||||||++|++|++|++.+++++++++|..++|+.||++||++.
T Consensus 98 sa~al~~lr~~~-~vpiigvi~p~ik~a~~~~~~~~IgVLAT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~Lv~lIE~g~ 176 (290)
T 2vvt_A 98 TAVALEEIKAAL-PIPVVGVILPGARAAVKVTKNNKIGVIGTLGTIKSASYEIAIKSKAPAIEVTSLACPKFVPIVESNQ 176 (290)
T ss_dssp HHHHHHHHHHHC-SSCEEESSHHHHHHHHHHCSSSEEEEEECHHHHHTTHHHHHHHTTCTTSEEEEEECTTHHHHHHTTC
T ss_pred HHHHHHHHHHCC-CCCEEECCHHHHHHHHHCCCCCEEEEEEEHHHHHCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHCC
T ss_conf 899999997508-9987821708789999717898699996278875623678887448996897404861789998166
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHCCCCCCC--C
Q ss_conf 26776979999999998465410588789980563588999999864899789828589999999998642733457--7
Q gi|254780905|r 167 CGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--V 244 (271)
Q Consensus 167 ~~~~~~~~~~~~~l~~~l~~~~~~~~D~iILGCTHyPll~~~i~~~~~~~v~iIDpa~~va~~~~~~L~~~~~~~~~--~ 244 (271)
.+ .+..+..++.++.++...++|++|||||||||+++.|++++|+++++|||++++|++++++|.+.++.+.. .
T Consensus 177 ~~----~~~~~~~i~~~l~~l~~~~iD~lILGCTHyPll~~~i~~~l~~~v~iIDpa~~va~~v~~~L~~~~l~~~~~~~ 252 (290)
T 2vvt_A 177 YR----SSVAKKIVAETLQALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDIAHTPEAP 252 (290)
T ss_dssp TT----SHHHHHHHHHHHGGGTTSCCSEEEECSTTGGGGHHHHHHHHCTTCEEEEHHHHHHHHHHHHHHHTTCCCCC---
T ss_pred CC----CHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 68----89999999999988860699889984887387776289764999889887899999999999863655676689
Q ss_pred CCCEEEEECCCHHHHHHHHHHHCCCCC
Q ss_conf 887799966997999999998568889
Q gi|254780905|r 245 FDDHALFLSGKPDIAMRRLMQGFGLKS 271 (271)
Q Consensus 245 ~~~~~f~~T~~~~~~~~~~~~~~G~~~ 271 (271)
.+..+||+||+++.|.+.+.+|||+++
T Consensus 253 ~~~~~f~tT~~~~~f~~~~~~~lg~~~ 279 (290)
T 2vvt_A 253 TQPHEFYTTGSAKMFEEIASSWLGIEN 279 (290)
T ss_dssp --CCEEEESSCHHHHHHHHHHHHTCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHCCCCC
T ss_conf 975399989998999999999749998
No 7
>2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1 gas} PDB: 2ohg_A 2ohv_A*
Probab=100.00 E-value=0 Score=524.41 Aligned_cols=251 Identities=24% Similarity=0.374 Sum_probs=230.7
Q ss_pred CCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHH
Q ss_conf 88707987791058999999996899989999415789898989899999999999998621698489971762026338
Q gi|254780905|r 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIK 92 (271)
Q Consensus 13 ~~~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACNTasa~~~ 92 (271)
++||||||||+|||||++++++++|+++|+|+||++|+|||+||++||++++.++++||.+ +++++|||||||||+.++
T Consensus 12 ~~pIgvFDSGvGGLtvl~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~i~~~~~~~~~~l~~-~~~~~IViACNTasa~al 90 (273)
T 2oho_A 12 TRPIGFLDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVNFLLT-QNVKMIVFACNTATAVAW 90 (273)
T ss_dssp CCCEEEEESSSTTHHHHHHHHHHCTTCCEEEEECGGGCCCTTSCHHHHHHHHHHHHHHHHT-TTCSEEEECCHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH-HCCCEEEEECCCHHHHHH
T ss_conf 9988999789777999999999789989999946888998999999999999999999996-067849998285888759
Q ss_pred HHHHHHCCCCCCCCCC-HHHHHHHHHCCCCCEEEEECHHHHCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCC
Q ss_conf 9998625777654454-799999984078832998506773170168998512788579770564225787766426776
Q gi|254780905|r 93 DELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171 (271)
Q Consensus 93 ~~l~~~~~~ipiigii-~~~~~a~~~~~~~~VgiLAT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~lv~~iE~~~~~~~~ 171 (271)
+.+|+++ ++|++|++ |+++.|+..++.++||||||++|++|++|+++++++++++.|..++|+.||++||++..+
T Consensus 91 ~~lr~~~-~~piig~i~p~~k~a~~~~~~~~IgvlaT~~Ti~s~~y~~~i~~~~~~~~v~~~~c~~lV~lIE~g~~~--- 166 (273)
T 2oho_A 91 EEVKAAL-DIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKIQLLAPSIQVRSLACPKFVPIVESNEMC--- 166 (273)
T ss_dssp HHHHHHC-SSCEEESHHHHHHHHHHHCSSSEEEEEECHHHHHHTHHHHHHHHHCTTSEEEEEECTTHHHHHCC-------
T ss_pred HHHHHHC-CCCEEECCCHHHHHHHHHCCCCEEEEEECHHHHCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCC---
T ss_conf 9998647-987762562878999970656539999465454039999999865899758973486037788706336---
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHCCCCCC--CCCCCEE
Q ss_conf 97999999999846541058878998056358899999986489978982858999999999864273345--7788779
Q gi|254780905|r 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHA 249 (271)
Q Consensus 172 ~~~~~~~~l~~~l~~~~~~~~D~iILGCTHyPll~~~i~~~~~~~v~iIDpa~~va~~~~~~L~~~~~~~~--~~~~~~~ 249 (271)
.+..+..++.+|.++.. ++|++|||||||||+++.|++++++++++|||++++|++++++|.+.++.+. ...++++
T Consensus 167 -~~~~~~~~~~~L~~~~~-~~DtlILGCTHyPll~~~i~~~l~~~v~iIDpa~~va~~v~~~L~~~~l~~~~~~~~~~~~ 244 (273)
T 2oho_A 167 -SSIAKKIVYDSLAPLVG-KIDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQKAVEHR 244 (273)
T ss_dssp --HHHHHHHHHHHTTTTT-SCSEEEECSTTGGGGHHHHHHHHCTTSEEEEHHHHHHHHHHHHHHHTTCCCCTTCCCCCCE
T ss_pred -CHHHHHHHHHHHHHHHC-CCCEEEECCCCCHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCEE
T ss_conf -67899999999876422-7898997687737799999998199989996899999999999875265554458987639
Q ss_pred EEECCCHHHHHHHHHHHCCCC
Q ss_conf 996699799999999856888
Q gi|254780905|r 250 LFLSGKPDIAMRRLMQGFGLK 270 (271)
Q Consensus 250 f~~T~~~~~~~~~~~~~~G~~ 270 (271)
||+||+++.|.+.+.+|||.+
T Consensus 245 f~tT~~~~~f~~~a~~~L~~~ 265 (273)
T 2oho_A 245 FFTTANPEIFQEIASIWLKQK 265 (273)
T ss_dssp EEESSCHHHHHHHHHHHTTSC
T ss_pred EEECCCHHHHHHHHHHHCCCC
T ss_conf 998999899999999975999
No 8
>2jfn_A Glutamate racemase; cell WALL, isomerase, cell shape, UDP- murnac-Ala, peptidoglycan biosynthesis, peptidoglycan synthesis; HET: GLU UMA; 1.9A {Escherichia coli}
Probab=100.00 E-value=0 Score=516.21 Aligned_cols=252 Identities=32% Similarity=0.599 Sum_probs=231.3
Q ss_pred CEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHH
Q ss_conf 70798779105899999999689998999941578989898989999999999999862169848997176202633899
Q gi|254780905|r 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDE 94 (271)
Q Consensus 15 ~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACNTasa~~~~~ 94 (271)
||||||||+|||||+++|++++|+++|+|||||+|+|||+||+++|++++.+++++|++++++++|||||||||+.+++.
T Consensus 23 ~IgvfDSGvGGLtVl~~l~~~lP~~~~iY~~D~a~~PYG~ks~~~i~~~~~~~~~~ll~k~g~~~IViACNTasa~a~~~ 102 (285)
T 2jfn_A 23 TVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERYPLALAVVACNTASTVSLPA 102 (285)
T ss_dssp EEEEEESSSTHHHHHHHHHHHSTTSEEEEEECTTTCCTTTSCHHHHHHHHHHHHHHHHHHSCCSEEEECCHHHHHHHHHH
T ss_pred EEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH
T ss_conf 58998388358999999998789999899954787998999999999999999999986067768996064778998999
Q ss_pred HHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEECHHHHCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCHH
Q ss_conf 98625777654454799999984078832998506773170168998512788579770564225787766426776979
Q gi|254780905|r 95 LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174 (271)
Q Consensus 95 l~~~~~~ipiigii~~~~~a~~~~~~~~VgiLAT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~lv~~iE~~~~~~~~~~~ 174 (271)
||+++ ++||+||+|++++++..+++++||||||++|++|++|++.+++++++++|..++|+.||++||++..+.....+
T Consensus 103 L~~~~-~~piigiip~~~~a~~~~~~~~IgVLaT~~Ti~s~~y~~~i~~~~~~~~V~~~~~~~lv~lIE~g~~~~~~~~~ 181 (285)
T 2jfn_A 103 LREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLD 181 (285)
T ss_dssp HHHHC-SSCEECCCCCHHHHHHHCSSSEEEEEECTTGGGCHHHHHHHHHSCTTSEEEEEECHHHHHHHHHHHHTCCCCHH
T ss_pred HHHHC-CCCEECCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCHHHHH
T ss_conf 99873-99812344899999872576669998106466627999999972899689972576421344430458878999
Q ss_pred HHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECC
Q ss_conf 99999999846541058878998056358899999986489978982858999999999864273345778877999669
Q gi|254780905|r 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254 (271)
Q Consensus 175 ~~~~~l~~~l~~~~~~~~D~iILGCTHyPll~~~i~~~~~~~v~iIDpa~~va~~~~~~L~~~~~~~~~~~~~~~f~~T~ 254 (271)
.++.+++.++. ..+++|++|||||||||+++.|++++|+++++|||++++|+++.++|.++++.+....++..||+++
T Consensus 182 ~~~~~l~~~l~--~~~~~D~iILGCTHyPll~~~i~~~l~~~v~iIDpa~~vA~~~~~~L~~~~~~~~~~~~~~~f~~~~ 259 (285)
T 2jfn_A 182 ALKRILRPWLR--MKEPPDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAM 259 (285)
T ss_dssp HHHHHTHHHHT--CSSCCSEEEECSTTGGGGHHHHHHHSCTTCEEECSHHHHHHHHHHHHHHTCCSCEECSCCEEEESSC
T ss_pred HHHHHHHHHHH--CCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECC
T ss_conf 99999999985--1568876998273688899999998199989987889999999999974465445899975999858
Q ss_pred CHH--HHHHHHHHHCCCC
Q ss_conf 979--9999999856888
Q gi|254780905|r 255 KPD--IAMRRLMQGFGLK 270 (271)
Q Consensus 255 ~~~--~~~~~~~~~~G~~ 270 (271)
+++ .|.+.+ ++||++
T Consensus 260 t~~~~~~~~~~-~~~~~~ 276 (285)
T 2jfn_A 260 TPGAEQLLPVL-QRYGFE 276 (285)
T ss_dssp CHHHHTTHHHH-HHTTCC
T ss_pred CCHHHHHHHHH-HHHCCC
T ss_conf 96099999999-983997
No 9
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=100.00 E-value=0 Score=510.45 Aligned_cols=249 Identities=20% Similarity=0.268 Sum_probs=228.8
Q ss_pred CCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHH
Q ss_conf 88707987791058999999996899989999415789898989899999999999998621698489971762026338
Q gi|254780905|r 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIK 92 (271)
Q Consensus 13 ~~~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACNTasa~~~ 92 (271)
++||||||||+|||||++++++++|+++|+|+||++|+|||+||+++|++++.+++++|.+ ++|++|||||||||+.++
T Consensus 7 ~~pIgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG~ks~e~i~~~~~~~~~~l~~-~~~k~IViACNTasa~~l 85 (268)
T 3out_A 7 NRPIGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQKFAAQTAKFLID-QEVKAIIIACNTISAIAK 85 (268)
T ss_dssp TSCEEEEESSSTTHHHHHHHHHHCTTCCEEEEECTTTCCCTTSCHHHHHHHHHHHHHHHHH-TTCSEEEECCHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH-CCCCEEEEECCCHHHHHH
T ss_conf 9988999689758999999999889999899970788998989999999999999999986-599989994683889999
Q ss_pred HHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEECHHHHCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCC
Q ss_conf 99986257776544547999999840788329985067731701689985127885797705642257877664267769
Q gi|254780905|r 93 DELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172 (271)
Q Consensus 93 ~~l~~~~~~ipiigii~~~~~a~~~~~~~~VgiLAT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~lv~~iE~~~~~~~~~ 172 (271)
+.+|+.++++|++||+++..++ .++.++||||||++|++|++|+++++++++++.+..++|+.||+++|++...
T Consensus 86 ~~l~~~~~~ipiigvi~~~~~~--~~~~~~IgVLAT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~lv~liE~g~~~---- 159 (268)
T 3out_A 86 DIVQEIAKAIPVIDVITAGVSL--VDNLNTVGVIATPATINSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVS---- 159 (268)
T ss_dssp HHHHHHHTTSCEEEHHHHHHHT--TTTCSEEEEEECHHHHHHTHHHHHHHHHCTTSEEEEEECTTHHHHHHTTCCS----
T ss_pred HHHHHHCCCCCEECCCHHHHHH--HHCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCC----
T ss_conf 9999845788731574388887--7426805998246565408999999974999889813544899999850248----
Q ss_pred HHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHCCCCCCC-CCCCEEEE
Q ss_conf 79999999998465410588789980563588999999864899789828589999999998642733457-78877999
Q gi|254780905|r 173 EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALF 251 (271)
Q Consensus 173 ~~~~~~~l~~~l~~~~~~~~D~iILGCTHyPll~~~i~~~~~~~v~iIDpa~~va~~~~~~L~~~~~~~~~-~~~~~~f~ 251 (271)
.+..+..++.++.++..+++|++|||||||||+++.|++.+ ++++|||++++|+++.++|.++++.++. ..++++||
T Consensus 160 ~~~~~~~l~~~l~~l~~~~id~lVLGCTHyPll~~~i~~~~--~v~lIDpa~~vA~~v~~~L~~~~l~~~~~~~~~~~f~ 237 (268)
T 3out_A 160 GHIVELVAKEYLSYFHDKNIQALILGCTHYPIIKESIAKIL--DVKLIDPSLQASKMLYSLLFENKLLNTTKSNPEYRFY 237 (268)
T ss_dssp SHHHHHHHHHHHGGGTTSCCSEEEECSTTGGGGHHHHHHHC--CSEEECCHHHHHHHHHHHHHHTTCCCCCC-CCCEEEE
T ss_pred CHHHHHHHHHHHCHHHCCCCCEEEECCCCHHHHHHHHHHHC--CCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE
T ss_conf 75889999998474442898889991777187999999878--9859856999999999999865886667899877999
Q ss_pred ECCCHHHHHHHHHHHCCCC
Q ss_conf 6699799999999856888
Q gi|254780905|r 252 LSGKPDIAMRRLMQGFGLK 270 (271)
Q Consensus 252 ~T~~~~~~~~~~~~~~G~~ 270 (271)
+||+++.|.+.+.+|||.+
T Consensus 238 tT~~~~~f~~~a~~~l~~~ 256 (268)
T 3out_A 238 VTDIPLKFRSVGEMFLQTE 256 (268)
T ss_dssp ESCCCTTHHHHHHHHHSSC
T ss_pred ECCCHHHHHHHHHHHHCCC
T ss_conf 8999899999999980899
No 10
>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A*
Probab=100.00 E-value=0 Score=486.23 Aligned_cols=245 Identities=22% Similarity=0.290 Sum_probs=215.5
Q ss_pred CEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHH
Q ss_conf 70798779105899999999689998999941578989898989999999999999862169848997176202633899
Q gi|254780905|r 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDE 94 (271)
Q Consensus 15 ~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACNTasa~~~~~ 94 (271)
.|||||||+|||||+++|++++|+++|+|+||++|+|||+||+++|++++.++++++. +.++++|||||||||+.+++.
T Consensus 2 kIgvfDSGiGGlsvl~~l~~~lp~~~~iY~~D~a~~PYG~ks~~~i~~~~~~~~~~l~-~~~~~~IVIACNTasa~al~~ 80 (255)
T 2jfz_A 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFFK-PHEIELLIVACNTASALALEE 80 (255)
T ss_dssp EEEEEESSSTTHHHHHHHHHTTCCSEEEEEECTTTCCCTTSCHHHHHHHHHHHHHHHG-GGCCSCEEECCHHHHHHTHHH
T ss_pred EEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH-HCCCCEEEECCCHHHHHHHHH
T ss_conf 8999928976799999999878999989994478999898999999999999999999-739998997576898975699
Q ss_pred HHHHCCCCCCCCCCHHHHHHHH---HCCCCCEEEEECHHHHCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCC
Q ss_conf 9862577765445479999998---4078832998506773170168998512788579770564225787766426776
Q gi|254780905|r 95 LRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171 (271)
Q Consensus 95 l~~~~~~ipiigii~~~~~a~~---~~~~~~VgiLAT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~lv~~iE~~~~~~~~ 171 (271)
+|+.+ ++|++||++++.+++. .++.++||||||++|++|++|++++++. ++.+|..++|+.||++||++..+.
T Consensus 81 lr~~~-~ipiigvi~p~~~a~~~~~~~k~~~IgvlaT~~Ti~s~~y~~~i~~~-~~~~V~~~~~~~lv~~iE~~~~~~-- 156 (255)
T 2jfz_A 81 MQKYS-KIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATIQSNAYDNALKQQ-GYLNISHLATSLFVPLIEESILEG-- 156 (255)
T ss_dssp HHHHC-SSCEECSSHHHHHHHHHHCCCTTSCEEEEECHHHHHHTHHHHHHHHT-TCCCEEEEECTTHHHHHHTTCCSS--
T ss_pred HHHCC-CCCEEECCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHC-CCEEEEECCCHHHHHHHHHHCCCC--
T ss_conf 88446-88667676306999999861368669998455575428999998526-771576047788999998541068--
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHC------CCCCEEEECHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 979999999998465410588789980563588999999864------89978982858999999999864273345778
Q gi|254780905|r 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS------PWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245 (271)
Q Consensus 172 ~~~~~~~~l~~~l~~~~~~~~D~iILGCTHyPll~~~i~~~~------~~~v~iIDpa~~va~~~~~~L~~~~~~~~~~~ 245 (271)
+..+..++.++.++ ..++|++|||||||||+++.|++++ ++++.+|||++++|+++.+.+...+ ++...
T Consensus 157 --~~~~~~~~~~l~~l-~~~~D~lILGCTHyPll~~~i~~~~~~~v~l~~~~~~id~a~ava~~l~~~~~l~~--~~~~~ 231 (255)
T 2jfz_A 157 --ELLETCMHYYFTPL-EILPEVIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVEYLQQKYALKN--NACTF 231 (255)
T ss_dssp --HHHHHHHHHHHTTC-CSCCSEEEEESTTGGGGHHHHHHHHHHHSCCSSCCEEEEHHHHHHHHHHHHTTCCS--CSCSS
T ss_pred --HHHHHHHHHHHHHH-HCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHHC--CCCCC
T ss_conf --68999999996077-61698799917688889999999845680137886586519999999998762022--47899
Q ss_pred CCEEEEECCCHHHHHHHHHHHCCC
Q ss_conf 877999669979999999985688
Q gi|254780905|r 246 DDHALFLSGKPDIAMRRLMQGFGL 269 (271)
Q Consensus 246 ~~~~f~~T~~~~~~~~~~~~~~G~ 269 (271)
++++||+||+++.|.+.+.+||.+
T Consensus 232 ~~~~f~~Tg~~~~f~~~a~~~L~~ 255 (255)
T 2jfz_A 232 PKVEFHASGDVIWLERQAKEWLKL 255 (255)
T ss_dssp CEEEEEESSCHHHHHHHHHHHHCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC
T ss_conf 865999898989999999998484
No 11
>1b73_A Glutamate racemase; isomerase; 2.30A {Aquifex pyrophilus} SCOP: c.78.2.1 c.78.2.1 PDB: 1b74_A*
Probab=100.00 E-value=0 Score=466.41 Aligned_cols=240 Identities=22% Similarity=0.338 Sum_probs=215.3
Q ss_pred CEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHH
Q ss_conf 70798779105899999999689998999941578989898989999999999999862169848997176202633899
Q gi|254780905|r 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDE 94 (271)
Q Consensus 15 ~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACNTasa~~~~~ 94 (271)
+|||||||+|||||++++++++|+++++|+||++|+|||+||.++|++++.+++++|. +.+|++|||||||||+.+++.
T Consensus 2 kIgvfDSGiGGltv~~~l~~~~p~~~~iy~~D~~~~PYG~ks~e~i~~~~~~~~~~L~-~~~~~~IviaCNTa~a~~~~~ 80 (254)
T 1b73_A 2 KIGIFDSGVGGLTVLKAIRNRYRKVDIVYLGDTARVPYGIRSKDTIIRYSLECAGFLK-DKGVDIIVVACNTASAYALER 80 (254)
T ss_dssp EEEEEESSSGGGTHHHHHHHHSTTCEEEEEECTTTCCCTTSCHHHHHHHHHHHHHHHH-TTTCSEEEECCHHHHTTSHHH
T ss_pred EEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH-HCCCCEEEEECCCHHHHHHHH
T ss_conf 7999948986799999999978999889994688899998999999999999999999-769999999378578999999
Q ss_pred HHHHCCCCCCCCCC-HHHHHHHHHCCCCCEEEEECHHHHCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCH
Q ss_conf 98625777654454-79999998407883299850677317016899851278857977056422578776642677697
Q gi|254780905|r 95 LRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE 173 (271)
Q Consensus 95 l~~~~~~ipiigii-~~~~~a~~~~~~~~VgiLAT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~lv~~iE~~~~~~~~~~ 173 (271)
+++.+ ++|++||+ |+++.+...+++++||||||++|++|++|++.+++. +.+|...+|+.|++++|.+..+..
T Consensus 81 l~~~~-~ipvi~ii~~~~~~a~~~~~~~~VgvLAT~~Ti~s~~Y~~~l~~~--g~~v~~~~~~~lv~~ie~~~~~~~--- 154 (254)
T 1b73_A 81 LKKEI-NVPVFGVIEPGVKEALKKSRNKKIGVIGTPATVKSGAYQRKLEEG--GADVFAKACPLFAPLAEEGLLEGE--- 154 (254)
T ss_dssp HHHHS-SSCEEESHHHHHHHHHHHCSSCEEEEEECHHHHHHCHHHHHHHTT--SCEEEEEECCCCTTTSCGGGGSGG---
T ss_pred HHHHC-CCCEEECCCHHHHHHHHHCCCCEEEEEEEHHHHHCHHHHHHHHHC--CCEEEEECCHHHHHHHHCCCCCCH---
T ss_conf 99863-798760562879999972678759999606666567999999855--995996087789999983654675---
Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEC
Q ss_conf 99999999984654105887899805635889999998648997898285899999999986427334577887799966
Q gi|254780905|r 174 DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253 (271)
Q Consensus 174 ~~~~~~l~~~l~~~~~~~~D~iILGCTHyPll~~~i~~~~~~~v~iIDpa~~va~~~~~~L~~~~~~~~~~~~~~~f~~T 253 (271)
..++.++.++.++. .++|++||||||||++++.|++.++ ++++|||++++|+++.++|.+ ...++.+||+|
T Consensus 155 -~~~~~~~~~l~~l~-~~~d~iILGCTh~Pll~~~i~~~~~-~v~iIDp~~~lA~~l~~~L~~------~~~~~~~~~~T 225 (254)
T 1b73_A 155 -ITRKVVEHYLKEFK-GKIDTLILGCTHYPLLKKEIKKFLG-DAEVVDSSEALSLSLHNFIKD------DGSSSLELFFT 225 (254)
T ss_dssp -GHHHHHHHHSTTTT-TTCSEEEECCCCTTCCHHHHHHHSC-SCEEECHHHHHHHTTTTTCCC------CSCCCEEEEES
T ss_pred -HHHHHHHHHHHHHH-CCCCEEEEECCCHHHHHHHHHHHCC-CCEEEECHHHHHHHHHHHHHH------CCCCCEEEEEC
T ss_conf -78999999998643-1489899906771867999998589-985993899999999999986------59997599989
Q ss_pred CCHHHHHHHHHHHCCCC
Q ss_conf 99799999999856888
Q gi|254780905|r 254 GKPDIAMRRLMQGFGLK 270 (271)
Q Consensus 254 ~~~~~~~~~~~~~~G~~ 270 (271)
++++.|.+.+.+|||.+
T Consensus 226 ~~~~~~~~~~~~~l~~~ 242 (254)
T 1b73_A 226 DLSPNLQFLIKLILGRD 242 (254)
T ss_dssp SCCTTHHHHHHHHHSSC
T ss_pred CCCHHHHHHHHHHCCCC
T ss_conf 99889999999985999
No 12
>2zsk_A PH1733, 226AA long hypothetical aspartate racemase; alpha/beta fold, unknown function; 2.55A {Pyrococcus horikoshii}
Probab=100.00 E-value=2.3e-38 Score=273.95 Aligned_cols=207 Identities=17% Similarity=0.148 Sum_probs=160.5
Q ss_pred CEEEEECCCCHHHH------HHHHHHHC----CCCC----EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf 70798779105899------99999968----9998----9999415789898989899999999999998621698489
Q gi|254780905|r 15 SILIFDSGIGGLIV------LQKMRFLM----PEYH----FIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80 (271)
Q Consensus 15 ~IgifDSGiGGLtv------~~~l~~~l----P~~~----~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~I 80 (271)
+||| +||+++ +++|.+.. ++++ ++|.+|..+.|||.++.+++..+..+.+++| ++.||++|
T Consensus 3 ~IGI----IGGmgp~at~~~~~~i~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~L-~~~g~~~i 77 (226)
T 2zsk_A 3 KIGI----IGGTTPESTLYYYKKYIEISREKFEKYFYPELIIYSINFKEFFQNPEGWEGRKKILINAAKAL-ERAGAELI 77 (226)
T ss_dssp CEEE----EECSSHHHHHHHHHHHHHHHHHHSSTTCCCCEEEEECCTHHHHTCTTHHHHHHHHHHHHHHHH-HHHTCSEE
T ss_pred EEEE----EECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHH-HHCCCCEE
T ss_conf 7999----507587999999999999868762887788589980780220114788769999999999999-98699999
Q ss_pred EEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEECHHHHCCHHHHHHHHHCCCCCEEEECCCCC-HH
Q ss_conf 97176202633899986257776544547999999840788329985067731701689985127885797705642-25
Q gi|254780905|r 81 VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMI-LA 159 (271)
Q Consensus 81 VIACNTasa~~~~~l~~~~~~ipiigii~~~~~a~~~~~~~~VgiLAT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~-lv 159 (271)
||||||||+. .+.+++++ ++|++||++++..++..++.++||||||++|++|++|++.+++.+.++.+....+.. +.
T Consensus 78 viaCNTah~~-~~~l~~~~-~ipii~ii~~~~~~~~~~~~~~igvlaT~~T~~s~~y~~~l~~~~~~~~~p~~~~~~~~~ 155 (226)
T 2zsk_A 78 AFAANTPHLV-FDDVQREV-NVPMVSIIDAVAEEILKRGVRKVLLLGTKTTMTADFYIKTLEEKGLEVVVPNDEEKEELN 155 (226)
T ss_dssp EESSSGGGGG-HHHHHHHC-SSCBCCHHHHHHHHHHHTTCCEEEEESSTTTTSCHHHHHHHHTTTCEEECCCHHHHHHHH
T ss_pred EEECCHHHHH-HHHHHHHC-CCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEECCHHHHHHHH
T ss_conf 9836088887-99999865-999434424899999863787269985045055257899999739917955878733332
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHH
Q ss_conf 787766426776979999999998465410588789980563588999999864899789828589999999998
Q gi|254780905|r 160 SRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234 (271)
Q Consensus 160 ~~iE~~~~~~~~~~~~~~~~l~~~l~~~~~~~~D~iILGCTHyPll~~~i~~~~~~~v~iIDpa~~va~~~~~~L 234 (271)
..+++....+..... ...++.+...+..+++|++|||||||||+.+.+ +.++++|||++.+|+++.++-
T Consensus 156 ~~i~~~~~~~~~~~~--~~~~~~~~~~l~~~~~d~iILGCTh~pll~~~~----~~~~~~iD~~~~la~~~v~~A 224 (226)
T 2zsk_A 156 RIIFEELAFGNLKNK--EWIVRLIEKYRESEGIEGVILGCTELPLAIKQG----DVSVEVFDSAEIHMRKLIELA 224 (226)
T ss_dssp HHHHHTGGGTCCTTH--HHHHHHHHHHHHHSCCSEEEECSSSGGGTCCGG----GSSSEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHH--HHHHHHHHHHHHHCCCCEEEECCCCHHHHHCCC----CCCCCEECCHHHHHHHHHHHH
T ss_conf 478766512760589--999999898887779798999688988863310----489988863999999999986
No 13
>3ojc_A Putative aspartate/glutamate racemase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 1.75A {Yersinia pestis}
Probab=100.00 E-value=2.9e-37 Score=266.68 Aligned_cols=208 Identities=14% Similarity=0.124 Sum_probs=158.4
Q ss_pred CCEEEEECCCCHHHH------HHHHHHHCC----CCC----EEEEECCCCC--CCCCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 870798779105899------999999689----998----9999415789--898989899999999999998621698
Q gi|254780905|r 14 NSILIFDSGIGGLIV------LQKMRFLMP----EYH----FIYVADDVGF--PYGNWEDHALKKRLMFLFSDILDKYQP 77 (271)
Q Consensus 14 ~~IgifDSGiGGLtv------~~~l~~~lP----~~~----~iY~~D~~~~--PYG~ks~~~I~~~~~~~~~~ll~k~~~ 77 (271)
+.||| +||+++ ++.|.+..| +++ ++|.+|..+. ||++++.+.+..+..+++.+|. +.||
T Consensus 3 k~IGI----iGGmgp~at~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~-~~g~ 77 (231)
T 3ojc_A 3 KILGL----IGGMSWESTIPYYRMINQHVKAQLGGLHSAKIILYSVDFHEIEQLQAKGDWQTAAQLLSNAAISLK-HAGA 77 (231)
T ss_dssp CCEEE----EECTTHHHHHHHHHHHHHHHHHHHCTTCCCCEEEEECCHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HHTC
T ss_pred CEEEE----ECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-HCCC
T ss_conf 76999----706388999999999999988754776786689953885321002346881069999999999999-7699
Q ss_pred CEEEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEECHHHHCCHHHHHHHHH-CCCCCEEEECCCC
Q ss_conf 489971762026338999862577765445479999998407883299850677317016899851-2788579770564
Q gi|254780905|r 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHS-YVSQCHIHLVSSM 156 (271)
Q Consensus 78 ~~IVIACNTasa~~~~~l~~~~~~ipiigii~~~~~a~~~~~~~~VgiLAT~~Ti~s~~y~~~i~~-~~~~~~v~~~~~~ 156 (271)
++|||||||+|+.+ +.+++++ ++|++||++++..++..++.++||||||++|++|++|++.+.+ .+..+.+......
