BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780905|ref|YP_003065318.1| glutamate racemase [Candidatus
Liberibacter asiaticus str. psy62]
(271 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|239827939|ref|YP_002950563.1| glutamate racemase [Geobacillus sp. WCH70]
gi|259509915|sp|C5D5M9|MURI_GEOSW RecName: Full=Glutamate racemase
gi|239808232|gb|ACS25297.1| glutamate racemase [Geobacillus sp. WCH70]
Length = 264
Score = 271 bits (692), Expect = 1e-70, Method: Composition-based stats.
Identities = 58/258 (22%), Positives = 114/258 (44%), Gaps = 6/258 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I + DSG+GGL V +++ +P+ +Y+ D PYG +++ ++
Sbjct: 1 MERAIGVIDSGVGGLTVAKEIMRQLPKERIVYLGDTARCPYGPRPKEEIRQFTWE-MTNY 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L +Y + VIACNTA ++ DE+R P + A T++G I ++ T T
Sbjct: 60 LLRYNIKMLVIACNTATAVVLDEIREQLDIPVLGVVHPGARAALKATKNGHIGVIGTIGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + S + + ++ VE + +E +K + +
Sbjct: 120 VKSGAYEKALKSINHRVRVESLACPKFVPLVE----SGNFEGEEARKIVAESLEPFKSSN 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHAL 250
DV++L CTHYPL+ + ++ V + + D AR +L + T + +H
Sbjct: 176 MDVLILGCTHYPLLSPLIKEYMGKRVKLICSGDETAREVSAILHHSHLLYTGQREAEHLF 235
Query: 251 FLSGKPDIAMRRLMQGFG 268
F +G ++ + + FG
Sbjct: 236 FTTGSKELFQKIASKWFG 253
>gi|295399429|ref|ZP_06809411.1| glutamate racemase [Geobacillus thermoglucosidasius C56-YS93]
gi|312110012|ref|YP_003988328.1| glutamate racemase [Geobacillus sp. Y4.1MC1]
gi|294978895|gb|EFG54491.1| glutamate racemase [Geobacillus thermoglucosidasius C56-YS93]
gi|311215113|gb|ADP73717.1| glutamate racemase [Geobacillus sp. Y4.1MC1]
Length = 264
Score = 269 bits (687), Expect = 4e-70, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 115/258 (44%), Gaps = 6/258 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I + DSG+GGL V +++ +P+ +Y+ D PYG + +++ ++
Sbjct: 1 MERAIGVIDSGVGGLTVAKEIMRQLPKERIVYLGDTARCPYGPRPEEEIRQFTWE-MTNY 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L +Y + VIACNTA ++ DE+R P + A T++G I ++ T T
Sbjct: 60 LLQYNIKMLVIACNTATAVVLDEIREQLDIPVLGVVHPGARAALKATKNGHIGVIGTIGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + S + H+ ++ VE + +E KK + +
Sbjct: 120 VKSGAYEKALKSINPRVHVESLACPKFVPLVE----SGNFEGEEAKKIVAESLEPFKSSN 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHAL 250
DV++L CTHYPL+ + ++ V + + D AR +L + T +H
Sbjct: 176 MDVLILGCTHYPLLSPLIKEYMGKRVKLICSGDETAREVSAILHHSHLLYTGQRAAEHLF 235
Query: 251 FLSGKPDIAMRRLMQGFG 268
F +G ++ + + FG
Sbjct: 236 FTTGPKELFQKIASKWFG 253
>gi|212638431|ref|YP_002314951.1| glutamate racemase [Anoxybacillus flavithermus WK1]
gi|212559911|gb|ACJ32966.1| Glutamate racemase [Anoxybacillus flavithermus WK1]
Length = 278
Score = 268 bits (686), Expect = 5e-70, Method: Composition-based stats.
Identities = 60/259 (23%), Positives = 109/259 (42%), Gaps = 6/259 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
L+ I + DSG+GGL V +++ +P+ +Y+ D PYG +++ ++
Sbjct: 13 TLERPIGVIDSGVGGLTVAKEIMRQLPKEQIVYLGDTARCPYGPRPREEIRQFTWE-MTN 71
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L Y + VIACNTA + +E+R T P + A T++ I ++ T
Sbjct: 72 YLLGYDIKMLVIACNTATAVALEEIRHTLNIPVIGVVHPGARTALKITKNYHIGVIGTIG 131
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + S S I ++ VE + + +E K+ + + +
Sbjct: 132 TVKSGAYEQALKSINSDVKIESLACPKFVPLVE----SGQFEGEEAKQIVAESLEPFKDR 187
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHA 249
D ++L CTHYPL+ + +Q V + + D AR +L T +H
Sbjct: 188 PIDTLILGCTHYPLLSPLIQQYMGEHVKLICSGDETAREVSTILHHSGLLYTGNKRREHI 247
Query: 250 LFLSGKPDIAMRRLMQGFG 268
F +G + + + FG
Sbjct: 248 FFTTGSKETFQQIASKWFG 266
>gi|327481904|gb|AEA85214.1| glutamate racemase [Pseudomonas stutzeri DSM 4166]
Length = 264
Score = 265 bits (677), Expect = 6e-69, Method: Composition-based stats.
Identities = 70/259 (27%), Positives = 116/259 (44%), Gaps = 6/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +FDSG+GGL VL+++R +P +Y+AD PYG +++R + +
Sbjct: 5 NAPVGVFDSGVGGLSVLREIRRRLPHESLLYLADSAHVPYGEKSPEYIRERCR-IIAAFF 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA ELR +P + +G PA+K AAA T+SG++ +L+T TL
Sbjct: 64 VEQGAKALVLACNTATAAGVTELRELYPDLPIIGMEPAVKPAAAATRSGVVGVLATTGTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + + L R+E + + +EG +
Sbjct: 124 KSARFAALLDRFAGDVRVITQPCPGLVERIE----AGDLASANTRAMLEGWVGPLLAQGC 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP I + QL P V +D ++AR LL + + +
Sbjct: 180 DTLILGCTHYPFIRPLLAQLLPGDVRLIDTGAAVARHLHELLAERHLLSSGEASQ-RFYC 238
Query: 253 SGKPDIAMRRLMQGFGLKS 271
SG P L +G +
Sbjct: 239 SGDPQRMAEVLPILWGEHA 257
>gi|89098912|ref|ZP_01171792.1| glutamate racemase [Bacillus sp. NRRL B-14911]
gi|89086316|gb|EAR65437.1| glutamate racemase [Bacillus sp. NRRL B-14911]
Length = 266
Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats.
Identities = 55/257 (21%), Positives = 100/257 (38%), Gaps = 6/257 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I I DSG+GGL V +++ +P + +Y+ D PYG +++ ++
Sbjct: 1 MKQPIGIIDSGVGGLTVAKEVMRQLPNENIVYLGDTARCPYGPRTAEEVRRFTWQ-MTEF 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + VIACNTA ++ +E++ P P + A ++S I I+ T T
Sbjct: 60 LLTQDIKMLVIACNTATAVVLEEIQEKLPIPVLGVIYPGARAALKVSKSNKIGIIGTIGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + + ++ VE G KK + K
Sbjct: 120 VNSKAYEKALKQINRKVCVKPLACPKFVPLVESGEYG----SAVAKKIVAETLKPLRNKD 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHAL 250
D ++L CTHYPL+ + + + V + + + AR +L + H
Sbjct: 176 LDTLILGCTHYPLLEPLIKNIMGPGVKVISSGEETAREVSTILDYRGLLNQSADEPVHKY 235
Query: 251 FLSGKPDIAMRRLMQGF 267
F +G I + Q
Sbjct: 236 FATGSISIFTKIAGQWL 252
>gi|196250191|ref|ZP_03148885.1| glutamate racemase [Geobacillus sp. G11MC16]
gi|196210375|gb|EDY05140.1| glutamate racemase [Geobacillus sp. G11MC16]
Length = 264
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 111/258 (43%), Gaps = 6/258 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 1 MERAIGVIDSGVGGLTVAKEIIRQLPKERIIYLGDTARCPYGPRPIEEIRQFTWQMI-HY 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L +Y + VIACNTA ++ DE+R+ P + A T++G I ++ T T
Sbjct: 60 LQQYPLKMLVIACNTATAVVLDEVRAKLDIPVLGVVHPGARAALKATKNGHIGVIGTVGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R + S + H+ ++ VE ++ + +
Sbjct: 120 VRSKAYEKALQSINPRVHVESLACPKFVPLVESGDFEG----EKALAIVAESLAPLRPRP 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHAL 250
DV++L CTHYPL+ + R+ V + + D AR +L + T +H
Sbjct: 176 IDVLILGCTHYPLLAPLIREYMGKKVKLICSGDETAREVSAILHHSHLLYTGGCEPEHLF 235
Query: 251 FLSGKPDIAMRRLMQGFG 268
F +G ++ + + FG
Sbjct: 236 FTTGSKELFEKISRKWFG 253
>gi|330967413|gb|EGH67673.1| glutamate racemase [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 275
Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats.
Identities = 68/257 (26%), Positives = 118/257 (45%), Gaps = 5/257 (1%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + +FDSG+GGL VL ++R +P +Y+AD PYG + +R +
Sbjct: 9 PVNPGCDAPVGVFDSGVGGLSVLNEIRQTLPNESLLYLADCGHIPYGEKTPEFIIERCL- 67
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
+ +D + V+ACNTA +R +P +G PA+K AA T+SG++ +L
Sbjct: 68 IIADFFHEQGAKALVVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVL 127
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T TL+ + L+ + S + L +E + +I++ ++
Sbjct: 128 ATTGTLQSARFAALLDRFASDVSVVTQPCPGLVELIET----GDLVSPQIRQLLQRYVEP 183
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
R D I+L CTHYP + + R++ P V +D ++AR+ + LL R +
Sbjct: 184 LLAARCDTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSGLLASGPAR 243
Query: 247 DHALFLSGKPDIAMRRL 263
+ + S PD + L
Sbjct: 244 ETVYWSSDIPDNFGKIL 260
>gi|311031420|ref|ZP_07709510.1| glutamate racemase [Bacillus sp. m3-13]
Length = 269
Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats.
Identities = 54/257 (21%), Positives = 107/257 (41%), Gaps = 6/257 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+Q I + DSG+GGL V +++ +P+ IY+ D PYG ++ +
Sbjct: 1 MQRPIGVIDSGVGGLTVAKEIMRQLPKERIIYLGDTARCPYGPRPVDEVRLYTWE-MTRY 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + + VIACNTA ++ DE+R P + A T + + ++ T T
Sbjct: 60 LLTHDIKMLVIACNTATAVVLDEIREQLDIPVIGVVDPGARTALKVTSNYQVGVIGTVGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ +N + S ++ + ++ VE + K+ +E +G +
Sbjct: 120 INSGAYANALKSINNEVKVESLACPNFVPLVESGEFEG----ERAKEIVEDTLHLFKGSK 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHAL 250
D ++L CTHYPL+ + + + + + D AR +L + ++H
Sbjct: 176 IDTLILGCTHYPLLTPTIQAVMGDGIQLISSGDETAREVSTILNFKKLLNKKQRTENHQF 235
Query: 251 FLSGKPDIAMRRLMQGF 267
+ +G ++ + + F
Sbjct: 236 YTTGSKELFEKIASKLF 252
>gi|296331613|ref|ZP_06874082.1| glutamate racemase [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305675428|ref|YP_003867100.1| glutamate racemase [Bacillus subtilis subsp. spizizenii str. W23]
gi|296151208|gb|EFG92088.1| glutamate racemase [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305413672|gb|ADM38791.1| glutamate racemase [Bacillus subtilis subsp. spizizenii str. W23]
Length = 271
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 55/258 (21%), Positives = 109/258 (42%), Gaps = 5/258 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I + DSG+GGL V +++ +P+ + IYV D PYG + + + L + +
Sbjct: 1 MEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
LD + + VIACNTA + ++++ + P + A T++ I ++ T T
Sbjct: 61 LDNHHIKMLVIACNTATAIALEDIQRSVGIPVVGVIQPGARAAIKVTENQHIGVIGTENT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + + + ++ +L VE K ++ +K +
Sbjct: 121 IKSNAYEEALLALNPDLKVENLACPLLVPFVESGKFLDKTADEIVKTS----LYPLKDTS 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHAL 250
D ++L CTHYP++ ++ V+ + + D AR +L + + DH
Sbjct: 177 IDTLILGCTHYPILKESIQRYMGEHVNIISSGDETAREVSTILSYKGLLNQSPIVPDHQF 236
Query: 251 FLSGKPDIAMRRLMQGFG 268
+G D + FG
Sbjct: 237 LTTGARDQFAKIADDWFG 254
>gi|47776277|dbj|BAD20742.1| glutamate racemase [Bacillus subtilis]
Length = 271
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 54/258 (20%), Positives = 108/258 (41%), Gaps = 5/258 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I + DSG+GGL V +++ +P+ + IYV D PYG + + + L + +
Sbjct: 1 MEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ + + VIACNTA + D+++ + P + A T + I ++ T T
Sbjct: 61 LENHHIKMLVIACNTATAIALDDIQRSVGIPVVGVIQPGARAAIKVTDNQHIGVIGTENT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + + + ++ +L VE K + + ++ +
Sbjct: 121 IKSNAYEEALLALNPDLKVENLACPLLVPFVE----SGKFLDQTADEIVKTSLYPLKDTS 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHAL 250
D ++L CTHYP++ ++ V+ + + D AR +L + + DH
Sbjct: 177 IDSLILGCTHYPILKEAIQRYMGEHVNIISSGDETAREVSTILSYKGLLNQSPIAPDHQF 236
Query: 251 FLSGKPDIAMRRLMQGFG 268
+G D + FG
Sbjct: 237 LTTGARDQFAKIADDWFG 254
>gi|328912861|gb|AEB64457.1| Glutamate racemase [Bacillus amyloliquefaciens LL3]
Length = 271
Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 108/258 (41%), Gaps = 5/258 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I + DSG+GGL V +++ +P+ + IYV D PYG + + + + +
Sbjct: 1 MEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWEMTDYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ + + VIACNTA + ++++ P + A T++ I ++ T T
Sbjct: 61 LENHHIKMLVIACNTATAIALEDIQRKTDIPVVGVIQPGARTAIKVTKNQHIGVIGTINT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + + + ++ +L VE + ++ + +E +G
Sbjct: 121 IKSRAYEQALLGLNADLQVENMACPLLVPFVE----SGRFLQESAAEAVEASLEPLKGTA 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHAL 250
D ++L CTHYP++ + V + + D AR +L ++ +H
Sbjct: 177 IDTLILGCTHYPILKDPIQDYMGKHVKIISSGDETAREVSTILSYKGLLNQSKHAPEHQF 236
Query: 251 FLSGKPDIAMRRLMQGFG 268
+G+ + + FG
Sbjct: 237 LTTGERNGFAKIAEDWFG 254
>gi|321312372|ref|YP_004204659.1| glutamate racemase [Bacillus subtilis BSn5]
gi|320018646|gb|ADV93632.1| glutamate racemase [Bacillus subtilis BSn5]
Length = 271
Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats.
