HHSEARCH alignment of GI: 254780905 and SCOP domain: d1jfla1

Alignment
>d1jfla1 c.78.2.1 (A:1-115) Aspartate racemase {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=94.33  E-value=0.13  Score=28.04  Aligned_cols=104  Identities=13%  Similarity=0.106  Sum_probs=62.3

Q ss_pred             CCEEEEE---CHHHHCCHHHHHHHHHCCCC-----CEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf             8329985---06773170168998512788-----579770564225787766426776979999999998465410588
Q gi|254780905|r  121 GLISILS---TPATLRRTYTSNLIHSYVSQ-----CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT  192 (271)
Q Consensus       121 ~~VgiLA---T~~Ti~s~~y~~~i~~~~~~-----~~v~~~~~~~lv~~iE~~~~~~~~~~~~~~~~l~~~l~~~~~~~~  192 (271)
                      |+|||+|   ..+|+  .+|++..+.....     ..+.....+..-........+...    ....+....+.+...++
T Consensus         2 k~IGIIGGmgp~at~--~yy~~i~~~~~~~~d~~~~~~il~s~~~~~~r~~~~~~~~~~----~~~~l~~~~~~Le~~Ga   75 (115)
T d1jfla1           2 KTIGILGGMGPLATA--ELFRRIVIKTPAKRDQEHPKVIIFNNPQIPDRTAYILGKGED----PRPQLIWTAKRLEECGA   75 (115)
T ss_dssp             CCEEEEECSSHHHHH--HHHHHHHHTCCCSSGGGSCCEEEEECTTSCCHHHHHTTSSCC----CHHHHHHHHHHHHHHTC
T ss_pred             CEEEECCCCCHHHHH--HHHHHHHHHHHHHCCCCCCHHHEEECCCHHHHHHHHHCCCCC----HHHHHHHHHHHHHHCCC
T ss_conf             788884671989999--999999999887648978812503368787899997524220----47999999999996699


Q ss_pred             CEEEECCCCHHHHHHHHHHHCCCCCEEEECHHHHHHHHHH
Q ss_conf             7899805635889999998648997898285899999999
Q gi|254780905|r  193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC  232 (271)
Q Consensus       193 D~iILGCTHyPll~~~i~~~~~~~v~iIDpa~~va~~~~~  232 (271)
                      |.+++.|---=++.+.+++..  +++++|=.+++++++++
T Consensus        76 ~~i~i~cNT~H~~~d~i~~~~--~iP~l~i~~~t~~~i~~  113 (115)
T d1jfla1          76 DFIIMPCNTAHAFVEDIRKAI--KIPIISMIEETAKKVKE  113 (115)
T ss_dssp             SEEECSCTGGGGGHHHHHHHC--SSCBCCHHHHHHHHHHH
T ss_pred             CEEEECCCHHHHHHHHHHHHC--CCCEECHHHHHHHHHHH
T ss_conf             999976758999999999877--99886489999999985


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/glutamate racemase
family: Aspartate/glutamate racemase
domain: Aspartate racemase
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]