T Consensus 78 ~~iviaCNTah~~~-~~l~~~~-~ipii~ii~~~~~~~~~~~~~~IgvlaT~~T~~s~~Y~~~l~~~~~~~~~~p~~~~~ 155 (231)
T 3ojc_A 78 EVIVVCTNTMHKVA-DDIEAAC-GLPLLHIADATAVQIKQQGIDKIGLLGTRYTMEQGFYRGRLTEKHGIEVITPDDTDR 155 (231)
T ss_dssp CEEEECSSGGGGGH-HHHHHHH-CSCBCCHHHHHHHHHHHTTCCEEEEESCHHHHHSTTTHHHHHHTTCCEEECCCHHHH
T ss_pred CEEEECCHHHHHHH-HHHHHHC-CCCCEECCHHHHHHHHHCCCCCEEEEEHHHHHCCHHHHHHHHHHCCCCEECCCHHHH
T ss_conf 99997636889999-9999863-999545344799999974898679984473615588999999876994675789999
Q ss_pred C-HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHH
Q ss_conf 2-2578776642677697999999999846541058878998056358899999986489978982858999999999
Q gi|254780905|r 157 I-LASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 (271)
Q Consensus 157 ~-lv~~iE~~~~~~~~~~~~~~~~l~~~l~~~~~~~~D~iILGCTHyPll~~~i~~~~~~~v~iIDpa~~va~~~~~~ 233 (271)
. ..+.+.+....+... +..+..+..++..+..+++|++||||||||++.+.+ ..++++|||++.+|+++.++
T Consensus 156 ~~~~~~i~~~~~~g~~~-~~~~~~~~~~~~~l~~~~~d~iILGCTh~pl~~~~~----~~~~~~iD~~~~lA~~~v~~ 228 (231)
T 3ojc_A 156 EAVNRIIYEELCLGIIS-ETSRDAYRRVIKKLEAQGVQGIIFGCTEITLLVNAQ----DASVPVFDTTAIHASAAADY 228 (231)
T ss_dssp HHHHHHHHHTGGGTCCC-HHHHHHHHHHHHHHHHTTCSCEEECSGGGGGTCCGG----GCSSCEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCC-HHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHH----CCCCCEECCHHHHHHHHHHH
T ss_conf 99999999999828998-899999999999998589898998478877662234----28998875799999999999
No 14
>1jfl_A Aspartate racemase; alpha-beta structure, HOMO-dimer, homologous domains, isomerase; 1.90A {Pyrococcus horikoshii OT3} SCOP: c.78.2.1 c.78.2.1 PDB: 2dx7_A* 1iu9_A
Probab=100.00 E-value=4.2e-36 Score=258.95 Aligned_cols=206 Identities=15% Similarity=0.187 Sum_probs=159.2
Q ss_pred CEEEEECCCCHHH------HHHHHHHHCCCC----C-EEEEECCCCCC----CCCCCHHHHHHHHHHHHHHHHHCCCCCE
Q ss_conf 7079877910589------999999968999----8-99994157898----9898989999999999999862169848
Q gi|254780905|r 15 SILIFDSGIGGLI------VLQKMRFLMPEY----H-FIYVADDVGFP----YGNWEDHALKKRLMFLFSDILDKYQPVL 79 (271)
Q Consensus 15 ~IgifDSGiGGLt------v~~~l~~~lP~~----~-~iY~~D~~~~P----YG~ks~~~I~~~~~~~~~~ll~k~~~~~ 79 (271)
+||| +||++ .++.|.+..+.. + .+++-+...+| |+.++.+++..+..+.+.+| ++.||++
T Consensus 3 ~IGI----iGG~gp~at~~~~~~i~~~~~~~~d~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L-~~~g~~~ 77 (228)
T 1jfl_A 3 TIGI----LGGMGPLATAELFRRIVIKTPAKRDQEHPKVIIFNNPQIPDRTAYILGKGEDPRPQLIWTAKRL-EECGADF 77 (228)
T ss_dssp CEEE----EECSSHHHHHHHHHHHHHTCCCSSGGGSCCEEEEECTTSCCHHHHHTTSSCCCHHHHHHHHHHH-HHHTCSE
T ss_pred EEEE----EECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHH-HHCCCCE
T ss_conf 8999----5277979999999999999987558867806778678777788987443156999999999999-9769999
Q ss_pred EEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEECHHHHCCHHHHHHHHHCCCCCEEEECCCCCHH
Q ss_conf 99717620263389998625777654454799999984078832998506773170168998512788579770564225
Q gi|254780905|r 80 SVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA 159 (271)
Q Consensus 80 IVIACNTasa~~~~~l~~~~~~ipiigii~~~~~a~~~~~~~~VgiLAT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~lv 159 (271)
|||||||||+.+ +.+++.+ ++|++||++++..++..++.++||||||++|++|++|++.+.+.+..+.+...+++.++
T Consensus 78 iviaCNTah~~~-~~l~~~~-~ipii~ii~~~~~~~~~~~~~~vgvlaT~~T~~s~~y~~~l~~~~~~~~~~~~~~~~~~ 155 (228)
T 1jfl_A 78 IIMPCNTAHAFV-EDIRKAI-KIPIISMIEETAKKVKELGFKKAGLLATTGTIVSGVYEKEFSKYGVEIMTPTEDEQKDV 155 (228)
T ss_dssp EECSCTGGGGGH-HHHHHHC-SSCBCCHHHHHHHHHHHTTCSEEEEECCHHHHHHTHHHHHHHHTTCEEECCCHHHHHHH
T ss_pred EEEECHHHHHHH-HHHHHHC-CCCCEEECHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHCCCCEEECCHHHHHHH
T ss_conf 999462899999-9999865-99935313188999986388713898537625420799999983996363476666899
Q ss_pred HHHH-HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHH
Q ss_conf 7877-6642677697999999999846541058878998056358899999986489978982858999999999
Q gi|254780905|r 160 SRVE-EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233 (271)
Q Consensus 160 ~~iE-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~D~iILGCTHyPll~~~i~~~~~~~v~iIDpa~~va~~~~~~ 233 (271)
..++ +....+ .....++.+..++.++..+++|++|||||||||+.+.++ .++++|||++.+|+++.++
T Consensus 156 ~~~i~~~~~~g--~~~~~~~~~~~~~~~l~~~~~d~iILGCTh~pll~~~~~----~~~~~iD~~~~~a~~~v~~ 224 (228)
T 1jfl_A 156 MRGIYEGVKAG--NLKLGRELLLKTAKILEERGAECIIAGCTEVSVVLKQDD----LKVPLIDPMDVIAEVAVKV 224 (228)
T ss_dssp HHHHHTTGGGT--CHHHHHHHHHHHHHHHHHTTCSEEEECSHHHHHHCCGGG----CSSCEECHHHHHHHHHHHH
T ss_pred HHHHHHHHHCC--CHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHC----CCCCEECCHHHHHHHHHHH
T ss_conf 99999887617--636689999999999986796989996888788750242----7998887399999999999
No 15
>2eq5_A 228AA long hypothetical hydantoin racemase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.20A {Pyrococcus horikoshii OT3}
Probab=99.85 E-value=1.9e-20 Score=154.85 Aligned_cols=192 Identities=15% Similarity=0.178 Sum_probs=132.6
Q ss_pred HHHHHHCCCCCEE--EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCC
Q ss_conf 9999968999899--99415789898989899999999999998621698489971762026338999862577765445
Q gi|254780905|r 30 QKMRFLMPEYHFI--YVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA 107 (271)
Q Consensus 30 ~~l~~~lP~~~~i--Y~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACNTasa~~~~~l~~~~~~ipiigi 107 (271)
+-+...+|...+. .+.|.-...+|..+.+.......+.+.++ ++.|+|+|||||||++ +++.+|+.+ ++||+|+
T Consensus 28 r~~~~~~p~v~v~~~~ipd~p~~I~~~~~~~~~~p~l~~~~~~l-e~~g~DaivIaC~t~~--~l~~~r~~~-~iPVig~ 103 (228)
T 2eq5_A 28 RIIESAFPELKVVSRCIEDQPKGIYNEETEREAEPKIIRLAKEF-EREGVDAIIISCAADP--AVEKVRKLL-SIPVIGA 103 (228)
T ss_dssp HHHHHHCTTEEEEEEECSSCTTCCSSHHHHHHHHHHHHHHHHHH-HHTTCSEEEECSTTCT--THHHHHHHC-SSCEEEH
T ss_pred HHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HHCCCCEEEEECCCHH--HHHHHHHHC-CCCEECC
T ss_conf 88875489966997479999876778315766379999999999-8779989999068759--999999865-9985563
Q ss_pred CHHHHHHHHHCCCCCEEEEECHHHHCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 47999999840788329985067731701689985127885797705642257877664267769799999999984654
Q gi|254780905|r 108 VPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187 (271)
Q Consensus 108 i~~~~~a~~~~~~~~VgiLAT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~lv~~iE~~~~~~~~~~~~~~~~l~~~l~~~ 187 (271)
.++...++... .+++|+++|..|.... +.+.+.... ....++......+.+. .+..+..+..++..+
T Consensus 104 ~ea~~~~a~~~-g~~~~vi~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~~~~~~------~~~~~~~l~~~~~~l 170 (228)
T 2eq5_A 104 GSSVSALALAY-GRRVGVLNLTEETPKV-IRSILGNNL-----IAEDHPSGVSNTLDLL------TDWGRREVINAAKRL 170 (228)
T ss_dssp HHHHHHHHHTT-CSSEEEECSSSCCCHH-HHHHHGGGE-----EEEECCTTCCSGGGGG------SHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-CCCCEEEECCCCHHHH-HHHHHHHHC-----CCCCCCCCEEECCCCC------CHHHHHHHHHHHHHH
T ss_conf 18899999983-8874475233003899-999998734-----4665553134211124------678999999999999
Q ss_pred HCCCCCEEEECCCCHHHH--HHHHHHHCCCCCEEEECHHHHHHHHHHHHHHCCCC
Q ss_conf 105887899805635889--99999864899789828589999999998642733
Q gi|254780905|r 188 EGKRTDVIVLACTHYPLI--VHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240 (271)
Q Consensus 188 ~~~~~D~iILGCTHyPll--~~~i~~~~~~~v~iIDpa~~va~~~~~~L~~~~~~ 240 (271)
.++++|++||||||||++ ...+++.++ |++|||.++.++.+...+...+..
T Consensus 171 ~~~gadaiiLGCT~~~~~~~~~~l~~~~g--vpVIDp~~a~~~~a~~~l~~~~~~ 223 (228)
T 2eq5_A 171 KEKGVEVIALGCTGMSTIGIAPVLEEEVG--IPVIDPVIASGAVALHALKRREVK 223 (228)
T ss_dssp HHTTCSEEEECCTHHHHHTCHHHHHHHHS--SCEECHHHHHHHHHHHHHHTC---
T ss_pred HHCCCCEEEECCCCCHHHHHHHHHHCCCC--CEEECCHHHHHHHHHHHHHHHCCC
T ss_conf 86699889981787024555798730699--779866999999999997210145
No 16
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=99.00 E-value=3.6e-08 Score=73.17 Aligned_cols=207 Identities=11% Similarity=0.020 Sum_probs=128.1
Q ss_pred CCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHH---HHHHHHHHCCCCCEEEEECCCCCH
Q ss_conf 88707987791058999999996899989999415789898989899999999---999998621698489971762026
Q gi|254780905|r 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM---FLFSDILDKYQPVLSVIACNTAFT 89 (271)
Q Consensus 13 ~~~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~I~~~~~---~~~~~ll~k~~~~~IVIACNTasa 89 (271)
.+.||+.=-. ---++=.++.+.+|+..++ +.|+|++.-+++.+.+... +... .+...++|+|+.+|.++|.
T Consensus 6 ~~~iGlivP~-~n~~vE~e~~~~~p~v~~~----~~R~~~~~~t~e~l~~~~~~l~~aa~-~l~~~~~d~I~~gCTs~s~ 79 (240)
T 3ixl_A 6 TPTIGMIVPP-AAGLVPADGARLYPDLPFI----ASGLGLGSVTPEGYDAVIESVVDHAR-RLQKQGAAVVSLMCTSLSF 79 (240)
T ss_dssp CCEEEEEESS-TTCCCCTHHHHHCTTSCEE----EEECCCCCSSHHHHHHHGGGHHHHHH-HHHHTTEEEEEECCHHHHH
T ss_pred CCEEEEEECC-CCCCHHHHHHHHCCCCCEE----EEECCCCCCCHHHHHHHHHHHHHHHH-HHCCCCCCEEEECCCHHHH
T ss_conf 9816899789-8870669999865998668----62068899898999999999999999-8525799999976868999
Q ss_pred HH--------HHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEECHHHH-CCHHHHHHHHHCCCCCEEEECCCCCHHH
Q ss_conf 33--------89998625777654454799999984078832998506773-1701689985127885797705642257
Q gi|254780905|r 90 LI--------KDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL-RRTYTSNLIHSYVSQCHIHLVSSMILAS 160 (271)
Q Consensus 90 ~~--------~~~l~~~~~~ipiigii~~~~~a~~~~~~~~VgiLAT~~Ti-~s~~y~~~i~~~~~~~~v~~~~~~~lv~ 160 (271)
.. .+.+++. .++|++....++..|....+.++|+++.. .+= -...-.+.++.. +.+|....+-....
T Consensus 80 ~~G~~~~~~~~~~i~~~-~g~pv~t~~~A~~~Al~~lg~krIav~tP-Y~~~~~~~~~~~~~~~--G~~V~~~~~~~~~~ 155 (240)
T 3ixl_A 80 YRGAAFNAALTVAMREA-TGLPCTTMSTAVLNGLRALGVRRVALATA-YIDDVNERLAAFLAEE--SLVPTGCRSLGITG 155 (240)
T ss_dssp TTCHHHHHHHHHHHHHH-HSSCEEEHHHHHHHHHHHTTCSEEEEEES-SCHHHHHHHHHHHHHT--TCEEEEEEECCCCC
T ss_pred HCCCHHHHHHHHHHHHC-CCCCEECHHHHHHHHHHHCCCCCEEECCC-CHHHHHHHHHHHHHHC--CCCCCCEEEECCCC
T ss_conf 52716799999988745-79961067999999999809986454367-6489999999999973--98623223556776
Q ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHH--HHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHC
Q ss_conf 8776642677697999999999846541058878998056358--8999999864899789828589999999998642
Q gi|254780905|r 161 RVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYP--LIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237 (271)
Q Consensus 161 ~iE~~~~~~~~~~~~~~~~l~~~l~~~~~~~~D~iILGCTHyP--ll~~~i~~~~~~~v~iIDpa~~va~~~~~~L~~~ 237 (271)
.-+.. ..+.+.+........ ....++|+|++.||.+| -+.+.+++.++ .++|++..+++-++.+.++-.
T Consensus 156 ~~~~~----~~~~~~~~~~~~~~~--~~~pd~daI~iscT~~~t~~~i~~lE~~lg--~PVissn~a~~W~~Lr~~Gi~ 226 (240)
T 3ixl_A 156 VEAMA----RVDTATLVDLCVRAF--EAAPDSDGILLSSGGLLTLDAIPEVERRLG--VPVVSSSPAGFWDAVRLAGGG 226 (240)
T ss_dssp HHHHH----TCCHHHHHHHHHHHH--HTSTTCSEEEEECTTSCCTTHHHHHHHHHS--SCEEEHHHHHHHHHHHHTTSC
T ss_pred CCCCC----EECHHHHHHHHHHHH--HCCCCCCEEEEECCCCHHHHHHHHHHHHHC--CCEEEHHHHHHHHHHHHCCCC
T ss_conf 65332----347877999999987--338887689985788618899999999989--899972999999999985999
No 17
>2xed_A Putative maleate isomerase; nicotinic acid catabolism, cofactor-independent CIS-trans isomerase; 1.95A {Nocardia farcinica} PDB: 2xec_A
Probab=98.18 E-value=0.00023 Score=47.86 Aligned_cols=196 Identities=13% Similarity=0.088 Sum_probs=119.9
Q ss_pred HHHHHHHHHCC---CCCEEEEECCCCCCCCCCCHHHHHHHHH---HHHHHHHHCCCCCEEEEECCCCCHHH--------H
Q ss_conf 99999999689---9989999415789898989899999999---99999862169848997176202633--------8
Q gi|254780905|r 27 IVLQKMRFLMP---EYHFIYVADDVGFPYGNWEDHALKKRLM---FLFSDILDKYQPVLSVIACNTAFTLI--------K 92 (271)
Q Consensus 27 tv~~~l~~~lP---~~~~iY~~D~~~~PYG~ks~~~I~~~~~---~~~~~ll~k~~~~~IVIACNTasa~~--------~ 92 (271)
++=.+..+.+| ..++-+. +.|+|-.+-+.+...+... +....+ ....++.|+.+|-.+|... .
T Consensus 38 ~vE~E~~~m~~~~~~~~v~~h--~sRi~~~~~t~e~l~~m~~~l~~a~~~l-~~~~~d~I~~gcTsas~~~G~~~~~~~~ 114 (273)
T 2xed_A 38 TVETEMPALLSRHPGAEFSFH--STRMRMHTVSPEGLAAMNAQRERCVLEI-ADAAPEVILYACLVAVMVGGPGEHHRVE 114 (273)
T ss_dssp SHHHHHHHHHTTCSSCCEEEE--EEEECCCBCSHHHHHHHHTTHHHHHHHH-HTTCCSEEEECCHHHHHTTCTTHHHHHH
T ss_pred CHHHHHHHHHHHCCCCCEEEE--EECCCCCCCCHHHHHHHHHHHHHHHHHH-HCCCCCEEEEECCHHEEECCCHHHHHHH
T ss_conf 269999998744899737999--5023269999889999887689999864-2046677887043001452750778999
Q ss_pred HHHHHH----CCCCCCCCCCHHHHHHHHHCCCCCEEEEECHHHHC-CHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHH
Q ss_conf 999862----57776544547999999840788329985067731-7016899851278857977056422578776642
Q gi|254780905|r 93 DELRST----FPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR-RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC 167 (271)
Q Consensus 93 ~~l~~~----~~~ipiigii~~~~~a~~~~~~~~VgiLAT~~Ti~-s~~y~~~i~~~~~~~~v~~~~~~~lv~~iE~~~~ 167 (271)
+.+.++ .+++|++....++..|....+.++|+++ ||.+=. .....+.+++. +.+|.....-......+ +
T Consensus 115 ~~i~~~i~~~~~~~pv~t~~~Ai~~AL~~lgakrIall-TPY~~~v~~~~~~~~~~~--G~eV~~~~~l~~~~~~~--i- 188 (273)
T 2xed_A 115 SAVAEQLATGGSQALVRSSAGALVEGLRALDAQRVALV-TPYMRPLAEKVVAYLEAE--GFTISDWRALEVADNTE--V- 188 (273)
T ss_dssp HHHHHHHHHTTCCCEEEEHHHHHHHHHHHTTCCEEEEE-ECSCHHHHHHHHHHHHHT--TCEEEEEEECCCCBHHH--H-
T ss_pred HHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEE-CCCCHHHHHHHHHHHHHC--CEEEEEEEEECCCCCCE--E-
T ss_conf 99999985169998422789999999996499857997-479789999999999967--82365555304677742--4-
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCC-CHH--HHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHCC
Q ss_conf 677697999999999846541058878998056-358--89999998648997898285899999999986427
Q gi|254780905|r 168 GIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT-HYP--LIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 (271)
Q Consensus 168 ~~~~~~~~~~~~l~~~l~~~~~~~~D~iILGCT-HyP--ll~~~i~~~~~~~v~iIDpa~~va~~~~~~L~~~~ 238 (271)
..++.+.+... +.++...++|+|++.|| -+| -+.+.+++.++ +++|+++.+++=++.+.++-.+
T Consensus 189 -a~i~~~~i~~a----~~~~~~~~~DAI~IsCttnl~t~~ii~~lE~~lG--~PVisSNqa~~W~~LR~~Gi~~ 255 (273)
T 2xed_A 189 -GCIPGEQVMAA----ARSLDLSEVDALVISCAVQMPSLPLVETAEREFG--IPVLSAATAGAYSILRSLDLPV 255 (273)
T ss_dssp -HTCCHHHHHHH----HHHSCCTTCSEEEEESSSSSCCTTHHHHHHHHHS--SCEEEHHHHHHHHHHHHTTCCC
T ss_pred -ECCCHHHHHHH----HHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHC--CCEEEEHHHHHHHHHHHCCCCC
T ss_conf -31599999999----9985255898699984788767789999999879--9989608999999999869998
No 18
>2dgd_A 223AA long hypothetical arylmalonate decarboxylase; octamer, alpha/beta structure, lyase; 2.90A {Sulfolobus tokodaii}
Probab=96.84 E-value=0.03 Score=33.84 Aligned_cols=195 Identities=10% Similarity=0.004 Sum_probs=112.5
Q ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCCC-CC---HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCC
Q ss_conf 89999999968999899994157898989-89---899999999999998621698489971762026338999862577
Q gi|254780905|r 26 LIVLQKMRFLMPEYHFIYVADDVGFPYGN-WE---DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS 101 (271)
Q Consensus 26 Ltv~~~l~~~lP~~~~iY~~D~~~~PYG~-ks---~~~I~~~~~~~~~~ll~k~~~~~IVIACNTasa~~~~~l~~~~~~ 101 (271)
.++=.++.+.+|+ ++-.+ +.|+|... -+ -++......... .++.. .+|.|+.+|-+.|...-+ +.++. .
T Consensus 17 ~~vE~e~~~m~p~-gV~~h--~sRi~~~~~~~~e~l~~m~~~l~~a~-~l~~~-~~d~i~~gcTsgs~~~~~-~~~~~-~ 89 (223)
T 2dgd_A 17 AGMEYDLWKMAPE-GVSIH--STRMKPTKGCEPENVEEFEKELKYSY-SLLAE-VSDIIIYGRTYGTHKHAH-VIKRV-I 89 (223)
T ss_dssp CSHHHHHHHHCCT-TEEEE--EEEECCCSSSSCSCHHHHHHHHHHHH-HHHTT-TCSEEEECCCTTTTTCHH-HHHHH-S
T ss_pred CCHHHHHHHHCCC-CCEEE--EECCCCCCCCCHHHHHHHHHHHHHHH-HHCCC-CCCEEEECCCCCHHHHHH-HHHHC-C
T ss_conf 7479999986678-81699--76775789888778999987668888-64455-457678778886256778-98853-4
Q ss_pred CCCCCCCHHHHHHHHHCCCCCEEEEECHHHHC-CHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 76544547999999840788329985067731-70168998512788579770564225787766426776979999999
Q gi|254780905|r 102 MAFLGAVPAIKQAAAYTQSGLISILSTPATLR-RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180 (271)
Q Consensus 102 ipiigii~~~~~a~~~~~~~~VgiLAT~~Ti~-s~~y~~~i~~~~~~~~v~~~~~~~lv~~iE~~~~~~~~~~~~~~~~l 180 (271)
.|++....++..|....+.++|+++ ||.+=. .....+.++.. +.+|.....-....-.+-. ....+.+...+
T Consensus 90 ~~~~~~~~A~~~AL~~lg~krIav~-TPY~~~v~~~~~~~~~~~--G~eVv~~~~l~~~~~~~i~----~~~~~~i~~~~ 162 (223)
T 2dgd_A 90 KDVVIPEESVYELLKKLNVRKLWIG-TPYIKERTLEEVEWWRNK--GFEIVGYDGLGKIRGIDIS----NTPIFTIYRLV 162 (223)
T ss_dssp TTCBCHHHHHHHHHHHTTCCEEEEE-ESSCHHHHHHHHHHHHTT--TCEEEEEEECCCCSHHHHH----TCCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHCCCCEEEEE-CCCCHHHHHHHHHHHHHC--CEEEEEECCCCCCCCCCCC----CCCHHHHHHHH
T ss_conf 7656879999999997299807996-788657789999999967--9137520204877654202----39999999999
Q ss_pred HHHHHHHHCCCCCEEEECCCCHHH--HHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHCC
Q ss_conf 998465410588789980563588--9999998648997898285899999999986427
Q gi|254780905|r 181 EGCFIEKEGKRTDVIVLACTHYPL--IVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238 (271)
Q Consensus 181 ~~~l~~~~~~~~D~iILGCTHyPl--l~~~i~~~~~~~v~iIDpa~~va~~~~~~L~~~~ 238 (271)
+.... ...++|++++.||-+|- +.+.+++.++ .++|++..+++=++.+.++..+
T Consensus 163 ~~~~~--~~~~adav~iscT~l~t~~~i~~lE~~lg--~PVisSNqa~~W~~Lr~~Gi~~ 218 (223)
T 2dgd_A 163 KRHLN--EVLKADAVYIACTALSTYEAVQYLHEDLD--MPVVSENAAAMWEALNKLKIKA 218 (223)
T ss_dssp HTTHH--HHTTSSEEEECCTTSCCTTHHHHHHHHHT--SCEEEHHHHHHHHHHHHHTCCC
T ss_pred HHHHC--CCCCCCEEEEECCCCCHHHHHHHHHHHHC--CCEEEHHHHHHHHHHHHCCCCC
T ss_conf 99741--14578789994158638889999999989--8999789999999999859998
No 19
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=94.53 E-value=0.056 Score=32.06 Aligned_cols=45 Identities=16% Similarity=0.354 Sum_probs=41.0
Q ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCC
Q ss_conf 463488707987791058999999996899989999415789898
Q gi|254780905|r 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG 53 (271)
Q Consensus 9 ~~~~~~~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG 53 (271)
+.+|+.+|.|.-+|.+|||..++|++.-++.+++-+.+..+.||.
T Consensus 3 ~~~m~~~VVIIGgG~AGl~aA~~Lr~~~~~~~Itli~~e~~~~Y~ 47 (408)
T 2gqw_A 3 QEALKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYD 47 (408)
T ss_dssp ---CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBC
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC
T ss_conf 557889999989889999999999653958809999698887775
No 20
>2eq5_A 228AA long hypothetical hydantoin racemase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.20A {Pyrococcus horikoshii OT3}
Probab=94.15 E-value=0.12 Score=29.83 Aligned_cols=105 Identities=15% Similarity=0.149 Sum_probs=61.8
Q ss_pred CCCCEEEEECHHHHCCHHHH---HHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf 78832998506773170168---998512788579770564225787766426776979999999998465410588789
Q gi|254780905|r 119 QSGLISILSTPATLRRTYTS---NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195 (271)
Q Consensus 119 ~~~~VgiLAT~~Ti~s~~y~---~~i~~~~~~~~v~~~~~~~lv~~iE~~~~~~~~~~~~~~~~l~~~l~~~~~~~~D~i 195 (271)
+..++|++.|..|....+.+ +.+....+++.+....-|+=-..|+.. .+.......+-.....+...++|.+
T Consensus 5 ~~~~igli~~~~~~d~~~~~~~~r~~~~~~p~v~v~~~~ipd~p~~I~~~-----~~~~~~~p~l~~~~~~le~~g~Dai 79 (228)
T 2eq5_A 5 DKYTIGLIRVITLEDKEILNLHGRIIESAFPELKVVSRCIEDQPKGIYNE-----ETEREAEPKIIRLAKEFEREGVDAI 79 (228)
T ss_dssp -CEEEEEEESSCCCCHHHHTHHHHHHHHHCTTEEEEEEECSSCTTCCSSH-----HHHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred CCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCH-----HHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 55068999704566478899999888754899669974799998767783-----1576637999999999987799899
Q ss_pred EECCCCHHHHHHHHHHHCCCCCEEEECHHHHHHHHH
Q ss_conf 980563588999999864899789828589999999
Q gi|254780905|r 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231 (271)
Q Consensus 196 ILGCTHyPll~~~i~~~~~~~v~iIDpa~~va~~~~ 231 (271)
+++|+-=|++ +.+++.+ +++++.+.++......