Identities = 55/258 (21%), Positives = 107/258 (41%), Gaps = 5/258 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I + DSG+GGL V +++ +P+ + IYV D PYG + + + L + +
Sbjct: 1 MEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ + + VIACNTA + D+++ + P + A T + I ++ T T
Sbjct: 61 LENHHIKMLVIACNTATAIALDDIQRSVGIPVVGVIQPGARAAIKVTDNQHIGVIGTENT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + + + ++ +L VE K ++ +K +
Sbjct: 121 IKSNAYEEALLALNPDLKVENLACPLLVPFVESGKFLDKTADEIVKTS----LYPLKDTS 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHAL 250
D ++L CTHYP++ ++ V+ + + D AR +L + DH
Sbjct: 177 IDSLILGCTHYPILKEAIQRYMGEHVNIISSGDETAREVSTILSYKGLLNQSANAPDHQF 236
Query: 251 FLSGKPDIAMRRLMQGFG 268
+G D + FG
Sbjct: 237 LTTGARDQFAKIADDWFG 254
>gi|328554458|gb|AEB24950.1| glutamate racemase [Bacillus amyloliquefaciens TA208]
Length = 271
Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 107/258 (41%), Gaps = 5/258 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I + DSG+GGL V +++ +P+ + IYV D PYG + + + + +
Sbjct: 1 MEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWEMTDYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ + + VIACNTA + ++++ P + A T++ I ++ T T
Sbjct: 61 LENHHIKMLVIACNTATAIALEDIQRKTDIPVVGVIQPGARTAIKVTKNQHIGVIGTINT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + + + + +L VE + ++ + +E +G
Sbjct: 121 IKSRAYEQALLGLNADLQVENTACPLLVPFVE----SGRFLQESAAEAVEASLEPLKGTA 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHAL 250
D ++L CTHYP++ + V + + D AR +L ++ +H
Sbjct: 177 IDTLILGCTHYPILKDPIQDYMGKHVKIISSGDETAREVSTILSYKGLLNQSKHAPEHQF 236
Query: 251 FLSGKPDIAMRRLMQGFG 268
+G+ + + FG
Sbjct: 237 LTTGERNGFAKIAEDWFG 254
>gi|213967221|ref|ZP_03395370.1| glutamate racemase [Pseudomonas syringae pv. tomato T1]
gi|301381043|ref|ZP_07229461.1| glutamate racemase [Pseudomonas syringae pv. tomato Max13]
gi|302060375|ref|ZP_07251916.1| glutamate racemase [Pseudomonas syringae pv. tomato K40]
gi|302134865|ref|ZP_07260855.1| glutamate racemase [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|213928063|gb|EEB61609.1| glutamate racemase [Pseudomonas syringae pv. tomato T1]
Length = 275
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 69/257 (26%), Positives = 118/257 (45%), Gaps = 5/257 (1%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + + +FDSG+GGL VL ++R +P +Y+AD PYG + +R +
Sbjct: 9 PVLQNCDAPVGVFDSGVGGLSVLNEIRQTLPNESLLYLADCGHIPYGEKTPEFIIERCL- 67
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
+ +D V+ACNTA +R +P +G PA+K AA T+SG++ +L
Sbjct: 68 IIADFFHGQGAKALVVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVL 127
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T TL+ + L+ + S + L +E + +I++ ++
Sbjct: 128 ATTGTLQSARFAALLDRFASDVSVVTQPCPGLVELIET----GDLVSPQIRQLLQRYVEP 183
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
R D I+L CTHYP + + R++ P V +D ++AR+ + LL R +
Sbjct: 184 LLAARCDTIILGCTHYPFLKPLLREMLPASVTLIDTGAAVARQLQRLLSRSGLLASGPAR 243
Query: 247 DHALFLSGKPDIAMRRL 263
D + S PD + L
Sbjct: 244 DTVYWSSDIPDNFGKIL 260
>gi|221310780|ref|ZP_03592627.1| glutamate racemase [Bacillus subtilis subsp. subtilis str. 168]
gi|221315105|ref|ZP_03596910.1| glutamate racemase [Bacillus subtilis subsp. subtilis str. NCIB
3610]
gi|221320023|ref|ZP_03601317.1| glutamate racemase [Bacillus subtilis subsp. subtilis str. JH642]
gi|221324306|ref|ZP_03605600.1| glutamate racemase [Bacillus subtilis subsp. subtilis str. SMY]
gi|3241851|dbj|BAA28871.1| glutamate racemase [Bacillus subtilis]
gi|291485269|dbj|BAI86344.1| glutamate racemase [Bacillus subtilis subsp. natto BEST195]
Length = 271
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 55/258 (21%), Positives = 108/258 (41%), Gaps = 5/258 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I + DSG+GGL V +++ +P+ + IYV D PYG + + + L + +
Sbjct: 1 MEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ + + VIACNTA + D+++ + P + A T + I ++ T T
Sbjct: 61 LENHHIKMLVIACNTATAIALDDIQRSVGIPVVGVIQPGARAAIKVTDNQHIGVIGTENT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + + + ++ +L VE K ++ +K +
Sbjct: 121 IKSNAYEEALLALNPDLKVENLACPLLVPFVESGKFLDKTADEIVKTS----LYPLKDTS 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHAL 250
D ++L CTHYP++ ++ V+ + + D AR +L + + DH
Sbjct: 177 IDSLILGCTHYPILKEAIQRYMGEHVNIISSGDETAREVSTILSYKGLLNQSPIAPDHQF 236
Query: 251 FLSGKPDIAMRRLMQGFG 268
+G D + FG
Sbjct: 237 LTTGARDQFAKIADDWFG 254
>gi|330873304|gb|EGH07453.1| glutamate racemase [Pseudomonas syringae pv. morsprunorum str.
M302280PT]
Length = 275
Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats.
Identities = 69/257 (26%), Positives = 120/257 (46%), Gaps = 5/257 (1%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + + +FDSG+GGL VL ++R +P+ +Y+AD PYG + +R +
Sbjct: 9 PVLQNCDAPVGVFDSGVGGLSVLNEIRQTLPKESLLYLADCGHIPYGEKTPEFIIERCL- 67
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
+ +D + V+ACNTA +R +P +G PA+K AA T+SG++ +L
Sbjct: 68 IIADFFHEQGAKALVVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVL 127
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T TL+ + L+ + S + L +E + +I++ ++
Sbjct: 128 ATTGTLQSARFAALLDRFASDVSVVTQPCPGLVELIET----GDLVSPQIRQLLQRYVEP 183
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
R D I+L CTHYP + + R++ P V +D ++AR+ + LL R +
Sbjct: 184 LLAARCDTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSGLLASGPAR 243
Query: 247 DHALFLSGKPDIAMRRL 263
D + S PD + L
Sbjct: 244 DTVYWSSDIPDNFGKIL 260
>gi|154686974|ref|YP_001422135.1| glutamate racemase [Bacillus amyloliquefaciens FZB42]
gi|166231025|sp|A7Z7C8|MURI_BACA2 RecName: Full=Glutamate racemase
gi|154352825|gb|ABS74904.1| RacE [Bacillus amyloliquefaciens FZB42]
Length = 272
Score = 262 bits (670), Expect = 4e-68, Method: Composition-based stats.
Identities = 52/258 (20%), Positives = 109/258 (42%), Gaps = 5/258 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L+ I + DSG+GGL V +++ +P+ + IYV D PYG + + + + +
Sbjct: 2 LEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWEMTDYL 61
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ + + VIACNTA + ++++ P + A T++ I ++ T T
Sbjct: 62 LENHHIKMLVIACNTATAIALEDIQRKTDIPVVGVIQPGARTAIKVTKNQHIGVIGTVNT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + ++ + + +L VE + ++ ++ +E +G
Sbjct: 122 IKSRAYEQALLGLNAELQVENTACPLLVPFVE----SGRFLQESAEEAVEASLEPLKGTS 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHAL 250
D ++L CTHYP++ + V + + D AR +L ++ +H
Sbjct: 178 IDTLILGCTHYPILKDPIQNYMGEHVKIISSGDETAREVSTILSYKGLLNQSKHAPEHQF 237
Query: 251 FLSGKPDIAMRRLMQGFG 268
+G+ + + FG
Sbjct: 238 LTTGERNGFAKIAEDWFG 255
>gi|330502036|ref|YP_004378905.1| glutamate racemase [Pseudomonas mendocina NK-01]
gi|328916322|gb|AEB57153.1| glutamate racemase [Pseudomonas mendocina NK-01]
Length = 271
Score = 261 bits (667), Expect = 8e-68, Method: Composition-based stats.
Identities = 72/271 (26%), Positives = 126/271 (46%), Gaps = 5/271 (1%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M + I +FDSG+GGL VL+++R L+P +YVAD PYG +
Sbjct: 1 MILPAAFAAMPSNAPIGVFDSGVGGLSVLREIRQLLPNETLLYVADSGHVPYGEKSPEYI 60
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
++R + + ++ L V+ACNTA ELR + + +G PA+K AAA T+S
Sbjct: 61 RERCV-VITEHLRAQGAKALVLACNTATAAAAGELRERYADLPIVGMEPAVKPAAAATRS 119
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T TL+ + L+ + + + L +E ++ ++ +
Sbjct: 120 GVVGVLATTGTLKSARFAALLDRFANDVRVITQPCPGLVECIEAGE----LQAPATRELL 175
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+G + D ++L CTHYP + + +L P V +D ++AR+ + LL + +
Sbjct: 176 QGYVAPLLAEGCDTLILGCTHYPFLRPLLGELVPPSVTLIDTGAAVARQLQRLLTQHDLL 235
Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
T + SG+ R L G K+
Sbjct: 236 ATTPAQATRYWSSGEVSQLCRVLPILLGEKA 266
>gi|146283506|ref|YP_001173659.1| glutamate racemase [Pseudomonas stutzeri A1501]
gi|167017320|sp|A4VPB6|MURI_PSEU5 RecName: Full=Glutamate racemase
gi|145571711|gb|ABP80817.1| glutamate racemase [Pseudomonas stutzeri A1501]
Length = 264
Score = 261 bits (667), Expect = 8e-68, Method: Composition-based stats.
Identities = 68/257 (26%), Positives = 121/257 (47%), Gaps = 6/257 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ +FDSG+GGL VL+++R +P +Y+AD PYG +++R + + ++K
Sbjct: 7 PVGVFDSGVGGLSVLREIRQRLPHESLLYLADSAHVPYGEKSPEYIRERCRVIAAFFVEK 66
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA ELR +P + + PA+K AA T+SG++ +L+T TL+
Sbjct: 67 -GAKALVVACNTATAAGVTELRELYPQLPIIAMEPAVKPAALATRSGVVGVLATTGTLKS 125
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ L+ + + + L R+E ++ + + + G + D
Sbjct: 126 AKFAALLDRFAADVRVITQPCPGLVERIE----AGDLESADTRAMLMGWVEPMLAQGCDT 181
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
++L CTHYP I + +QL P + +D ++AR R +L + + + SG
Sbjct: 182 LILGCTHYPFIRPLLQQLLPNDIRLIDTGAAVARHLREMLAERHLLASGDA-TQRFYCSG 240
Query: 255 KPDIAMRRLMQGFGLKS 271
P R L +G +
Sbjct: 241 DPQRMARVLPILWGENA 257
>gi|311069331|ref|YP_003974254.1| glutamate racemase [Bacillus atrophaeus 1942]
gi|310869848|gb|ADP33323.1| glutamate racemase [Bacillus atrophaeus 1942]
Length = 271
Score = 261 bits (667), Expect = 9e-68, Method: Composition-based stats.
Identities = 54/258 (20%), Positives = 105/258 (40%), Gaps = 5/258 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P+ + IYV D PYG + + + L +
Sbjct: 1 MDQPIGVIDSGVGGLTVAKEIIRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTRELTQYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ + + VIACNTA + D ++ P + A T++ I ++ T T
Sbjct: 61 LNSHHIKMLVIACNTATAIALDAIKREVDIPVVGVIQPGARTAIKVTKNQTIGVIGTENT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + + ++ + ++ +L VE K + + +E +
Sbjct: 121 IKSGAYEEALVALNTELKVENLACPLLVPFVE----SGKFLDKTADEIVETSLHPLKNTT 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHAL 250
D ++L CTHYP++ ++ V + + D AR +L F +H
Sbjct: 177 IDTLILGCTHYPILKDAIQRYMGEHVKIISSGDETAREVSTILSYKGLLNQSPFAAEHQF 236
Query: 251 FLSGKPDIAMRRLMQGFG 268
+G+ + FG
Sbjct: 237 LTTGERSRFAKIADDWFG 254
>gi|95931009|ref|ZP_01313737.1| Glutamate racemase [Desulfuromonas acetoxidans DSM 684]
gi|95132905|gb|EAT14576.1| Glutamate racemase [Desulfuromonas acetoxidans DSM 684]
Length = 289
Score = 261 bits (666), Expect = 9e-68, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 103/256 (40%), Gaps = 5/256 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+N+I +FDSG+GGL VL ++R L+P + IY+ D PYG+ + ++ L
Sbjct: 16 ENAIGVFDSGVGGLTVLHELRRLLPGENLIYLGDTARVPYGSKSPETVCSYS-EQAAEFL 74
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Q + V+ACNTA + + L+ P +P + A ++ ++ ++ T T+
Sbjct: 75 LAKQVKMIVVACNTASSFALERLQQCLPVPVVGVILPGARCAVRLSRRHVVGVIGTHGTV 134
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + + EE + ++ ++
Sbjct: 135 SSDAYPRALKALQPDMKVVSEPCPLFVPLAEEGWAEHAVAHQVARE----YLAPLLEQQI 190
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTHYPL+ RQ+ P V +D++ A + LL F+
Sbjct: 191 DTLVLGCTHYPLLKPTLRQVLPDTVQLVDSAQETALEVKELLSEHGLLNPGERGSWTFFV 250
Query: 253 SGKPDIAMRRLMQGFG 268
+ P ++ G
Sbjct: 251 TDVPTRFVQVGQGFLG 266
>gi|28868327|ref|NP_790946.1| glutamate racemase [Pseudomonas syringae pv. tomato str. DC3000]
gi|38257978|sp|Q888B8|MURI_PSESM RecName: Full=Glutamate racemase
gi|28851564|gb|AAO54641.1| glutamate racemase [Pseudomonas syringae pv. tomato str. DC3000]
gi|331018119|gb|EGH98175.1| glutamate racemase [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 275
Score = 261 bits (666), Expect = 1e-67, Method: Composition-based stats.
