HHSEARCH alignment of GI: 254780905 and SCOP domain: d1jfla1

Alignment
>d1jfla1 c.78.2.1 (A:1-115) Aspartate racemase {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=98.65  E-value=3.3e-08  Score=71.90  Aligned_cols=94  Identities=17%  Similarity=0.389  Sum_probs=59.7

Q ss_pred             CEEEEECCCCH---HHHHHHHHHHCCCC------C-EEEEECCCCCCC------CCCCHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             70798779105---89999999968999------8-999941578989------89898999999999999986216984
Q gi|254780905|r   15 SILIFDSGIGG---LIVLQKMRFLMPEY------H-FIYVADDVGFPY------GNWEDHALKKRLMFLFSDILDKYQPV   78 (271)
Q Consensus        15 ~IgifDSGiGG---Ltv~~~l~~~lP~~------~-~iY~~D~~~~PY------G~ks~~~I~~~~~~~~~~ll~k~~~~   78 (271)
                      .|||. .|+|-   +..+++|.+..+..      + ++|-  ..++|-      |++.  +......+.+.. +++.|++
T Consensus         3 ~IGII-GGmgp~at~~yy~~i~~~~~~~~d~~~~~~il~s--~~~~~~r~~~~~~~~~--~~~~~l~~~~~~-Le~~Ga~   76 (115)
T d1jfla1           3 TIGIL-GGMGPLATAELFRRIVIKTPAKRDQEHPKVIIFN--NPQIPDRTAYILGKGE--DPRPQLIWTAKR-LEECGAD   76 (115)
T ss_dssp             CEEEE-ECSSHHHHHHHHHHHHHTCCCSSGGGSCCEEEEE--CTTSCCHHHHHTTSSC--CCHHHHHHHHHH-HHHHTCS
T ss_pred             EEEEC-CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHEEE--CCCHHHHHHHHHCCCC--CHHHHHHHHHHH-HHHCCCC
T ss_conf             88884-6719899999999999998876489788125033--6878789999752422--047999999999-9966999


Q ss_pred             EEEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Q ss_conf             89971762026338999862577765445479999998
Q gi|254780905|r   79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA  116 (271)
Q Consensus        79 ~IVIACNTasa~~~~~l~~~~~~ipiigii~~~~~a~~  116 (271)
                      +|+|||||+| .+.+.++++. ++|+++|++++...++
T Consensus        77 ~i~i~cNT~H-~~~d~i~~~~-~iP~l~i~~~t~~~i~  112 (115)
T d1jfla1          77 FIIMPCNTAH-AFVEDIRKAI-KIPIISMIEETAKKVK  112 (115)
T ss_dssp             EEECSCTGGG-GGHHHHHHHC-SSCBCCHHHHHHHHHH
T ss_pred             EEEECCCHHH-HHHHHHHHHC-CCCEECHHHHHHHHHH
T ss_conf             9997675899-9999999877-9988648999999998


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/glutamate racemase
family: Aspartate/glutamate racemase
domain: Aspartate racemase
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]