T Consensus 80 vIaC~t~~~l-~~~r~~~--~iPVig~~ea~~~~a~ 112 (228)
T 2eq5_A 80 IISCAADPAV-EKVRKLL--SIPVIGAGSSVSALAL 112 (228)
T ss_dssp EECSTTCTTH-HHHHHHC--SSCEEEHHHHHHHHHH
T ss_pred EEECCCHHHH-HHHHHHC--CCCEECCHHHHHHHHH
T ss_conf 9906875999-9999865--9985563188999999
No 21
>3ojc_A Putative aspartate/glutamate racemase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 1.75A {Yersinia pestis}
Probab=94.02 E-value=0.34 Score=26.83 Aligned_cols=59 Identities=12% Similarity=0.105 Sum_probs=45.1
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECHHHHHHHHHH
Q ss_conf 9799999999984654105887899805635889999998648997898285899999999
Q gi|254780905|r 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232 (271)
Q Consensus 172 ~~~~~~~~l~~~l~~~~~~~~D~iILGCTHyPll~~~i~~~~~~~v~iIDpa~~va~~~~~ 232 (271)
+.+.....+......+...++|.+++.|.---...+.+++.+ ++++++-.+.++.++..
T Consensus 57 ~~~~~~~~l~~~~~~L~~~g~~~iviaCNTah~~~~~l~~~~--~ipii~ii~~~~~~~~~ 115 (231)
T 3ojc_A 57 DWQTAAQLLSNAAISLKHAGAEVIVVCTNTMHKVADDIEAAC--GLPLLHIADATAVQIKQ 115 (231)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCEEEECSSGGGGGHHHHHHHH--CSCBCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHC--CCCCEECCHHHHHHHHH
T ss_conf 810699999999999997699999976368899999999863--99954534479999997
No 22
>2zsk_A PH1733, 226AA long hypothetical aspartate racemase; alpha/beta fold, unknown function; 2.55A {Pyrococcus horikoshii}
Probab=92.60 E-value=0.43 Score=26.18 Aligned_cols=100 Identities=14% Similarity=0.072 Sum_probs=60.6
Q ss_pred CCEEEEECHHHHCC-HHHHHHHHHC---C-----CCCEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf 83299850677317-0168998512---7-----8857977056422578776642677697999999999846541058
Q gi|254780905|r 121 GLISILSTPATLRR-TYTSNLIHSY---V-----SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191 (271)
Q Consensus 121 ~~VgiLAT~~Ti~s-~~y~~~i~~~---~-----~~~~v~~~~~~~lv~~iE~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 191 (271)
++|||+|--+...+ .+|++..+.. . +...++.. ...... .+ ..+.+....++......+...+
T Consensus 2 k~IGIIGGmgp~at~~~~~~i~~~~~~~~~~~~~~~~~i~~~---d~~~~~----~~-~~~~~~~~~~~~~~~~~L~~~g 73 (226)
T 2zsk_A 2 KKIGIIGGTTPESTLYYYKKYIEISREKFEKYFYPELIIYSI---NFKEFF----QN-PEGWEGRKKILINAAKALERAG 73 (226)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHHHHHHSSTTCCCCEEEEEC---CTHHHH----TC-TTHHHHHHHHHHHHHHHHHHHT
T ss_pred CEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC---CHHHHH----CC-CCCHHHHHHHHHHHHHHHHHCC
T ss_conf 779995075879999999999998687628877885899807---802201----14-7887699999999999999869
Q ss_pred CCEEEECC--CCHHHHHHHHHHHCCCCCEEEECHHHHHHHHHH
Q ss_conf 87899805--635889999998648997898285899999999
Q gi|254780905|r 192 TDVIVLAC--THYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232 (271)
Q Consensus 192 ~D~iILGC--THyPll~~~i~~~~~~~v~iIDpa~~va~~~~~ 232 (271)
+|.+++.| .|+ ..+.+++.+ ++++++-.+.++.++..
T Consensus 74 ~~~iviaCNTah~--~~~~l~~~~--~ipii~ii~~~~~~~~~ 112 (226)
T 2zsk_A 74 AELIAFAANTPHL--VFDDVQREV--NVPMVSIIDAVAEEILK 112 (226)
T ss_dssp CSEEEESSSGGGG--GHHHHHHHC--SSCBCCHHHHHHHHHHH
T ss_pred CCEEEEECCHHHH--HHHHHHHHC--CCCCCCCHHHHHHHHHH
T ss_conf 9999983608888--799999865--99943442489999986
No 23
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=88.58 E-value=0.47 Score=25.89 Aligned_cols=44 Identities=20% Similarity=0.234 Sum_probs=38.6
Q ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCC
Q ss_conf 63488707987791058999999996899989999415789898
Q gi|254780905|r 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG 53 (271)
Q Consensus 10 ~~~~~~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG 53 (271)
|+.+.-|.|.=+|.+|++.++.|++.-++.+++-+.+..+.||.
T Consensus 1 M~~~~~IVIIGgG~AGl~aA~~Lr~~~~~~~Itli~~e~~~~y~ 44 (431)
T 1q1r_A 1 MNANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHH 44 (431)
T ss_dssp -CCSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBC
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC
T ss_conf 98999999999869999999999804959968999487667777
No 24
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=86.04 E-value=0.52 Score=25.61 Aligned_cols=49 Identities=20% Similarity=0.503 Sum_probs=39.3
Q ss_pred CCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCC---------CCCCHHHH
Q ss_conf 48870798779105899999999689998999941578989---------89898999
Q gi|254780905|r 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPY---------GNWEDHAL 60 (271)
Q Consensus 12 ~~~~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PY---------G~ks~~~I 60 (271)
|.+.|.|.=+|.+|++..+.|++..|+.+++-+-++.+++| |..+.+++
T Consensus 1 M~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~~~~g~~~~~~i 58 (430)
T 3h28_A 1 MAKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDI 58 (430)
T ss_dssp -CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGS
T ss_pred CCCCEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCHHHH
T ss_conf 9997899898899999999996269678199992888776665678886288888996
No 25
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, FAD, flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=85.93 E-value=1 Score=23.63 Aligned_cols=41 Identities=22% Similarity=0.374 Sum_probs=36.1
Q ss_pred CCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCC
Q ss_conf 88707987791058999999996899989999415789898
Q gi|254780905|r 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG 53 (271)
Q Consensus 13 ~~~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG 53 (271)
|..|.|.-+|.+||+..++|++.-++.+++-+.+..+.||.
T Consensus 1 n~~VvIIGgG~AGl~aA~~L~~~~~~~~V~li~~~~~~~y~ 41 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQ 41 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBC
T ss_pred CCCEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
T ss_conf 99999989869999999999806956819999688876656
No 26
>2fds_A Orotidine-monophosphate-decarboxylase; TIM barrel, structural genomics, structural genomics consortium, SGC, unknown function; 1.72A {Plasmodium berghei} SCOP: c.1.2.3 PDB: 2aqw_A
Probab=85.51 E-value=1.3 Score=22.88 Aligned_cols=35 Identities=11% Similarity=-0.057 Sum_probs=25.3
Q ss_pred CCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECHHH
Q ss_conf 0588789980563588999999864899789828589
Q gi|254780905|r 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDS 225 (271)
Q Consensus 189 ~~~~D~iILGCTHyPll~~~i~~~~~~~v~iIDpa~~ 225 (271)
..+.+.+|.|+|+ |--...+++.+|+ ..++=|+-.
T Consensus 254 ~~g~~G~Vvgat~-p~el~~iR~~~p~-~~iLvPGIG 288 (352)
T 2fds_A 254 NNEFIGFVVGSNA-FEEMKIIRNKFPD-SYILSPGIG 288 (352)
T ss_dssp GTCCEEEEECTTC-HHHHHHHHHHSTT-CCEEECCC-
T ss_pred CCCCCCEEECCCC-HHHHHHHHHHCCC-CEEEECCCC
T ss_conf 3577764635798-8999999986899-839928857
No 27
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structure initiative; 2.30A {Desulfovibrio vulgaris DP4}
Probab=85.06 E-value=0.77 Score=24.49 Aligned_cols=43 Identities=19% Similarity=0.328 Sum_probs=34.7
Q ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCC
Q ss_conf 63488707987791058999999996899989999415789898
Q gi|254780905|r 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG 53 (271)
Q Consensus 10 ~~~~~~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG 53 (271)
|.|++ |.|.=+|-+||+..+.+++.-|+.+++-+-...+.||+
T Consensus 1 Msmkk-VvIIGgG~AGl~aA~~l~~~g~~~~Vtlie~~~~~~~~ 43 (472)
T 3iwa_A 1 MSLKH-VVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYG 43 (472)
T ss_dssp ---CE-EEEECCSSHHHHHHHHHHHHCTTSEEEEECCC------
T ss_pred CCCCC-EEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
T ss_conf 99798-99989889999999999717989819999389976577
No 28
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin-- NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocarbons catabolism; HET: FAD; 1.80A {Pseudomonas putida}
Probab=85.03 E-value=0.94 Score=23.91 Aligned_cols=42 Identities=24% Similarity=0.445 Sum_probs=37.0
Q ss_pred CCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCC
Q ss_conf 488707987791058999999996899989999415789898
Q gi|254780905|r 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG 53 (271)
Q Consensus 12 ~~~~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG 53 (271)
|...|.|.=+|.+||+..++|++.-|+.+++-+.+..+.||-
T Consensus 1 M~~~vVIIGgG~AGl~aA~~l~~~~~~~~Vtli~~e~~~~y~ 42 (410)
T 3ef6_A 1 MATHVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYD 42 (410)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBC
T ss_pred CCCCEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC
T ss_conf 999899989889999999999806968828999587876776
No 29
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=83.72 E-value=1.1 Score=23.54 Aligned_cols=49 Identities=20% Similarity=0.381 Sum_probs=39.7
Q ss_pred CCCCCC-CCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCC
Q ss_conf 433446-3488707987791058999999996899989999415789898
Q gi|254780905|r 5 NYPCEK-KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG 53 (271)
Q Consensus 5 ~~~~~~-~~~~~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG 53 (271)
+.|.++ +.+-+|.|.=+|.+||+..+.|++.-++.+++-+.+..+.||.
T Consensus 2 ~~~~~~~p~~~diVIIGgG~AGl~aA~~Lr~~~~~~~Itli~~e~~~~Y~ 51 (493)
T 1m6i_A 2 EVPQDKAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYM 51 (493)
T ss_dssp ------CCSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBC
T ss_pred CCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC
T ss_conf 99888889849999988869999999999961959968999698986545
No 30
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=81.03 E-value=1.6 Score=22.45 Aligned_cols=53 Identities=11% Similarity=0.150 Sum_probs=37.5
Q ss_pred HHHHHHHH--HHCCCCCEEEE--CCCCHHHHHHHHHHHCCCCC-EEEECHHHHHHHHH
Q ss_conf 99998465--41058878998--05635889999998648997-89828589999999
Q gi|254780905|r 179 EIEGCFIE--KEGKRTDVIVL--ACTHYPLIVHVFRQLSPWPV-DWLDNSDSIARRAR 231 (271)
Q Consensus 179 ~l~~~l~~--~~~~~~D~iIL--GCTHyPll~~~i~~~~~~~v-~iIDpa~~va~~~~ 231 (271)
.++..|.. +...++|.|+| |+|..|++++.+++.|+..+ .-+||-++||.=+.
T Consensus 288 ~i~~~l~~a~~~~~~I~~V~LvGGssriP~v~~~l~~~fg~~~~~~~npdeaVA~GAa 345 (509)
T 2v7y_A 288 PVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAA 345 (509)
T ss_dssp HHHHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHHSSCCBCCSCTTTHHHHHHH
T ss_pred HHHHHHHHCCCCHHHCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
T ss_conf 9999999839998999689998970476899999999858896779781018999999
No 31
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=79.71 E-value=2 Score=21.66 Aligned_cols=42 Identities=14% Similarity=0.222 Sum_probs=35.0
Q ss_pred CCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCC
Q ss_conf 488707987791058999999996899989999415789898
Q gi|254780905|r 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG 53 (271)
Q Consensus 12 ~~~~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG 53 (271)
|...|.|.=+|.+||+....+++..|+.++.-+-...+.+|.
T Consensus 1 M~mkVvIIGgG~AGl~aA~~l~~~~~~~~VtlIe~~~~~~~~ 42 (452)
T 3oc4_A 1 MSLKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYL 42 (452)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC
T ss_conf 989899999789999999999816978828999489877876
No 32
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=79.43 E-value=2.1 Score=21.52 Aligned_cols=47 Identities=17% Similarity=0.239 Sum_probs=35.3
Q ss_pred HHCCCCCEEEE--CCCCHHHHHHHHHHHCC-CCCE-EEECHHHHHHHHHHH
Q ss_conf 41058878998--05635889999998648-9978-982858999999999
Q gi|254780905|r 187 KEGKRTDVIVL--ACTHYPLIVHVFRQLSP-WPVD-WLDNSDSIARRARCL 233 (271)
Q Consensus 187 ~~~~~~D~iIL--GCTHyPll~~~i~~~~~-~~v~-iIDpa~~va~~~~~~ 233 (271)
+....+|.++| |+|..|++++.+++.|+ ..+. -+||-++||+=+.-.
T Consensus 326 ~~~~dId~V~LvGGssriP~V~~~l~~~f~~~~~~~~in~deaVa~GAA~~ 376 (554)
T 1yuw_A 326 LDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQ 376 (554)
T ss_dssp CCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHH
T ss_pred CCHHHCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 998889789998983743779999999819988888879506789989999
No 33
>1yqz_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.54A {Staphylococcus aureus}
Probab=78.64 E-value=3.3 Score=20.23 Aligned_cols=38 Identities=21% Similarity=0.350 Sum_probs=33.3
Q ss_pred EEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCC
Q ss_conf 07987791058999999996899989999415789898
Q gi|254780905|r 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG 53 (271)
Q Consensus 16 IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG 53 (271)
|.|.=+|.+|++....+++.-|+.+++-+-...+.||+
T Consensus 4 VvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~ 41 (438)
T 1yqz_A 4 IVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFA 41 (438)
T ss_dssp EEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBC
T ss_pred EEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC
T ss_conf 99989989999999999807989958999589986677
No 34
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=76.48 E-value=3.6 Score=20.06 Aligned_cols=39 Identities=21% Similarity=0.321 Sum_probs=34.4
Q ss_pred CEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCC
Q ss_conf 707987791058999999996899989999415789898
Q gi|254780905|r 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG 53 (271)
Q Consensus 15 ~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG 53 (271)
-|.|.-+|.+||+..+.+++.-|+.+++-+++..+.||.
T Consensus 11 DVvIIG~G~AGl~aA~~l~~~g~~~~I~li~~~~~~~y~ 49 (415)
T 3lxd_A 11 DVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYE 49 (415)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHC
T ss_conf 999999889999999999806988859999675871311
No 35
>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1
Probab=76.28 E-value=2.8 Score=20.71 Aligned_cols=99 Identities=20% Similarity=0.226 Sum_probs=41.9
Q ss_pred CCCHHHHHHHHHCCCCCEEEEECHHHHCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 45479999998407883299850677317016899851278857977056422578776642677697999999999846
Q gi|254780905|r 106 GAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185 (271)
Q Consensus 106 gii~~~~~a~~~~~~~~VgiLAT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~lv~~iE~~~~~~~~~~~~~~~~l~~~l~ 185 (271)
+|.++..........++||+---+.|.+...|-..+-..-.+-.|. .-.|.++ +...+...++.
T Consensus 83 ~m~~g~~~~~p~a~ig~i~~~R~~~t~~p~~yy~kLP~~i~~~~vi-llDPmlA------------TG~s~~~ai~~--- 146 (209)
T 1i5e_A 83 GMVDGILKLIPAAKVGHIGLYRDPQTLKPVEYYVKLPSDVEERDFI-IVDPMLA------------TGGSAVAAIDA--- 146 (209)
T ss_dssp GGHHHHHHHCTTSEECEEEEECCTTCSSCEEEEEECCTTTTTSEEE-EECSEES------------SSHHHHHHHHH---
T ss_pred HHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCEEE-EECHHHH------------CCHHHHHHHHH---
T ss_conf 4788999858676005346530468887387624358651038689-7586886------------47779999999---
Q ss_pred HHHCCCCCEEEECC-CCHHHHHHHHHHHCCCCCEEEEC
Q ss_conf 54105887899805-63588999999864899789828
Q gi|254780905|r 186 EKEGKRTDVIVLAC-THYPLIVHVFRQLSPWPVDWLDN 222 (271)
Q Consensus 186 ~~~~~~~D~iILGC-THyPll~~~i~~~~~~~v~iIDp 222 (271)
+.+.++..+++-| ===|-=.+.+.+.+| +++++=.
T Consensus 147 -L~~~G~~~I~~vs~ias~~Gl~~l~~~~P-~v~I~t~ 182 (209)
T 1i5e_A 147 -LKKRGAKSIKFMCLIAAPEGVKAVETAHP-DVDIYIA 182 (209)
T ss_dssp -HHHTTCCCEEEECSEECHHHHHHHHHHCT-TCEEEES
T ss_pred -HHHCCCCCEEEEEEECCHHHHHHHHHHCC-CCEEEEE
T ss_conf -99669985799998507999999998794-9789999
No 36
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, acetylation, ATP-binding, calmodulin-binding, chaperone, cytoplasm; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=75.67 E-value=3.9 Score=19.80 Aligned_cols=46 Identities=17% Similarity=0.320 Sum_probs=35.6
Q ss_pred HCCCCCEEEE--CCCCHHHHHHHHHHHCCCCCEE-EECHHHHHHHHHHH
Q ss_conf 1058878998--0563588999999864899789-82858999999999
Q gi|254780905|r 188 EGKRTDVIVL--ACTHYPLIVHVFRQLSPWPVDW-LDNSDSIARRARCL 233 (271)
Q Consensus 188 ~~~~~D~iIL--GCTHyPll~~~i~~~~~~~v~i-IDpa~~va~~~~~~ 233 (271)
....+|.++| |+|-.|++++.+++.||..+.- +||-++||+=+.-.
T Consensus 331 ~~~~i~~V~LvGGssriP~v~~~l~~~fg~~~~~~~n~deaVA~GAA~~ 379 (675)
T 3d2f_A 331 SAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFI 379 (675)
T ss_dssp CGGGCCEEEEESGGGGSHHHHHHHHHHHTSCEECCSCTTTHHHHHHHHH
T ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
T ss_conf 8654539999689365368999999996889887899736999999999
No 37
>2q5c_A NTRC family transcriptional regulator; structural genomics, PSI-2, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=74.70 E-value=4.3 Score=19.53 Aligned_cols=168 Identities=14% Similarity=0.102 Sum_probs=94.3
Q ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCH
Q ss_conf 63488707987791058999999996899989999415789898989899999999999998621698489971762026
Q gi|254780905|r 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFT 89 (271)
Q Consensus 10 ~~~~~~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACNTasa 89 (271)
|.|+..|+..=+.-+=...++++.+..--...++.||- +...++...+ + .++|.|+-.=.||
T Consensus 1 m~~~~kI~~iap~e~l~~l~~~~a~~~~~~~~~~~~~l--------------~~~~~iA~~l-~-~~~DVIISRGgTa-- 62 (196)
T 2q5c_A 1 MSLSLKIALISQNENLLNLFPKLALEKNFIPITKTASL--------------TRASKIAFGL-Q-DEVDAIISRGATS-- 62 (196)
T ss_dssp -CCCCEEEEEESCHHHHHHHHHHHHHHTCEEEEEECCH--------------HHHHHHHHHH-T-TTCSEEEEEHHHH--
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEEH--------------HHHHHHHHHH-H-CCCCEEEECCHHH--
T ss_conf 98751599987938899999999975487567886669--------------9999999975-4-3987999896589--
Q ss_pred HHHHHHHHHCCCCCCCCCC-------HHHHHHHHHCCCCCEEEEECHHHHCC-HHHHHHHHHCCCCCEEEECCCCCHHHH
Q ss_conf 3389998625777654454-------79999998407883299850677317-016899851278857977056422578
Q gi|254780905|r 90 LIKDELRSTFPSMAFLGAV-------PAIKQAAAYTQSGLISILSTPATLRR-TYTSNLIHSYVSQCHIHLVSSMILASR 161 (271)
Q Consensus 90 ~~~~~l~~~~~~ipiigii-------~~~~~a~~~~~~~~VgiLAT~~Ti~s-~~y~~~i~~~~~~~~v~~~~~~~lv~~ 161 (271)
+.+|+.+ ++|++.+. .+++.+... .++||+++=+..+.. ..+.+.+ +-++..+....
T Consensus 63 ---~~Ir~~~-~iPVVeI~vs~~Dil~al~~a~~~--~~kiavvgf~~~~~~~~~i~~ll---~~~i~~~~~~~------ 127 (196)
T 2q5c_A 63 ---DYIKKSV-SIPSISIKVTRFDTMRAVYNAKRF--GNELALIAYKHSIVDKHEIEAML---GVKIKEFLFSS------ 127 (196)
T ss_dssp ---HHHHTTC-SSCEEEECCCHHHHHHHHHHHGGG--CSEEEEEEESSCSSCHHHHHHHH---TCEEEEEEECS------
T ss_pred ---HHHHHHC-CCCEEEECCCHHHHHHHHHHHHHH--CCCEEEEECCCCCHHHHHHHHHH---CCCEEEEEECC------
T ss_conf ---9999828-997799807887999999999975--89789996785015899999985---99559999668------
Q ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECHHHHHHHH
Q ss_conf 776642677697999999999846541058878998056358899999986489978982858999999
Q gi|254780905|r 162 VEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230 (271)
Q Consensus 162 iE~~~~~~~~~~~~~~~~l~~~l~~~~~~~~D~iILGCTHyPll~~~i~~~~~~~v~iIDpa~~va~~~ 230 (271)
.+++...+ ..++.+|+|.+ .|.+. ...+.+.++-+--+|.+++.-.++.
T Consensus 128 -----------~~e~~~~i----~~l~~~G~~vv-VG~~~----~~~~A~~~Gl~~ili~Sg~eSI~~A 176 (196)
T 2q5c_A 128 -----------EDEITTLI----SKVKTENIKIV-VSGKT----VTDEAIKQGLYGETINSGEESLRRA 176 (196)
T ss_dssp -----------GGGHHHHH----HHHHHTTCCEE-EECHH----HHHHHHHTTCEEEECCCCHHHHHHH
T ss_pred -----------HHHHHHHH----HHHHHCCCCEE-ECCHH----HHHHHHHCCCCEEEEECCHHHHHHH
T ss_conf -----------89999999----99998699899-99879----9999998599789996549999999
No 38
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=73.99 E-value=2.3 Score=21.36 Aligned_cols=56 Identities=11% Similarity=0.104 Sum_probs=39.7
Q ss_pred HHHHHHHH--HHHCCCCCEEEE--CCCCHHHHHHHHHHHCCCCC-EEEECHHHHHHHHHHH
Q ss_conf 99999846--541058878998--05635889999998648997-8982858999999999
Q gi|254780905|r 178 KEIEGCFI--EKEGKRTDVIVL--ACTHYPLIVHVFRQLSPWPV-DWLDNSDSIARRARCL 233 (271)
Q Consensus 178 ~~l~~~l~--~~~~~~~D~iIL--GCTHyPll~~~i~~~~~~~v-~iIDpa~~va~~~~~~ 233 (271)
..++..|. .+...++|.++| |+|-.|++++.++++|+..+ +-++|-++||+=+.-.
T Consensus 318 ~~i~~~l~~~~~~~~~i~~V~LvGGssriP~Vq~~l~~~fg~~~~~~~n~deaVa~GAa~~ 378 (605)
T 2kho_A 318 EPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQ 378 (605)
T ss_dssp SHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHH
T ss_pred HHHHHHHHHCCCCHHHCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
T ss_conf 9999999984999899998999788656289999999985989677979624899879999
No 39
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=73.54 E-value=4 Score=19.74 Aligned_cols=38 Identities=5% Similarity=0.095 Sum_probs=32.5
Q ss_pred EEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCC
Q ss_conf 07987791058999999996899989999415789898
Q gi|254780905|r 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG 53 (271)
Q Consensus 16 IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG 53 (271)
|.|.=+|.+||+..+++++..|+.++.-+-...+.+|.
T Consensus 3 VvIIGaG~AGl~aA~~l~~~~~~~~Vtlie~~~~~~~~ 40 (452)
T 2cdu_A 3 VIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFL 40 (452)
T ss_dssp EEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBC
T ss_pred EEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC
T ss_conf 99999789999999999834969819999179976777
No 40
>1xtt_A Probable uracil phosphoribosyltransferase; tetramer, type 1 phosphoribosyltransferase, UMP complex; HET: U5P; 1.80A {Sulfolobus solfataricus} SCOP: c.61.1.1 PDB: 1vst_A* 1xtu_A* 1xtv_A* 3g6w_A*
Probab=72.63 E-value=4 Score=19.73 Aligned_cols=16 Identities=13% Similarity=-0.023 Sum_probs=7.6
Q ss_pred HHHHHHHHCCCCCEEEE
Q ss_conf 99999986489978982
Q gi|254780905|r 205 IVHVFRQLSPWPVDWLD 221 (271)
Q Consensus 205 l~~~i~~~~~~~v~iID 221 (271)
=.+.+.+.+| +++++=
T Consensus 175 Gi~~l~~~~P-~v~I~t 190 (216)
T 1xtt_A 175 GVNKILSKYP-FIYLFT 190 (216)
T ss_dssp HHHHHHHHCT-TSEEEE
T ss_pred HHHHHHHHCC-CCEEEE
T ss_conf 9999998795-978999
No 41
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics, protein structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=72.38 E-value=4.2 Score=19.56 Aligned_cols=42 Identities=17% Similarity=0.316 Sum_probs=32.2
Q ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCC
Q ss_conf 6348870798779105899999999689998999941578989
Q gi|254780905|r 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPY 52 (271)
Q Consensus 10 ~~~~~~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PY 52 (271)
|.|++ |.|.=+|-+||+....+++.-|+.+++-+-...+.+|
T Consensus 1 MsMKk-VvIIGgG~AGl~aA~~l~~~~~~~~V~lie~~~~~~~ 42 (449)
T 3kd9_A 1 MSLKK-VVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSH 42 (449)
T ss_dssp -CCCE-EEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC-
T ss_pred CCCCE-EEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
T ss_conf 99874-9998988999999999971697982899958876788
No 42
>3kpk_A Sulfide-quinone reductase, putative; oxidoreductases, sulfide:quinone oxidoreductase, C160A mutan oxidoreductase; HET: FAD LMT; 2.05A {Acidithiobacillus ferrooxidans atcc 23} PDB: 3kpg_A* 3kpi_A*
Probab=70.88 E-value=4.2 Score=19.58 Aligned_cols=47 Identities=17% Similarity=0.328 Sum_probs=35.4
Q ss_pred CEEEEECCCCHHHHHHHHHHHCC-CCCEEEEECCCCCCC---------CCCCHHHHH
Q ss_conf 70798779105899999999689-998999941578989---------898989999
Q gi|254780905|r 15 SILIFDSGIGGLIVLQKMRFLMP-EYHFIYVADDVGFPY---------GNWEDHALK 61 (271)
Q Consensus 15 ~IgifDSGiGGLtv~~~l~~~lP-~~~~iY~~D~~~~PY---------G~ks~~~I~ 61 (271)
.|.|.=+|.+||+..++|++.++ +.+++-+-++.+++| |..+.+++.
T Consensus 3 kVvIIG~G~AGl~aA~~L~~~~~~~~~VtlId~~~~~~~~p~~~~v~~g~~~~~~i~ 59 (434)
T 3kpk_A 3 HVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIA 59 (434)
T ss_dssp EEEEECCSTTHHHHHHHHHHHHCTTSEEEEECSSSEEECGGGHHHHHHTSSCHHHHE
T ss_pred CEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCHHHHH
T ss_conf 689988899999999999854799782999958887677676788841778899975
No 43
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=69.94 E-value=5.5 Score=18.81 Aligned_cols=42 Identities=14% Similarity=0.182 Sum_probs=28.3
Q ss_pred CCCCEEEE--CCCCHHHHHHHHHHHCCCCC-EEEECHHHHHHHHH
Q ss_conf 58878998--05635889999998648997-89828589999999
Q gi|254780905|r 190 KRTDVIVL--ACTHYPLIVHVFRQLSPWPV-DWLDNSDSIARRAR 231 (271)
Q Consensus 190 ~~~D~iIL--GCTHyPll~~~i~~~~~~~v-~iIDpa~~va~~~~ 231 (271)
..+|.++| |.+..|++++.+++.++..+ .-+||-++||+=+.
T Consensus 332 ~~I~~V~lvGG~s~~p~v~~~i~~~f~~~~~~~~~p~~aVa~GAa 376 (383)
T 1dkg_D 332 SDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAA 376 (383)
T ss_dssp TTCCEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHH
T ss_pred HHCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
T ss_conf 899999998951045899999999868897668880526999999
No 44
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=69.61 E-value=1.5 Score=22.63 Aligned_cols=47 Identities=15% Similarity=0.113 Sum_probs=37.2
Q ss_pred EEEE--CCCCHHHHHHHHHHHCCCCCEE-EECHHHHHHHHHHHHHHCCCC
Q ss_conf 8998--0563588999999864899789-828589999999998642733
Q gi|254780905|r 194 VIVL--ACTHYPLIVHVFRQLSPWPVDW-LDNSDSIARRARCLLPRINTH 240 (271)
Q Consensus 194 ~iIL--GCTHyPll~~~i~~~~~~~v~i-IDpa~~va~~~~~~L~~~~~~ 240 (271)
.+|| |.|..|.+++.+++.|+.++.. +||-++||+=+..++++.+.+
T Consensus 280 ~ViLvGGsSriP~v~~~i~~~fg~~v~~~~np~~aVA~GAAl~~~~~~~~ 329 (344)
T 1jce_A 280 GIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLDKVNIL 329 (344)
T ss_dssp CEEEESGGGCSBTHHHHHHHHHSSCEEECSSTTTHHHHHHHHGGGCHHHH
T ss_pred CEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCHHHH
T ss_conf 39998943333689999999978697868887879999999997386789
No 45
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=68.86 E-value=5.7 Score=18.67 Aligned_cols=38 Identities=13% Similarity=0.284 Sum_probs=32.4
Q ss_pred EEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCC
Q ss_conf 07987791058999999996899989999415789898
Q gi|254780905|r 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG 53 (271)
Q Consensus 16 IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG 53 (271)
|.|.=+|.+||+..+.+++.-|+.+++-+-...+.+|.