Identities = 69/257 (26%), Positives = 117/257 (45%), Gaps = 5/257 (1%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + +FDSG+GGL VL ++R +P +Y+AD PYG + +R +
Sbjct: 9 PVNPGCDAPVGVFDSGVGGLSVLNEIRQTLPNESLLYLADCGHIPYGEKTPEFIIERCL- 67
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
+ +D V+ACNTA +R +P +G PA+K AA T+SG++ +L
Sbjct: 68 IIADFFHGQGAKALVVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVL 127
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T TL+ + L+ + S + L +E + +I++ ++
Sbjct: 128 ATTGTLQSARFAALLDRFASDVSVVTQPCPGLVELIET----GDLVSPQIRQLLQRYVEP 183
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
R D I+L CTHYP + + R++ P V +D ++AR+ + LL R +
Sbjct: 184 LLAARCDTIILGCTHYPFLKPLLREMLPASVTLIDTGAAVARQLQRLLSRSGLLASGPAR 243
Query: 247 DHALFLSGKPDIAMRRL 263
D + S PD + L
Sbjct: 244 DTLYWSSDIPDNFGKIL 260
>gi|83753859|pdb|1ZUW|A Chain A, Crystal Structure Of B.Subtilis Glutamate Racemase (Race)
With D-Glu
gi|83753860|pdb|1ZUW|B Chain B, Crystal Structure Of B.Subtilis Glutamate Racemase (Race)
With D-Glu
gi|83753861|pdb|1ZUW|C Chain C, Crystal Structure Of B.Subtilis Glutamate Racemase (Race)
With D-Glu
gi|1770057|emb|CAA99552.1| glutamate racemase [Bacillus subtilis]
Length = 272
Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats.
Identities = 55/258 (21%), Positives = 108/258 (41%), Gaps = 5/258 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L+ I + DSG+GGL V +++ +P+ + IYV D PYG + + + L + +
Sbjct: 2 LEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYL 61
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ + + VIACNTA + D+++ + P + A T + I ++ T T
Sbjct: 62 LENHHIKMLVIACNTATAIALDDIQRSVGIPVVGVIQPGARAAIKVTDNQHIGVIGTENT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + + + ++ +L VE K + + ++ +
Sbjct: 122 IKSNAYEEALLALNPDLKVENLACPLLVPFVE----SGKFLDQTADEIVKTSLYPLKDTS 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHAL 250
D ++L CTHYP++ ++ V+ + + D AR +L + + DH
Sbjct: 178 IDSLILGCTHYPILKEAIQRYMGEHVNIISSGDETAREVSTILSYKGLLNQSPIAPDHQF 237
Query: 251 FLSGKPDIAMRRLMQGFG 268
+G D + FG
Sbjct: 238 LTTGARDQFAKIADDWFG 255
>gi|308174536|ref|YP_003921241.1| glutamate racemase [Bacillus amyloliquefaciens DSM 7]
gi|307607400|emb|CBI43771.1| glutamate racemase [Bacillus amyloliquefaciens DSM 7]
Length = 272
Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats.
Identities = 52/258 (20%), Positives = 108/258 (41%), Gaps = 5/258 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L+ I + DSG+GGL V +++ +P+ + IYV D PYG + + + + +
Sbjct: 2 LEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWEMTDYL 61
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ + + VIACNTA + ++++ P + A T++ I ++ T T
Sbjct: 62 LENHHIKMLVIACNTATAIALEDIQRKTDIPVVGVIQPGARTAIKVTKNQHIGVIGTINT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + + + ++ +L VE + ++ + +E +G
Sbjct: 122 IKSRAYEQALLGLNADLQVENMACPLLVPFVE----SGRFLQESAAEAVEASLEPLKGTA 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHAL 250
D ++L CTHYP++ + V + + D AR +L ++ +H
Sbjct: 178 IDTLILGCTHYPILKDPIQDYMGKHVKIISSGDETAREVSTILSYKGLLNQSKHAPEHQF 237
Query: 251 FLSGKPDIAMRRLMQGFG 268
+G+ + + FG
Sbjct: 238 LTTGERNGFAKIAEDWFG 255
>gi|237799730|ref|ZP_04588191.1| glutamate racemase [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331022585|gb|EGI02642.1| glutamate racemase [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 271
Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats.
Identities = 70/251 (27%), Positives = 116/251 (46%), Gaps = 5/251 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ IFDSG+GGL VL ++R +P +YVAD PYG + +R + +
Sbjct: 11 DAPVGIFDSGVGGLSVLNEIRQSLPNESLLYVADCGHIPYGEKTPEFIIERCLTIAGFFR 70
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA LR +P +G PA+K AA T+SG++ +L+T TL
Sbjct: 71 -EQGAKALVVACNTATAAGVAHLRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTL 129
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + S + L +E + +I++ ++ +
Sbjct: 130 QSARFAALLDRFASDVRVVTQPCPGLVELIET----GDLISPQIRQLLQHYVKPLLAAQC 185
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D I+L CTHYP + + R++ P V +D ++AR+ + LL R + D +
Sbjct: 186 DTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSGLLASGPARDTLYWS 245
Query: 253 SGKPDIAMRRL 263
SG PD + L
Sbjct: 246 SGIPDNFRKIL 256
>gi|228923236|ref|ZP_04086526.1| Glutamate racemase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|228836442|gb|EEM81793.1| Glutamate racemase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
Length = 269
Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats.
Identities = 56/260 (21%), Positives = 106/260 (40%), Gaps = 6/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 1 MKLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWE-MT 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L + VIACNTA ++ +E++ P P + A T + + I+ T
Sbjct: 60 EHLLDLNIKMLVIACNTATAVVLEEMQKQLPIPVVGVIHPGSRTALKVTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE + + + + +
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVE----SGNFESEMAYEVVRETLQPLKS 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDH 248
D ++L CTHYP++ V +++ V + + D AR +L DH
Sbjct: 176 TDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK D+ + FG
Sbjct: 236 LFLTTGKIDLFKEIASKWFG 255
>gi|255767654|ref|NP_390717.2| glutamate racemase [Bacillus subtilis subsp. subtilis str. 168]
gi|251757300|sp|P94556|MURI1_BACSU RecName: Full=Glutamate racemase 1
gi|225185282|emb|CAB14799.2| glutamate racemase [Bacillus subtilis subsp. subtilis str. 168]
Length = 272
Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats.
Identities = 56/258 (21%), Positives = 108/258 (41%), Gaps = 5/258 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L+ I + DSG+GGL V +++ +P+ + IYV D PYG + + + L + +
Sbjct: 2 LEQPIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYL 61
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ + + VIACNTA + D+++ + P + A T + I ++ T T
Sbjct: 62 LENHHIKMLVIACNTATAIALDDIQRSVGIPVVGVIQPGARAAIKVTDNQHIGVIGTENT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + + + ++ +L VE K ++ +K +
Sbjct: 122 IKSNAYEEALLALNPDLKVENLACPLLVPFVESGKFLDKTADEIVKTS----LYPLKDTS 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHAL 250
D ++L CTHYP++ ++ V+ + + D AR +L + + DH
Sbjct: 178 IDSLILGCTHYPILKEAIQRYMGEHVNIISSGDETAREVSTILSYKGLLNQSPIAPDHQF 237
Query: 251 FLSGKPDIAMRRLMQGFG 268
+G D + FG
Sbjct: 238 LTTGARDQFAKIADDWFG 255
>gi|330961731|gb|EGH61991.1| glutamate racemase [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 271
Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats.
Identities = 66/251 (26%), Positives = 114/251 (45%), Gaps = 5/251 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +FDSG+GGL VL ++R L+P +Y+AD PYG + +R + +
Sbjct: 11 DAPVGVFDSGVGGLSVLNEIRQLLPNESLLYLADCGHIPYGEKTPEFIIERCLTIAGFF- 69
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA +R +P +G PA+K AA T+SG++ +L+T TL
Sbjct: 70 HEQGAKALVVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTL 129
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + S + L +E + +I+ + R
Sbjct: 130 QSARFAALLDRFASDVRVVTQPCPGLVELIE----SGDLVSPQIRALLSRYVEPLLAARC 185
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP + + R++ P V +D ++AR+ + LL R + + +
Sbjct: 186 DTVILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSGLLASGPARETVYWS 245
Query: 253 SGKPDIAMRRL 263
S PD + L
Sbjct: 246 SDIPDNFGKIL 256
>gi|70732473|ref|YP_262235.1| glutamate racemase [Pseudomonas fluorescens Pf-5]
gi|68346772|gb|AAY94378.1| glutamate racemase [Pseudomonas fluorescens Pf-5]
Length = 267
Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats.
Identities = 66/251 (26%), Positives = 114/251 (45%), Gaps = 5/251 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL VL +++ L+P +Y D PYG +++R L +
Sbjct: 7 EAPIGVFDSGVGGLSVLAEIQQLLPHESLLYFGDCGHIPYGEKTPEFIRQRCS-LMARFF 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA +LR +P +G PA+K AAA T+SG++ +L+T TL
Sbjct: 66 REQGAKALVLACNTATVAGVADLRRDYPDWPIVGMEPAVKPAAAATRSGVVGVLATTGTL 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + + + L +E + +++ + G
Sbjct: 126 QSAKFAALLDRFATDVKVVTQPCPGLVEMIE----NGDLHSAALRQLLHGYLEPLLAAGC 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D I+L CTHYP + + Q+ P P+ +D ++AR+ + LL + + +
Sbjct: 182 DTIILGCTHYPFLKPLLAQMLPGPISLIDTGAAVARQLQRLLDEGDLRAQGPARETCFWT 241
Query: 253 SGKPDIAMRRL 263
SG R L
Sbjct: 242 SGDVPHFARVL 252
>gi|288553638|ref|YP_003425573.1| glutamate racemase [Bacillus pseudofirmus OF4]
gi|288544798|gb|ADC48681.1| glutamate racemase [Bacillus pseudofirmus OF4]
Length = 269
Score = 260 bits (664), Expect = 2e-67, Method: Composition-based stats.
Identities = 52/257 (20%), Positives = 102/257 (39%), Gaps = 6/257 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P+ +Y+ D PYG ++ + + +
Sbjct: 1 MDRPIGVIDSGLGGLTVAKELMRQLPKEEIVYLGDSARCPYGPRTSEEVRTYTWEMINRL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L++ + VIACNTA ++ +E++ P A T+ ++++ T T
Sbjct: 61 LEE-NMKMLVIACNTATAVVLEEVKKELSIPVVGVVHPGATSALKVTKKDHVAVIGTVGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + S + + ++ VE + +K+ +E + +
Sbjct: 120 IESGAYEKALKSINHEVKVESLACPPFVPLVERGVFEGAEADLIVKEVLE----PLQNRG 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHAL 250
D ++L CTHYPL+ ++ V + + D AR LL N + H
Sbjct: 176 FDTMILGCTHYPLLKDTIQKQMGPDVQLISSGDETAREVSGLLYHNNLLFTDQRKPTHRF 235
Query: 251 FLSGKPDIAMRRLMQGF 267
F +G D +
Sbjct: 236 FTTGDKDQFKTLADKWL 252
>gi|229918347|ref|YP_002886993.1| glutamate racemase [Exiguobacterium sp. AT1b]
gi|229469776|gb|ACQ71548.1| glutamate racemase [Exiguobacterium sp. AT1b]
Length = 272
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 53/260 (20%), Positives = 106/260 (40%), Gaps = 6/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+++ +I + DSG+GGL V++++ +P+ +Y+ D PYG ++ L
Sbjct: 4 MQMKRAIGVLDSGVGGLTVVKELMRQLPKEEIVYIGDTERCPYGPRPHDEIEAYTWELIE 63
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+L K + VIACNTA ++ E R P + A T++ I ++ T
Sbjct: 64 FLLKK-DVKMIVIACNTATAVVLKEARKRLDIPVIGVIDPGARAAVKGTRNKHIGVIGTK 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ + + ++ ++ VE + + +++ +E +
Sbjct: 123 MTIESGSYEKALRHVAGEVDVYSLACPPFVPLVEAGE----VSGERVRQVVEETLRPLQP 178
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDH 248
D ++L CTHYPL+ V + + V + + D A +L +H
Sbjct: 179 SEMDTLILGCTHYPLLAPVIQDVVGPDVHLISSGDETALEVAAMLDYQELENGLDAVPEH 238
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
A + +G ++ R + G
Sbjct: 239 AFYATGDIELFDRLASEWLG 258
>gi|194017293|ref|ZP_03055905.1| glutamate racemase [Bacillus pumilus ATCC 7061]
gi|194011161|gb|EDW20731.1| glutamate racemase [Bacillus pumilus ATCC 7061]
Length = 271
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 57/259 (22%), Positives = 106/259 (40%), Gaps = 5/259 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P+ IYV D PYG ++ + + + +
Sbjct: 1 MDQPIGVIDSGVGGLTVAKEIMRQLPKEKIIYVGDTKRCPYGPRKEEEVLQYTWEMAHYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + + VIACNTA + DE++ T P + A T + I ++ T T
Sbjct: 61 LRHHHIKMLVIACNTATAIALDEIKGTLDIPVIGVIQPGARTAIKVTNNQQIGVIGTANT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + S + + ++ +L VE + ++ +K +E +
Sbjct: 121 IKSEAYKEALLSLKAGLAVQSLACPLLVPFVESGTFLDQTADEVVKDSLE----PMKETG 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHAL 250
D ++L CTHYP++ ++ V + + D AR A +L T H
Sbjct: 177 IDTLILGCTHYPILKESIQRFMGSDVSIISSGDETAREASTILSYKGLLNTSKEAPVHTF 236
Query: 251 FLSGKPDIAMRRLMQGFGL 269
+ +G+ FG
Sbjct: 237 YTTGQQQNFENIARDWFGY 255
>gi|149183306|ref|ZP_01861747.1| glutamate racemase [Bacillus sp. SG-1]
gi|148848999|gb|EDL63208.1| glutamate racemase [Bacillus sp. SG-1]
Length = 266
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 63/260 (24%), Positives = 104/260 (40%), Gaps = 6/260 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I I DSG+GGL V +++ +P Y+ D PYG +KK +
Sbjct: 1 MDQPIGIIDSGVGGLTVAKEVMRQLPNETIFYLGDTARCPYGPRTAEEVKKFTWE-MAAF 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L Y + VIACNTA ++ +EL+ P P + A ++Q+G I +L T T
Sbjct: 60 LMNYNIKMLVIACNTATAVVLEELQDMLPIPVVGVIQPGARAALKHSQNGRIGVLGTVGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ IHS + ++ VE K D + + + +
Sbjct: 120 VNSKAYDKAIHSINDSIDVTSLACPKFVPLVESGEYESKWAVDIVNET----LVHMREEP 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHAL 250
D ++L CTHYPL+ + + + V +++ D AR +L + H
Sbjct: 176 IDTLILGCTHYPLLQPIVQTVMGQEVKVINSGDETAREVSAILDYQGMLNKKKAKPQHIF 235
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
F +G I + + LK
Sbjct: 236 FTTGSKRIFSKIALDWLQLK 255
>gi|189425888|ref|YP_001953065.1| glutamate racemase [Geobacter lovleyi SZ]
gi|189422147|gb|ACD96545.1| glutamate racemase [Geobacter lovleyi SZ]
Length = 275
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 66/256 (25%), Positives = 108/256 (42%), Gaps = 6/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I IFDSG+GGL VL+++ +P+ IY D PYG + + + S L
Sbjct: 4 QAIGIFDSGVGGLTVLRELTKALPQEDTIYFGDTARVPYGTKSPDTVIRYSQEIAS-FLI 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
K L V+ACNTA + LR + P P K+AA T+SG++ ++ T T+R
Sbjct: 63 KRDIKLLVVACNTASAVALPTLRRSLPVPVVGVIEPGAKRAAEVTRSGVVGVIGTSGTIR 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ S I + + E I D + E + D
Sbjct: 123 SSAYSRAIKRLNPDISVLAKPCPLFVPLAE----EGWIDNDVTRITARLYLEELREAQVD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALFL 252
+VL CTHYPL+ V ++ V +D+++ AR +L + + +H ++
Sbjct: 179 TLVLGCTHYPLLKKVIAEVMGPDVTLVDSAEETARTVATILQEKSMLRPPAELGNHHYYV 238
Query: 253 SGKPDIAMRRLMQGFG 268
+ P +R + G
Sbjct: 239 TDVPAGFIRVGNRFLG 254
>gi|229163447|ref|ZP_04291398.1| Glutamate racemase [Bacillus cereus R309803]
gi|228620016|gb|EEK76891.1| Glutamate racemase [Bacillus cereus R309803]
Length = 269
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 56/260 (21%), Positives = 105/260 (40%), Gaps = 6/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 1 MKLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWE-MT 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L + VIACNTA ++ +E++ P P + A T + + I+ T
Sbjct: 60 EHLLDLNIKMLVIACNTATAVVLEEMQKQLPIPVVGVIHPGSRTALKVTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE + + + + +
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVE----SGNFESEMAYEVVRETLQPLKR 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDH 248
D ++L CTHYP++ V + + V + + D AR +L DH
Sbjct: 176 TDIDTLILGCTHYPILGPVIKNVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK D+ + FG
Sbjct: 236 LFLTTGKIDLFKEIASKWFG 255
>gi|229175163|ref|ZP_04302679.1| Glutamate racemase [Bacillus cereus MM3]
gi|228608299|gb|EEK65605.1| Glutamate racemase [Bacillus cereus MM3]
Length = 274
Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats.
Identities = 55/260 (21%), Positives = 105/260 (40%), Gaps = 6/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 6 MKLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWE-MT 64
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L + VIACNTA ++ +E++ P P + A T + + I+ T
Sbjct: 65 EHLLDLNIKMLVIACNTATAVVLEEMQKQLPIPVVGVIHPGSRTALKVTNTYHVGIIGTI 124
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE + + + + +
Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVE----SGNFESEMAYEVVRETLQPLKN 180
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDH 248
D ++L CTHYP++ V +++ V + + D AR +L DH
Sbjct: 181 TDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 240
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 241 LFLTTGKIGLFKEIASKWFG 260
>gi|30264552|ref|NP_846929.1| glutamate racemase [Bacillus anthracis str. Ames]
gi|47530017|ref|YP_021366.1| glutamate racemase [Bacillus anthracis str. 'Ames Ancestor']
gi|49187374|ref|YP_030626.1| glutamate racemase [Bacillus anthracis str. Sterne]
gi|49478653|ref|YP_038536.1| glutamate racemase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|65321850|ref|ZP_00394809.1| COG0796: Glutamate racemase [Bacillus anthracis str. A2012]
gi|165871456|ref|ZP_02216103.1| glutamate racemase [Bacillus anthracis str. A0488]
gi|167635587|ref|ZP_02393899.1| glutamate racemase [Bacillus anthracis str. A0442]
gi|167641657|ref|ZP_02399902.1| glutamate racemase [Bacillus anthracis str. A0193]
gi|170688300|ref|ZP_02879510.1| glutamate racemase [Bacillus anthracis str. A0465]
gi|177653155|ref|ZP_02935442.1| glutamate racemase [Bacillus anthracis str. A0174]
gi|190567038|ref|ZP_03019954.1| glutamate racemase [Bacillus anthracis Tsiankovskii-I]
gi|196034413|ref|ZP_03101822.1| glutamate racemase [Bacillus cereus W]
gi|196039175|ref|ZP_03106481.1| glutamate racemase [Bacillus cereus NVH0597-99]
gi|196044858|ref|ZP_03112092.1| glutamate racemase [Bacillus cereus 03BB108]
gi|218905685|ref|YP_002453519.1| glutamate racemase [Bacillus cereus AH820]
gi|225866466|ref|YP_002751844.1| glutamate racemase [Bacillus cereus 03BB102]
gi|227817263|ref|YP_002817272.1| glutamate racemase [Bacillus anthracis str. CDC 684]
gi|228929530|ref|ZP_04092549.1| Glutamate racemase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|229602085|ref|YP_002868766.1| glutamate racemase [Bacillus anthracis str. A0248]
gi|254687028|ref|ZP_05150886.1| glutamate racemase [Bacillus anthracis str. CNEVA-9066]
gi|254724590|ref|ZP_05186373.1| glutamate racemase [Bacillus anthracis str. A1055]
gi|254736586|ref|ZP_05194292.1| glutamate racemase [Bacillus anthracis str. Western North America
USA6153]
gi|254741624|ref|ZP_05199311.1| glutamate racemase [Bacillus anthracis str. Kruger B]
gi|254754778|ref|ZP_05206813.1| glutamate racemase [Bacillus anthracis str. Vollum]
gi|254757610|ref|ZP_05209637.1| glutamate racemase [Bacillus anthracis str. Australia 94]
gi|254766106|sp|C1ETT1|MURI_BACC3 RecName: Full=Glutamate racemase
gi|30259210|gb|AAP28415.1| glutamate racemase [Bacillus anthracis str. Ames]
gi|47505165|gb|AAT33841.1| glutamate racemase [Bacillus anthracis str. 'Ames Ancestor']
gi|49181301|gb|AAT56677.1| glutamate racemase [Bacillus anthracis str. Sterne]
gi|49330209|gb|AAT60855.1| glutamate racemase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|164712753|gb|EDR18283.1| glutamate racemase [Bacillus anthracis str. A0488]
gi|167510364|gb|EDR85765.1| glutamate racemase [Bacillus anthracis str. A0193]
gi|167529007|gb|EDR91762.1| glutamate racemase [Bacillus anthracis str. A0442]
gi|170667806|gb|EDT18559.1| glutamate racemase [Bacillus anthracis str. A0465]
gi|172081679|gb|EDT66750.1| glutamate racemase [Bacillus anthracis str. A0174]
gi|190562029|gb|EDV15998.1| glutamate racemase [Bacillus anthracis Tsiankovskii-I]
gi|195992955|gb|EDX56914.1| glutamate racemase [Bacillus cereus W]
gi|196024346|gb|EDX63019.1| glutamate racemase [Bacillus cereus 03BB108]
gi|196029802|gb|EDX68403.1| glutamate racemase [Bacillus cereus NVH0597-99]
gi|218535114|gb|ACK87512.1| glutamate racemase [Bacillus cereus AH820]
gi|225786992|gb|ACO27209.1| glutamate racemase [Bacillus cereus 03BB102]
gi|227006462|gb|ACP16205.1| glutamate racemase [Bacillus anthracis str. CDC 684]
gi|228830109|gb|EEM75727.1| Glutamate racemase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|229266493|gb|ACQ48130.1| glutamate racemase [Bacillus anthracis str. A0248]
Length = 269
Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 56/260 (21%), Positives = 105/260 (40%), Gaps = 6/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 1 MKLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWE-MT 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L + VIACNTA ++ +E++ P P + A T + + I+ T
Sbjct: 60 EHLLDLNIKMLVIACNTATAVVLEEMQKQLPIPVVGVIHPGSRTALKVTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE + + + + +
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVE----SGNFESEMAYEVVRETLQPLKN 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDH 248
D ++L CTHYP++ V +Q+ V + + D AR +L DH
Sbjct: 176 TDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 236 LFLTTGKIGLFKEIASKWFG 255
>gi|118479648|ref|YP_896799.1| glutamate racemase [Bacillus thuringiensis str. Al Hakam]
gi|228917121|ref|ZP_04080679.1| Glutamate racemase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|228935802|ref|ZP_04098614.1| Glutamate racemase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228948207|ref|ZP_04110491.1| Glutamate racemase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|229093579|ref|ZP_04224680.1| Glutamate racemase [Bacillus cereus Rock3-42]
gi|229124023|ref|ZP_04253215.1| Glutamate racemase [Bacillus cereus 95/8201]
gi|229186725|ref|ZP_04313883.1| Glutamate racemase [Bacillus cereus BGSC 6E1]
gi|118418873|gb|ABK87292.1| glutamate racemase [Bacillus thuringiensis str. Al Hakam]
gi|228596738|gb|EEK54400.1| Glutamate racemase [Bacillus cereus BGSC 6E1]
gi|228659325|gb|EEL14973.1| Glutamate racemase [Bacillus cereus 95/8201]
gi|228689788|gb|EEL43594.1| Glutamate racemase [Bacillus cereus Rock3-42]
gi|228811565|gb|EEM57902.1| Glutamate racemase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228823859|gb|EEM69679.1| Glutamate racemase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228842539|gb|EEM87629.1| Glutamate racemase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
Length = 274
Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 56/260 (21%), Positives = 105/260 (40%), Gaps = 6/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 6 MKLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWE-MT 64
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L + VIACNTA ++ +E++ P P + A T + + I+ T
Sbjct: 65 EHLLDLNIKMLVIACNTATAVVLEEMQKQLPIPVVGVIHPGSRTALKVTNTYHVGIIGTI 124
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE + + + + +
Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVE----SGNFESEMAYEVVRETLQPLKN 180
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDH 248
D ++L CTHYP++ V +Q+ V + + D AR +L DH
Sbjct: 181 TDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 240
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 241 LFLTTGKIGLFKEIASKWFG 260
>gi|118579835|ref|YP_901085.1| glutamate racemase [Pelobacter propionicus DSM 2379]
gi|118502545|gb|ABK99027.1| glutamate racemase [Pelobacter propionicus DSM 2379]
Length = 272
Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 65/256 (25%), Positives = 108/256 (42%), Gaps = 6/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
SI IFDSG+GGL VL+++ MP+ IY D PYG + + + S L
Sbjct: 4 RSIGIFDSGVGGLTVLREIIKAMPQEDTIYFGDTARVPYGTKSPETVIRYAHEITS-FLV 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L V+ACNT + + L+ FP P K+A ++SG I ++ T T++
Sbjct: 63 RRDIKLLVVACNTVSAVALNGLKRHFPIPVVGVIEPGAKRAVEVSRSGRIGVIGTAGTIK 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ S I +Q + + + E I + + + + D
Sbjct: 123 SSAYSRAIKRLNAQAEVLTRACPLFVPLAE----EGWIDNQVARLTAQSYLQDLKEAGVD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALFL 252
+VL CTHYPL+ + + V +D+++ AR +L R + +H F+
Sbjct: 179 TLVLGCTHYPLLKPLICETMGPDVTLVDSAEETARSVAEILSRKKLLRPPSEKGNHHYFV 238
Query: 253 SGKPDIAMRRLMQGFG 268
S P +R + G
Sbjct: 239 SDVPAAFIRVGNRFLG 254
>gi|229158101|ref|ZP_04286171.1| Glutamate racemase [Bacillus cereus ATCC 4342]
gi|229198612|ref|ZP_04325314.1| Glutamate racemase [Bacillus cereus m1293]
gi|228584894|gb|EEK43010.1| Glutamate racemase [Bacillus cereus m1293]
gi|228625420|gb|EEK82177.1| Glutamate racemase [Bacillus cereus ATCC 4342]
Length = 274
Score = 259 bits (661), Expect = 4e-67, Method: Composition-based stats.
Identities = 56/260 (21%), Positives = 105/260 (40%), Gaps = 6/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 6 MKLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWE-MT 64
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L + VIACNTA ++ +E++ P P + A T + + I+ T
Sbjct: 65 EHLLDLNIKMLVIACNTATAVVLEEMQKQLPIPVVGVIHPGSRTALKMTNTYHVGIIGTI 124
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE + + + + +
Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVE----SGNFESEMAYEVVRETLQPLKN 180
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDH 248
D ++L CTHYP++ V +Q+ V + + D AR +L DH
Sbjct: 181 TDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 240
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 241 LFLTTGKIGLFKEIASKWFG 260
>gi|42783635|ref|NP_980882.1| glutamate racemase [Bacillus cereus ATCC 10987]
gi|206975961|ref|ZP_03236871.1| glutamate racemase [Bacillus cereus H3081.97]
gi|217961978|ref|YP_002340548.1| glutamate racemase [Bacillus cereus AH187]
gi|222097946|ref|YP_002532003.1| glutamate racemase [Bacillus cereus Q1]
gi|229141225|ref|ZP_04269764.1| Glutamate racemase [Bacillus cereus BDRD-ST26]
gi|47606713|sp|O31332|MURI_BACC1 RecName: Full=Glutamate racemase
gi|42739564|gb|AAS43490.1| glutamate racemase [Bacillus cereus ATCC 10987]
gi|206745713|gb|EDZ57110.1| glutamate racemase [Bacillus cereus H3081.97]
gi|217068220|gb|ACJ82470.1| glutamate racemase [Bacillus cereus AH187]
gi|221242004|gb|ACM14714.1| glutamate racemase [Bacillus cereus Q1]
gi|228642266|gb|EEK98558.1| Glutamate racemase [Bacillus cereus BDRD-ST26]
gi|324328386|gb|ADY23646.1| glutamate racemase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 269
Score = 259 bits (661), Expect = 4e-67, Method: Composition-based stats.