T Consensus 3 VvIIGgG~aGl~aA~~l~~~~~~~~V~lie~~~~~~~~ 40 (447)
T 1nhp_A 3 VIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFL 40 (447)
T ss_dssp EEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBC
T ss_pred EEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC
T ss_conf 99999889999999999807968829999089866877
No 46
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=68.63 E-value=5.8 Score=18.64 Aligned_cols=133 Identities=9% Similarity=0.059 Sum_probs=74.7
Q ss_pred HHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCC----H---HHHHHHHHCCCCCEEEEECHHHHCC-H
Q ss_conf 999999986216984899717620263389998625777654454----7---9999998407883299850677317-0
Q gi|254780905|r 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----P---AIKQAAAYTQSGLISILSTPATLRR-T 135 (271)
Q Consensus 64 ~~~~~~~ll~k~~~~~IVIACNTasa~~~~~l~~~~~~ipiigii----~---~~~~a~~~~~~~~VgiLAT~~Ti~s-~ 135 (271)
..+.+...++.+++|.|+-.=.|| ..+|+.+ ++|++.|- + +++.+-. ..++||+++=+.++.. .
T Consensus 51 av~~~~~~~~~~~~DviISRG~ta-----~~Ir~~~-~iPVVeI~vs~~Dil~aL~~a~~--~~~kIavVgf~~~~~~~~ 122 (225)
T 2pju_A 51 AVTYIRKKLANERCDAIIAAGSNG-----AYLKSRL-SVPVILIKPSGYDVLQFLAKAGK--LTSSIGVVTYQETIPALV 122 (225)
T ss_dssp HHHHHHHHTTTSCCSEEEEEHHHH-----HHHHTTC-SSCEEEECCCHHHHHHHHHHTTC--TTSCEEEEEESSCCHHHH
T ss_pred HHHHHHHHHHCCCCCEEEECCHHH-----HHHHHHC-CCCEEEEECCHHHHHHHHHHHHH--HCCCEEEEECCCCCHHHH
T ss_conf 999999998649986999685689-----9999858-99889970787689999999997--589889993764036999
Q ss_pred HHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCC
Q ss_conf 16899851278857977056422578776642677697999999999846541058878998056358899999986489
Q gi|254780905|r 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW 215 (271)
Q Consensus 136 ~y~~~i~~~~~~~~v~~~~~~~lv~~iE~~~~~~~~~~~~~~~~l~~~l~~~~~~~~D~iILGCTHyPll~~~i~~~~~~ 215 (271)
.+.+.+ +-++..+.... .++++.. +..++..|+|.+ .|.+. . -.+.+.+|=
T Consensus 123 ~~~~ll---~~~i~~~~~~~-----------------~~e~~~~----v~~l~~~G~~vV-VG~~~---~-~~~A~~~Gl 173 (225)
T 2pju_A 123 AFQKTF---NLRLDQRSYIT-----------------EEDARGQ----INELKANGTEAV-VGAGL---I-TDLAEEAGM 173 (225)
T ss_dssp HHHHHH---TCCEEEEEESS-----------------HHHHHHH----HHHHHHTTCCEE-EESHH---H-HHHHHHTTS
T ss_pred HHHHHH---CCCEEEEEECC-----------------HHHHHHH----HHHHHHCCCCEE-ECCHH---H-HHHHHHCCC
T ss_conf 999996---99449999668-----------------8999999----999998699799-98858---9-999998499
Q ss_pred CCEEEECHHHHHHHHHHH
Q ss_conf 978982858999999999
Q gi|254780905|r 216 PVDWLDNSDSIARRARCL 233 (271)
Q Consensus 216 ~v~iIDpa~~va~~~~~~ 233 (271)
+--+|-|++++-+.+..-
T Consensus 174 ~~vli~SgeSI~~Ai~~A 191 (225)
T 2pju_A 174 TGIFIYSAATVRQAFSDA 191 (225)
T ss_dssp EEEESSCHHHHHHHHHHH
T ss_pred CEEEECCHHHHHHHHHHH
T ss_conf 789975889999999999
No 47
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, FAD, NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=67.81 E-value=4.3 Score=19.52 Aligned_cols=40 Identities=23% Similarity=0.431 Sum_probs=33.6
Q ss_pred CCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCC
Q ss_conf 8870798779105899999999689998999941578989
Q gi|254780905|r 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPY 52 (271)
Q Consensus 13 ~~~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PY 52 (271)
+..|.|.=+|.+||+..+++++.-|+.+++-+.+..+.||
T Consensus 4 ~~dvvIIGgG~AGl~aA~~l~~~~~~~~V~li~~~~~~~y 43 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSY 43 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCEE
T ss_pred CCCEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
T ss_conf 7999998887999999999980697983999969888767
No 48
>1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20
Probab=64.72 E-value=5.9 Score=18.61 Aligned_cols=80 Identities=14% Similarity=0.191 Sum_probs=54.2
Q ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHCCC--------CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf 463488707987791058999999996899--------989999415789898989899999999999998621698489
Q gi|254780905|r 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPE--------YHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80 (271)
Q Consensus 9 ~~~~~~~IgifDSGiGGLtv~~~l~~~lP~--------~~~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~I 80 (271)
-+..++++-|=++|+|=-++++.+.+++.. -.-+|.=|..++=-|.+...+..++...+++.+.+. ..+.|
T Consensus 40 r~~k~n~lLVG~pGVGKTalv~~LA~ri~~~~vp~~L~~~~i~~ld~~~LiAG~~~rg~~eerl~~il~e~~~~-~~~iI 118 (195)
T 1jbk_A 40 RRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQ-EGNVI 118 (195)
T ss_dssp SSSSCEEEEECCTTSCHHHHHHHHHHHHHHTCSCGGGTTCEEEEECHHHHHTTTCSHHHHHHHHHHHHHHHHHS-TTTEE
T ss_pred CCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCHHHCCCEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHCC-CCCEE
T ss_conf 66889916852787674899999999998079997885986899659998736884056799999999998516-99789
Q ss_pred EEECCCCCHH
Q ss_conf 9717620263
Q gi|254780905|r 81 VIACNTAFTL 90 (271)
Q Consensus 81 VIACNTasa~ 90 (271)
+-.--.|.+
T Consensus 119 -LfIDeih~l 127 (195)
T 1jbk_A 119 -LFIDELHTM 127 (195)
T ss_dssp -EEEETGGGG
T ss_pred -EEECCHHHH
T ss_conf -995658886
No 49
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, PSI-2, protein structure initiative; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=64.19 E-value=6.3 Score=18.38 Aligned_cols=33 Identities=9% Similarity=0.160 Sum_probs=12.7
Q ss_pred CCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECH
Q ss_conf 5887899805635889999998648997898285
Q gi|254780905|r 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNS 223 (271)
Q Consensus 190 ~~~D~iILGCTHyPll~~~i~~~~~~~v~iIDpa 223 (271)
.+.|.++ -||=|.+-.+..+..+..++..+|-+
T Consensus 68 ~~~DvVi-~~~p~~~~~~ia~aa~~~g~~~~Dl~ 100 (118)
T 3ic5_A 68 GGFDAVI-SAAPFFLTPIIAKAAKAAGAHYFDLT 100 (118)
T ss_dssp TTCSEEE-ECSCGGGHHHHHHHHHHTTCEEECCC
T ss_pred CCCCEEE-ECCCCCCCHHHHHHHHHHCCCEEECC
T ss_conf 5998999-83783045999999999099979888
No 50
>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomics, JCSG, PSI, protein structure initiative; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1
Probab=63.44 E-value=7.3 Score=17.99 Aligned_cols=98 Identities=17% Similarity=0.098 Sum_probs=39.9
Q ss_pred CCHHHHHHHHHCCCCCEEEEECHHHHCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf 54799999984078832998506773170168998512788579770564225787766426776979999999998465
Q gi|254780905|r 107 AVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186 (271)
Q Consensus 107 ii~~~~~a~~~~~~~~VgiLAT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~lv~~iE~~~~~~~~~~~~~~~~l~~~l~~ 186 (271)
|..++.........++||+---+.|.+...|-..+-....+..|. +-.|.++ +...+...++.
T Consensus 96 m~~g~~~~~P~a~~g~i~i~r~~~t~~~~~yy~klP~~~~~~~Vi-llDPmlA------------TG~s~~~ai~~---- 158 (221)
T 1o5o_A 96 MADGILELLPNASVGHIGIYRDPETLQAVEYYAKLPPLNDDKEVF-LLDPMLA------------TGVSSIKAIEI---- 158 (221)
T ss_dssp HHHHHHHHSTTCEECEEEEEECTTTCCEEEEEEECCCCCTTCEEE-EECSEES------------SSHHHHHHHHH----
T ss_pred HHHHHHHHCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCEEE-EEHHHHH------------CCHHHHHHHHH----
T ss_conf 778999977876413788873588888187501078663467289-8778864------------77129999999----
Q ss_pred HHCCCCCEEEECC-CCHHHHHHHHHHHCCCCCEEEEC
Q ss_conf 4105887899805-63588999999864899789828
Q gi|254780905|r 187 KEGKRTDVIVLAC-THYPLIVHVFRQLSPWPVDWLDN 222 (271)
Q Consensus 187 ~~~~~~D~iILGC-THyPll~~~i~~~~~~~v~iIDp 222 (271)
+++.++..|++-| ==-|-=.+.+.+.+| +++++=.
T Consensus 159 L~~~G~~~I~~v~~ias~~Gi~~i~~~~P-~v~I~ta 194 (221)
T 1o5o_A 159 LKENGAKKITLVALIAAPEGVEAVEKKYE-DVKIYVA 194 (221)
T ss_dssp HHHTTCCEEEEECSEECHHHHHHHHHHCT-TCEEEES
T ss_pred HHHCCCCEEEEEEEEECHHHHHHHHHHCC-CCEEEEE
T ss_conf 98659970899998855899999998787-9889999
No 51
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodanese, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=63.13 E-value=7.4 Score=17.95 Aligned_cols=41 Identities=22% Similarity=0.307 Sum_probs=34.8
Q ss_pred CCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCC
Q ss_conf 88707987791058999999996899989999415789898
Q gi|254780905|r 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG 53 (271)
Q Consensus 13 ~~~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG 53 (271)
.+.|.|.=+|-+|++....+++.-|+.+++-+-...+.+|+
T Consensus 36 sKKVVIIGgG~AGlsaA~~lrr~g~~~~Vtliek~~~~~~~ 76 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFA 76 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBC
T ss_pred CCEEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
T ss_conf 98899989889999999999727998819999489877788
No 52
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A*
Probab=61.18 E-value=8 Score=17.72 Aligned_cols=21 Identities=14% Similarity=0.066 Sum_probs=15.8
Q ss_pred CEEEEECCCCHHHHHHHHHHH
Q ss_conf 707987791058999999996
Q gi|254780905|r 15 SILIFDSGIGGLIVLQKMRFL 35 (271)
Q Consensus 15 ~IgifDSGiGGLtv~~~l~~~ 35 (271)
.||+.=-|.=|.-+.+.|.+.
T Consensus 5 kIg~IGlG~MG~~mA~~L~~~ 25 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLKA 25 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHHT
T ss_pred EEEEEEEHHHHHHHHHHHHHC
T ss_conf 899982548899999999978
No 53
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1
Probab=60.89 E-value=8.1 Score=17.69 Aligned_cols=36 Identities=11% Similarity=0.077 Sum_probs=29.9
Q ss_pred CCCCCCCCCC-----CHHHHHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 1578989898-----989999999999999862169848997
Q gi|254780905|r 46 DDVGFPYGNW-----EDHALKKRLMFLFSDILDKYQPVLSVI 82 (271)
Q Consensus 46 D~~~~PYG~k-----s~~~I~~~~~~~~~~ll~k~~~~~IVI 82 (271)
+++++++|+| |++|...|..++-+. +++.++|++|+
T Consensus 4 ~~~~~~~~~~~~~~fs~~E~~~R~~rl~~~-m~~~~lDalvi 44 (401)
T 1chm_A 4 KTLRIRNGDKVRSTFSAQEYANRQARLRAH-LAAENIDAAIF 44 (401)
T ss_dssp SEECCCCSCCCCCSSCHHHHHHHHHHHHHH-HHHTTCSEEEE
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-HHHCCCCEEEE
T ss_conf 656678877078997999999999999999-99879989998
No 54
>2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum}
Probab=59.29 E-value=5.6 Score=18.74 Aligned_cols=60 Identities=17% Similarity=0.260 Sum_probs=25.4
Q ss_pred CCCCCEEEEECCCCHHHHHHHHHHHCC---------CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 348870798779105899999999689---------9989999415789898989899999999999998
Q gi|254780905|r 11 KLQNSILIFDSGIGGLIVLQKMRFLMP---------EYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71 (271)
Q Consensus 11 ~~~~~IgifDSGiGGLtv~~~l~~~lP---------~~~~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~l 71 (271)
..++++-|=++|+|=-++++.+.+++. +.+ +|--|..++=.|.+...+..++...+++.+
T Consensus 42 ~k~n~lLVGepGVGKTaiV~~la~ri~~~~vp~~L~~~~-i~~ld~~~LvAG~~~~G~~e~rl~~l~~e~ 110 (187)
T 2p65_A 42 TKNNPILLGDPGVGKTAIVEGLAIKIVQGDVPDSLKGRK-LVSLDLSSLIAGAKYRGDFEERLKSILKEV 110 (187)
T ss_dssp SSCEEEEESCGGGCHHHHHHHHHHHHHTTCSCTTTTTCE-EEEECHHHHHHHCCSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCE-EEEEEHHHHHCCCCCHHHHHHHHHHHHHHH
T ss_conf 789966855887367999999999998089998886987-999608898748983657999999999999
No 55
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=58.80 E-value=8.7 Score=17.46 Aligned_cols=67 Identities=12% Similarity=0.078 Sum_probs=35.6
Q ss_pred CEEEEE-CCCCHHHHHHHHHHHCCCCCEEEEECCCC--------CC----CCCCCHHHHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 707987-79105899999999689998999941578--------98----989898999999999999986216984899
Q gi|254780905|r 15 SILIFD-SGIGGLIVLQKMRFLMPEYHFIYVADDVG--------FP----YGNWEDHALKKRLMFLFSDILDKYQPVLSV 81 (271)
Q Consensus 15 ~IgifD-SGiGGLtv~~~l~~~lP~~~~iY~~D~~~--------~P----YG~ks~~~I~~~~~~~~~~ll~k~~~~~IV 81 (271)
.|||.= +|..|-.-++.++ .++++ .+..-|... .+ |++ ...+.. ..+.. ......+|+|+
T Consensus 5 r~~iIG~~G~i~~~h~~al~-~~~~~-~v~~~d~~~~~~~~~~~~~~a~~~~~--~~~~~~-~~~~~--~~~~~~iD~V~ 77 (312)
T 3o9z_A 5 RFALTGLAGYIAPRHLKAIK-EVGGV-LVASLDPATNVGLVDSFFPEAEFFTE--PEAFEA-YLEDL--RDRGEGVDYLS 77 (312)
T ss_dssp EEEEECTTSSSHHHHHHHHH-HTTCE-EEEEECSSCCCGGGGGTCTTCEEESC--HHHHHH-HHHHH--HHTTCCCSEEE
T ss_pred EEEEECCCCHHHHHHHHHHH-HCCCC-EEEEECCHHHHHHHHHCHHHHHHHCC--CCCCCH-HHHHH--HHCCCCCEEEE
T ss_conf 99999889899999999997-08995-89998670356675515888987144--235141-88987--50279965999
Q ss_pred EECCCCC
Q ss_conf 7176202
Q gi|254780905|r 82 IACNTAF 88 (271)
Q Consensus 82 IACNTas 88 (271)
|+..+.+
T Consensus 78 I~tp~~~ 84 (312)
T 3o9z_A 78 IASPNHL 84 (312)
T ss_dssp ECSCGGG
T ss_pred ECCCCHH
T ss_conf 9899578
No 56
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=58.80 E-value=1.4 Score=22.66 Aligned_cols=34 Identities=21% Similarity=0.216 Sum_probs=25.8
Q ss_pred HHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECHHH
Q ss_conf 5410588789980563588999999864899789828589
Q gi|254780905|r 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDS 225 (271)
Q Consensus 186 ~~~~~~~D~iILGCTHyPll~~~i~~~~~~~v~iIDpa~~ 225 (271)
.....++|.+|.|.||.|++.. . .++.+|+|+..
T Consensus 123 ~~~~~~~divi~GHTH~~~~~~-----~-~~~~iiNPGS~ 156 (178)
T 2kkn_A 123 KVFNEKPQVILFGHTHEPEDTV-----K-AGVRFLNPGSL 156 (178)
T ss_dssp HHSSSCCSEEECCSCSSCCEEE-----E-TTEEEECCCCT
T ss_pred HHHHCCCCEEEECCCCCCEEEE-----E-CCEEEEECCCC
T ss_conf 7521389889968856521899-----8-99999979899
No 57
>1fcd_A Flavocytochrome C sulfide dehydrogenase (flavin- binding subunit); electron transport(flavocytochrome); HET: FAD HEM; 2.53A {Allochromatium vinosum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=58.31 E-value=8 Score=17.70 Aligned_cols=35 Identities=11% Similarity=0.376 Sum_probs=28.9
Q ss_pred CCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCC
Q ss_conf 87079877910589999999968999899994157
Q gi|254780905|r 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDV 48 (271)
Q Consensus 14 ~~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~ 48 (271)
+.|.|.=.|.+||+.+++|++..|+.++.-+-...
T Consensus 3 KkVVIvGgG~AGl~aA~~L~~~~~~~~VtlId~~~ 37 (401)
T 1fcd_A 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT 37 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CEEEEECCHHHHHHHHHHHHCCCCCCCEEEEECCC
T ss_conf 81999997199999999997029489689993898
No 58
>3h1q_A Ethanolamine utilization protein EUTJ; structural genomics, PSI-2, protein structure initiative; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-2901}
Probab=53.69 E-value=10 Score=16.93 Aligned_cols=39 Identities=8% Similarity=-0.078 Sum_probs=31.3
Q ss_pred CCCEEEE--CCCCHHHHHHHHHHHCCCCCEE-EECHHHHHHH
Q ss_conf 8878998--0563588999999864899789-8285899999
Q gi|254780905|r 191 RTDVIVL--ACTHYPLIVHVFRQLSPWPVDW-LDNSDSIARR 229 (271)
Q Consensus 191 ~~D~iIL--GCTHyPll~~~i~~~~~~~v~i-IDpa~~va~~ 229 (271)
..+.++| |++..|.+.+.+++.++.++.. .||-+.+|.=
T Consensus 226 ~~~~VvL~GG~s~ipgi~~~l~~~~g~~v~~~~nP~~avA~G 267 (272)
T 3h1q_A 226 QTLPVYVVGGTAYLTGFSEEFSRFLGKEVQVPIHPLLVTPLG 267 (272)
T ss_dssp SSCCEEEESGGGGSTTHHHHHHHHHSSCCBCCSSGGGHHHHH
T ss_pred CCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEHHC
T ss_conf 998699989816312199999999789974469941221013
No 59
>1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A {Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A* 1m7h_A* 3cr7_A*
Probab=53.46 E-value=11 Score=16.89 Aligned_cols=86 Identities=10% Similarity=0.195 Sum_probs=48.9
Q ss_pred CCCCCEEEEECCCC---HHHHHHHHHHHCCC----CCEEEEECCCCC------CCCCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 34887079877910---58999999996899----989999415789------898989899999999999998621698
Q gi|254780905|r 11 KLQNSILIFDSGIG---GLIVLQKMRFLMPE----YHFIYVADDVGF------PYGNWEDHALKKRLMFLFSDILDKYQP 77 (271)
Q Consensus 11 ~~~~~IgifDSGiG---GLtv~~~l~~~lP~----~~~iY~~D~~~~------PYG~ks~~~I~~~~~~~~~~ll~k~~~ 77 (271)
.-+++.-|+=+|+= ==|+.++|.+++.. --+++-||.-|. .|...+..+...+..+++.++.+ ++
T Consensus 21 ~~~kg~vIwltGlsGSGKTTiA~~L~~~L~~~~~~~~~~ldgD~iR~~l~~~~~ys~~~r~~~~~r~~~~a~~~~~-~g- 98 (211)
T 1m7g_A 21 RNQRGLTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNIRFGLNKDLGFSEADRNENIRRIAEVAKLFAD-SN- 98 (211)
T ss_dssp HTSSCEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCEEEECHHHHTTTTTTTCCSSHHHHHHHHHHHHHHHHHHHH-TT-
T ss_pred HCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC-CC-
T ss_conf 5899879999899999889999999999998639978998638898862667899878999999999999998613-89-
Q ss_pred CEEEEECCCCCHHHHHHHHHH
Q ss_conf 489971762026338999862
Q gi|254780905|r 78 VLSVIACNTAFTLIKDELRST 98 (271)
Q Consensus 78 ~~IVIACNTasa~~~~~l~~~ 98 (271)
..++++|.+.....-+..|+.
T Consensus 99 ~~vIv~~~~~~~~~R~~~r~~ 119 (211)
T 1m7g_A 99 SIAITSFISPYRKDRDTARQL 119 (211)
T ss_dssp CEEEEECCCCCHHHHHHHHHH
T ss_pred CEEEEEECCCCHHHHHHHHHH
T ss_conf 757884135338999999998
No 60
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium LT2}
Probab=52.56 E-value=11 Score=16.79 Aligned_cols=73 Identities=16% Similarity=0.191 Sum_probs=46.3
Q ss_pred CCCCCCEEEEECCCCHH--HHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHH-HHHH-----HHHHHHHHCCCCCEEE
Q ss_conf 63488707987791058--99999999689998999941578989898989999-9999-----9999986216984899
Q gi|254780905|r 10 KKLQNSILIFDSGIGGL--IVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK-KRLM-----FLFSDILDKYQPVLSV 81 (271)
Q Consensus 10 ~~~~~~IgifDSGiGGL--tv~~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~I~-~~~~-----~~~~~ll~k~~~~~IV 81 (271)
+.|+-.|||. |.|.. .-++.+.+..|..+++.+.|.-. ++ .+++. ++-. .-.+.+++...+|+|+
T Consensus 20 ~~m~lrigII--G~G~ig~~h~~~~~~~~~~~~lvav~d~~~----~~-a~~~a~~~~~~~~~y~~~~ell~~~~iDaV~ 92 (357)
T 3ec7_A 20 QGMTLKAGIV--GIGMIGSDHLRRLANTVSGVEVVAVCDIVA----GR-AQAALDKYAIEAKDYNDYHDLINDKDVEVVI 92 (357)
T ss_dssp --CCEEEEEE--CCSHHHHHHHHHHHHTCTTEEEEEEECSST----TH-HHHHHHHHTCCCEEESSHHHHHHCTTCCEEE
T ss_pred CCCCEEEEEE--CCHHHHHHHHHHHHHCCCCCEEEEEECCCH----HH-HHHHHHHHCCCCCCCCCHHHHHCCCCCCEEE
T ss_conf 7993149999--984999999999984699978999978999----99-9999998399983119999996599988899
Q ss_pred EECCCCCH
Q ss_conf 71762026
Q gi|254780905|r 82 IACNTAFT 89 (271)
Q Consensus 82 IACNTasa 89 (271)
|++.+.+.
T Consensus 93 I~Tp~~~H 100 (357)
T 3ec7_A 93 ITASNEAH 100 (357)
T ss_dssp ECSCGGGH
T ss_pred ECCCCCCC
T ss_conf 88985000
No 61
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=49.07 E-value=12 Score=16.44 Aligned_cols=84 Identities=15% Similarity=0.182 Sum_probs=41.9
Q ss_pred CCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCC---CCC-------CCHHHHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 87079877910589999999968999899994157898---989-------89899999999999998621698489971
Q gi|254780905|r 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFP---YGN-------WEDHALKKRLMFLFSDILDKYQPVLSVIA 83 (271)
Q Consensus 14 ~~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~P---YG~-------ks~~~I~~~~~~~~~~ll~k~~~~~IVIA 83 (271)
..|+|.=||.=|.=...+.+ .| ..+.+.+..+.+.| +.+ .+.+.|. .+.++.+++.|+..
T Consensus 12 ~kvlIiG~Gqlgr~~a~Aak-~l-G~~v~~~~~~~~~p~~~~ad~~~~~~~~D~e~l~--------~~a~~~~~d~v~~~ 81 (391)
T 1kjq_A 12 TRVMLLGSGELGKEVAIECQ-RL-GVEVIAVDRYADAPAMHVAHRSHVINMLDGDALR--------RVVELEKPHYIVPE 81 (391)
T ss_dssp CEEEEESCSHHHHHHHHHHH-TT-TCEEEEEESSTTCGGGGGSSEEEECCTTCHHHHH--------HHHHHHCCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHH-HC-CCEEEEEECCCCCCHHHHCCEEEEECCCCHHHHH--------HHHHHHCCCEEEEC
T ss_conf 89999897899999999999-87-9989999799998367626636983688999999--------99998499999927
Q ss_pred CCCCCHHHHHHHHHHCCCCCCCCCCH
Q ss_conf 76202633899986257776544547
Q gi|254780905|r 84 CNTAFTLIKDELRSTFPSMAFLGAVP 109 (271)
Q Consensus 84 CNTasa~~~~~l~~~~~~ipiigii~ 109 (271)
+-...+-.+..+.+. .+++++--+
T Consensus 82 ~e~~~~~~~~~~~~~--g~~~~~p~~ 105 (391)
T 1kjq_A 82 IEAIATDMLIQLEEE--GLNVVPCAR 105 (391)
T ss_dssp SSCSCHHHHHHHHHT--TCEESSCHH
T ss_pred CCCHHHHHHHHHHHC--CCCCCCCCH
T ss_conf 774568999999965--971079819
No 62
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural genomics center for infectious disease; 2.20A {Anaplasma phagocytophilum HZ}
Probab=48.40 E-value=2.6 Score=20.95 Aligned_cols=29 Identities=21% Similarity=0.209 Sum_probs=21.1
Q ss_pred CCCCCCCCCEEEEECCCCHHHHHHHHHHHCC
Q ss_conf 3446348870798779105899999999689
Q gi|254780905|r 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMP 37 (271)
Q Consensus 7 ~~~~~~~~~IgifDSGiGGLtv~~~l~~~lP 37 (271)
|.+|.-+..|+||=||-| |-+++|.+..-
T Consensus 2 p~~m~k~mkIavl~SG~G--snl~aii~~~~ 30 (215)
T 3kcq_A 2 PGSMKKELRVGVLISGRG--SNLEALAKAFS 30 (215)
T ss_dssp -----CCEEEEEEESSCC--HHHHHHHHHTC
T ss_pred CCCCCCCCEEEEEEECCC--HHHHHHHHHHH
T ss_conf 988899878999993987--73999999977
No 63
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=47.56 E-value=13 Score=16.29 Aligned_cols=36 Identities=17% Similarity=0.295 Sum_probs=25.1
Q ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECC
Q ss_conf 63488707987791058999999996899989999415
Q gi|254780905|r 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADD 47 (271)
Q Consensus 10 ~~~~~~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~ 47 (271)
..|.+.|.|+=+|.=|-.+++.|.+. ++.+ +.++|.
T Consensus 20 ~~m~kkIlvlGaG~vg~~~a~~L~~~-~~~~-v~va~r 55 (467)
T 2axq_A 20 RHMGKNVLLLGSGFVAQPVIDTLAAN-DDIN-VTVACR 55 (467)
T ss_dssp ---CEEEEEECCSTTHHHHHHHHHTS-TTEE-EEEEES
T ss_pred HHCCCCEEEECCCHHHHHHHHHHHHC-CCCE-EEEEEC
T ss_conf 54488289999878999999999708-9934-999969
No 64
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling, bifunctional enzyme; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=45.56 E-value=14 Score=16.09 Aligned_cols=119 Identities=9% Similarity=-0.002 Sum_probs=59.0
Q ss_pred CEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHH----HHHHHHHHH---HCCCCCEEEEECCCC
Q ss_conf 7079877910589999999968999899994157898989898999999----999999986---216984899717620
Q gi|254780905|r 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR----LMFLFSDIL---DKYQPVLSVIACNTA 87 (271)
Q Consensus 15 ~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~I~~~----~~~~~~~ll---~k~~~~~IVIACNTa 87 (271)
.+||.-||..|.-.+..+.+..|..++.++++.- |.|.+= .+...+ ....++.+. +-.++|++..|...-
T Consensus 6 kVaIiGtG~iG~eLl~~lL~~hp~~ei~av~s~~--~ag~~l-~~a~~~~~~~~~~~~~~~~~~~~~~~vDvVF~AtP~g 82 (312)
T 1nvm_B 6 KVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGID--AASDGL-ARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATSAS 82 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSC--TTCHHH-HHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSCHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCCEEEEEEECC--CCCCHH-HHHHHCCCCCCCCCEEECCCCCCCCCCCEEEECCCCH
T ss_conf 6999868699999999998459986899999467--034204-5566628975556521010003202476899868837
Q ss_pred -CHHHHHHHHHHCCCCCCC---------CCCHHHHHHHHHCCCCCEEEEECHHHHCCHHH
Q ss_conf -263389998625777654---------45479999998407883299850677317016
Q gi|254780905|r 88 -FTLIKDELRSTFPSMAFL---------GAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137 (271)
Q Consensus 88 -sa~~~~~l~~~~~~ipii---------gii~~~~~a~~~~~~~~VgiLAT~~Ti~s~~y 137 (271)
+......++..-..+.+| -.+|.+... ...+.++..+.|-+++--....