Identities = 56/260 (21%), Positives = 105/260 (40%), Gaps = 6/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 1 MKLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWE-MT 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L + VIACNTA ++ +E++ P P + A T + + I+ T
Sbjct: 60 EHLLDLNIKMLVIACNTATAVVLEEMQKQLPIPVVGVIHPGSRTALKMTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE + + + + +
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVE----SGNFESEMAYEVVRETLQPLKN 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDH 248
D ++L CTHYP++ V +Q+ V + + D AR +L DH
Sbjct: 176 TDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 236 LFLTTGKIGLFKEIASKWFG 255
>gi|229098955|ref|ZP_04229890.1| Glutamate racemase [Bacillus cereus Rock3-29]
gi|229117984|ref|ZP_04247344.1| Glutamate racemase [Bacillus cereus Rock1-3]
gi|228665433|gb|EEL20915.1| Glutamate racemase [Bacillus cereus Rock1-3]
gi|228684453|gb|EEL38396.1| Glutamate racemase [Bacillus cereus Rock3-29]
Length = 268
Score = 259 bits (661), Expect = 4e-67, Method: Composition-based stats.
Identities = 55/260 (21%), Positives = 105/260 (40%), Gaps = 6/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 1 MKLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWE-MT 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L + VIACNTA ++ +E++ P P + A T + + I+ T
Sbjct: 60 EHLLDLNIKMLVIACNTATAVVLEEMQKQLPIPVVGVIHPGSRTALKVTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE + + + + +
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVE----SGNFESEMAYEVVRETLQPLKN 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDH 248
D ++L CTHYP++ V +++ V + + D AR +L DH
Sbjct: 176 TDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 236 LFLTTGKIGLFKEIASKWFG 255
>gi|229032138|ref|ZP_04188115.1| Glutamate racemase [Bacillus cereus AH1271]
gi|228729194|gb|EEL80193.1| Glutamate racemase [Bacillus cereus AH1271]
Length = 274
Score = 259 bits (661), Expect = 4e-67, Method: Composition-based stats.
Identities = 55/260 (21%), Positives = 105/260 (40%), Gaps = 6/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 6 MKLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWE-MT 64
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L + VIACNTA ++ +E++ P P + A T + + I+ T
Sbjct: 65 EHLLDLNIKMLVIACNTATAVVLEEMQKQLPIPVVGVIHPGSRTALKVTNTYHVGIIGTI 124
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE + + + + +
Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVE----SGNFESEMAYEVVRETLQPLKN 180
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDH 248
D ++L CTHYP++ V +++ V + + D AR +L DH
Sbjct: 181 TDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 240
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 241 LFLTTGKIGLFKEIASKWFG 260
>gi|229105119|ref|ZP_04235770.1| Glutamate racemase [Bacillus cereus Rock3-28]
gi|228678300|gb|EEL32526.1| Glutamate racemase [Bacillus cereus Rock3-28]
Length = 273
Score = 259 bits (661), Expect = 4e-67, Method: Composition-based stats.
Identities = 55/260 (21%), Positives = 105/260 (40%), Gaps = 6/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 6 MKLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWE-MT 64
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L + VIACNTA ++ +E++ P P + A T + + I+ T
Sbjct: 65 EHLLDLNIKMLVIACNTATAVVLEEMQKQLPIPVVGVIHPGSRTALKVTNTYHVGIIGTI 124
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE + + + + +
Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVE----SGNFESEMAYEVVRETLQPLKN 180
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDH 248
D ++L CTHYP++ V +++ V + + D AR +L DH
Sbjct: 181 TDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 240
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 241 LFLTTGKIGLFKEIASKWFG 260
>gi|170708321|ref|ZP_02898765.1| glutamate racemase [Bacillus anthracis str. A0389]
gi|170126696|gb|EDS95579.1| glutamate racemase [Bacillus anthracis str. A0389]
Length = 269
Score = 259 bits (661), Expect = 4e-67, Method: Composition-based stats.
Identities = 56/260 (21%), Positives = 105/260 (40%), Gaps = 6/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 1 MKLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWE-MT 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L + VIACNTA ++ +E++ P P + A T + + I+ T
Sbjct: 60 EHLLDLNIKMLVIACNTATAVVLEEMQKQLPIPVVGVIHPGSRTALKVTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE + + + + +
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVE----SGDFESEMAYEVVRETLQPLKN 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDH 248
D ++L CTHYP++ V +Q+ V + + D AR +L DH
Sbjct: 176 TDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 236 LFLTTGKIGLFKEIASKWFG 255
>gi|2462097|emb|CAA71858.1| glutamate racemase [Bacillus cereus ATCC 14579]
Length = 258
Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats.
Identities = 55/263 (20%), Positives = 106/263 (40%), Gaps = 6/263 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 1 MKLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWE-MT 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L + VIACNTA ++ +E++ P P + A T + + I+ T
Sbjct: 60 EHLLDLNIKMLVIACNTATAVVLEEMQKQLPIPVVGVIHPGSRTALKVTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE + + + + +
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVE----SGNFESEMAYEVVRETLQPLKS 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDH 248
D ++L CTHYP++ V +++ V + + D AR +L DH
Sbjct: 176 TDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235
Query: 249 ALFLSGKPDIAMRRLMQGFGLKS 271
+GK + + FG +
Sbjct: 236 LFLTTGKIGLFKEIASKWFGRPA 258
>gi|228941671|ref|ZP_04104218.1| Glutamate racemase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228817883|gb|EEM63961.1| Glutamate racemase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|326942279|gb|AEA18175.1| glutamate racemase [Bacillus thuringiensis serovar chinensis CT-43]
Length = 269
Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats.
Identities = 55/260 (21%), Positives = 105/260 (40%), Gaps = 6/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 1 MKLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWE-MT 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L + VIACNTA ++ +E++ P P + A T + + I+ T
Sbjct: 60 EHLLDLNIKMLVIACNTATAVVLEEMQKQLPIPVVGVIHPGSRTALKVTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE + + + + +
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVE----SGNFESEMAYEVVRETLQPLKS 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDH 248
D ++L CTHYP++ V +++ V + + D AR +L DH
Sbjct: 176 TGIDTLILGCTHYPILGPVIKKVMGNKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 236 LFLTTGKIGLFKEIASKWFG 255
>gi|228974598|ref|ZP_04135164.1| Glutamate racemase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228981193|ref|ZP_04141493.1| Glutamate racemase [Bacillus thuringiensis Bt407]
gi|228778393|gb|EEM26660.1| Glutamate racemase [Bacillus thuringiensis Bt407]
gi|228785001|gb|EEM33014.1| Glutamate racemase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
Length = 274
Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats.
Identities = 55/260 (21%), Positives = 105/260 (40%), Gaps = 6/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 6 MKLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWE-MT 64
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L + VIACNTA ++ +E++ P P + A T + + I+ T
Sbjct: 65 EHLLDLNIKMLVIACNTATAVVLEEMQKQLPIPVVGVIHPGSRTALKVTNTYHVGIIGTI 124
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE + + + + +
Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVE----SGNFESEMAYEVVRETLQPLKS 180
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDH 248
D ++L CTHYP++ V +++ V + + D AR +L DH
Sbjct: 181 TGIDTLILGCTHYPILGPVIKKVMGNKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 240
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 241 LFLTTGKIGLFKEIASKWFG 260
>gi|56751751|ref|YP_172452.1| glutamate racemase [Synechococcus elongatus PCC 6301]
gi|81301170|ref|YP_401378.1| glutamate racemase [Synechococcus elongatus PCC 7942]
gi|56686710|dbj|BAD79932.1| glutamate racemase [Synechococcus elongatus PCC 6301]
gi|81170051|gb|ABB58391.1| glutamate racemase [Synechococcus elongatus PCC 7942]
Length = 289
Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats.
Identities = 55/271 (20%), Positives = 104/271 (38%), Gaps = 7/271 (2%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M I +FDSG+GGL VL++++ +P F+Y D PYG +
Sbjct: 1 MPPGAIFLHSSTAAPIGVFDSGVGGLTVLRELQRQLPHESFLYFGDTARLPYGTRSPAEI 60
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
++ + + + + L V+ACNT+ L + LR + PA + A +
Sbjct: 61 RQFVREILDWMQAE-GCKLVVMACNTSSALALEALRGDYTMPLIGLIQPAARVAVQ--RG 117
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I +++T AT + + + + VE+ +I + + +
Sbjct: 118 QRIGVIATAATAQSRAYRQALREANPNVQVWEIGCPEFVPLVEQQ----RIHDPQTLQVA 173
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ D ++ CTHYP + V +QL P LD ++++ R + L +
Sbjct: 174 AQYLAPLIEAQVDTLIYGCTHYPHLAPVIQQLLPSSTHLLDPAEAVTRSVQMELEVLGLS 233
Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
T +S P + + G ++
Sbjct: 234 HTSKASTVRFCVSHDPQHFSLAIERWLGFQA 264
>gi|152976904|ref|YP_001376421.1| glutamate racemase [Bacillus cereus subsp. cytotoxis NVH 391-98]
gi|152025656|gb|ABS23426.1| glutamate racemase [Bacillus cytotoxicus NVH 391-98]
Length = 267
Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats.
Identities = 53/258 (20%), Positives = 106/258 (41%), Gaps = 6/258 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +I + DSG+GGL V +++ +P+ IY+ D PYG +++ ++
Sbjct: 1 MNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWE-MTEY 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + VIACNTA ++ +E++ P P + A T + + ++ T T
Sbjct: 60 LLALNIKMLVIACNTATAVVLEEMQKQLPIPVVGVIHPGSRTALKVTNTCHVGVIGTIGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + + S ++ + ++ VE + + + + +
Sbjct: 120 VKSGAYEDALKSINNRVMVESLACPPFVELVE----SGNFESEMAYEVVRETLQPLKHTE 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHAL 250
D ++L CTHYP++ V +++ V + + D AR +L DH
Sbjct: 176 IDTLILGCTHYPILGPVIKRVMGEKVQLISSGDETAREVSTILYHSKMLNEGEEQSDHLF 235
Query: 251 FLSGKPDIAMRRLMQGFG 268
+GK D+ + FG
Sbjct: 236 LTTGKIDLFKEIASKWFG 253
>gi|228987734|ref|ZP_04147845.1| Glutamate racemase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|228772008|gb|EEM20463.1| Glutamate racemase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
Length = 269
Score = 258 bits (659), Expect = 6e-67, Method: Composition-based stats.
Identities = 56/260 (21%), Positives = 105/260 (40%), Gaps = 6/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 1 MKLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWE-MT 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L + VIACNTA ++ +E++ P P + A T + + I+ T
Sbjct: 60 EHLLDLNIKMLVIACNTATAVVLEEMQKQLPIPVVGVIHPGSRTALKMTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE + + + + +
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVE----SGNFESEMAYEVVRETLQPLKK 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDH 248
D ++L CTHYP++ V +Q+ V + + D AR +L DH
Sbjct: 176 TDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 236 LFLTTGKIGLFKEIASKWFG 255
>gi|228967586|ref|ZP_04128610.1| Glutamate racemase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|229081749|ref|ZP_04214242.1| Glutamate racemase [Bacillus cereus Rock4-2]
gi|229129779|ref|ZP_04258746.1| Glutamate racemase [Bacillus cereus BDRD-Cer4]
gi|229152686|ref|ZP_04280874.1| Glutamate racemase [Bacillus cereus m1550]
gi|228630832|gb|EEK87473.1| Glutamate racemase [Bacillus cereus m1550]
gi|228653695|gb|EEL09566.1| Glutamate racemase [Bacillus cereus BDRD-Cer4]
gi|228701594|gb|EEL54087.1| Glutamate racemase [Bacillus cereus Rock4-2]
gi|228792110|gb|EEM39688.1| Glutamate racemase [Bacillus thuringiensis serovar sotto str.
T04001]
Length = 274
Score = 258 bits (659), Expect = 6e-67, Method: Composition-based stats.
Identities = 55/260 (21%), Positives = 105/260 (40%), Gaps = 6/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 6 MKLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWE-MT 64
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L + VIACNTA ++ +E++ P P + A T + + I+ T
Sbjct: 65 EHLLDLNIKMLVIACNTATAVVLEEMQKQLPIPVVGVIHPGSRTALKVTNTYHVGIIGTI 124
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE + + + + +
Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVE----SGNFESEMAYEVVRETLQPLKS 180
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDH 248
D ++L CTHYP++ V +++ V + + D AR +L DH
Sbjct: 181 TDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 240
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 241 LFLTTGKIGLFKEIASKWFG 260
>gi|30022575|ref|NP_834206.1| glutamate racemase [Bacillus cereus ATCC 14579]
gi|206969797|ref|ZP_03230751.1| glutamate racemase [Bacillus cereus AH1134]
gi|218233554|ref|YP_002369290.1| glutamate racemase [Bacillus cereus B4264]
gi|218899650|ref|YP_002448061.1| glutamate racemase [Bacillus cereus G9842]
gi|228910317|ref|ZP_04074134.1| Glutamate racemase [Bacillus thuringiensis IBL 200]
gi|229048200|ref|ZP_04193769.1| Glutamate racemase [Bacillus cereus AH676]
gi|229072001|ref|ZP_04205211.1| Glutamate racemase [Bacillus cereus F65185]
gi|229111955|ref|ZP_04241499.1| Glutamate racemase [Bacillus cereus Rock1-15]
gi|229147053|ref|ZP_04275413.1| Glutamate racemase [Bacillus cereus BDRD-ST24]
gi|229180762|ref|ZP_04308100.1| Glutamate racemase [Bacillus cereus 172560W]
gi|229192695|ref|ZP_04319654.1| Glutamate racemase [Bacillus cereus ATCC 10876]
gi|296504971|ref|YP_003666671.1| glutamate racemase [Bacillus thuringiensis BMB171]
gi|226722979|sp|B7IIZ3|MURI_BACC2 RecName: Full=Glutamate racemase
gi|226722980|sp|B7HEB5|MURI_BACC4 RecName: Full=Glutamate racemase
gi|29898133|gb|AAP11407.1| Glutamate racemase [Bacillus cereus ATCC 14579]
gi|206735485|gb|EDZ52653.1| glutamate racemase [Bacillus cereus AH1134]
gi|218161511|gb|ACK61503.1| glutamate racemase [Bacillus cereus B4264]
gi|218541324|gb|ACK93718.1| glutamate racemase [Bacillus cereus G9842]
gi|228590785|gb|EEK48645.1| Glutamate racemase [Bacillus cereus ATCC 10876]
gi|228602740|gb|EEK60223.1| Glutamate racemase [Bacillus cereus 172560W]
gi|228636441|gb|EEK92911.1| Glutamate racemase [Bacillus cereus BDRD-ST24]
gi|228671519|gb|EEL26819.1| Glutamate racemase [Bacillus cereus Rock1-15]
gi|228711160|gb|EEL63125.1| Glutamate racemase [Bacillus cereus F65185]
gi|228723187|gb|EEL74563.1| Glutamate racemase [Bacillus cereus AH676]
gi|228849377|gb|EEM94214.1| Glutamate racemase [Bacillus thuringiensis IBL 200]
gi|296326023|gb|ADH08951.1| glutamate racemase [Bacillus thuringiensis BMB171]
Length = 269
Score = 258 bits (659), Expect = 6e-67, Method: Composition-based stats.
Identities = 55/260 (21%), Positives = 105/260 (40%), Gaps = 6/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 1 MKLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWE-MT 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L + VIACNTA ++ +E++ P P + A T + + I+ T
Sbjct: 60 EHLLDLNIKMLVIACNTATAVVLEEMQKQLPIPVVGVIHPGSRTALKVTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE + + + + +
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVE----SGNFESEMAYEVVRETLQPLKS 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDH 248
D ++L CTHYP++ V +++ V + + D AR +L DH
Sbjct: 176 TDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 236 LFLTTGKIGLFKEIASKWFG 255
>gi|228954765|ref|ZP_04116787.1| Glutamate racemase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|228804963|gb|EEM51560.1| Glutamate racemase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
Length = 269
Score = 258 bits (659), Expect = 6e-67, Method: Composition-based stats.
Identities = 55/260 (21%), Positives = 105/260 (40%), Gaps = 6/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 1 MKLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRRFTWE-MT 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L + VIACNTA ++ +E++ P P + A T + + I+ T
Sbjct: 60 EHLLNLNIKMLVIACNTATAVVLEEMQKQLPIPVVGVIHPGSRTALKVTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE + + + + +
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVE----SGNFESEMAYEVVRETLQPLKS 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDH 248
D ++L CTHYP++ V +++ V + + D AR +L DH
Sbjct: 176 TDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 236 LFLTTGKIGLFKEIASKWFG 255
>gi|330975580|gb|EGH75646.1| glutamate racemase [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 271
Score = 258 bits (659), Expect = 7e-67, Method: Composition-based stats.
Identities = 70/251 (27%), Positives = 117/251 (46%), Gaps = 5/251 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ IFDSG+GGL VL ++R L+P +Y+AD PYG + +R + +
Sbjct: 11 DAPVGIFDSGVGGLSVLNEVRQLLPSESLLYLADCGHIPYGEKTPEFIIERCLTIAGFFR 70
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA LR +P +G PA+K AA T+SG++ +L+T TL
Sbjct: 71 -EQGAKALVVACNTATAAGVSHLRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTL 129
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + + + L +E + +I++ ++ R
Sbjct: 130 QSARFAALLDRFANDVRVVTQPCPGLVELIET----GDLLSPQIRQLLQHYVEPLLAARC 185
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D I+L CTHYP + + R++ P V +D ++AR+ + LL R + V D +
Sbjct: 186 DTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLARSGLLASGVSRDTVYWS 245
Query: 253 SGKPDIAMRRL 263
S PD + L
Sbjct: 246 SDIPDNFRKIL 256
>gi|289678403|ref|ZP_06499293.1| glutamate racemase [Pseudomonas syringae pv. syringae FF5]
gi|330900878|gb|EGH32297.1| glutamate racemase [Pseudomonas syringae pv. japonica str.
M301072PT]
Length = 271
Score = 258 bits (659), Expect = 7e-67, Method: Composition-based stats.
Identities = 70/251 (27%), Positives = 117/251 (46%), Gaps = 5/251 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ IFDSG+GGL VL ++R L+P +Y+AD PYG + +R + +
Sbjct: 11 DAPVGIFDSGVGGLSVLNEVRQLLPSESLLYLADCGHIPYGEKTPEFIIERCLTIAGFFR 70
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA LR +P +G PA+K AA T+SG++ +L+T TL
Sbjct: 71 -EQGAKALVVACNTATAAGVSHLRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTL 129
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + + + L +E + +I++ ++ R
Sbjct: 130 QSARFAALLDRFANDVRVVTQPCPGLVELIET----GDLLSPQIRQLLQHYVEPLLAARC 185
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D I+L CTHYP + + R++ P V +D ++AR+ + LL R + V D +
Sbjct: 186 DTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLARSGLLASGVSRDTVYWS 245
Query: 253 SGKPDIAMRRL 263
S PD + L
Sbjct: 246 SDIPDNFRKIL 256
>gi|66044205|ref|YP_234046.1| glutamate racemase [Pseudomonas syringae pv. syringae B728a]
gi|63254912|gb|AAY36008.1| Glutamate racemase [Pseudomonas syringae pv. syringae B728a]
gi|330972817|gb|EGH72883.1| glutamate racemase [Pseudomonas syringae pv. aceris str. M302273PT]
Length = 271
Score = 258 bits (659), Expect = 7e-67, Method: Composition-based stats.
Identities = 69/251 (27%), Positives = 117/251 (46%), Gaps = 5/251 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ IFDSG+GGL VL ++R L+P +Y+AD PYG + +R + +
Sbjct: 11 DAPVGIFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTPEFIIERCLTIAGFFR 70
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA +R +P +G PA+K AA T+SG++ +L+T TL
Sbjct: 71 -EQGAKALVVACNTATAAGVSHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTL 129
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + + + L +E + +I++ ++ R
Sbjct: 130 QSARFAALLDRFANDVRVVTQPCPGLVELIET----GDLVSPQIRQLLQHYVEPLLAARC 185
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D I+L CTHYP + + R++ P V +D ++AR+ + LL R + V D +
Sbjct: 186 DTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLTRSGLLASGVARDTVYWS 245
Query: 253 SGKPDIAMRRL 263
S PD + L
Sbjct: 246 SDIPDNFRKIL 256
>gi|157693253|ref|YP_001487715.1| glutamate racemase [Bacillus pumilus SAFR-032]
gi|167017314|sp|A8FFY8|MURI_BACP2 RecName: Full=Glutamate racemase
gi|157682011|gb|ABV63155.1| glutamate racemase [Bacillus pumilus SAFR-032]
Length = 272
Score = 258 bits (659), Expect = 7e-67, Method: Composition-based stats.
Identities = 57/259 (22%), Positives = 108/259 (41%), Gaps = 5/259 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L I + DSG+GGL V +++ +P+ IYV D PYG ++ + + + +
Sbjct: 2 LDQPIGVIDSGVGGLTVAKEIMRQLPKEKIIYVGDTKRCPYGPRKEEEVLQYTWEMAHYL 61
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + + VIACNTA + DE+++T P + A T + I ++ T T
Sbjct: 62 LRHHHIKMLVIACNTATAIALDEIKATLDIPVIGVIQPGARTAIKVTNNQQIGVIGTANT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + S + + ++ +L VE + ++ +K +E +
Sbjct: 122 IKSEAYKEALLSLKAGLAVQSLACPLLVPFVESGTFLDQTADEVVKDSLE----PMKETG 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHAL 250
D ++L CTHYP++ ++ V + + D AR A +L ++ H
Sbjct: 178 IDTLILGCTHYPILKESIQRFMGSDVSIISSGDETAREASTILSYKGLLNTSQEAPVHTF 237
Query: 251 FLSGKPDIAMRRLMQGFGL 269
+ +G+ FG
Sbjct: 238 YTTGQQQNFENIARDWFGY 256
>gi|228903012|ref|ZP_04067151.1| Glutamate racemase [Bacillus thuringiensis IBL 4222]
gi|228856605|gb|EEN01126.1| Glutamate racemase [Bacillus thuringiensis IBL 4222]
Length = 269
Score = 258 bits (659), Expect = 7e-67, Method: Composition-based stats.
Identities = 55/260 (21%), Positives = 105/260 (40%), Gaps = 6/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 1 MKLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWE-MT 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L + VIACNTA ++ +E++ P P + A T + + I+ T
Sbjct: 60 EHLLDLNIKMLVIACNTATAVVLEEMQKQLPIPVVGVIHPGSRTALKVTNTYQVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE + + + + +
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVE----SGNFESEMAYEVVRETLQPLKS 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDH 248
D ++L CTHYP++ V +++ V + + D AR +L DH
Sbjct: 176 TDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 236 LFLTTGKIGLFKEIASKWFG 255
>gi|75760743|ref|ZP_00740765.1| Glutamate racemase [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|74491771|gb|EAO54965.1| Glutamate racemase [Bacillus thuringiensis serovar israelensis ATCC
35646]
Length = 274
Score = 258 bits (659), Expect = 7e-67, Method: Composition-based stats.
Identities = 55/260 (21%), Positives = 105/260 (40%), Gaps = 6/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 6 MKLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWE-MT 64
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L + VIACNTA ++ +E++ P P + A T + + I+ T
Sbjct: 65 EHLLDLNIKMLVIACNTATAVVLEEMQKQLPIPVVGVIHPGSRTALKVTNTYQVGIIGTI 124
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE + + + + +
Sbjct: 125 GTVKSGAYEEALKSINNRVMVESLACPPFVELVE----SGNFESEMAYEVVRETLQPLKS 180
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDH 248
D ++L CTHYP++ V +++ V + + D AR +L DH
Sbjct: 181 TDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 240
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 241 LFLTTGKIGLFKEIASKWFG 260
>gi|228960759|ref|ZP_04122398.1| Glutamate racemase [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|228798975|gb|EEM45950.1| Glutamate racemase [Bacillus thuringiensis serovar pakistani str.
T13001]
Length = 269
Score = 257 bits (658), Expect = 8e-67, Method: Composition-based stats.
Identities = 55/260 (21%), Positives = 105/260 (40%), Gaps = 6/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 1 MKLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWE-MT 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L + VIACNTA ++ +E++ P P + A T + + I+ T
Sbjct: 60 EHLLDLNIKMLVIACNTATAVVLEEMQKKLPIPVVGVIHPGSRTALKVTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE + + + + +
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVE----SGNFESEMAYEVVRETLQPLKS 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDH 248
D ++L CTHYP++ V +++ V + + D AR +L DH
Sbjct: 176 TDIDTLILGCTHYPILGPVIKKVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 236 LFLTTGKIGLFKEIASKWFG 255
>gi|253573241|ref|ZP_04850584.1| glutamate racemase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251846769|gb|EES74774.1| glutamate racemase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 272
Score = 257 bits (658), Expect = 9e-67, Method: Composition-based stats.
Identities = 59/260 (22%), Positives = 104/260 (40%), Gaps = 6/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+Q +I I DSG+GGL V +++ +P IY D PYG ++ +
Sbjct: 1 MFVQQAIAILDSGVGGLTVCKEVMRQLPREKIIYFGDTARAPYGPRSPEEVRLFTEQIVD 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L ++ P + VIACNTA D +++ P + A + T++G + ++ T
Sbjct: 61 -YLIQFHPKMIVIACNTATAAALDFIKAKVDIPVIGVIHPGARAAISETKTGKVGVIGTV 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+R + + Q I + VE E +E E +
Sbjct: 120 GTIRSGAYTVALRELNPQTEIVSEACPEFVPLVEHGLYE----TKEALHVVERSLREMKK 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248
+ D ++L CTHYP + +++ V + ++D AR +L + + H
Sbjct: 176 QPMDCLILGCTHYPFLKDPIQRVMGPNVKLISSADETAREISTILHQRGCLARGNGTPVH 235
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
F SG ++ + Q G
Sbjct: 236 QFFCSGDAEMFRKIARQWLG 255
>gi|163942231|ref|YP_001647115.1| glutamate racemase [Bacillus weihenstephanensis KBAB4]
gi|163864428|gb|ABY45487.1| glutamate racemase [Bacillus weihenstephanensis KBAB4]
Length = 267
Score = 257 bits (658), Expect = 1e-66, Method: Composition-based stats.
Identities = 53/258 (20%), Positives = 104/258 (40%), Gaps = 6/258 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +I + DSG+GGL V +++ +P+ IY+ D PYG +++ ++
Sbjct: 1 MNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWE-MTEH 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + VIACNTA ++ +E++ P P + A T + + I+ T T
Sbjct: 60 LLDLNIKMLVIACNTATAVVLEEMQKQLPIPVVGVIHPGSRTALKVTNTYHVGIIGTIGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + S ++ + ++ VE + + + + +
Sbjct: 120 VKSGAYEEALKSINNRVMVESLACPPFVELVE----SGNFESEMAYEVVRETLQPLKSTD 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHAL 250
D ++L CTHYP++ V +++ V + + D AR +L DH
Sbjct: 176 IDTLILGCTHYPILGPVIKKVMGDQVQLISSGDETAREVSTILYHSKMLNEGEEQSDHLF 235
Query: 251 FLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 236 LTTGKIGLFKEIASKWFG 253
>gi|302390710|ref|YP_003826531.1| glutamate racemase [Thermosediminibacter oceani DSM 16646]
gi|302201338|gb|ADL08908.1| glutamate racemase [Thermosediminibacter oceani DSM 16646]
Length = 273
Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats.