T Consensus 83 ~~~~~~~~~~~~~~g~~vIDls~dfr~~~~~pe~~~~-~~~~~~~~~lvanpgc~~t~~~ 141 (312)
T 1nvm_B 83 AHVQNEALLRQAKPGIRLIDLTPAAIGPYCVPVVNLE-EHLGKLNVNMVTCGGQATIPMV 141 (312)
T ss_dssp HHHHHHHHHHHHCTTCEEEECSTTCSSCBCCHHHHTT-TTTTCSEEECCCHHHHHHHHHH
T ss_pred HHHHHHCCHHHHHCCCEEEECCHHCCCCCCCCCCCHH-HHHHHHCCCEECCCCHHHHHHH
T ss_conf 7776220588997899799663110476555102799-9862121473546834667799
No 65
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 1w24_A 2r17_A
Probab=44.52 E-value=2.2 Score=21.44 Aligned_cols=33 Identities=9% Similarity=0.044 Sum_probs=25.3
Q ss_pred HCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECHHHH
Q ss_conf 105887899805635889999998648997898285899
Q gi|254780905|r 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI 226 (271)
Q Consensus 188 ~~~~~D~iILGCTHyPll~~~i~~~~~~~v~iIDpa~~v 226 (271)
...++|.++.|.||.|++.. . .++.+++|+...
T Consensus 114 ~~~~~divi~GHTH~p~~~~-----~-~~~~iiNPGS~~ 146 (192)
T 1z2w_A 114 RQFDVDILISGHTHKFEAFE-----H-ENKFYINPGSAT 146 (192)
T ss_dssp HHHSSSEEECCSSCCCEEEE-----E-TTEEEEECCCTT
T ss_pred HHCCCCEEEECCCCCCEEEE-----E-CCEEEEECCCCC
T ss_conf 73589989978878503899-----9-999999799888
No 66
>3kg2_A Glutamate receptor 2; ION channel, membrane protein, alternative splicing, cell membrane, glycoprotein, ION transport, membrane; HET: ZK1 NAG BMA; 3.60A {Rattus norvegicus}
Probab=44.28 E-value=15 Score=15.96 Aligned_cols=63 Identities=11% Similarity=0.045 Sum_probs=38.6
Q ss_pred HHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCC--------------CCH----HHHHHHHHCCCCCEEE
Q ss_conf 9999999862169848997176202633899986257776544--------------547----9999998407883299
Q gi|254780905|r 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLG--------------AVP----AIKQAAAYTQSGLISI 125 (271)
Q Consensus 64 ~~~~~~~ll~k~~~~~IVIACNTasa~~~~~l~~~~~~ipiig--------------ii~----~~~~a~~~~~~~~Vgi 125 (271)
+...+ .++++ ++.+|+=+..+.++.+...+-+.+ ++|+|. +.| ++...+...+.++|++
T Consensus 50 ~~~~~-~l~~~-gV~aiiGp~~s~~~~~v~~~~~~~-~iP~is~s~~~~~~~~~~~r~~p~~~~ai~~ll~~~~W~~vai 126 (823)
T 3kg2_A 50 TNAFC-SQFSR-GVYAIFGFYDKKSVNTITSFCGTL-HVSFITPSFPTDGTHPFVIQMRPDLKGALLSLIEYYQWDKFAY 126 (823)
T ss_dssp HHHHH-HHHHT-TCSEEEECCCTTTHHHHHHHHHHT-TCEEEECSCCCSSCCSSEEECSCCCHHHHHHHHHHTTCSEEEE
T ss_pred HHHHH-HHHHC-CCEEEECCCCCHHHHHHHHHHHHC-CCCEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEE
T ss_conf 99999-99866-987999899718999999999867-9819984537898896699958289999999999879989999
Q ss_pred EECH
Q ss_conf 8506
Q gi|254780905|r 126 LSTP 129 (271)
Q Consensus 126 LAT~ 129 (271)
+...
T Consensus 127 iyd~ 130 (823)
T 3kg2_A 127 LYDS 130 (823)
T ss_dssp EECG
T ss_pred EEEC
T ss_conf 9979
No 67
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=44.06 E-value=15 Score=15.94 Aligned_cols=41 Identities=20% Similarity=0.246 Sum_probs=32.2
Q ss_pred CCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCC
Q ss_conf 488707987791058999999996899989999415789898
Q gi|254780905|r 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG 53 (271)
Q Consensus 12 ~~~~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG 53 (271)
....|.|-=||-.||+..+.|.+.-+..++.-| |....|||
T Consensus 5 ~~~kvaIIG~GPaGl~aA~~L~~~g~~~~V~v~-E~~~~~gG 45 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIY-EKQLVPFG 45 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEE-CSSSSSCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCEEEEE-CCCCCCCC
T ss_conf 798699989668999999999847999879997-78999997
No 68
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide- binding, phosphoprotein, polymorphism; HET: ADP; 1.30A {Homo sapiens} PDB: 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3fzh_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 1ngh_A* 1ngd_A* 1ngf_A* 1bup_A* 1nga_A* ...
Probab=43.10 E-value=15 Score=15.84 Aligned_cols=43 Identities=19% Similarity=0.267 Sum_probs=30.9
Q ss_pred CCCCCEEEE--CCCCHHHHHHHHHHHCCC-CCE-EEECHHHHHHHHH
Q ss_conf 058878998--056358899999986489-978-9828589999999
Q gi|254780905|r 189 GKRTDVIVL--ACTHYPLIVHVFRQLSPW-PVD-WLDNSDSIARRAR 231 (271)
Q Consensus 189 ~~~~D~iIL--GCTHyPll~~~i~~~~~~-~v~-iIDpa~~va~~~~ 231 (271)
...+|.++| |++-.|++++.+++.++. .+. -+||-++||+=+.
T Consensus 349 ~~~i~~V~LvGG~sr~P~v~~~l~~~f~~~~v~~~~np~~aVa~GAa 395 (404)
T 3i33_A 349 KGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAA 395 (404)
T ss_dssp GGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHH
T ss_pred HHHCCEEEEECCHHCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
T ss_conf 77899899989300327899999997199988878881536999999
No 69
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structure initiative; 1.80A {Bacteroides fragilis YCH46}
Probab=42.58 E-value=16 Score=15.79 Aligned_cols=38 Identities=16% Similarity=0.225 Sum_probs=18.6
Q ss_pred HHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCC
Q ss_conf 99999986216984899717620263389998625777654
Q gi|254780905|r 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL 105 (271)
Q Consensus 65 ~~~~~~ll~k~~~~~IVIACNTasa~~~~~l~~~~~~ipii 105 (271)
...+..++++.+... ..|+++. .+++.+++..+++-++
T Consensus 16 ~~~l~~~L~~~g~~v--~~a~~~~-~al~~l~~~~~dlill 53 (140)
T 2qr3_A 16 LTAVQLLLKNHFSKV--ITLSSPV-SLSTVLREENPEVVLL 53 (140)
T ss_dssp HHHHHHHHTTTSSEE--EEECCHH-HHHHHHHHSCEEEEEE
T ss_pred HHHHHHHHHHCCCEE--EEECCHH-HHHHHHHHCCCCEEEE
T ss_conf 999999999789999--9989999-9999997279999999
No 70
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=42.14 E-value=3 Score=20.55 Aligned_cols=32 Identities=16% Similarity=0.132 Sum_probs=24.6
Q ss_pred CCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECHHHH
Q ss_conf 05887899805635889999998648997898285899
Q gi|254780905|r 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI 226 (271)
Q Consensus 189 ~~~~D~iILGCTHyPll~~~i~~~~~~~v~iIDpa~~v 226 (271)
..++|.++.|-||.|++.. . .+..+|+|+...
T Consensus 139 ~~~~dvvv~GHTH~p~~~~-----~-~g~l~iNPGS~~ 170 (215)
T 2a22_A 139 RLDCDILVTGHTHKLRVFE-----K-NGKLFLNPGTAT 170 (215)
T ss_dssp HHTCSEEEECSSCCCEEEE-----E-TTEEEEECCCSS
T ss_pred CCCCCEEEECCCCCCCEEE-----E-CCEEEEECCCCC
T ss_conf 0289989979989764799-----9-999999489877
No 71
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, class I; coenzyme A, flavin adenine dinucleotide, selenomethionine, FAD, flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=41.60 E-value=16 Score=15.69 Aligned_cols=39 Identities=8% Similarity=0.140 Sum_probs=32.6
Q ss_pred CEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCC
Q ss_conf 707987791058999999996899989999415789898
Q gi|254780905|r 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYG 53 (271)
Q Consensus 15 ~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG 53 (271)
-|.|.-+|.+||+..+.+++..+..+++-+-.....+|.
T Consensus 38 diVIIGgG~AGl~aA~~l~~~~~~~~V~lie~~~~~~~~ 76 (480)
T 3cgb_A 38 NYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYA 76 (480)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC
T ss_conf 999999779999999999826999809999698747777
No 72
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=40.92 E-value=9.8 Score=17.13 Aligned_cols=48 Identities=13% Similarity=0.198 Sum_probs=29.9
Q ss_pred CCCCEEEEECCCCHHHHHHHHHHHCCC-CCEEEEECCCC---------CCCCCCCHHHH
Q ss_conf 488707987791058999999996899-98999941578---------98989898999
Q gi|254780905|r 12 LQNSILIFDSGIGGLIVLQKMRFLMPE-YHFIYVADDVG---------FPYGNWEDHAL 60 (271)
Q Consensus 12 ~~~~IgifDSGiGGLtv~~~l~~~lP~-~~~iY~~D~~~---------~PYG~ks~~~I 60 (271)
|+ .|.|.=+|.+||+..+.|.+.++. .++.-+-.+.+ ++-|..+.+++
T Consensus 1 Mk-kVvIIGgG~AGl~aA~~l~~~~~~~~~VtlIe~~~~~~~~p~~~~v~~g~~~~~~~ 58 (409)
T 3h8l_A 1 MT-KVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDEL 58 (409)
T ss_dssp -C-EEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCE
T ss_pred CC-EEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHCCCCCHHHH
T ss_conf 98-09998886999999999982389889799996888655676556773187788995
No 73
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionine MAD, decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=38.01 E-value=18 Score=15.33 Aligned_cols=67 Identities=12% Similarity=0.038 Sum_probs=35.3
Q ss_pred HHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCC
Q ss_conf 999999689998999941578989898989999999999999862169848997176202633899986257776544
Q gi|254780905|r 29 LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLG 106 (271)
Q Consensus 29 ~~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACNTasa~~~~~l~~~~~~ipiig 106 (271)
.+..++-.|+.-+ .+|--...| .+.++..+ ...++++ .|+++|=+-.+.-..-..+.|.+. +||+.|
T Consensus 69 ~~aV~rga~~~~i--v~DmPf~sy--~~~~~a~~----~a~~~~~-~GadaVKlEgg~~~~~~I~~L~~~--GIPV~g 135 (264)
T 1m3u_A 69 TAAVRRGAPNCLL--LADLPFMAY--ATPEQAFE----NAATVMR-AGANMVKIEGGEWLVETVQMLTER--AVPVCG 135 (264)
T ss_dssp HHHHHHHCTTSEE--EEECCTTSS--SSHHHHHH----HHHHHHH-TTCSEEECCCSGGGHHHHHHHHHT--TCCEEE
T ss_pred HHHHHHHCCCCCE--EECCCCCCC--CCCHHHHH----HHHHHHH-CCCCEEEECCCCHHHHHHHHHHHC--CCEEEE
T ss_conf 9999852446526--836885222--45599999----9999997-199789846971078999999987--986876
No 74
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=37.04 E-value=19 Score=15.23 Aligned_cols=29 Identities=14% Similarity=0.101 Sum_probs=17.8
Q ss_pred CCCCCCCCCEEEEECCCCHHHHHHHHHHHC
Q ss_conf 344634887079877910589999999968
Q gi|254780905|r 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLM 36 (271)
Q Consensus 7 ~~~~~~~~~IgifDSGiGGLtv~~~l~~~l 36 (271)
|.-.+|-+ ||+.==|.=|.-+.+.|.+.-
T Consensus 16 ~~g~~mmk-Ig~IGlG~MG~~mA~~L~~~g 44 (310)
T 3doj_A 16 PRGSHMME-VGFLGLGIMGKAMSMNLLKNG 44 (310)
T ss_dssp --CCCSCE-EEEECCSHHHHHHHHHHHHTT
T ss_pred HCCCCCCE-EEEECHHHHHHHHHHHHHHCC
T ss_conf 44477687-978716889999999999789
No 75
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=35.58 E-value=7.1 Score=18.07 Aligned_cols=83 Identities=18% Similarity=0.173 Sum_probs=48.0
Q ss_pred CCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHH
Q ss_conf 34887079877910589999999968999899994157898989898999999999999986216984899717620263
Q gi|254780905|r 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTL 90 (271)
Q Consensus 11 ~~~~~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACNTasa~ 90 (271)
+.++.+.|+-.|-.|..+++++++. ++.+++-|-|...-.-|.. -..+.-+...-+..++.+..++.+++|-...+..
T Consensus 2 n~k~rvlI~Gag~~g~~l~~~l~~~-~~y~vvgfiD~d~~~~g~~-i~gi~V~~~~~l~~~i~~~~i~~viia~p~~~~~ 79 (141)
T 3nkl_A 2 NAKKKVLIYGAGSAGLQLANMLRQG-KEFHPIAFIDDDRKKHKTT-MQGITIYRPKYLERLIKKHCISTVLLAVPSASQV 79 (141)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHS-SSEEEEEEECSCGGGTTCE-ETTEEEECGGGHHHHHHHHTCCEEEECCTTSCHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC-CCCEEEEEEECCCCCCEEE-ECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHH
T ss_conf 9877799987798999999999878-9966999995786414148-6782036687877888646863899945888999
Q ss_pred HHHHH
Q ss_conf 38999
Q gi|254780905|r 91 IKDEL 95 (271)
Q Consensus 91 ~~~~l 95 (271)
-...+
T Consensus 80 ~~~~l 84 (141)
T 3nkl_A 80 QKKVI 84 (141)
T ss_dssp HHHHH
T ss_pred HHHHH
T ss_conf 99999
No 76
>3cu5_A Two component transcriptional regulator, ARAC family; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=35.07 E-value=20 Score=15.03 Aligned_cols=13 Identities=8% Similarity=-0.125 Sum_probs=6.3
Q ss_pred HHHHHHHHHCCCC
Q ss_conf 3389998625777
Q gi|254780905|r 90 LIKDELRSTFPSM 102 (271)
Q Consensus 90 ~~~~~l~~~~~~i 102 (271)
-+++.+++.-|++
T Consensus 40 eal~~~~~~~pdl 52 (141)
T 3cu5_A 40 NAIQIALKHPPNV 52 (141)
T ss_dssp HHHHHHTTSCCSE
T ss_pred HHHHHHHHCCCCE
T ss_conf 9999998679998
No 77
>2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9
Probab=32.62 E-value=22 Score=14.85 Aligned_cols=55 Identities=18% Similarity=0.308 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHH
Q ss_conf 589999999968999899994157898989898999999999999986216984899717620263389
Q gi|254780905|r 25 GLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKD 93 (271)
Q Consensus 25 GLtv~~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACNTasa~~~~ 93 (271)
+|++|..+.+.|-+ +...|.||.+ | - ..+. +..-+. +++...+|+|-+.+...++
T Consensus 7 SL~~L~~vi~~L~~------~~~~~iPyR~-S--k-LT~l---L~~slg-gn~~t~~i~~isp~~~~~~ 61 (100)
T 2kin_B 7 SLSALGNVISALAE------GTKTHVPYRD-S--K-MTRI---LQDSLD-GNCRTTIVICCSPSVFNEA 61 (100)
T ss_dssp HHHHHHHHHHHHHH------TCCSSCCGGG-C--H-HHHH---THHHHH-SSEEEEEEEEECCBGGGHH
T ss_pred HHHHHHHHHHHHHC------CCCCCCCCCC-C--H-HHHE---EECCCC-CCCCEEEEEECCCCCCCHH
T ss_conf 99999999999970------7999788647-8--4-3612---321479-9865478774387534788
No 78
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=32.56 E-value=22 Score=14.76 Aligned_cols=108 Identities=11% Similarity=0.101 Sum_probs=50.0
Q ss_pred CCCCEEEEECC--CCHHH--HHHHHHHHCCC-CCEEEEECCCCCCC-C----CCCHHHHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 48870798779--10589--99999996899-98999941578989-8----9898999999999999986216984899
Q gi|254780905|r 12 LQNSILIFDSG--IGGLI--VLQKMRFLMPE-YHFIYVADDVGFPY-G----NWEDHALKKRLMFLFSDILDKYQPVLSV 81 (271)
Q Consensus 12 ~~~~IgifDSG--iGGLt--v~~~l~~~lP~-~~~iY~~D~~~~PY-G----~ks~~~I~~~~~~~~~~ll~k~~~~~IV 81 (271)
|...|.++... -||.| +++.+.+.+++ .++.|+ |-...|. . ....++ ..++.+.+.+ +|.||
T Consensus 1 MskKIl~i~GS~R~~s~t~~la~~~~~~l~~~~ev~~~-~~~~~p~~~~~~~~~~~~~----~~~~~~~l~~---aD~iI 72 (192)
T 3fvw_A 1 MSKRILFIVGSFSEGSFNRQLAKKAETIIGDRAQVSYL-SYDRVPFFNQDLETSVHPE----VAHAREEVQE---ADAIW 72 (192)
T ss_dssp --CEEEEEESCCSTTCHHHHHHHHHHHHHTTSSEEEEC-CCSSCCCCCGGGTTSCCHH----HHHHHHHHHH---CSEEE
T ss_pred CCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEE-ECCCCCCCCCCCCCCCCHH----HHHHHHHHHC---CCCEE
T ss_conf 99849999899999987999999999875799779998-6753566884112378889----9999999965---99589
Q ss_pred EEC----CCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEECHHHH
Q ss_conf 717----620263389998625777654454799999984078832998506773
Q gi|254780905|r 82 IAC----NTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132 (271)
Q Consensus 82 IAC----NTasa~~~~~l~~~~~~ipiigii~~~~~a~~~~~~~~VgiLAT~~Ti 132 (271)
++. -+.|+.. ..+-++. ..+.-...+..+ ...+.|.+++++|.+..
T Consensus 73 ~~sP~Y~~~~~~~l-K~~iD~~-~~~~~~~~~~~~---~~~~~K~~~~v~~~~g~ 122 (192)
T 3fvw_A 73 IFSPVYNYAIPGPV-KNLLDWL-SRSLDLSDPTGP---SVLQDKIVTVSSVANGA 122 (192)
T ss_dssp EECCCBTTBCCHHH-HHHHHHH-TSCSCSSCTTSC---CTTTTCEEEEEEESCCC
T ss_pred EECCHHCCCCCHHH-HHHHHHH-HHHCCCCCCCCC---CCCCCCEEEEEEECCCC
T ss_conf 93531234578899-9999986-531234566665---20269959999978983
No 79
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=32.51 E-value=22 Score=14.76 Aligned_cols=100 Identities=10% Similarity=0.084 Sum_probs=58.4
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCC-------------H-HHHHHHHHC
Q ss_conf 89898999999999999986216984899717620263389998625777654454-------------7-999999840
Q gi|254780905|r 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-------------P-AIKQAAAYT 118 (271)
Q Consensus 53 G~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACNTasa~~~~~l~~~~~~ipiigii-------------~-~~~~a~~~~ 118 (271)
+..+..++......-+...+++..+|++++.=-|.++++.-.. +.+-++|++++. + ..+.++.
T Consensus 91 ~~~~~~~~~~~~i~~~~~~~~~~kPD~vlV~GDr~~~la~ala-a~~~~Ipi~HiegG~rs~~~~~~~peE~~R~~i~-- 167 (403)
T 3ot5_A 91 KGQTLAEITSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLA-TFYQQKMLGHVEAGLRTWNKYSPFPEEMNRQLTG-- 167 (403)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHH-HHHTTCEEEEESCCCCCSCTTSSTTHHHHHHHHH--
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHH-HHHHCCCEEEEECCCCCCCCCCCCCHHHHHHCCC--
T ss_conf 9999999999999999999997399999996888048999999-9981997899964665677678980787641246--
Q ss_pred CCCCEEEEECHHHHCCHHHHHHHHHCCCCCEEEECCCCCHHH
Q ss_conf 788329985067731701689985127885797705642257
Q gi|254780905|r 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILAS 160 (271)
Q Consensus 119 ~~~~VgiLAT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~lv~ 160 (271)
+-.++-.-+|+. ..+++++.--....|+..+++.+=.
T Consensus 168 kls~~hf~~t~~-----~~~~L~~~G~~~~~I~~vG~~~iD~ 204 (403)
T 3ot5_A 168 VMADIHFSPTKQ-----AKENLLAEGKDPATIFVTGNTAIDA 204 (403)
T ss_dssp HHCSEEEESSHH-----HHHHHHHTTCCGGGEEECCCHHHHH
T ss_pred CEEEEEEEECHH-----HHHHHHHCCCCCCEEEEECCCCHHH
T ss_conf 300599850278-----7768875289966089968850888
No 80
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase, metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=32.02 E-value=23 Score=14.70 Aligned_cols=46 Identities=13% Similarity=0.137 Sum_probs=31.4
Q ss_pred CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 99989999415789898989899999999999998621698489971
Q gi|254780905|r 37 PEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIA 83 (271)
Q Consensus 37 P~~~~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIA 83 (271)
|...|+.+||....+.|.............+.. ..++..+++|+.+
T Consensus 5 ~~~rf~v~gD~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~pdfvl~~ 50 (313)
T 1ute_A 5 PILRFVAVGDWGGVPNAPFHTAREMANAKAIAT-TVKTLGADFILSL 50 (313)
T ss_dssp CCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHH-HHHHHCCSEEEEC
T ss_pred CCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHH-HHHHCCCCEEEEC
T ss_conf 987999994699999754451789999999999-9863699899989
No 81
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=31.73 E-value=23 Score=14.67 Aligned_cols=106 Identities=11% Similarity=0.101 Sum_probs=52.0
Q ss_pred CEEEEECCCCHH---HHHHHHHHHCCCCCEEEEECCC--C-----CCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf 707987791058---9999999968999899994157--8-----98989898999999999999986216984899717
Q gi|254780905|r 15 SILIFDSGIGGL---IVLQKMRFLMPEYHFIYVADDV--G-----FPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIAC 84 (271)
Q Consensus 15 ~IgifDSGiGGL---tv~~~l~~~lP~~~~iY~~D~~--~-----~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIAC 84 (271)
.|||. |.|+. ..++.+ ..+|+.+++++.|.- + -=||... +..-.+.+++...+|+|+|++
T Consensus 7 rigii--G~G~~~~~~h~~~l-~~~~~~~lvav~d~~~~~~~~~a~~~~~~~-------~~~~~~~ll~~~~iD~V~I~t 76 (359)
T 3m2t_A 7 KVGLV--GIGAQMQENLLPSL-LQMQDIRIVAACDSDLERARRVHRFISDIP-------VLDNVPAMLNQVPLDAVVMAG 76 (359)
T ss_dssp EEEEE--CCSHHHHHTHHHHH-HTCTTEEEEEEECSSHHHHGGGGGTSCSCC-------EESSHHHHHHHSCCSEEEECS
T ss_pred EEEEE--CCHHHHHHHHHHHH-HHCCCCEEEEEECCCHHHHHHHHHHCCCCC-------EECCHHHHHCCCCCCEEEECC
T ss_conf 89999--17199999999999-839995899998899999999998849985-------318999996599999899878
Q ss_pred CCCCHH--HHHHHHHH---CCCCCCCCCCHHHHHHHH-HCCCCCEEEEECHH
Q ss_conf 620263--38999862---577765445479999998-40788329985067
Q gi|254780905|r 85 NTAFTL--IKDELRST---FPSMAFLGAVPAIKQAAA-YTQSGLISILSTPA 130 (271)
Q Consensus 85 NTasa~--~~~~l~~~---~~~ipiigii~~~~~a~~-~~~~~~VgiLAT~~ 130 (271)
-+.+.. +...++.. +...|+-.-...++..+. ..+++.+.-.+...
T Consensus 77 p~~~H~~~~~~al~~Gk~V~~EKP~a~~~~ea~~l~~~a~~~~~~~~v~~~~ 128 (359)
T 3m2t_A 77 PPQLHFEMGLLAMSKGVNVFVEKPPCATLEELETLIDAARRSDVVSGVGMNF 128 (359)
T ss_dssp CHHHHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHTCCEEECCHH
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCE
T ss_conf 6354358999998439809998533031799999886654113343342000
No 82
>3lov_A Protoporphyrinogen oxidase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=31.08 E-value=23 Score=14.60 Aligned_cols=31 Identities=19% Similarity=0.358 Sum_probs=23.9
Q ss_pred CCCEEEEECCCCHHHHHHHHHHHCCCCCEEE
Q ss_conf 8870798779105899999999689998999
Q gi|254780905|r 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIY 43 (271)
Q Consensus 13 ~~~IgifDSGiGGLtv~~~l~~~lP~~~~iY 43 (271)
.+.|.|.=+|++||+....|.+.-++.++.-
T Consensus 4 ~kkV~IIGaGisGL~aA~~L~~~~~G~~V~v 34 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITL 34 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCCEEE
T ss_conf 9809998988899999999983698997899
No 83
>3jpw_A Glutamate [NMDA] receptor subunit epsilon-2; amino terminal domain, zinc, phenylethanolamine, calcium, cell junction, cell membrane; HET: NAG; 2.80A {Rattus norvegicus} PDB: 3jpy_A*
Probab=30.97 E-value=24 Score=14.59 Aligned_cols=44 Identities=16% Similarity=0.101 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHCCCCCEEEEECCCCC---HHHHHHHHHHCCCCCCCCC
Q ss_conf 999999999862169848997176202---6338999862577765445
Q gi|254780905|r 62 KRLMFLFSDILDKYQPVLSVIACNTAF---TLIKDELRSTFPSMAFLGA 107 (271)
Q Consensus 62 ~~~~~~~~~ll~k~~~~~IVIACNTas---a~~~~~l~~~~~~ipiigi 107 (271)
.....+|+ ++...++..||-+=++.+ +..+..+-+.+ +||+|+.
T Consensus 49 ~~~~~~c~-l~~~~~v~~ivg~~~s~~~~~a~~v~~i~~~~-~IP~is~ 95 (363)
T 3jpw_A 49 SIITRICD-LMSDRKIQGVVFADDTDQEAIAQILDFISAQT-LTPILGI 95 (363)
T ss_dssp HHHHHHHH-HHHHSCCSCEEEEECSCCTHHHHHHHHHHHHH-TCEEEEE
T ss_pred HHHHHHHH-HHHHCCCEEEEECCCCCCHHHHHHHHHHHHCC-CCCEEEE
T ss_conf 99999999-87408967999469986078899999998637-9888983
No 84
>3mvk_A Protein FUCU, protein RBSD; PSI, MCSG, structural genomics, midwest center for structura genomics, protein structure initiative; HET: PGE; 1.65A {Bifidobacterium longum subsp}
Probab=30.96 E-value=23 Score=14.71 Aligned_cols=36 Identities=28% Similarity=0.424 Sum_probs=18.9
Q ss_pred CCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCC
Q ss_conf 433446348870798779105899999999689998
Q gi|254780905|r 5 NYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYH 40 (271)
Q Consensus 5 ~~~~~~~~~~~IgifDSGiGGLtv~~~l~~~lP~~~ 40 (271)
|||+...-+....|--.|.+|+.+++.+...+|-+.
T Consensus 32 g~P~~~~~~~~~~i~l~~~~~~~~l~aIL~~l~le~ 67 (148)
T 3mvk_A 32 NFPAESIGKNAIVVRMDGHGGGEILKAILTVFPLDT 67 (148)
T ss_dssp TSCHHHHTTTSEEEEETTCCHHHHHHHHHHHCCBCS
T ss_pred CCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCH
T ss_conf 989887787765898499981799999998677106
No 85
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=30.62 E-value=22 Score=14.82 Aligned_cols=23 Identities=26% Similarity=0.442 Sum_probs=19.5
Q ss_pred CEEEEECCCCHHHHHHHHHHHCC
Q ss_conf 70798779105899999999689
Q gi|254780905|r 15 SILIFDSGIGGLIVLQKMRFLMP 37 (271)
Q Consensus 15 ~IgifDSGiGGLtv~~~l~~~lP 37 (271)
-|.|.=+|++||+....|.+.-.
T Consensus 18 ~V~IIGaGiaGL~aA~~L~~~G~ 40 (478)
T 2ivd_A 18 NVAVVGGGISGLAVAHHLRSRGT 40 (478)
T ss_dssp CEEEECCBHHHHHHHHHHHTTTC
T ss_pred CEEEECCCHHHHHHHHHHHHCCC
T ss_conf 98998987899999999985899
No 86
>3hsy_A Glutamate receptor 2; ligand-gated ION channel, synapse, alter splicing, cell junction, cell membrane, endoplasmic reticul glycoprotein; HET: NAG BMA; 1.75A {Rattus norvegicus} PDB: 3h5v_A* 3h5w_A 2wjw_A* 2wjx_A
Probab=30.51 E-value=24 Score=14.54 Aligned_cols=103 Identities=11% Similarity=0.060 Sum_probs=50.8
Q ss_pred EEEECC-CCHHHHHHHHHHHCCC--CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHH
Q ss_conf 798779-1058999999996899--9899994157898989898999999999999986216984899717620263389
Q gi|254780905|r 17 LIFDSG-IGGLIVLQKMRFLMPE--YHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKD 93 (271)
Q Consensus 17 gifDSG-iGGLtv~~~l~~~lP~--~~~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACNTasa~~~~ 93 (271)
|||+.+ ..-..-++-..+..=. ..+.+. ..+..+++ +. . +.+.+..++++ ++.+||=++.+.++.+..