Identities = 62/258 (24%), Positives = 100/258 (38%), Gaps = 6/258 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ I IFDSGIGGL V +++ +P + +Y D PYG+ + + +
Sbjct: 3 TNERPIGIFDSGIGGLTVAREIMNHLPGENLVYFGDTARVPYGSKSKETITRFAFEGVN- 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L K + VIACNT DEL+ P P + A T +G++ ++ T
Sbjct: 62 FLMKQAVKMIVIACNTVSATCLDELQQAVPVPVVGVIEPGARAAVNATVNGVVGVIGTER 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ IH S I + + VE + + + +
Sbjct: 122 TINSGAYIKAIHRLNSSIKIFSRACPMFVPLVE----EGWLDNEAAVFAARTYLGPLKKE 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHA 249
D +VLACTHYPL+ R++ V +D++ AR LL + +T +
Sbjct: 178 GIDTLVLACTHYPLLKPTLRKVMGDQVFLVDSAMETAREVARLLREKSLARTGGGPATYR 237
Query: 250 LFLSGKPDIAMRRLMQGF 267
F+S P +
Sbjct: 238 YFVSDNPAKFKEVGERFL 255
>gi|38174839|emb|CAD70220.1| glutamate racemase [Microcystis aeruginosa PCC 7806]
gi|159027640|emb|CAO89504.1| murI [Microcystis aeruginosa PCC 7806]
Length = 270
Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 106/258 (41%), Gaps = 8/258 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I +FDSG+GGL VL+++ +P+ +Y AD PYG + + + + + +
Sbjct: 7 SPIGVFDSGVGGLTVLRELYKQLPQESILYFADTARLPYGTRSKGEIIEFVREILTWM-G 65
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
+++ + ++ACNT+ L +E+R+ F + LG + P K A + I ++STPAT
Sbjct: 66 EHRVKMVIMACNTSSALALEEVRAEFKDLPILGVILPGAKTAVKQGK--RIGVISTPATA 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I + + +E ++ +
Sbjct: 124 KSNAYKQAIQEIDPTAQVWQIPCPEFVPLIEANRIFDPYTTQVARE----YLQPLLAENI 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +V CTHY + V R+L P V +D + ++ R A L + +
Sbjct: 180 DTLVYGCTHYRHLSPVLRRLLPSSVRLVDPAAAVVRAAEKELELLGLKNPETSLPTNFAV 239
Query: 253 SGKPDIAMRRLMQGFGLK 270
SG PD R Q G
Sbjct: 240 SGDPDTFARLSRQWLGFS 257
>gi|294501442|ref|YP_003565142.1| glutamate racemase [Bacillus megaterium QM B1551]
gi|294351379|gb|ADE71708.1| glutamate racemase [Bacillus megaterium QM B1551]
Length = 264
Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats.
Identities = 51/257 (19%), Positives = 105/257 (40%), Gaps = 6/257 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P+ +Y+ D PYG ++ ++
Sbjct: 1 MSRPIGVIDSGVGGLTVAKEIMRQLPKEQIMYIGDTARCPYGPRPSEEVRAFTWE-MTNY 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + VIACNTA ++ DE++ P + A T++ I ++ T T
Sbjct: 60 LVGKDIKMLVIACNTATAVVLDEIQEQLDIPVIGVIEPGSRAALKVTKNHKIGVIGTNGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ ++ + + ++ + ++ + VE E ++ ++
Sbjct: 120 VKSQAYTHALRALHTRVEVENLACPLFVPLVESGNYEG----PEAQRIVKETLKPFYHTD 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHAL 250
D ++L CTHYPL+ V ++ V + + + A +L N R +H
Sbjct: 176 MDTLILGCTHYPLLKPVIQEAIGPRVQLISSGEETAIEVSAILSYSNLLAPRNMEPEHYF 235
Query: 251 FLSGKPDIAMRRLMQGF 267
F +G ++ + F
Sbjct: 236 FTTGSTELFQSIASKWF 252
>gi|149241773|pdb|2GZM|A Chain A, Crystal Structure Of The Glutamate Racemase From Bacillus
Anthracis
gi|149241774|pdb|2GZM|B Chain B, Crystal Structure Of The Glutamate Racemase From Bacillus
Anthracis
gi|149241775|pdb|2GZM|C Chain C, Crystal Structure Of The Glutamate Racemase From Bacillus
Anthracis
gi|149241776|pdb|2GZM|D Chain D, Crystal Structure Of The Glutamate Racemase From Bacillus
Anthracis
Length = 267
Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats.
Identities = 56/259 (21%), Positives = 105/259 (40%), Gaps = 6/259 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ ++
Sbjct: 1 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWE-MTE 59
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L + VIACNTA ++ +E++ P P + A T + + I+ T
Sbjct: 60 HLLDLNIKMLVIACNTATAVVLEEMQKQLPIPVVGVIHPGSRTALKVTNTYHVGIIGTIG 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + S ++ + ++ VE + + + + +
Sbjct: 120 TVKSGAYEEALKSINNRVMVESLACPPFVELVE----SGNFESEMAYEVVRETLQPLKNT 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHA 249
D ++L CTHYP++ V +Q+ V + + D AR +L DH
Sbjct: 176 DIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDHL 235
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 236 FLTTGKIGLFKEIASKWFG 254
>gi|301055994|ref|YP_003794205.1| glutamate racemase [Bacillus anthracis CI]
gi|300378163|gb|ADK07067.1| glutamate racemase [Bacillus cereus biovar anthracis str. CI]
Length = 267
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 54/258 (20%), Positives = 103/258 (39%), Gaps = 6/258 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +I + DSG+GGL V +++ +P+ IY+ D PYG +++ ++
Sbjct: 1 MNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWE-MTEH 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + VIACNTA ++ +E++ P P + A T + + I+ T T
Sbjct: 60 LLDLNIKMLVIACNTATAVVLEEMQKQLPIPVVGVIHPGSRTALKVTNTYHVGIIGTIGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + S ++ + + VE + + + + +
Sbjct: 120 VKSGAYEEALKSINNRVMVESFACPPFVELVE----SGNFESEMAYEVVRETLQPLKNTD 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHAL 250
D ++L CTHYP++ V +Q+ V + + D AR +L DH
Sbjct: 176 IDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDHLF 235
Query: 251 FLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 236 LTTGKIGLFKEIASKWFG 253
>gi|104780103|ref|YP_606601.1| glutamate racemase [Pseudomonas entomophila L48]
gi|166231049|sp|Q1IEW8|MURI_PSEE4 RecName: Full=Glutamate racemase
gi|95109090|emb|CAK13787.1| glutamate racemase [Pseudomonas entomophila L48]
Length = 265
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 68/255 (26%), Positives = 118/255 (46%), Gaps = 5/255 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I + DSG+GGL VL +++ L+P +YVAD PYG +++RL + L
Sbjct: 5 SAPIGVMDSGVGGLSVLAEIQRLLPNETLLYVADSGHVPYGEKSPDYIRQRLRHIAG-FL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA +LR+ +P +G PA+K AAA T+SG++ +L+T TL
Sbjct: 64 REQGAKAMVLACNTATVATVADLRALYPDWPLVGMEPAVKPAAAATRSGVVGVLATTGTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + S + L +E + +++ + G +
Sbjct: 124 QSAKFAALLDRFASDVRVITQPCPGLVECIE----AGDLTSPALRQLLAGYVQPLLAQGC 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP + + + P V +D ++AR+ + LL + + A +
Sbjct: 180 DTLILGCTHYPFLRPMLADMVPADVAIIDTGAAVARQLQRLLGERDLLADGPARETAFWT 239
Query: 253 SGKPDIAMRRLMQGF 267
S PD + L +
Sbjct: 240 SADPDSLKKILPMLW 254
>gi|52141014|ref|YP_085815.1| glutamate racemase [Bacillus cereus E33L]
gi|81686030|sp|Q633V2|MURI_BACCZ RecName: Full=Glutamate racemase
gi|51974483|gb|AAU16033.1| glutamate racemase [Bacillus cereus E33L]
Length = 269
Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats.
Identities = 56/260 (21%), Positives = 105/260 (40%), Gaps = 6/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 1 MKLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTERCPYGPRSREEVRQFTWE-MT 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L + VIACNTA ++ +E++ P P + A T + + I+ T
Sbjct: 60 EHLLDLNIKMLVIACNTATAVVLEEMQKQLPIPVVGVIHPGSRTALKMTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE + + + + +
Sbjct: 120 GTVKSGAYEEALKSINNRVVVESLACPPFVELVE----SGNFESEMAYEVVRETLQPLKN 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDH 248
D ++L CTHYP++ V +Q+ V + + D AR +L DH
Sbjct: 176 TDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 236 LFLTTGKIGLFKEIASKWFG 255
>gi|319651762|ref|ZP_08005888.1| glutamate racemase [Bacillus sp. 2_A_57_CT2]
gi|317396581|gb|EFV77293.1| glutamate racemase [Bacillus sp. 2_A_57_CT2]
Length = 264
Score = 257 bits (656), Expect = 2e-66, Method: Composition-based stats.
Identities = 56/258 (21%), Positives = 103/258 (39%), Gaps = 6/258 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I I DSG+GGL V +++ +P +Y+ D PYG +K +
Sbjct: 1 MKQPIGIIDSGVGGLTVAKEIMRQLPNEDIVYLGDTARCPYGPRPGDEVKSFTWQ-MTKY 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + + +IACNTA + +E+R P + A T++ I ++ T T
Sbjct: 60 LLERNIKMLIIACNTATAVALEEIRRELTIPVIGVIFPGARTAIKVTKNHKIGVIGTEGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R N + + +H ++ VE + KK + +GK
Sbjct: 120 VRSKAYENALIQLNRRSDVHSLACPKFVPLVESGEYEGSV----AKKIVAETLQPIKGKG 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D ++L CTHYPL+ + + + V+ + + + AR A +L + ++
Sbjct: 176 MDTLILGCTHYPLLEPIIKNVMGKGVNVISSGEETAREASTILHHYGMLKAVAENPEYKF 235
Query: 251 FLSGKPDIAMRRLMQGFG 268
+G I + G
Sbjct: 236 CTTGSTAIFSKIASTWLG 253
>gi|295706790|ref|YP_003599865.1| glutamate racemase [Bacillus megaterium DSM 319]
gi|294804449|gb|ADF41515.1| glutamate racemase [Bacillus megaterium DSM 319]
Length = 264
Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats.
Identities = 51/257 (19%), Positives = 105/257 (40%), Gaps = 6/257 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P+ +Y+ D PYG ++ ++
Sbjct: 1 MSRPIGVIDSGVGGLTVAKEIMRQLPKEQIMYIGDTARCPYGPRPSEEVRAFTWE-MTNY 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + VIACNTA ++ DE++ P + A T++ I ++ T T
Sbjct: 60 LIAKDIKMLVIACNTATAVVLDEIQEQLDIPVIGVIEPGSRAALKVTKNHKIGVIGTNGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ ++ + + ++ + ++ + VE E ++ ++
Sbjct: 120 VKSQAYTHALRALHTRVEVENLACPLFVPLVESGNYEG----PEAQRIVKETLKPFYHTD 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHAL 250
D ++L CTHYPL+ V ++ V + + + A +L N R +H
Sbjct: 176 MDTLILGCTHYPLLKPVIQEAIGPRVQLISSGEETAIEVSAILSYSNLLAPRNMEPEHYF 235
Query: 251 FLSGKPDIAMRRLMQGF 267
F +G ++ + F
Sbjct: 236 FTTGSTELFQSIASKWF 252
>gi|330951099|gb|EGH51359.1| glutamate racemase [Pseudomonas syringae Cit 7]
Length = 271
Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats.
Identities = 70/251 (27%), Positives = 118/251 (47%), Gaps = 5/251 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ IFDSG+GGL VL ++R L+P +Y+AD PYG + +R + +
Sbjct: 11 DAPVGIFDSGVGGLSVLNEVRQLLPSESLLYLADCGHIPYGEKTPEFIIERCLTIAGFFR 70
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA +R +P +G PA+K AA T+SG++ +L+T TL
Sbjct: 71 -EQGAKALVVACNTATAAGVSHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTL 129
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + + + L +E + +I++ ++ R
Sbjct: 130 QSARFAALLDRFANDVRVVTQPCPGLVELIET----GDLVSPQIRQLLQHYVEPLLAARC 185
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D I+L CTHYP + + RQ+ P V +D ++AR+ + LL R + + V D +
Sbjct: 186 DTIILGCTHYPFLKPLLRQMLPESVTLIDTGAAVARQLQRLLARSDLLASGVARDTVYWS 245
Query: 253 SGKPDIAMRRL 263
S PD + L
Sbjct: 246 SDIPDNFRKIL 256
>gi|229019709|ref|ZP_04176516.1| Glutamate racemase [Bacillus cereus AH1273]
gi|229027350|ref|ZP_04183605.1| Glutamate racemase [Bacillus cereus AH1272]
gi|228733958|gb|EEL84697.1| Glutamate racemase [Bacillus cereus AH1272]
gi|228741616|gb|EEL91809.1| Glutamate racemase [Bacillus cereus AH1273]
Length = 274
Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats.
Identities = 55/259 (21%), Positives = 105/259 (40%), Gaps = 6/259 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ ++
Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWE-MTE 65
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L + VIACNTA ++ +E++ P P + A T + + I+ T
Sbjct: 66 HLLDLNIKMLVIACNTATAVVLEEMQKQLPIPVVGVIHPGSRTALKVTNTYHVGIIGTIG 125
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + S ++ + ++ VE + + + + +
Sbjct: 126 TVKSGAYEEALKSINNRVMVESLACPPFVELVE----SGNFESEMAYEVVRETLQPLKST 181
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHA 249
D ++L CTHYP++ V +++ V + + D AR +L DH
Sbjct: 182 DIDTLILGCTHYPILGPVIKKVMGDQVQLISSGDETAREVSTILYHSKMLNEGEEQSDHL 241
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 242 FLTTGKIGLFKEIASKWFG 260
>gi|229062177|ref|ZP_04199501.1| Glutamate racemase [Bacillus cereus AH603]
gi|228717160|gb|EEL68836.1| Glutamate racemase [Bacillus cereus AH603]
Length = 274
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 55/259 (21%), Positives = 105/259 (40%), Gaps = 6/259 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ ++
Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWE-MTE 65
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L + VIACNTA ++ +E++ P P + A T + + I+ T
Sbjct: 66 HLLDLNIKMLVIACNTATAVVLEEMQKQLPIPVVGVIHPGSRTALKVTNTYHVGIIGTIG 125
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + S ++ + ++ VE + + + + +
Sbjct: 126 TVKSGAYEEALKSINNRVMVESLACPPFVELVE----SGNFESEMAYEVVRETLQPLKST 181
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHA 249
D ++L CTHYP++ V +++ V + + D AR +L DH
Sbjct: 182 DIDTLILGCTHYPILGPVIKKVMGDQVQLISSGDETAREVSTILYHSKMLNDGEEQSDHL 241
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 242 FLTTGKIGLFKEIASKWFG 260
>gi|222054462|ref|YP_002536824.1| glutamate racemase [Geobacter sp. FRC-32]
gi|221563751|gb|ACM19723.1| glutamate racemase [Geobacter sp. FRC-32]
Length = 283
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 57/256 (22%), Positives = 111/256 (43%), Gaps = 6/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I +FDSG+GGL VL+++ ++P+ IY+ D PYG + + + S L
Sbjct: 4 KAIGVFDSGVGGLTVLKEIMKVLPQEDTIYLGDTARVPYGTKSPETVVRYSRQITS-FLV 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ V+ACNTA + L+ F P ++AAA T+SG + ++ T T++
Sbjct: 63 SRDIKMLVVACNTASAVSLTALKKEFSIPIVGVIEPGARRAAAVTRSGKVGVIGTAGTIK 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + I + + + E I + + + + + D
Sbjct: 123 SSAYAKAIKRINPGIEVVTRACPLFVPLAE----EGWIDNEIARLTAQTYLKGLKEESVD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALFL 252
+VL CTHYP++ + ++ V +D+++ A +L + + + T +H F+
Sbjct: 179 TLVLGCTHYPILKGIIAEVMGDGVTLVDSAEETAFTVAEILGKKSLLRPTSEKGNHHFFV 238
Query: 253 SGKPDIAMRRLMQGFG 268
+ P +R + G
Sbjct: 239 TDVPAGFIRVGSRFLG 254
>gi|229013698|ref|ZP_04170827.1| Glutamate racemase [Bacillus mycoides DSM 2048]
gi|228747620|gb|EEL97494.1| Glutamate racemase [Bacillus mycoides DSM 2048]
Length = 274
Score = 256 bits (654), Expect = 3e-66, Method: Composition-based stats.