T Consensus 7 ~if~~~~~~~~~a~~~Ai~~iN~~~~~l~~~--~~~~~~~d--~~---~-~~~~~~~l~~~-~v~aiiGp~~s~~~~~~~ 77 (376)
T 3hsy_A 7 GLFPRGADQEYSAFRVGMVQFSTSEFRLTPH--IDNLEVAN--SF---A-VTNAFCSQFSR-GVYAIFGFYDKKSVNTIT 77 (376)
T ss_dssp EEEETTCHHHHHHHHHHHHHTCCSSCEEEEE--EEEECTTC--HH---H-HHHHHHHHHHT-TCSEEEECCCTTTHHHHH
T ss_pred EEECCCCHHHHHHHHHHHHHHHCCCCCCCCE--EEEEECCC--HH---H-HHHHHHHHHHC-CCEEEECCCCCHHHHHHH
T ss_conf 9987998599999999999983189964874--89971699--89---9-99999999875-986999999818899999
Q ss_pred HHHHHCCCCCCCC--------------CCH----HHHHHHHHCCCCCEEEEECH
Q ss_conf 9986257776544--------------547----99999984078832998506
Q gi|254780905|r 94 ELRSTFPSMAFLG--------------AVP----AIKQAAAYTQSGLISILSTP 129 (271)
Q Consensus 94 ~l~~~~~~ipiig--------------ii~----~~~~a~~~~~~~~VgiLAT~ 129 (271)
.+-+.+ ++|+|+ +.| ++...+...+.++|+++...
T Consensus 78 ~~~~~~-~ip~is~s~~~~~~~~~~~~~~p~~~~a~~~ll~~~~w~~v~iv~~~ 130 (376)
T 3hsy_A 78 SFCGTL-HVSFITPSFPTDGTHPFVIQMRPDLKGALLSLIEYYQWDKFAYLYDS 130 (376)
T ss_dssp HHHHHH-TCEEEECSCCCCSCCTTEEECSCCCHHHHHHHHHHTTCCEEEEEECS
T ss_pred HHHHHC-CCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECC
T ss_conf 998633-66433455678999866999768999999999997499779999748
No 87
>2yw2_A Phosphoribosylamine--glycine ligase; glycinamide ribonucleotide synthetase, GAR synthetase, ATP binding, purine nucleotide biosynthetic pathway; HET: ATP; 1.80A {Aquifex aeolicus} PDB: 2yya_A
Probab=30.23 E-value=24 Score=14.51 Aligned_cols=77 Identities=17% Similarity=0.239 Sum_probs=33.7
Q ss_pred EEEEECCCCHH--HHHHHHHHHCCCCCEEEEECCCCCC---------CC-CCCHHHHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 07987791058--9999999968999899994157898---------98-989899999999999998621698489971
Q gi|254780905|r 16 ILIFDSGIGGL--IVLQKMRFLMPEYHFIYVADDVGFP---------YG-NWEDHALKKRLMFLFSDILDKYQPVLSVIA 83 (271)
Q Consensus 16 IgifDSGiGGL--tv~~~l~~~lP~~~~iY~~D~~~~P---------YG-~ks~~~I~~~~~~~~~~ll~k~~~~~IVIA 83 (271)
|.|.-|| |= .+.++|. +-|...-+|++. -| | |- ..+.+.|. + +..+.++|+|++.
T Consensus 3 vliiG~G--grEha~~~~l~-~~~~~~~~~~~~-~N-~g~~~~~~~~~~~~~d~~~i~-------~-~~~~~~id~vi~g 69 (424)
T 2yw2_A 3 VLVVGNG--GREHAIAWKVA-QSPLVKELYVAK-GN-AGIWEIAKRVDISPTDVEKLA-------E-FAKNEGVDFTIVG 69 (424)
T ss_dssp EEEEESS--HHHHHHHHHHT-TCTTCSEEEEEE-CC-TTGGGTSEEECSCTTCHHHHH-------H-HHHHHTCSEEEEC
T ss_pred EEEECCC--HHHHHHHHHHH-HCCCCCEEEEEC-CC-HHHHHHCCEEEECCCCHHHHH-------H-HHHHHCCCEEEEC
T ss_conf 9998958--99999999998-589988899988-98-889854300862889999999-------9-9999699999989
Q ss_pred CCCCCHH-HHHHHHHHCCCCCCCCC
Q ss_conf 7620263-38999862577765445
Q gi|254780905|r 84 CNTAFTL-IKDELRSTFPSMAFLGA 107 (271)
Q Consensus 84 CNTasa~-~~~~l~~~~~~ipiigi 107 (271)
.-...+. ..+.|++. ++|++|-
T Consensus 70 ~e~~l~~~~a~~l~~~--gi~~~gp 92 (424)
T 2yw2_A 70 PEAPLVEGIVDEFEKR--GLKIFGP 92 (424)
T ss_dssp SHHHHHTTHHHHHHHT--TCCEESC
T ss_pred CCHHHHHHHHHHHHHC--CCCCCCH
T ss_conf 8478888899999867--9831384
No 88
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative; 2.04A {Staphylococcus aureus}
Probab=29.53 E-value=25 Score=14.43 Aligned_cols=39 Identities=8% Similarity=0.124 Sum_probs=16.8
Q ss_pred HHHHHHHHHCCCCCEEEEE-CCCCCHHHHHHHHHHCCCCCCC
Q ss_conf 9999998621698489971-7620263389998625777654
Q gi|254780905|r 65 MFLFSDILDKYQPVLSVIA-CNTAFTLIKDELRSTFPSMAFL 105 (271)
Q Consensus 65 ~~~~~~ll~k~~~~~IVIA-CNTasa~~~~~l~~~~~~ipii 105 (271)
.+.+..++++.+ .+-|++ |.+.. -+++.+++.-|++-++
T Consensus 16 r~~l~~~L~~~~-~~~vv~~a~~g~-eal~~~~~~~pDlvll 55 (133)
T 3b2n_A 16 RQAMVQLIKLHG-DFEILADTDNGL-DAMKLIEEYNPNVVIL 55 (133)
T ss_dssp HHHHHHHHHHHS-SEEEEEEESCHH-HHHHHHHHHCCSEEEE
T ss_pred HHHHHHHHHHCC-CEEEEEEECCHH-HHHHHHHHCCCCEEEE
T ss_conf 999999998689-969999989999-9999998569999999
No 89
>1sky_E F1-ATPase, F1-ATP synthase; F1FO ATP synthase, alpha3BETA3 subcomplex of F1-ATPase, hydrolase; 3.20A {Bacillus SP} SCOP: a.69.1.1 b.49.1.1 c.37.1.11
Probab=29.53 E-value=25 Score=14.43 Aligned_cols=66 Identities=12% Similarity=0.205 Sum_probs=33.9
Q ss_pred CCEEEE-ECCCCHHHHHHHHHHHCC---CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCH
Q ss_conf 870798-779105899999999689---9989999415789898989899999999999998621698489971762026
Q gi|254780905|r 14 NSILIF-DSGIGGLIVLQKMRFLMP---EYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFT 89 (271)
Q Consensus 14 ~~Igif-DSGiGGLtv~~~l~~~lP---~~~~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACNTasa 89 (271)
..+||| |||+|==+++..+.+..- +.-.||.+ -|+|.. |+.+ ..+.+.+...-+-.|+-|||++.
T Consensus 152 qr~~Ifg~~g~GKt~l~~~i~~~~~~~~~~v~V~~~------iGer~r-ev~e----~~~~~~~~~~l~~tv~v~ats~~ 220 (473)
T 1sky_E 152 GKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAG------VGERTR-EGND----LYHEMKDSGVISKTAMVFGQMNE 220 (473)
T ss_dssp CEEEEECCSSSCHHHHHHHHHHHHHHHTCCCEEEEE------ESSCHH-HHHH----HHHHHHHTSGGGGEEEEEECTTS
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEE------ECCCHH-HHHH----HHHHHHHCCCCCCEEEEEECCCC
T ss_conf 774555589988799999999867761598799999------540359-9999----99998645775211899978999
Q ss_pred H
Q ss_conf 3
Q gi|254780905|r 90 L 90 (271)
Q Consensus 90 ~ 90 (271)
-
T Consensus 221 p 221 (473)
T 1sky_E 221 P 221 (473)
T ss_dssp C
T ss_pred C
T ss_conf 8
No 90
>2ffc_A Orotidine 5-monophosphate decarboxylase; PV-PF10_0225, SGC, structural genomics, structural genomics consortium, lyase; HET: U5P; 1.70A {Plasmodium vivax} SCOP: c.1.2.3 PDB: 2guu_A*
Probab=29.17 E-value=19 Score=15.26 Aligned_cols=35 Identities=14% Similarity=-0.039 Sum_probs=21.7
Q ss_pred CCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECHHH
Q ss_conf 0588789980563588999999864899789828589
Q gi|254780905|r 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDS 225 (271)
Q Consensus 189 ~~~~D~iILGCTHyPll~~~i~~~~~~~v~iIDpa~~ 225 (271)
..+...+|-|=|+ |--...+++.+|+.. ++-|+-.
T Consensus 264 ~~g~~G~Vvgat~-p~el~~IR~~~p~~~-iLtPGIG 298 (353)
T 2ffc_A 264 NGEFVGFVVGANC-YDEIKKIRELFPDCY-ILAPGVG 298 (353)
T ss_dssp GTCCEEEEECTTC-HHHHHHHHHHCTTCC-EEECCBS
T ss_pred CCCCCCEEEEECC-HHHHHHHHHHCCCCE-EEECCCC
T ss_conf 2566554887250-888899998589985-9928867
No 91
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae TIGR4} SCOP: d.159.1.7
Probab=28.53 E-value=5.3 Score=18.91 Aligned_cols=32 Identities=9% Similarity=0.094 Sum_probs=25.0
Q ss_pred CCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECHHHH
Q ss_conf 05887899805635889999998648997898285899
Q gi|254780905|r 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI 226 (271)
Q Consensus 189 ~~~~D~iILGCTHyPll~~~i~~~~~~~v~iIDpa~~v 226 (271)
..++|.++.|=||.|++.. . +++.+++|+..-
T Consensus 103 ~~~~divi~GHTH~p~~~~-----~-~~~~iiNPGSvg 134 (176)
T 3ck2_A 103 EEEAAICLYGHLHVPSAWL-----E-GKILFLNPGSIS 134 (176)
T ss_dssp HTTCSEEECCSSCCEEEEE-----E-TTEEEEEECCSS
T ss_pred HCCCCEEEECCCCCCEEEE-----E-CCEEEEECCCCC
T ss_conf 5599899968977425999-----8-999999358866
No 92
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=28.29 E-value=26 Score=14.29 Aligned_cols=77 Identities=12% Similarity=0.025 Sum_probs=39.7
Q ss_pred CCCEEEEECCCCHHH----HHHHHHHH-CC--CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECC
Q ss_conf 887079877910589----99999996-89--998999941578989898989999999999999862169848997176
Q gi|254780905|r 13 QNSILIFDSGIGGLI----VLQKMRFL-MP--EYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACN 85 (271)
Q Consensus 13 ~~~IgifDSGiGGLt----v~~~l~~~-lP--~~~~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACN 85 (271)
+-.||| |-+.+=+ +++.+.+. .- +.++++ .|..+ +.+. -.+.++.++++ ++|.|++.+.
T Consensus 6 ~y~igv--s~~~~d~~~~~~~~~~~~ea~~~~G~~l~i-~~~~~------d~~~----q~~~i~~~i~~-~vDgIii~p~ 71 (325)
T 2x7x_A 6 HFRIGV--AQCSDDSWRHKMNDEILREAMFYNGVSVEI-RSAGD------DNSK----QAEDVHYFMDE-GVDLLIISAN 71 (325)
T ss_dssp CCEEEE--EESCCSHHHHHHHHHHHHHHTTSSSCEEEE-EECTT------CHHH----HHHHHHHHHHT-TCSEEEECCS
T ss_pred CEEEEE--EEECCCHHHHHHHHHHHHHHHHCCCCEEEE-EECCC------CHHH----HHHHHHHHHHC-CCCEEEEECC
T ss_conf 769999--810798999999999999999809988999-85999------9999----99999999986-9979999688
Q ss_pred CCCHH--HHHHHHHHCCCCCCC
Q ss_conf 20263--389998625777654
Q gi|254780905|r 86 TAFTL--IKDELRSTFPSMAFL 105 (271)
Q Consensus 86 Tasa~--~~~~l~~~~~~ipii 105 (271)
...+. +++.+++. ++|++
T Consensus 72 ~~~~~~~~i~~a~~~--gIPvV 91 (325)
T 2x7x_A 72 EAAPMTPIVEEAYQK--GIPVI 91 (325)
T ss_dssp SHHHHHHHHHHHHHT--TCCEE
T ss_pred CHHHHHHHHHHHHHC--CCCEE
T ss_conf 716579999999986--99689
No 93
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=28.25 E-value=22 Score=14.81 Aligned_cols=90 Identities=13% Similarity=0.120 Sum_probs=36.1
Q ss_pred CCCCCEEEEECHHHHCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 07883299850677317016899851278857977056422578776642677697999999999846541058878998
Q gi|254780905|r 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197 (271)
Q Consensus 118 ~~~~~VgiLAT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~lv~~iE~~~~~~~~~~~~~~~~l~~~l~~~~~~~~D~iIL 197 (271)
...++|.|+|| |.+.+...+. +...+.++.+..........+.++.-.. ....+.+.+.+ .+.|. |.
T Consensus 19 ~~~kkilvIGa-G~~~~~~a~~-L~~~~~~v~v~nRt~~ka~~la~~~~~~-~~~~~~l~~~l---------~~~Di-Vi 85 (144)
T 3oj0_A 19 NGGNKILLVGN-GMLASEIAPY-FSYPQYKVTVAGRNIDHVRAFAEKYEYE-YVLINDIDSLI---------KNNDV-II 85 (144)
T ss_dssp HCCCEEEEECC-SHHHHHHGGG-CCTTTCEEEEEESCHHHHHHHHHHHTCE-EEECSCHHHHH---------HTCSE-EE
T ss_pred CCCCEEEEECC-HHHHHHHHHH-HHHCCCEEEEEECCHHHHHHHHHHHCCC-HHHHHHHHHHH---------HHCCE-EE
T ss_conf 39999999997-8999999999-9856984689819999999998750522-02242089999---------76798-99
Q ss_pred CCC--CHHHHHHHHHHHCCCCCEEEECH
Q ss_conf 056--35889999998648997898285
Q gi|254780905|r 198 ACT--HYPLIVHVFRQLSPWPVDWLDNS 223 (271)
Q Consensus 198 GCT--HyPll~~~i~~~~~~~v~iIDpa 223 (271)
.|| ..|++.. +.+.++.-+||=+
T Consensus 86 ~aT~s~~~ii~~---~~~~~~~~iiDla 110 (144)
T 3oj0_A 86 TATSSKTPIVEE---RSLMPGKLFIDLG 110 (144)
T ss_dssp ECSCCSSCSBCG---GGCCTTCEEEECC
T ss_pred EECCCCCCEECH---HHCCCCCEEEEEC
T ss_conf 923899744468---7847997899706
No 94
>1t0k_B YL32, RP73, 60S ribosomal protein L30; joint and X-RAY refinement, ribosomal protein L30E, MBP fusion protein, ribosome; HET: MTT; 3.24A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1ck2_A 1cn7_A 1nmu_B* 3jyw_2
Probab=27.43 E-value=27 Score=14.19 Aligned_cols=57 Identities=21% Similarity=0.096 Sum_probs=30.4
Q ss_pred HHHHHCCCCCEEEEECCCCCHHHHHHHH---HHCCCCCCCCCC-HHHHHHHHHCCCCCEEEEE
Q ss_conf 9986216984899717620263389998---625777654454-7999999840788329985
Q gi|254780905|r 69 SDILDKYQPVLSVIACNTAFTLIKDELR---STFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 (271)
Q Consensus 69 ~~ll~k~~~~~IVIACNTasa~~~~~l~---~~~~~ipiigii-~~~~~a~~~~~~~~VgiLA 127 (271)
.+-+.++.++++++|.|... .....++ +.+ ++|++... .-.+......+..+++++|
T Consensus 31 ~kai~~gkaklViiA~D~s~-~~~~~i~~~~~~~-~Vpv~~~~~t~~eLG~a~Gk~~~vsvva 91 (105)
T 1t0k_B 31 VKSLRQGKSKLIIIAANTPV-LRKSELEYYAMLS-KTKVYYFQGGNNELGTAVGKLFRVGVVS 91 (105)
T ss_dssp HHHHHHTCCSEEEECTTCCH-HHHHHHHHHHHHH-TCEEEECSSCHHHHHHHTTCSSCCSEEE
T ss_pred HHHHHCCCCCEEEEECCCCH-HHHHHHHHHHHHC-CCCEEEECCCHHHHHHHHCCCCCEEEEE
T ss_conf 99998399729999687998-8999999999865-9981996789999999869988668999
No 95
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=27.20 E-value=27 Score=14.17 Aligned_cols=119 Identities=9% Similarity=0.094 Sum_probs=58.8
Q ss_pred CCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHH-------HHHHHHHHCCCCCEEEEEC
Q ss_conf 488707987791058999999996899989999415789898989899999999-------9999986216984899717
Q gi|254780905|r 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM-------FLFSDILDKYQPVLSVIAC 84 (271)
Q Consensus 12 ~~~~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~I~~~~~-------~~~~~ll~k~~~~~IVIAC 84 (271)
|+-.|||.=.|--|-..+....+.+|+.+++.+.|.- ++-...... .-.+.+++...+|+|+|+.
T Consensus 1 MklrvgiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~--------~~~~~~~~~~~~~~~~~~~~ell~~~~vD~V~i~t 72 (387)
T 3moi_A 1 MKIRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPN--------EDVRERFGKEYGIPVFATLAEMMQHVQMDAVYIAS 72 (387)
T ss_dssp CCEEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSC--------HHHHHHHHHHHTCCEESSHHHHHHHSCCSEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCC--------HHHHHHHHHHHCCCEECCHHHHHCCCCCCEEEECC
T ss_conf 9616999989699999999999739791999998799--------99999999985998589999996599998899908
Q ss_pred CCCC-H-HHHHHHHHH---CCCCCCCCCCHHHHHHHHH-CCCCCEEEEECHHHHCCHHHHH
Q ss_conf 6202-6-338999862---5777654454799999984-0788329985067731701689
Q gi|254780905|r 85 NTAF-T-LIKDELRST---FPSMAFLGAVPAIKQAAAY-TQSGLISILSTPATLRRTYTSN 139 (271)
Q Consensus 85 NTas-a-~~~~~l~~~---~~~ipiigii~~~~~a~~~-~~~~~VgiLAT~~Ti~s~~y~~ 139 (271)
.+.+ . .+...|++. +...|+---.+.++..+.. .+.+.+...+... --+..++.
T Consensus 73 p~~~H~~~~~~al~~gkhV~~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~-r~~p~~~~ 132 (387)
T 3moi_A 73 PHQFHCEHVVQASEQGLHIIVEKPLTLSRDEADRMIEAVERAGVHLVVGTSR-SHDPVVRT 132 (387)
T ss_dssp CGGGHHHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHHHTCCEEECCCG-GGSHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHCCEEEEEECC-CCCHHHHH
T ss_conf 9678999999998618956537888799999999999999809948972223-36848999
No 96
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protein structure initiative; 1.70A {Anopheles gambiae}
Probab=27.07 E-value=18 Score=15.43 Aligned_cols=21 Identities=33% Similarity=0.613 Sum_probs=16.9
Q ss_pred EEEEECCCCHHHHHHHHHHHCC
Q ss_conf 0798779105899999999689
Q gi|254780905|r 16 ILIFDSGIGGLIVLQKMRFLMP 37 (271)
Q Consensus 16 IgifDSGiGGLtv~~~l~~~lP 37 (271)
.|||| |.||=.+.+.+.+.+|
T Consensus 54 f~V~D-GhGG~~~a~~~~~~l~ 74 (304)
T 2i0o_A 54 FAVYD-GHGGAEVAQYCSLHLP 74 (304)
T ss_dssp EEEEE-CSSCSHHHHHHHHHHH
T ss_pred EEEEE-CCCCHHHHHHHHHHHH
T ss_conf 99997-9998699999999899
No 97
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=27.01 E-value=3.8 Score=19.88 Aligned_cols=110 Identities=10% Similarity=0.047 Sum_probs=54.2
Q ss_pred CCCCEEEEECCCCHHH--HHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHH-----HHHHHHHHHHCCCCCEEEEEC
Q ss_conf 4887079877910589--999999968999899994157898989898999999-----999999986216984899717
Q gi|254780905|r 12 LQNSILIFDSGIGGLI--VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR-----LMFLFSDILDKYQPVLSVIAC 84 (271)
Q Consensus 12 ~~~~IgifDSGiGGLt--v~~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~I~~~-----~~~~~~~ll~k~~~~~IVIAC 84 (271)
|+-.|||. |.|+.. .+.......|+.+++.+.|.--. + .++.... +..-.+.+++...+|+|+|++
T Consensus 1 M~irvgiI--G~G~~~~~~h~~~~~~~~~~~lvav~d~~~~----~-~~~~~~~~~~~~~~~~~~ell~~~~iD~V~i~t 73 (349)
T 3i23_A 1 MTVKMGFI--GFGKSANRYHLPYVMIRETLEVKTIFDLHVN----E-KAAAPFKEKGVNFTADLNELLTDPEIELITICT 73 (349)
T ss_dssp CCEEEEEE--CCSHHHHHTTHHHHTTCTTEEEEEEECTTCC----H-HHHHHHHTTTCEEESCTHHHHSCTTCCEEEECS
T ss_pred CCEEEEEE--CCCHHHHHHHHHHHHCCCCCEEEEEEECCHH----H-HHHHHHHCCCCCEECCHHHHHCCCCCCEEEECC
T ss_conf 95059999--8809999999999961989789999909999----9-999975538993579999996599988899888
Q ss_pred CCCCHH--HHHHHHHH---CCCCCCCCCCHHHHHHHHHC-CCCCEEEEEC
Q ss_conf 620263--38999862---57776544547999999840-7883299850
Q gi|254780905|r 85 NTAFTL--IKDELRST---FPSMAFLGAVPAIKQAAAYT-QSGLISILST 128 (271)
Q Consensus 85 NTasa~--~~~~l~~~---~~~ipiigii~~~~~a~~~~-~~~~VgiLAT 128 (271)
.+.+.. +...++.. +...|+-.-+..+...+... +.+.+...+-
T Consensus 74 p~~~H~~~~~~al~agkhV~~EKP~a~~~~e~~~l~~~~~~~g~~~~v~~ 123 (349)
T 3i23_A 74 PAHTHYDLAKQAILAGKSVIVEKPFCDTLEHAEELFALGQEKGVVVMPYQ 123 (349)
T ss_dssp CGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECC
T ss_pred CHHHHHHHHHHHHHCCCEEEEECCCCCHHHHCCCHHHHHHHCCCCCCCCC
T ss_conf 71456788999998499187517742002210220234542697543320
No 98
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=26.90 E-value=28 Score=14.13 Aligned_cols=67 Identities=12% Similarity=0.024 Sum_probs=42.5
Q ss_pred CCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHH---------HHHHHHHHCCCCCEEEEEC
Q ss_conf 8707987791058999999996899989999415789898989899999999---------9999986216984899717
Q gi|254780905|r 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM---------FLFSDILDKYQPVLSVIAC 84 (271)
Q Consensus 14 ~~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~I~~~~~---------~~~~~ll~k~~~~~IVIAC 84 (271)
-.|||.=.|-=|-..+..+.+..|+.+++++.|.- .+-...... .-.+.+++...+|+|+|++
T Consensus 3 irv~iiG~G~~g~~h~~~~~~~~~~~~l~~v~d~~--------~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~t 74 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVN--------QEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTS 74 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSS--------HHHHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECS
T ss_pred EEEEEECCHHHHHHHHHHHHHCCCCCEEEEEECCC--------HHHHHHHHHHHCCCCCEECCHHHHHCCCCCCEEEECC
T ss_conf 04999998299999999998428996899998999--------9999999998589980679999995599988899626
Q ss_pred CCCC
Q ss_conf 6202
Q gi|254780905|r 85 NTAF 88 (271)
Q Consensus 85 NTas 88 (271)
.+.+
T Consensus 75 p~~~ 78 (344)
T 3mz0_A 75 WGPA 78 (344)
T ss_dssp CGGG
T ss_pred CCCC
T ss_conf 5211
No 99
>3gaa_A Uncharacterized protein TA1441; the protein with unknown function from thermoplasma acidophilum, structural genomics,PSI, MCSG; 2.70A {Thermoplasma acidophilum}
Probab=26.33 E-value=28 Score=14.07 Aligned_cols=71 Identities=15% Similarity=0.196 Sum_probs=39.4
Q ss_pred CCCCCCCEEE--EECCCC--HHHHHHHHHHHCCCCCEEEEECCCCCC----------------CC-------------CC
Q ss_conf 4634887079--877910--589999999968999899994157898----------------98-------------98
Q gi|254780905|r 9 EKKLQNSILI--FDSGIG--GLIVLQKMRFLMPEYHFIYVADDVGFP----------------YG-------------NW 55 (271)
Q Consensus 9 ~~~~~~~Igi--fDSGiG--GLtv~~~l~~~lP~~~~iY~~D~~~~P----------------YG-------------~k 55 (271)
..++++|+-| | .|+| |--+..+|.+.+..+.+-++ |+..+| |. .=
T Consensus 21 ~~~l~~pvlI~gf-pg~G~Vg~ia~~~Li~~l~~~~ig~i-~s~~~Pp~~~~~~g~~~~p~riy~~~~~~~~l~~~~~p~ 98 (252)
T 3gaa_A 21 KRNYNNPVVLCGF-AGSTPTGVLAASYIVETLGMHQVAHL-ISQHIPPVAVFVGGKLRHPFRIYANNSNTVLVAMCEVPI 98 (252)
T ss_dssp GGGCCSCEEEEEC-CCSSSHHHHHHHHHHHHHTCEEEEEC-CCTTSCCCEECGGGCCBCSEEEEECTTSCEEEEEESSCC
T ss_pred CCCCCCCEEEEEC-CCCCHHHHHHHHHHHHHCCCEEEEEE-ECCCCCCEEEEECCEECCCEEEEECCCCEEEEEEECCCC
T ss_conf 5778898999968-98457999999999997798799999-468899789954996856169984389769999603689
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 989999999999999862169848997
Q gi|254780905|r 56 EDHALKKRLMFLFSDILDKYQPVLSVI 82 (271)
Q Consensus 56 s~~~I~~~~~~~~~~ll~k~~~~~IVI 82 (271)
+.+...+++..+++|. ++.+++.|+.
T Consensus 99 ~~~~~~~~~~~i~~~~-~~~gv~~ii~ 124 (252)
T 3gaa_A 99 SSAHIYEISNTLMNWI-DQVGASEIVI 124 (252)
T ss_dssp CGGGHHHHHHHHHHHH-HHHTCSEEEE
T ss_pred CHHHHHHHHHHHHHHH-HHCCCCEEEE
T ss_conf 8137999999999999-9829938999
No 100
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=26.22 E-value=19 Score=15.17 Aligned_cols=12 Identities=25% Similarity=0.589 Sum_probs=9.2
Q ss_pred EEEEECCCCHHHH
Q ss_conf 0798779105899
Q gi|254780905|r 16 ILIFDSGIGGLIV 28 (271)
Q Consensus 16 IgifDSGiGGLtv 28 (271)
|-+| ||+||++.
T Consensus 20 l~LF-sG~GG~~~ 31 (295)
T 2qrv_A 20 LSLF-DGIATGLL 31 (295)
T ss_dssp EEET-CTTTHHHH
T ss_pred EEEC-CCCCHHHH
T ss_conf 9979-57447999
No 101
>3db2_A Putative NADPH-dependent oxidoreductase; ZP_01370612.1, structural genomics, joint center for structural genomics, JCSG; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=25.96 E-value=29 Score=14.02 Aligned_cols=119 Identities=8% Similarity=0.075 Sum_probs=56.1
Q ss_pred CCCC--EEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHH-------HHHHHHHHCCCCCEEEE
Q ss_conf 4887--07987791058999999996899989999415789898989899999999-------99999862169848997
Q gi|254780905|r 12 LQNS--ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM-------FLFSDILDKYQPVLSVI 82 (271)
Q Consensus 12 ~~~~--IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~I~~~~~-------~~~~~ll~k~~~~~IVI 82 (271)
|++| |||.=.|-=|-..++.++ .+|+.+++.+.|.- .+....... .-.+.+++...+|+|+|
T Consensus 2 ~~~~lrvgiIG~G~~~~~h~~~~~-~~~~~~v~~v~d~~--------~~~~~~~~~~~~~~~~~~~~~ll~~~~iD~V~i 72 (354)
T 3db2_A 2 MYNPVGVAAIGLGRWAYVMADAYT-KSEKLKLVTCYSRT--------EDKREKFGKRYNCAGDATMEALLAREDVEMVII 72 (354)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHT-TCSSEEEEEEECSS--------HHHHHHHHHHHTCCCCSSHHHHHHCSSCCEEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHH-HCCCCEEEEEECCC--------HHHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEE
T ss_conf 989844999938399999999998-58994899998899--------999999999819983389999956999988998
Q ss_pred ECCCCCHH--HHHHHHHH---CCCCCCCCCCHHHHHHHHH-CCCCCEEEEECHHHHCCHHHHHH
Q ss_conf 17620263--38999862---5777654454799999984-07883299850677317016899
Q gi|254780905|r 83 ACNTAFTL--IKDELRST---FPSMAFLGAVPAIKQAAAY-TQSGLISILSTPATLRRTYTSNL 140 (271)
Q Consensus 83 ACNTasa~--~~~~l~~~---~~~ipiigii~~~~~a~~~-~~~~~VgiLAT~~Ti~s~~y~~~ 140 (271)
+..+.+.. +...+++. +...|+---...+++.... .+.+.....+-.. --+..++.+
T Consensus 73 ~tp~~~h~~~~~~al~~gk~V~~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~~-r~~p~~~~~ 135 (354)
T 3db2_A 73 TVPNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGHSS-RRLGALRKM 135 (354)
T ss_dssp CSCTTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEECGG-GGSHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEE-EEHHHHHHH
T ss_conf 797788888899999789979996686432378888888998607764222100-001466777
No 102
>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D*
Probab=25.72 E-value=29 Score=13.99 Aligned_cols=22 Identities=23% Similarity=0.268 Sum_probs=12.9
Q ss_pred EECCCCHHHHHHHHHHHCCCCCEEEE
Q ss_conf 98056358899999986489978982
Q gi|254780905|r 196 VLACTHYPLIVHVFRQLSPWPVDWLD 221 (271)
Q Consensus 196 ILGCTHyPll~~~i~~~~~~~v~iID 221 (271)
+++| |-=.+.+.+.+| +++++=
T Consensus 194 vias---~~Gi~~l~~~~P-~v~I~t 215 (243)
T 1bd3_D 194 ILAA---PQGIERVFKEYP-KVRMVT 215 (243)
T ss_dssp EEEC---HHHHHHHHHHCT-TSEEEE
T ss_pred EEEC---HHHHHHHHHHCC-CCEEEE
T ss_conf 9865---899999998797-988999
No 103
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=25.60 E-value=29 Score=13.98 Aligned_cols=204 Identities=11% Similarity=0.048 Sum_probs=85.4
Q ss_pred CCEEEEECCCC-HH--HHHHHHHHHCC--CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC
Q ss_conf 87079877910-58--99999999689--998999941578989898989999999999999862169848997176202
Q gi|254780905|r 14 NSILIFDSGIG-GL--IVLQKMRFLMP--EYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAF 88 (271)
Q Consensus 14 ~~IgifDSGiG-GL--tv~~~l~~~lP--~~~~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACNTas 88 (271)
..||+.-.+.. .+ ++.+.+.+... +.+++++ |. +.+.+.. .+.++.++.+ ++|.|++...+..
T Consensus 6 k~Ig~i~~~~~~~f~~~~~~g~~~~a~~~G~~~~~~-~~------~~d~~~q----~~~i~~~i~~-~vDgiIi~~~~~~ 73 (291)
T 3l49_A 6 KTIGITAIGTDHDWDLKAYQAQIAEIERLGGTAIAL-DA------GRNDQTQ----VSQIQTLIAQ-KPDAIIEQLGNLD 73 (291)
T ss_dssp CEEEEEESCCSSHHHHHHHHHHHHHHHHTTCEEEEE-EC------TTCHHHH----HHHHHHHHHH-CCSEEEEESSCHH
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEE-EC------CCCHHHH----HHHHHHHHHC-CCCEEEECCCCCH
T ss_conf 999999589998899999999999999749999999-38------9999999----9999999974-9999997786403
Q ss_pred HH--HHHHHHHHCCCCCCCCCC---H------------H----HHHHHHH-CCCCCEEEEECHH-----HHCCHHHHHHH
Q ss_conf 63--389998625777654454---7------------9----9999984-0788329985067-----73170168998
Q gi|254780905|r 89 TL--IKDELRSTFPSMAFLGAV---P------------A----IKQAAAY-TQSGLISILSTPA-----TLRRTYTSNLI 141 (271)
Q Consensus 89 a~--~~~~l~~~~~~ipiigii---~------------~----~~~a~~~-~~~~~VgiLAT~~-----Ti~s~~y~~~i 141 (271)
+. .++.+++. ++|++.+- | + ++..+.. ...++|+++.... ..+...|++.+
T Consensus 74 ~~~~~l~~~~~~--~IPvv~~~~~~~~~~~~v~~d~~~~G~~~a~~l~~~~~~~~~v~~~~g~~~~~~~~~R~~g~~~~~ 151 (291)
T 3l49_A 74 VLNPWLQKINDA--GIPLFTVDTATPHAINNTTSNNYSIGAELALQMVADLGGKGNVLVFNGFYSVPVCKIRYDQMKYVL 151 (291)
T ss_dssp HHHHHHHHHHHT--TCCEEEESCCCTTCSEEEEECHHHHHHHHHHHHHHHHTTCEEEEEECSCTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHC--CCCEEECCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 158999999986--993784465457888879951699999999999997499961899505666622679999999999
Q ss_pred HHCCCCCEEEECCCCCH----H----HHHHHHHH----CCC------CCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHH
Q ss_conf 51278857977056422----5----78776642----677------697999999999846541058878998056358
Q gi|254780905|r 142 HSYVSQCHIHLVSSMIL----A----SRVEEYAC----GIK------IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYP 203 (271)
Q Consensus 142 ~~~~~~~~v~~~~~~~l----v----~~iE~~~~----~~~------~~~~~~~~~l~~~l~~~~~~~~D~iILGCTHyP 203 (271)
+.+ ++..+.......+ . ..+++... ... ..+......+ +.+..... -|..|.|+--.|
T Consensus 152 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~d~~a~g~~-~al~~~g~--~dv~vvg~d~~~ 227 (291)
T 3l49_A 152 EAF-PDVKIIEPELRDVIPNTIQSAYSNVTDMLTKYPNEGDVGAIWACWDVPMIGAT-QALQAAGR--TDIRTYGVDGSP 227 (291)
T ss_dssp HTC-TTEEECSSCBCCCSSSHHHHHHHHHHHHHHHCCSTTSCCEEEESSHHHHHHHH-HHHHHTTC--CSCEEEEEECCH
T ss_pred HHC-CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHH-HHHHHHCC--CCCEEEEEECCH
T ss_conf 977-99834412310247764778999999999972146767769966878999999-99998399--985699993989
Q ss_pred HHHHHHHHHCCCCC-EEEECHHHHHHHHHHHHH
Q ss_conf 89999998648997-898285899999999986
Q gi|254780905|r 204 LIVHVFRQLSPWPV-DWLDNSDSIARRARCLLP 235 (271)
Q Consensus 204 ll~~~i~~~~~~~v-~iIDpa~~va~~~~~~L~ 235 (271)
-..+.++.--++-. .+-.+....+....+++-
T Consensus 228 ~~~~~i~~~~~~~~~tv~q~~~~~G~~a~~~l~ 260 (291)
T 3l49_A 228 EFVEMVADPESPAGAVAAQQPSEIGKLAVQNVA 260 (291)
T ss_dssp HHHHHHHCTTSCEEEEEECCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHH
T ss_conf 999999779998159995699999999999999
No 104
>3kb3_B Protein phosphatase 2C 16; phytohormone receptor, PYR/PYL/RCAR, abscisic acid signaling, type 2C protein phosphatases, PYL2, HAB1; HET: A8S; 1.95A {Arabidopsis thaliana}
Probab=25.47 E-value=16 Score=15.76 Aligned_cols=21 Identities=29% Similarity=0.365 Sum_probs=14.9
Q ss_pred EEEEECCCCHHHHHHHHHHHCC
Q ss_conf 0798779105899999999689
Q gi|254780905|r 16 ILIFDSGIGGLIVLQKMRFLMP 37 (271)
Q Consensus 16 IgifDSGiGGLtv~~~l~~~lP 37 (271)
-|||| |.||-.+.+-+.+.||
T Consensus 54 f~VfD-GhGG~~~a~~~~~~l~ 74 (321)
T 3kb3_B 54 FGVYD-GHGGHKVADYCRDRLH 74 (321)
T ss_dssp EEEEE-EESSSHHHHHHHHHHH
T ss_pred EEEEE-CCCCHHHHHHHHHHHH
T ss_conf 99996-9996799999999999
No 105
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membrane, cytoplasm, hydrolase, magnesium, manganese; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3nmv_B*
Probab=25.41 E-value=16 Score=15.75 Aligned_cols=23 Identities=30% Similarity=0.338 Sum_probs=15.3
Q ss_pred CCEEEEECCCCHHHHHHHHHHHCC
Q ss_conf 870798779105899999999689
Q gi|254780905|r 14 NSILIFDSGIGGLIVLQKMRFLMP 37 (271)
Q Consensus 14 ~~IgifDSGiGGLtv~~~l~~~lP 37 (271)
.-.|||| |.||-.+.+.+.+.++
T Consensus 53 ~~f~V~D-GhGG~~~a~~a~~~l~ 75 (316)
T 3kdj_B 53 HFFGVYD-GHGGSQVANYCRERMH 75 (316)
T ss_dssp EEEEEEE-EESSSHHHHHHHHHHH
T ss_pred EEEEEEE-CCCCHHHHHHHHHHHH
T ss_conf 6999997-9897799999999999
No 106
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=25.10 E-value=25 Score=14.41 Aligned_cols=39 Identities=21% Similarity=0.250 Sum_probs=29.8
Q ss_pred CCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf 33446348870798779105899999999689998999941
Q gi|254780905|r 6 YPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVAD 46 (271)
Q Consensus 6 ~~~~~~~~~~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D 46 (271)
.|-..+|++.|.|-=.|+.||+....|.+. ..++.-+-|
T Consensus 15 ~p~~~~m~~rI~IVGAGpaGL~~A~~Lar~--G~~V~lvE~ 53 (430)
T 3ihm_A 15 VPRGSHMKKRIGIVGAGTAGLHLGLFLRQH--DVDVTVYTD 53 (430)
T ss_dssp --------CEEEEECCHHHHHHHHHHHHHT--TCEEEEEES
T ss_pred CCCCCCCCCCEEEECCCHHHHHHHHHHHHC--CCCEEEEEC
T ss_conf 899889999989989388999999999848--998899973
No 107
>1id0_A PHOQ histidine kinase; PHOQ/PHOP, signal transduction, transferase; HET: ANP; 1.60A {Escherichia coli} SCOP: d.122.1.3 PDB: 3cgz_A 3cgy_A
Probab=24.71 E-value=30 Score=13.92 Aligned_cols=23 Identities=13% Similarity=0.141 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf 99999999999998621698489
Q gi|254780905|r 58 HALKKRLMFLFSDILDKYQPVLS 80 (271)
Q Consensus 58 ~~I~~~~~~~~~~ll~k~~~~~I 80 (271)
.++.+.+...+....++.+..+.
T Consensus 7 ~~ll~~~~~~~~~~~~~k~i~~~ 29 (152)
T 1id0_A 7 APLLDNLTSALNKVYQRKGVNIS 29 (152)
T ss_dssp HHHHHHHHHHHHHHTTTTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHCCCEEE
T ss_conf 99999999999999997897899
No 108
>2zkr_6 60S ribosomal protein L30E; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris} PDB: 1ysh_C
Probab=24.65 E-value=30 Score=13.86 Aligned_cols=38 Identities=8% Similarity=-0.039 Sum_probs=22.5
Q ss_pred HHHHHCCCCCEEEEECCCCCHHHH--HHHHHHCCCCCCCCC
Q ss_conf 998621698489971762026338--999862577765445
Q gi|254780905|r 69 SDILDKYQPVLSVIACNTAFTLIK--DELRSTFPSMAFLGA 107 (271)
Q Consensus 69 ~~ll~k~~~~~IVIACNTasa~~~--~~l~~~~~~ipiigi 107 (271)
..-+.++.++++++|+|+...... ..+-+.+ ++|++.+
T Consensus 35 ~kai~~gkaklVilA~D~~~~~~~~i~~~c~~~-~Ip~~~~ 74 (115)
T 2zkr_6 35 LKMIRQGKAKLVILANNCPALRKSEIEYYAMLA-KTGVHHY 74 (115)
T ss_dssp HHHHHHTCEEEEEEETTCCSSTTTHHHHHHHHH-TCEEEEE
T ss_pred HHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHC-CCCEEEE
T ss_conf 999981997199996889989999999999866-9997997
No 109
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, PSI, protein structure initiative; 2.40A {Salmonella typhimurium LT2}
Probab=24.40 E-value=31 Score=13.83 Aligned_cols=30 Identities=13% Similarity=0.012 Sum_probs=19.0
Q ss_pred CEEEEECCCCHHHHHHHHHHHCCCCCEEEEECC
Q ss_conf 707987791058999999996899989999415
Q gi|254780905|r 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADD 47 (271)
Q Consensus 15 ~IgifDSGiGGLtv~~~l~~~lP~~~~iY~~D~ 47 (271)
.||+.=-|.=|-.+.+.|.+.- .+ ++.-|.
T Consensus 5 kIg~IGlG~MG~~ma~~L~~~g--~~-v~v~d~ 34 (295)
T 1yb4_A 5 KLGFIGLGIMGSPMAINLARAG--HQ-LHVTTI 34 (295)
T ss_dssp EEEECCCSTTHHHHHHHHHHTT--CE-EEECCS
T ss_pred EEEEEEHHHHHHHHHHHHHHCC--CC-EEEEEC
T ss_conf 8998703788999999999779--91-799818
No 110
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, gluconate utilization, pentose shunt; HET: GLO; 1.50A {Escherichia coli k-12} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=24.31 E-value=31 Score=13.82 Aligned_cols=24 Identities=8% Similarity=-0.000 Sum_probs=17.5
Q ss_pred CCCEEEEECCCCHHHHHHHHHHHC
Q ss_conf 887079877910589999999968
Q gi|254780905|r 13 QNSILIFDSGIGGLIVLQKMRFLM 36 (271)
Q Consensus 13 ~~~IgifDSGiGGLtv~~~l~~~l 36 (271)
|..||+.==|.=|..+.+.|.+.-
T Consensus 15 K~kIG~IGLG~MG~~mA~nL~~~G 38 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRG 38 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTT
T ss_pred CCEEEEEEEHHHHHHHHHHHHHCC
T ss_conf 886999830798999999999779
No 111
>3b55_A Succinoglycan biosynthesis protein; Q81BN2, NESG, BCR135, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus cereus atcc 14579} SCOP: c.150.1.3 PDB: 2rad_A
Probab=24.30 E-value=31 Score=13.82 Aligned_cols=63 Identities=10% Similarity=-0.016 Sum_probs=48.2
Q ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHH
Q ss_conf 899999999689998999941578989898989999999999999862169848997176202633899
Q gi|254780905|r 26 LIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDE 94 (271)
Q Consensus 26 Ltv~~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACNTasa~~~~~ 94 (271)
+.=|+-|++.+-+..+|-+|..-|. ..|....-.+++.+|+++.|...|++=+.=..+..++.
T Consensus 62 ~~DL~pL~~~igdariV~LGEatHG------~~Ef~~~k~~l~r~LVee~Gf~~iA~E~d~~~~~~vn~ 124 (451)
T 3b55_A 62 LNDLKPLKNMVGSASIVGLGEATHG------AHEVFTMKHRIVKYLVSEKGFTNLVLEEGWDRALELDR 124 (451)
T ss_dssp SGGGTTHHHHHTTCSEEEEEESCTT------BHHHHHHHHHHHHHHHHHSCCCEEEEEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEECCCCC------HHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHH
T ss_conf 4678999998479829998668666------28999999999999999679988999379688899848
No 112
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=24.30 E-value=31 Score=13.82 Aligned_cols=42 Identities=7% Similarity=0.150 Sum_probs=32.6
Q ss_pred CCCCEEEEECCCCHHHHHHHHHHHCC-CCCEEEEECCCCCCCC
Q ss_conf 48870798779105899999999689-9989999415789898
Q gi|254780905|r 12 LQNSILIFDSGIGGLIVLQKMRFLMP-EYHFIYVADDVGFPYG 53 (271)
Q Consensus 12 ~~~~IgifDSGiGGLtv~~~l~~~lP-~~~~iY~~D~~~~PYG 53 (271)
-.+.|.|.=+|.+||+.++++++..+ ..+++-+-...+++|.
T Consensus 34 ~gkKVVIIGgG~AGl~aA~~l~r~~~~~~~Vtlie~~~~~~y~ 76 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFL 76 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC
T ss_conf 8982999997899999999999748998819998899977777
No 113
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1
Probab=24.28 E-value=31 Score=13.82 Aligned_cols=37 Identities=11% Similarity=0.061 Sum_probs=27.6
Q ss_pred CCCCCCCCCC-----CHHHHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 1578989898-----9899999999999998621698489971
Q gi|254780905|r 46 DDVGFPYGNW-----EDHALKKRLMFLFSDILDKYQPVLSVIA 83 (271)
Q Consensus 46 D~~~~PYG~k-----s~~~I~~~~~~~~~~ll~k~~~~~IVIA 83 (271)
++.++++|.| |.+|..+|..++-+.+ ++.+.|.+|+.
T Consensus 5 ~~~~~~~~~~~~~pfs~~E~~~R~~rl~~~m-~~~~lDalvi~ 46 (402)
T 1kp0_A 5 ZTZKYHNGZKKYTPFSZAEMTRRZBRLRAWM-AKSBIDAVLFT 46 (402)
T ss_dssp SEECCCCSCCCCCSSCHHHHHHHHHHHHHHH-HHHTCSEEEEC
T ss_pred HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH-HHCCCCEEEEC
T ss_conf 3255427775789959999999999999999-98799999879
No 114
>2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans}
Probab=24.05 E-value=31 Score=13.79 Aligned_cols=36 Identities=14% Similarity=0.394 Sum_probs=26.8
Q ss_pred CCCCCCEEEE--ECCCCHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf 6348870798--779105899999999689998999941
Q gi|254780905|r 10 KKLQNSILIF--DSGIGGLIVLQKMRFLMPEYHFIYVAD 46 (271)
Q Consensus 10 ~~~~~~Igif--DSGiGGLtv~~~l~~~lP~~~~iY~~D 46 (271)
.+|+.+|-++ -||.|==||.+.|.+.++. .+++-+|
T Consensus 1 ~pm~~~iI~i~G~sGsGKSTva~~La~~l~~-~~i~~~~ 38 (183)
T 2vli_A 1 TPMRSPIIWINGPFGVGKTHTAHTLHERLPG-SFVFEPE 38 (183)
T ss_dssp ----CCEEEEECCC----CHHHHHHHHHSTT-CEECCTH
T ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHHHHCC-CEEECHH
T ss_conf 9998808999999883499999999998399-9786568
No 115
>2qgm_A Succinoglycan biosynthesis protein; Q817Z0, NESG, X-RAY, BCR136, structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus cereus atcc 14579} SCOP: c.150.1.3
Probab=23.83 E-value=31 Score=13.76 Aligned_cols=66 Identities=5% Similarity=-0.001 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHH-HHH
Q ss_conf 589999999968999899994157898989898999999999999986216984899717620263389-998
Q gi|254780905|r 25 GLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKD-ELR 96 (271)
Q Consensus 25 GLtv~~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACNTasa~~~~-~l~ 96 (271)
++.=|+.|++.+-+..+|-+|..-|. ..|....-.+++.+|+++.|.+.|++=+.=..+..++ .++
T Consensus 60 ~~~DL~~L~~~v~darIV~LGEatHG------t~Ef~~~k~rl~r~LVee~Gf~~vAlE~~~~~~~~vn~yv~ 126 (445)
T 2qgm_A 60 PFEDLKPLKKMIGNAQYVGLGENTHG------SSEIFTMKFRLVKYLVTEMGFTNFAMEEDWGNGLKLNEYIQ 126 (445)
T ss_dssp CCGGGHHHHHHHTTCSEEEECCSSSC------BHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCCEEEEEECCCCC------HHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH
T ss_conf 85789999998479808998668767------08999999999999999769988999379588999999985
No 116
>3l6u_A ABC-type sugar transport system periplasmic component; structural genomics, nysgrc, target 11006S, PSI-2, protein structure initiative; 1.90A {Exiguobacterium sibiricum}
Probab=23.46 E-value=32 Score=13.72 Aligned_cols=81 Identities=5% Similarity=-0.032 Sum_probs=38.3
Q ss_pred CCCCEEEEECCCCH---HHHHHHHHHHCC--CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECC-
Q ss_conf 48870798779105---899999999689--998999941578989898989999999999999862169848997176-
Q gi|254780905|r 12 LQNSILIFDSGIGG---LIVLQKMRFLMP--EYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACN- 85 (271)
Q Consensus 12 ~~~~IgifDSGiGG---Ltv~~~l~~~lP--~~~~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACN- 85 (271)
-.+.||+.=+.+.- -.+++.+.+..- +.+++.+ ++ +++ .+. -.+.++.++.+ ++|.|++...
T Consensus 7 k~~~Igvi~~~~~~~f~~~~~~~i~~~a~~~Gy~~~~~-~~----~~~--~~~----~~~~i~~li~~-~~DgIii~~~~ 74 (293)
T 3l6u_A 7 KRNIVGFTIVNDKHEFAQRLINAFKAEAKANKYEALVA-TS----QNS--RIS----EREQILEFVHL-KVDAIFITTLD 74 (293)
T ss_dssp --CEEEEEESCSCSHHHHHHHHHHHHHHHHTTCEEEEE-EC----SSC--HHH----HHHHHHHHHHT-TCSEEEEECSC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEE-EC----CCC--HHH----HHHHHHHHHHC-CCCEEEEECCC
T ss_conf 99999999968999899999999999999869989999-79----999--899----99999999976-99999994332
Q ss_pred CC-CHHHHHHHHHHCCCCCCCC
Q ss_conf 20-2633899986257776544
Q gi|254780905|r 86 TA-FTLIKDELRSTFPSMAFLG 106 (271)
Q Consensus 86 Ta-sa~~~~~l~~~~~~ipiig 106 (271)
.. ...+++.+++. ++|++.
T Consensus 75 ~~~~~~~l~~~~~~--giPVV~ 94 (293)
T 3l6u_A 75 DVYIGSAIEEAKKA--GIPVFA 94 (293)
T ss_dssp TTTTHHHHHHHHHT--TCCEEE
T ss_pred CCCHHHHHHHHHHC--CCCEEE
T ss_conf 20138999999986--997997
No 117
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92, PSI-2; 2.10A {Neptuniibacter caesariensis}
Probab=23.45 E-value=32 Score=13.71 Aligned_cols=33 Identities=6% Similarity=0.086 Sum_probs=15.2
Q ss_pred HHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCC
Q ss_conf 999986216984899717620263389998625777
Q gi|254780905|r 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSM 102 (271)
Q Consensus 67 ~~~~ll~k~~~~~IVIACNTasa~~~~~l~~~~~~i 102 (271)
.+...+++.|... ..|.|.. .|++.+++.-+++
T Consensus 22 ~l~~~L~~~g~~v-~~a~~~~--~Al~~l~~~~~dl 54 (154)
T 2rjn_A 22 SLKRLIKRLGCNI-ITFTSPL--DALEALKGTSVQL 54 (154)
T ss_dssp HHHHHHHTTTCEE-EEESCHH--HHHHHHTTSCCSE
T ss_pred HHHHHHHHCCCEE-EEECCHH--HHHHHHHCCCCCE
T ss_conf 9999999879989-9989999--9999986289988
No 118
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=23.42 E-value=32 Score=13.71 Aligned_cols=14 Identities=29% Similarity=0.648 Sum_probs=8.3
Q ss_pred CCCCEEEEECCCCH
Q ss_conf 48870798779105
Q gi|254780905|r 12 LQNSILIFDSGIGG 25 (271)
Q Consensus 12 ~~~~IgifDSGiGG 25 (271)
++..|.|+|.|+|-
T Consensus 11 l~~riliLDGgmGT 24 (566)
T 1q7z_A 11 LSERVLLLDGAYGT 24 (566)
T ss_dssp HHHCCEECCCCSHH
T ss_pred HCCCEEEEECHHHH
T ss_conf 75990999898999
No 119
>3h6g_A Glutamate receptor, ionotropic kainate 2; membrane protein glycoprotein, cell junction, cell membrane, glycoprotein, ION transport; HET: NAG TLA; 2.70A {Rattus norvegicus} PDB: 3h6h_A*
Probab=23.25 E-value=32 Score=13.69 Aligned_cols=148 Identities=10% Similarity=0.094 Sum_probs=64.2
Q ss_pred HCCCCCEEE-EECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCC-------
Q ss_conf 689998999-941578989898989999999999999862169848997176202633899986257776544-------
Q gi|254780905|r 35 LMPEYHFIY-VADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLG------- 106 (271)
Q Consensus 35 ~lP~~~~iY-~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACNTasa~~~~~l~~~~~~ipiig------- 106 (271)
.+|+.++.| +.|+.- + +... -...++ .++++ ++.+||=+..+..+.+...+-+.+ ++|+|+
T Consensus 39 ~l~~~~l~~~~~~~~~---~--~~~~---a~~~~~-~l~~~-~V~aviGp~~s~~~~~v~~~~~~~-~iP~Is~~~~~~~ 107 (395)
T 3h6g_A 39 LLPNTTLTYDTQKINL---Y--DSFE---ASKKAC-DQLSL-GVAAIFGPSHSSSANAVQSICNAL-GVPHIQTRWKHQV 107 (395)
T ss_dssp SSSSEEEEEEEEEEET---T--CHHH---HHHHHH-HHHHH-CCSCEECCSSHHHHHHHHHHHHHT-TCCEEECSCCCCC
T ss_pred CCCCCEEEEEEEECCC---C--CHHH---HHHHHH-HHHHC-CCEEEECCCCCHHHHHHHHHHHHC-CEEEEECCCCCCC
T ss_conf 8999679999983677---8--9999---999999-98866-976999889828899999998633-4667404678733
Q ss_pred ----------CCH-------HHHHHHHHCCCCCEEEEECHHHHCCHHHHHHHHHC-CCCCEEEECCCCCHHHHHHHHHHC
Q ss_conf ----------547-------99999984078832998506773170168998512-788579770564225787766426
Q gi|254780905|r 107 ----------AVP-------AIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSY-VSQCHIHLVSSMILASRVEEYACG 168 (271)
Q Consensus 107 ----------ii~-------~~~~a~~~~~~~~VgiLAT~~Ti~s~~y~~~i~~~-~~~~~v~~~~~~~lv~~iE~~~~~ 168 (271)
+.| ++...+...+.++|+|+....--.+. .++.+... ..+..+....-
T Consensus 108 ~~~~~~~~~r~~p~~~~~~~~~~~~l~~~~w~~vaii~d~~~~~~~-~~~~~~~~~~~~~~v~~~~~------------- 173 (395)
T 3h6g_A 108 SDNKDSFYVSLYPDFSSLSRAILDLVQFFKWKTVTVVYDDSTGLIR-LQELIKAPSRYNLRLKIRQL------------- 173 (395)
T ss_dssp TTCCCCSEEEEEECHHHHHHHHHHHHHHTTCSEEEEEESSTHHHHH-THHHHTGGGTSSCEEEEEEC-------------
T ss_pred CCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHH-HHHHHHHHHHCCCEEEEEEE-------------
T ss_conf 3567973999965879999999998762354379999931310257-78999999854660489982-------------
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHC
Q ss_conf 776979999999998465410588789980563588999999864
Q gi|254780905|r 169 IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213 (271)
Q Consensus 169 ~~~~~~~~~~~l~~~l~~~~~~~~D~iILGCTHyPll~~~i~~~~ 213 (271)
.......+. .+..++..+.+.+++.| .++.....+++..
T Consensus 174 -~~~~~~~~~----~l~~~~~~~~~~vv~~~-~~~~~~~~l~~a~ 212 (395)
T 3h6g_A 174 -PADTKDAKP----LLKEMKRGKEFHVIFDC-SHEMAAGILKQAL 212 (395)
T ss_dssp -CSSGGGGHH----HHHHHHHTTCCEEEEES-CHHHHHHHHHHHH
T ss_pred -CCCCHHHHH----HHHHHHCCCCCEEEEEE-CHHHHHHHHHHHH
T ss_conf -366215899----99875445885699981-5599999999999
No 120
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.00A {Bacillus cereus atcc 14579}
Probab=22.95 E-value=33 Score=13.65 Aligned_cols=24 Identities=17% Similarity=0.202 Sum_probs=17.1
Q ss_pred CCCCEEEEECCCCHHHHHHHHHHH
Q ss_conf 488707987791058999999996
Q gi|254780905|r 12 LQNSILIFDSGIGGLIVLQKMRFL 35 (271)
Q Consensus 12 ~~~~IgifDSGiGGLtv~~~l~~~ 35 (271)
|+..||+.=.|-=|-++++.+.+.
T Consensus 1 M~kkI~fIG~G~mg~ai~~gl~~~ 24 (247)
T 3gt0_A 1 MDKQIGFIGCGNMGMAMIGGMINK 24 (247)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC
T ss_conf 998299985769999999999977
No 121
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}
Probab=22.76 E-value=19 Score=15.26 Aligned_cols=22 Identities=18% Similarity=0.199 Sum_probs=16.6
Q ss_pred CEEEEECCCCHHHHHHHHHHHCC
Q ss_conf 70798779105899999999689
Q gi|254780905|r 15 SILIFDSGIGGLIVLQKMRFLMP 37 (271)
Q Consensus 15 ~IgifDSGiGGLtv~~~l~~~lP 37 (271)
-.|||| |.||-.+.+.+.+.++
T Consensus 57 lf~VfD-GhGG~~~a~~a~~~l~ 78 (307)
T 2p8e_A 57 FFAVYD-GHAGSRVANYCSTHLL 78 (307)
T ss_dssp EEEEEE-EESCSHHHHHHHHHHH
T ss_pred EEEEEE-CCCCHHHHHHHHHHHH
T ss_conf 999996-9986799999999999
No 122
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=22.53 E-value=12 Score=16.56 Aligned_cols=110 Identities=10% Similarity=0.121 Sum_probs=52.3
Q ss_pred CEEEEECCCC--HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHH-HHHHHHHHHHHCCCCCEEEEECCCCCHH-
Q ss_conf 7079877910--58999999996899989999415789898989899999-9999999986216984899717620263-
Q gi|254780905|r 15 SILIFDSGIG--GLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK-RLMFLFSDILDKYQPVLSVIACNTAFTL- 90 (271)
Q Consensus 15 ~IgifDSGiG--GLtv~~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~I~~-~~~~~~~~ll~k~~~~~IVIACNTasa~- 90 (271)
.|||. |.| |-.......+..|+.+++.+.|.-. ++..+.-.. .+..-.+.+++...+|+|+|+..+.+..
T Consensus 7 rvgii--G~G~~g~~~h~~~~~~~~~~~ivav~d~~~----~~a~~~~~~~~~~~~~~ell~~~~iDaV~I~tp~~~H~~ 80 (362)
T 3fhl_A 7 KTGLA--AFGMSGQVFHAPFISTNPHFELYKIVERSK----ELSKERYPQASIVRSFKELTEDPEIDLIVVNTPDNTHYE 80 (362)
T ss_dssp EEEES--CCSHHHHHTTHHHHHHCTTEEEEEEECSSC----CGGGTTCTTSEEESCSHHHHTCTTCCEEEECSCGGGHHH
T ss_pred EEEEE--CCCHHHHHHHHHHHHHCCCCEEEEEECCCH----HHHHHHCCCCCCCCCHHHHHCCCCCCEEEECCCCHHHHH
T ss_conf 99999--368999999999998398929999984999----999976789984399999964999988999489478899
Q ss_pred -HHHHHHHH---CCCCCCCCCCHHHHHHHH-HCCCCCEEEEECHH
Q ss_conf -38999862---577765445479999998-40788329985067
Q gi|254780905|r 91 -IKDELRST---FPSMAFLGAVPAIKQAAA-YTQSGLISILSTPA 130 (271)
Q Consensus 91 -~~~~l~~~---~~~ipiigii~~~~~a~~-~~~~~~VgiLAT~~ 130 (271)
+...++.. +...|+---++.++..+. ..+.+.....+-..
T Consensus 81 ~~~~al~aGkhV~~EKPla~~~~ea~~l~~~a~~~~~~~~v~~~~ 125 (362)
T 3fhl_A 81 YAGMALEAGKNVVVEKPFTSTTKQGEELIALAKKKGLMLSVYQNR 125 (362)
T ss_dssp HHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECGG
T ss_pred HHHHHHHCCCCCHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEE
T ss_conf 999999749975102875312221115778876325221110121
No 123
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=22.23 E-value=34 Score=13.56 Aligned_cols=102 Identities=11% Similarity=0.004 Sum_probs=56.7
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCH--------------HHHHHHH
Q ss_conf 89898989999999999999862169848997176202633899986257776544547--------------9999998
Q gi|254780905|r 51 PYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP--------------AIKQAAA 116 (271)
Q Consensus 51 PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACNTasa~~~~~l~~~~~~ipiigii~--------------~~~~a~~ 116 (271)
+-++.+-.+........+.+++.+..+|+|++-=-|.++++.-.. +.+.++|++++.- ..+.++.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~il~~~kpD~Vlv~GDr~~~la~a~a-a~~~~ipi~HiegG~rsg~~~~~~~ee~~R~~i~ 144 (376)
T 1v4v_A 66 MQERQALPDLAARILPQAARALKEMGADYVLVHGDTLTTFAVAWA-AFLEGIPVGHVEAGLRSGNLKEPFPEEANRRLTD 144 (376)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHHHHTTCSEEEEESSCHHHHHHHHH-HHHTTCCEEEETCCCCCSCTTSSTTHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHH-HHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHCC
T ss_conf 888888999999999999999740599989996897079999999-9862974798661766666676634665622214
Q ss_pred HCCCCCEEEEECHHHHCCHHHHHHHHHCCCCCEEEECCCCCHHH
Q ss_conf 40788329985067731701689985127885797705642257
Q gi|254780905|r 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILAS 160 (271)
Q Consensus 117 ~~~~~~VgiLAT~~Ti~s~~y~~~i~~~~~~~~v~~~~~~~lv~ 160 (271)
+-.++-.-+|+. .++++++.--....|+..++|.+-.
T Consensus 145 --~ls~~hf~~~~~-----~~~~L~~~G~~~~~I~~vG~p~iD~ 181 (376)
T 1v4v_A 145 --VLTDLDFAPTPL-----AKANLLKEGKREEGILVTGQTGVDA 181 (376)
T ss_dssp --HHCSEEEESSHH-----HHHHHHTTTCCGGGEEECCCHHHHH
T ss_pred --CCCCEEEECCHH-----HHHHHHHCCCCCCEEEEECCCHHHH
T ss_conf --334177626688-----9999986066776299817624888
No 124
>2fn9_A Ribose ABC transporter, periplasmic ribose- binding protein; RBP, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima MSB8} PDB: 2fn8_A*
Probab=22.20 E-value=34 Score=13.55 Aligned_cols=207 Identities=10% Similarity=0.013 Sum_probs=86.7
Q ss_pred CCCCEEEEECCCC-HH--HHHHHHHHHCC--CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
Q ss_conf 4887079877910-58--99999999689--9989999415789898989899999999999998621698489971762
Q gi|254780905|r 12 LQNSILIFDSGIG-GL--IVLQKMRFLMP--EYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNT 86 (271)
Q Consensus 12 ~~~~IgifDSGiG-GL--tv~~~l~~~lP--~~~~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACNT 86 (271)
|+..|||.=..++ .+ .+.+.+.+..- +.+++++ ++. .+.+.. .+.++.++.+ +++.|++....
T Consensus 1 ~~g~Igvvvp~~~~~f~~~~~~gi~~~a~~~g~~~~~~-~~~------~~~~~~----~~~i~~l~~~-~vdgii~~~~~ 68 (290)
T 2fn9_A 1 MKGKMAIVISTLNNPWFVVLAETAKQRAEQLGYEATIF-DSQ------NDTAKE----SAHFDAIIAA-GYDAIIFNPTD 68 (290)
T ss_dssp --CEEEEEESCSSSHHHHHHHHHHHHHHHHTTCEEEEE-ECT------TCHHHH----HHHHHHHHHT-TCSEEEECCSC
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEE-ECC------CCHHHH----HHHHHHHHHC-CCCEEEECCCC
T ss_conf 98989999288989999999999999999869989999-699------998999----9999999974-99855301333
Q ss_pred CC--HHHHHHHHHHCCCCCCCCC-------------C--H---HHHHHH----HH-------CCCCCEEEEEC----HHH
Q ss_conf 02--6338999862577765445-------------4--7---999999----84-------07883299850----677
Q gi|254780905|r 87 AF--TLIKDELRSTFPSMAFLGA-------------V--P---AIKQAA----AY-------TQSGLISILST----PAT 131 (271)
Q Consensus 87 as--a~~~~~l~~~~~~ipiigi-------------i--~---~~~~a~----~~-------~~~~~VgiLAT----~~T 131 (271)
.. ...++.+++. ++|++.+ + + +.+.+. .. ....+++.+.- +.+
T Consensus 69 ~~~~~~~l~~~~~~--gipvV~~~~~~~~~~~~~~~V~~d~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 146 (290)
T 2fn9_A 69 ADGSIANVKRAKEA--GIPVFCVDRGINARGLAVAQIYSDNYYGGVLAGEYFVKFLKEKYPDAKEIPYAELLGILSAQPT 146 (290)
T ss_dssp TTTTHHHHHHHHHT--TCCEEEESSCCSCSSSSSEEEEECHHHHHHHHHHHHHHHHHHHCSSCSCEEEEEEECCTTCHHH
T ss_pred CCCCHHHHHHHHHC--CCEEEEECCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHH
T ss_conf 21108999999856--9839996577655677776796068999999999999864101443555424542278887247
Q ss_pred H-CCHHHHHHHHHCCCCCEEEECCCCCHH----HHHHHHHH-CCC-----CCHHHHHHHHHHHHHHHHCCCCCEEEECCC
Q ss_conf 3-170168998512788579770564225----78776642-677-----697999999999846541058878998056
Q gi|254780905|r 132 L-RRTYTSNLIHSYVSQCHIHLVSSMILA----SRVEEYAC-GIK-----IKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200 (271)
Q Consensus 132 i-~s~~y~~~i~~~~~~~~v~~~~~~~lv----~~iE~~~~-~~~-----~~~~~~~~~l~~~l~~~~~~~~D~iILGCT 200 (271)
. +...|++.+.............+..-. ..+..... ... ...+..-..+-..+.....+ |..|.|+-
T Consensus 147 ~~r~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ai~~~~d~~a~g~~~al~~~g~~--~i~i~g~d 224 (290)
T 2fn9_A 147 WDRSNGFHSVVDQYPEFKMVAQQSAEFDRDTAYKVTEQILQAHPEIKAIWCGNDAMALGAMKACEAAGRT--DIYIFGFD 224 (290)
T ss_dssp HHHHHHHHHHHTTSTTEEEEEEEECTTCHHHHHHHHHHHHHHCTTCCEEEESSHHHHHHHHHHHHHTTCT--TCEEECCB
T ss_pred HHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCC--CCEEECCC
T ss_conf 8899889999974256663012215678889888999998624464499987829999999999984997--67460667
Q ss_pred CHHHHHHHHHHHCCCCCEEEE-CHHHHHHHHHHHHH
Q ss_conf 358899999986489978982-85899999999986
Q gi|254780905|r 201 HYPLIVHVFRQLSPWPVDWLD-NSDSIARRARCLLP 235 (271)
Q Consensus 201 HyPll~~~i~~~~~~~v~iID-pa~~va~~~~~~L~ 235 (271)
=.|-..+.++.--+ .+..|+ +.+..+++..++|-
T Consensus 225 ~~~~~~~~i~~g~~-~~~ti~q~~~~~G~~av~~l~ 259 (290)
T 2fn9_A 225 GAEDVINAIKEGKQ-IVATIMQFPKLMARLAVEWAD 259 (290)
T ss_dssp CCHHHHHHHHTTCS-EEEEEECCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHCCCC-CEEEEECCHHHHHHHHHHHHH
T ss_conf 97999999980998-669984499999999999999
No 125
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1
Probab=22.09 E-value=34 Score=13.54 Aligned_cols=64 Identities=11% Similarity=0.101 Sum_probs=38.5
Q ss_pred CCCCCCCCCCCCCEEEEECCCCHH-HHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 554334463488707987791058-9999999968999899994157898989898999999999999986216984899
Q gi|254780905|r 3 IDNYPCEKKLQNSILIFDSGIGGL-IVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSV 81 (271)
Q Consensus 3 ~~~~~~~~~~~~~IgifDSGiGGL-tv~~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IV 81 (271)
..|+..+++|+ |||.|=+ |-+ |++++|.+. ..+.+...| +++ ++ .+|.+|
T Consensus 15 ~~~~~~~~~mk--igvl~~~-Gn~~s~~~AL~~l--G~~~~iv~~----------~~~------------l~--~~D~lI 65 (219)
T 1q7r_A 15 TENLYFQSNMK--IGVLGLQ-GAVREHVRAIEAC--GAEAVIVKK----------SEQ------------LE--GLDGLV 65 (219)
T ss_dssp ---CCCCCCCE--EEEESCG-GGCHHHHHHHHHT--TCEEEEECS----------GGG------------GT--TCSEEE
T ss_pred CCCCCCCCCCE--EEEEECC-CCHHHHHHHHHHC--CCCEEEECC----------HHH------------HH--CCCEEE
T ss_conf 42100226977--9999658-8399999999987--996999899----------899------------82--499999
Q ss_pred EECCCCCHHHHHHHH
Q ss_conf 717620263389998
Q gi|254780905|r 82 IACNTAFTLIKDELR 96 (271)
Q Consensus 82 IACNTasa~~~~~l~ 96 (271)
++= .++..+.+.++
T Consensus 66 LPG-G~~~~~~~~l~ 79 (219)
T 1q7r_A 66 LPG-GESTTMRRLID 79 (219)
T ss_dssp ECC-CCHHHHHHHHH
T ss_pred ECC-CCHHHHHHHHH
T ss_conf 999-98799999865
No 126
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genomics, protein structure initiative, PSI; HET: NAD; 1.95A {Listeria innocua}
Probab=21.94 E-value=34 Score=13.52 Aligned_cols=69 Identities=16% Similarity=0.195 Sum_probs=39.0
Q ss_pred CCCC-CEEEEECCCCHH--HHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHH-HHHH---HHHHHHHHHHCCCCCEEEEE
Q ss_conf 3488-707987791058--999999996899989999415789898989899-9999---99999998621698489971
Q gi|254780905|r 11 KLQN-SILIFDSGIGGL--IVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHA-LKKR---LMFLFSDILDKYQPVLSVIA 83 (271)
Q Consensus 11 ~~~~-~IgifDSGiGGL--tv~~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~-I~~~---~~~~~~~ll~k~~~~~IVIA 83 (271)
.|++ .|||. |.|+. .-++.+ +..|+.+++.+.|.-- +..+ ..++ ...-.+.+++...+|+|+|+
T Consensus 2 ~mk~~rigiI--G~G~~g~~h~~~~-~~~~~~~l~av~d~~~------~~~~~~~~~~~~~~~~~~ell~~~~iD~V~i~ 72 (359)
T 3e18_A 2 SLKKYQLVIV--GYGGMGSYHVTLA-SAADNLEVHGVFDILA------EKREAAAQKGLKIYESYEAVLADEKVDAVLIA 72 (359)
T ss_dssp -CCCEEEEEE--CCSHHHHHHHHHH-HTSTTEEEEEEECSSH------HHHHHHHTTTCCBCSCHHHHHHCTTCCEEEEC
T ss_pred CCCCCCEEEE--CCCHHHHHHHHHH-HHCCCCEEEEEECCCH------HHHHHHHHCCCCCCCCHHHHHCCCCCCEEEEC
T ss_conf 9887719999--4679999999999-8589958999988999------99999986299701999999559998989987
Q ss_pred CCCCC
Q ss_conf 76202
Q gi|254780905|r 84 CNTAF 88 (271)
Q Consensus 84 CNTas 88 (271)
..+.+
T Consensus 73 tp~~~ 77 (359)
T 3e18_A 73 TPNDS 77 (359)
T ss_dssp SCGGG
T ss_pred CCCHH
T ss_conf 88055
No 127
>3c7t_A Ecdysteroid-phosphate phosphatase; ecdysone, 2H-phosphatase, PGM, hydrolase; 1.76A {Bombyx mori}
Probab=21.92 E-value=34 Score=13.52 Aligned_cols=21 Identities=14% Similarity=0.044 Sum_probs=16.7
Q ss_pred EEECCCCHHHHHHHHHHHCCC
Q ss_conf 998056358899999986489
Q gi|254780905|r 195 IVLACTHYPLIVHVFRQLSPW 215 (271)
Q Consensus 195 iILGCTHyPll~~~i~~~~~~ 215 (271)
-||=+||=-.+.-.+..+++-
T Consensus 186 ~IlIVsHg~~i~~l~~~llgl 206 (263)
T 3c7t_A 186 NVIFIGHAITLDQMVGALHRL 206 (263)
T ss_dssp CEEEEECHHHHHHHHHHHHTT
T ss_pred EEEEEECHHHHHHHHHHHHCC
T ss_conf 299996889999999998299
No 128
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=21.63 E-value=26 Score=14.28 Aligned_cols=13 Identities=46% Similarity=0.777 Sum_probs=11.2
Q ss_pred CEEEEECCCCHHHH
Q ss_conf 70798779105899
Q gi|254780905|r 15 SILIFDSGIGGLIV 28 (271)
Q Consensus 15 ~IgifDSGiGGLtv 28 (271)
-|-+| ||+|||+.
T Consensus 91 vidLF-aG~GGl~~ 103 (482)
T 3me5_A 91 FIDLF-AGIGGIRR 103 (482)
T ss_dssp EEEES-CTTSHHHH
T ss_pred EEEEC-CCCCHHHH
T ss_conf 89979-27087999
No 129
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=21.62 E-value=35 Score=13.48 Aligned_cols=34 Identities=15% Similarity=0.069 Sum_probs=15.3
Q ss_pred HHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCC
Q ss_conf 9999986216984899717620263389998625777
Q gi|254780905|r 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSM 102 (271)
Q Consensus 66 ~~~~~ll~k~~~~~IVIACNTasa~~~~~l~~~~~~i 102 (271)
+.+..++++.|.. |..|+++. .++..+++.-+++
T Consensus 17 ~~l~~~L~~~g~~--v~~a~~~~-~al~~l~~~~~dl 50 (155)
T 1qkk_A 17 KAMQQTLELAGFT--VSSFASAT-EALAGLSADFAGI 50 (155)
T ss_dssp HHHHHHHHHTTCE--EEEESCHH-HHHHTCCTTCCSE
T ss_pred HHHHHHHHHCCCE--EEEECCHH-HHHHHHHCCCCCE
T ss_conf 9999999987998--99978999-9999853269877
No 130
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=21.54 E-value=35 Score=13.47 Aligned_cols=69 Identities=9% Similarity=0.133 Sum_probs=42.5
Q ss_pred HHHHHHHCCCCCEEEEECCCCCCCCCC--CHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCC
Q ss_conf 999999689998999941578989898--989999999999999862169848997176202633899986257776544
Q gi|254780905|r 29 LQKMRFLMPEYHFIYVADDVGFPYGNW--EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLG 106 (271)
Q Consensus 29 ~~~l~~~lP~~~~iY~~D~~~~PYG~k--s~~~I~~~~~~~~~~ll~k~~~~~IVIACNTasa~~~~~l~~~~~~ipiig 106 (271)
.+..++-.|+.-+ ++| +|||.- |.++..+ ...++++ .|+++|-+.++.-..-..+.|.+. +||+.|
T Consensus 69 ~~aV~rga~~~~i--i~D---mPf~sy~~~~~~~~~----~A~~l~~-~gadavk~eg~~~~~~~i~~l~~~--gIPV~g 136 (275)
T 1o66_A 69 TECVARGAKNAMI--VSD---LPFGAYQQSKEQAFA----AAAELMA-AGAHMVKLEGGVWMAETTEFLQMR--GIPVCA 136 (275)
T ss_dssp HHHHHHHCSSSEE--EEE---CCTTSSSSCHHHHHH----HHHHHHH-TTCSEEEEECSGGGHHHHHHHHHT--TCCEEE
T ss_pred HHHHHCCCCCCEE--EEC---CCHHHCCCHHHHHHH----HHHHHHH-CCCCCEECCCHHHHHHHHHHHHHC--CCCEEE
T ss_conf 9999704877138--946---770102253999999----9999986-485511325506589999999987--996687
Q ss_pred ---CCH
Q ss_conf ---547
Q gi|254780905|r 107 ---AVP 109 (271)
Q Consensus 107 ---ii~ 109 (271)
..|
T Consensus 137 HiGL~P 142 (275)
T 1o66_A 137 HIGLTP 142 (275)
T ss_dssp EEESCG
T ss_pred ECCCCC
T ss_conf 404675
No 131
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3n4z_A 2bo1_A
Probab=21.27 E-value=35 Score=13.43 Aligned_cols=57 Identities=12% Similarity=0.132 Sum_probs=28.9
Q ss_pred HHHHCCCCCEEEEECCCCCHHHHHHHHH--HCCCCCCCCCC-HHHHHHHHHCCCCCEEEEE
Q ss_conf 9862169848997176202633899986--25777654454-7999999840788329985
Q gi|254780905|r 70 DILDKYQPVLSVIACNTAFTLIKDELRS--TFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127 (271)
Q Consensus 70 ~ll~k~~~~~IVIACNTasa~~~~~l~~--~~~~ipiigii-~~~~~a~~~~~~~~VgiLA 127 (271)
+-+.++.++++++|.|+.. .....++. ...++|++... .--+......+..++.++|
T Consensus 26 kai~~gkaklViiA~D~~~-~~~~~i~~~c~~~~Vp~~~~~~s~~eLG~a~Gk~~~vs~v~ 85 (101)
T 1w41_A 26 QYAKMGGAKLIIVARNARP-DIKEDIEYYARLSGIPVYEFEGTSVELGTLLGRPHTVSALA 85 (101)
T ss_dssp HHHHHTCCSEEEEETTSCH-HHHHHHHHHHHHHTCCEEEESSCHHHHHHHTTCSSCCCEEE
T ss_pred HHHHCCCCEEEEEECCCCH-HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCEEEEE
T ss_conf 9998398529999798998-99999999998359975998189999999878988779999
No 132
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=21.12 E-value=27 Score=14.18 Aligned_cols=73 Identities=14% Similarity=0.011 Sum_probs=39.0
Q ss_pred HHHHHHHCCC-----CCEEEEECCCC-CCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC----CHHHHHHHHHH
Q ss_conf 9999996899-----98999941578-98989898999999999999986216984899717620----26338999862
Q gi|254780905|r 29 LQKMRFLMPE-----YHFIYVADDVG-FPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA----FTLIKDELRST 98 (271)
Q Consensus 29 ~~~l~~~lP~-----~~~iY~~D~~~-~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACNTa----sa~~~~~l~~~ 98 (271)
..++...+|+ ..-+.+.+..+ .+=.+.++++..+....+-+ .++. .+-|||..-|- |+.+++..-+.
T Consensus 51 ~~~ll~~~p~l~~~~~~~~~v~~~~~lidS~~m~p~~w~~la~~i~~-~~~~--~dGvVVtHGTDTleeTA~~L~~~l~~ 127 (358)
T 2him_A 51 LQRQLALMPEFHRPEMPDFTIHEYTPLMDSSDMTPEDWQHIAEDIKA-HYDD--YDGFVILHGTDTMAYTASALSFMLEN 127 (358)
T ss_dssp HHHHHTTCGGGGSTTSCEEEEEEEEEEECGGGCCHHHHHHHHHHHHH-HGGG--CSEEEEECCSTTHHHHHHHHHHHEET
T ss_pred HHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHH-HHCC--CCCEEEECCCCHHHHHHHHHHHHHHC
T ss_conf 99999738343545567448887146678310899999999999998-5236--99789975863699999999998647
Q ss_pred CCCCCCC
Q ss_conf 5777654
Q gi|254780905|r 99 FPSMAFL 105 (271)
Q Consensus 99 ~~~ipii 105 (271)
. +.||+
T Consensus 128 ~-~kPVV 133 (358)
T 2him_A 128 L-GKPVI 133 (358)
T ss_dssp C-CSCEE
T ss_pred C-CCCEE
T ss_conf 8-98569
No 133
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}
Probab=21.07 E-value=24 Score=14.49 Aligned_cols=21 Identities=24% Similarity=0.368 Sum_probs=13.7
Q ss_pred EEEEECCCCHHHHHHHHHHHCC
Q ss_conf 0798779105899999999689
Q gi|254780905|r 16 ILIFDSGIGGLIVLQKMRFLMP 37 (271)
Q Consensus 16 IgifDSGiGGLtv~~~l~~~lP 37 (271)
.|||| |+||-.+-+-+.+.++
T Consensus 38 ~~V~D-GhGG~~~a~~as~~l~ 58 (274)
T 2iq1_A 38 FAVYD-GHGGPAAADFCHTHME 58 (274)
T ss_dssp EEEEE-EESSTHHHHHHHHHHH
T ss_pred EEEEE-CCCCHHHHHHHHHHHH
T ss_conf 99996-9999699999999999
No 134
>3crn_A Response regulator receiver domain protein, CHEY- like; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=20.81 E-value=36 Score=13.37 Aligned_cols=38 Identities=16% Similarity=0.098 Sum_probs=19.8
Q ss_pred HHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCC
Q ss_conf 99999986216984899717620263389998625777654
Q gi|254780905|r 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL 105 (271)
Q Consensus 65 ~~~~~~ll~k~~~~~IVIACNTasa~~~~~l~~~~~~ipii 105 (271)
.+.+..++++.|.+. ..|+|-. -+++.+++.-+++-++
T Consensus 16 ~~~l~~~L~~~g~~v-~~a~~~~--~al~~l~~~~~dlvll 53 (132)
T 3crn_A 16 LDSTKQILEFEGYEV-EIAATAG--EGLAKIENEFFNLALF 53 (132)
T ss_dssp HHHHHHHHHHTTCEE-EEESSHH--HHHHHHHHSCCSEEEE
T ss_pred HHHHHHHHHHCCCEE-EECCCHH--HHHHHHHHCCCCEEEE
T ss_conf 999999999869979-9709999--9999998579999997
No 135
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase family, NAD-binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum ms-1}
Probab=20.53 E-value=36 Score=13.33 Aligned_cols=68 Identities=12% Similarity=0.103 Sum_probs=38.3
Q ss_pred CEEEEECCCC--HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC
Q ss_conf 7079877910--5899999999689998999941578989898989999999999999862169848997176202
Q gi|254780905|r 15 SILIFDSGIG--GLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAF 88 (271)
Q Consensus 15 ~IgifDSGiG--GLtv~~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACNTas 88 (271)
.|||. |.| |...++.++ .+|..+++.+.|.-.-..-... .+. . +..-.+.+++...+|+|+|++...+
T Consensus 12 rv~ii--G~G~~g~~h~~~~~-~~~~~eiv~v~d~~~~~~~~~~-~~~-~-~~~~~~ell~~~~~D~V~I~tp~~~ 81 (315)
T 3c1a_A 12 RLALI--GAGRWGKNYIRTIA-GLPGAALVRLASSNPDNLALVP-PGC-V-IESDWRSVVSAPEVEAVIIATPPAT 81 (315)
T ss_dssp EEEEE--ECTTTTTTHHHHHH-HCTTEEEEEEEESCHHHHTTCC-TTC-E-EESSTHHHHTCTTCCEEEEESCGGG
T ss_pred EEEEE--CCCHHHHHHHHHHH-HCCCCEEEEEECCCHHHHHHHC-CCC-C-CCCCHHHHHCCCCCCEEEECCCHHH
T ss_conf 89999--99399999999997-1899489999879999999753-579-7-3599999955999998999287888
No 136
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A*
Probab=20.52 E-value=36 Score=13.33 Aligned_cols=28 Identities=21% Similarity=0.409 Sum_probs=22.9
Q ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHCC
Q ss_conf 6348870798779105899999999689
Q gi|254780905|r 10 KKLQNSILIFDSGIGGLIVLQKMRFLMP 37 (271)
Q Consensus 10 ~~~~~~IgifDSGiGGLtv~~~l~~~lP 37 (271)
.++++.|.|.=+|+.||+..++|.+.-.
T Consensus 104 ~~~~~kVvVIGAGiAGLsAA~~L~~~G~ 131 (662)
T 2z3y_A 104 TKKTGKVIIIGSGVSGLAAARQLQSFGM 131 (662)
T ss_dssp SSCCCEEEEECCBHHHHHHHHHHHHTTC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCC
T ss_conf 8999969998978899999999987799
No 137
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesis; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A*
Probab=20.28 E-value=37 Score=13.30 Aligned_cols=22 Identities=23% Similarity=0.434 Sum_probs=19.5
Q ss_pred CCEEEEECCCCHHHHHHHHHHH
Q ss_conf 8707987791058999999996
Q gi|254780905|r 14 NSILIFDSGIGGLIVLQKMRFL 35 (271)
Q Consensus 14 ~~IgifDSGiGGLtv~~~l~~~ 35 (271)
..|.|.=+|+.|||....|.++
T Consensus 4 kki~IIGaG~sGL~~A~~L~k~ 25 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEK 25 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT
T ss_pred CCEEEECCCHHHHHHHHHHHHC
T ss_conf 8699989619999999999848
No 138
>2b4a_A BH3024; 10175646, structural genomics, joint center for structural genomics, JCSG, protein structure initiative PSI, unknown function; 2.42A {Bacillus halodurans c-125} SCOP: c.23.1.1
Probab=20.25 E-value=37 Score=13.29 Aligned_cols=64 Identities=9% Similarity=0.088 Sum_probs=28.3
Q ss_pred CHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH-HCCCC
Q ss_conf 05899999999689998999941578989898989999999999999862169848997176202633899986-25777
Q gi|254780905|r 24 GGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRS-TFPSM 102 (271)
Q Consensus 24 GGLtv~~~l~~~lP~~~~iY~~D~~~~PYG~ks~~~I~~~~~~~~~~ll~k~~~~~IVIACNTasa~~~~~l~~-~~~~i 102 (271)
|+-.+..... .+....++-+=|. +. ..+.+...+++.|... ..|.++. .+++.+.+ ..+++
T Consensus 2 ~~d~~~~~~~-~m~~~rILvVDDd----------~~----~~~~l~~~L~~~G~~v--~~~~~g~-~al~~l~~~~~~Dl 63 (138)
T 2b4a_A 2 GSDKIHHHHH-HMQPFRVTLVEDE----------PS----HATLIQYHLNQLGAEV--TVHPSGS-AFFQHRSQLSTCDL 63 (138)
T ss_dssp -------------CCCEEEEECSC----------HH----HHHHHHHHHHHTTCEE--EEESSHH-HHHHTGGGGGSCSE
T ss_pred CCCCCCCCCC-CCCCCEEEEEECC----------HH----HHHHHHHHHHHCCCEE--EEECCHH-HHHHHHHHCCCCCE
T ss_conf 9654453425-7678889999699----------99----9999999999859979--9809999-99999983699988
Q ss_pred CCC
Q ss_conf 654
Q gi|254780905|r 103 AFL 105 (271)
Q Consensus 103 pii 105 (271)
-++
T Consensus 64 vil 66 (138)
T 2b4a_A 64 LIV 66 (138)
T ss_dssp EEE
T ss_pred EEE
T ss_conf 998
No 139
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, signal transductuin, X-RAY crystallography, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A
Probab=20.21 E-value=23 Score=14.70 Aligned_cols=23 Identities=17% Similarity=0.195 Sum_probs=17.7
Q ss_pred CEEEEECCCCHHHHHHHHHHHCCC
Q ss_conf 707987791058999999996899
Q gi|254780905|r 15 SILIFDSGIGGLIVLQKMRFLMPE 38 (271)
Q Consensus 15 ~IgifDSGiGGLtv~~~l~~~lP~ 38 (271)
-.|||| |.||-.+.+.+.++++.
T Consensus 55 ~fgVfD-GHGG~~aa~~~~~~l~~ 77 (382)
T 1a6q_A 55 FFAVYD-GHAGSQVAKYCCEHLLD 77 (382)
T ss_dssp EEEEEE-EESCSHHHHHHHHHHHH
T ss_pred EEEEEE-CCCCHHHHHHHHHHHHH
T ss_conf 999996-99986999999999999
Done!