Identities = 55/259 (21%), Positives = 105/259 (40%), Gaps = 6/259 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ ++
Sbjct: 7 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWE-MTE 65
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L + VIACNTA ++ +E++ P P + A T + + I+ T
Sbjct: 66 HLLDLNIKMLVIACNTATAVVLEEMQKQLPIPVVGVIHPGSRTALKVTNTYHVGIIGTIG 125
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + S ++ + ++ VE + + + + +
Sbjct: 126 TVKSGAYEEALKSINNRVMVESLACPPFVELVE----SGNFESEMAYEVVRETLQPLKST 181
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHA 249
D ++L CTHYP++ V +++ V + + D AR +L DH
Sbjct: 182 DIDTLILGCTHYPILGPVIKKVMGDQVQLISSGDETAREVSTILYHSKMLNEGEEQSDHL 241
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 242 FLTTGKIGLFKEIASKWFG 260
>gi|317129840|ref|YP_004096122.1| glutamate racemase [Bacillus cellulosilyticus DSM 2522]
gi|315474788|gb|ADU31391.1| glutamate racemase [Bacillus cellulosilyticus DSM 2522]
Length = 279
Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 58/257 (22%), Positives = 104/257 (40%), Gaps = 6/257 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V+ ++ +P+ IY+ D PYG + ++K +
Sbjct: 1 MDRPIGVIDSGVGGLTVVSELIRQLPKEEIIYIGDTARCPYGPRPESEVRKYTWEMID-Y 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + VIACNTA ++ +E + P P A T++ + ++ T T
Sbjct: 60 LLLKDIKMLVIACNTATAVVLEEAKQQLPIPVVGVIHPGTIAALKVTKTDHVGVIGTEGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + + ++ L VE DE + ++ R
Sbjct: 120 INSGAYERELTMINHEVKVESLACPNLVPLVERGL----FSSDEASEIVKESLAPILSTR 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHAL 250
D ++L CTHYPL+ V R+++ V+ + + D AR LL + HA
Sbjct: 176 IDSLILGCTHYPLLAPVIREIAGEKVEIICSGDETAREVSALLYHQELLFKEERIPKHAF 235
Query: 251 FLSGKPDIAMRRLMQGF 267
+ +G D+ + Q
Sbjct: 236 YSTGSSDMFEQIAKQWL 252
>gi|229169224|ref|ZP_04296938.1| Glutamate racemase [Bacillus cereus AH621]
gi|228614290|gb|EEK71401.1| Glutamate racemase [Bacillus cereus AH621]
Length = 270
Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 55/259 (21%), Positives = 105/259 (40%), Gaps = 6/259 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ ++
Sbjct: 3 KLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWE-MTE 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L + VIACNTA ++ +E++ P P + A T + + I+ T
Sbjct: 62 HLLDLNIKMLVIACNTATAVVLEEMQKQLPIPVVGVIHPGSRTALKVTNTYHVGIIGTIG 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + S ++ + ++ VE + + + + +
Sbjct: 122 TVKSGAYEEALKSINNRVMVESLACPPFVELVE----SGNFESEMAYEVVRETLQPLKST 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHA 249
D ++L CTHYP++ V +++ V + + D AR +L DH
Sbjct: 178 DIDTLILGCTHYPILGPVIKKVMGDQVQLISSGDETAREVSTILYHSKMLNEGEEQSDHL 237
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 238 FLTTGKIGLFKEIASKWFG 256
>gi|148262569|ref|YP_001229275.1| glutamate racemase [Geobacter uraniireducens Rf4]
gi|146396069|gb|ABQ24702.1| glutamate racemase [Geobacter uraniireducens Rf4]
Length = 288
Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 112/256 (43%), Gaps = 6/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I IFDSG+GGL VL+++ +P+ IY+ D PYG+ + + + S L
Sbjct: 13 KAIGIFDSGVGGLTVLKEIIKTLPQEDTIYLGDTARVPYGSKSPETVTRYSRQITS-FLV 71
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ + V+ACNTA + L+ FP P ++AA+ T+SG + ++ T T++
Sbjct: 72 QRDIKMLVVACNTASAVSLAALKKEFPIPIVGVIEPGARRAASVTRSGKVGVIGTAGTIK 131
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + I + + + + E + + + + + + D
Sbjct: 132 SSAYAKAIKRINPEIEVVTRACPLFVPLAE----EGWVDNEVARLTAQAYLQGVKEEGVD 187
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALFL 252
+VL CTHYP++ + ++ V +D+++ A +L + + +H F+
Sbjct: 188 TLVLGCTHYPILKGIIAEVMGGGVTLVDSAEETAFTVAEILRGKALLRPSSEKGNHHFFV 247
Query: 253 SGKPDIAMRRLMQGFG 268
+ P +R + G
Sbjct: 248 TDVPAGFIRVGNRFLG 263
>gi|205374388|ref|ZP_03227186.1| glutamate racemase [Bacillus coahuilensis m4-4]
Length = 264
Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats.
Identities = 59/261 (22%), Positives = 104/261 (39%), Gaps = 6/261 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I I DSG+GGL V++++ +P YV D PYG ++ L ++
Sbjct: 1 MNKPIGIIDSGVGGLTVVKEVMRQLPNERIYYVGDTARCPYGPRHTDEVRTFTWEL-TNY 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L +Y + +IACNTA ++ DE++ P + A +T+SG I +L T T
Sbjct: 60 LLQYDIKMLIIACNTATAVVLDEIKHKLSIPVIGVIDPGARAAIKHTKSGRIGVLGTNVT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + + + S VE E +K ++ +
Sbjct: 120 VKSKAYDRALRTINRDVQVWSKSCPKFVPLVESGEYTGSFAEKIVKNTLQS----MKQHP 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHAL 250
D I+L CTHYPL+ + + + V + + D AR A +L + H
Sbjct: 176 LDTIILGCTHYPLLEPIIQDVMGSNVKVISSGDETAREASAILDYQELIYAGDTKPAHRF 235
Query: 251 FLSGKPDIAMRRLMQGFGLKS 271
F +G ++ ++
Sbjct: 236 FTTGSVELFKNIAESWLEFEA 256
>gi|254780905|ref|YP_003065318.1| glutamate racemase [Candidatus Liberibacter asiaticus str. psy62]
gi|254040582|gb|ACT57378.1| glutamate racemase [Candidatus Liberibacter asiaticus str. psy62]
Length = 271
Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats.
Identities = 271/271 (100%), Positives = 271/271 (100%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL
Sbjct: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS
Sbjct: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI
Sbjct: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH
Sbjct: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
QTRVFDDHALFLSGKPDIAMRRLMQGFGLKS
Sbjct: 241 QTRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
>gi|229006826|ref|ZP_04164459.1| Glutamate racemase [Bacillus mycoides Rock1-4]
gi|228754448|gb|EEM03860.1| Glutamate racemase [Bacillus mycoides Rock1-4]
Length = 265
Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats.
Identities = 54/258 (20%), Positives = 105/258 (40%), Gaps = 6/258 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L +I + DSG+GGL V +++ +P+ IY+ D PYG +++ ++
Sbjct: 2 LNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWE-MTEY 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + VIACNTA ++ +E++ P + A T + + I+ T T
Sbjct: 61 LLALDIKMLVIACNTATAVVLEEMQKQLKIPVVGVIHPGSRTALKVTNTYHVGIIGTIGT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + + S ++ + ++ VE + + + + +
Sbjct: 121 VKSGAYEDALKSINNRVMVESLACPPFVELVE----SGNFESEMAYEVVRETLQPLKNTE 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHAL 250
D ++L CTHYP++ V +++ V + + D AR +L DH
Sbjct: 177 IDTLILGCTHYPILGPVIKRVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDHLF 236
Query: 251 FLSGKPDIAMRRLMQGFG 268
+GK D+ + FG
Sbjct: 237 LTTGKIDLFKEIASKWFG 254
>gi|2462086|emb|CAA70886.1| putative glutamate racemase protein [Bacillus cereus ATCC 10987]
Length = 269
Score = 255 bits (652), Expect = 5e-66, Method: Composition-based stats.
Identities = 55/260 (21%), Positives = 104/260 (40%), Gaps = 6/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
KL +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 1 MKLNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWE-MT 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L + VIA NTA ++ +E++ P P + A T + + I+ T
Sbjct: 60 EHLLDLNIKMLVIAMNTATAVVLEEMQKQLPIPVVGVIHPGSRTALKMTNTYHVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + S ++ + ++ VE + + + + +
Sbjct: 120 GTVKSGAYEEALKSINNRVMVESLACPPFVELVE----SGNFESEMAYEVVRETLQPLKN 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDH 248
D ++L CTHYP++ V +Q+ V + + D AR +L DH
Sbjct: 176 TDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDH 235
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+GK + + FG
Sbjct: 236 LFLTTGKIGLFKEIASKWFG 255
>gi|229087049|ref|ZP_04219201.1| Glutamate racemase [Bacillus cereus Rock3-44]
gi|228696242|gb|EEL49075.1| Glutamate racemase [Bacillus cereus Rock3-44]
Length = 265
Score = 255 bits (651), Expect = 5e-66, Method: Composition-based stats.
Identities = 55/258 (21%), Positives = 104/258 (40%), Gaps = 6/258 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L +I + DSG+GGL V +++ +P+ IY+ D PYG +++ ++
Sbjct: 2 LNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWE-MTEH 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + VIACNTA ++ +E++ P P + A T + + I+ T T
Sbjct: 61 LLALDIKMLVIACNTATAVVLEEMQKQLPIPVVGVIHPGSRTALKVTNTYHVGIIGTIGT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + S ++ + ++ VE + + + +
Sbjct: 121 VKSGAYEEALKSINNRVMVESLACPPFVELVE----SGNFESAMAYEVVRETLQPLKTTE 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHAL 250
D ++L CTHYP++ V +++ V + + D AR +L DH
Sbjct: 177 IDTLILGCTHYPILGPVIKRVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDHLF 236
Query: 251 FLSGKPDIAMRRLMQGFG 268
+GK D+ + FG
Sbjct: 237 LTTGKIDLFKEIASKWFG 254
>gi|302186441|ref|ZP_07263114.1| glutamate racemase [Pseudomonas syringae pv. syringae 642]
Length = 271
Score = 255 bits (651), Expect = 6e-66, Method: Composition-based stats.
Identities = 70/251 (27%), Positives = 117/251 (46%), Gaps = 5/251 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ IFDSG+GGL VL ++R L+P +Y+AD PYG + +R + +
Sbjct: 11 DAPVGIFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTPEFIIERCLTIAGFFR 70
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA +R +P +G PA+K AA T+SG++ +L+T TL
Sbjct: 71 -EQGAKALVVACNTATAAGVSHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTL 129
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + S + L +E + +I++ ++ R
Sbjct: 130 QSARFAALLDRFASDVRVVTQPCPGLVELIET----GDLVSPQIRQLLQHYVEPLLAARC 185
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D I+L CTHYP + + R++ P V +D ++AR+ + LL R + V D +
Sbjct: 186 DTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLARSGVLASGVARDTLYWS 245
Query: 253 SGKPDIAMRRL 263
S PD + L
Sbjct: 246 SDIPDNFRKIL 256
>gi|228993222|ref|ZP_04153143.1| Glutamate racemase [Bacillus pseudomycoides DSM 12442]
gi|228999271|ref|ZP_04158851.1| Glutamate racemase [Bacillus mycoides Rock3-17]
gi|228760468|gb|EEM09434.1| Glutamate racemase [Bacillus mycoides Rock3-17]
gi|228766548|gb|EEM15190.1| Glutamate racemase [Bacillus pseudomycoides DSM 12442]
Length = 271
Score = 254 bits (650), Expect = 7e-66, Method: Composition-based stats.
Identities = 54/258 (20%), Positives = 105/258 (40%), Gaps = 6/258 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L +I + DSG+GGL V +++ +P+ IY+ D PYG +++ ++
Sbjct: 8 LNRAIGVIDSGVGGLTVAKELIRQLPKERIIYLGDTARCPYGPRSREEVRQFTWE-MTEY 66
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + VIACNTA ++ +E++ P + A T + + I+ T T
Sbjct: 67 LLALDIKMLVIACNTATAVVLEEMQKQLKIPVVGVIHPGSRTALKVTNTYHVGIIGTIGT 126
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + + S ++ + ++ VE + + + + +
Sbjct: 127 VKSGAYEDALKSINNRVMVESLACPPFVELVE----SGNFESEMAYEVVRETLQPLKNTE 182
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHAL 250
D ++L CTHYP++ V +++ V + + D AR +L DH
Sbjct: 183 IDTLILGCTHYPILGPVIKRVMGDKVQLISSGDETAREVSTILYHSKMLNEGEEQSDHLF 242
Query: 251 FLSGKPDIAMRRLMQGFG 268
+GK D+ + FG
Sbjct: 243 LTTGKIDLFKEIASKWFG 260
>gi|257866171|ref|ZP_05645824.1| glutamate racemase [Enterococcus casseliflavus EC30]
gi|257872501|ref|ZP_05652154.1| glutamate racemase [Enterococcus casseliflavus EC10]
gi|257800105|gb|EEV29157.1| glutamate racemase [Enterococcus casseliflavus EC30]
gi|257806665|gb|EEV35487.1| glutamate racemase [Enterococcus casseliflavus EC10]
Length = 274
Score = 254 bits (649), Expect = 1e-65, Method: Composition-based stats.
Identities = 53/265 (20%), Positives = 97/265 (36%), Gaps = 8/265 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I DSG+GGL V+++ +P +Y+ D PYG + + +
Sbjct: 4 MTNNRPIGFIDSGVGGLTVVKEAIKQLPNESILYLGDTARCPYGPRPAEQVIEYTWQ-MT 62
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L + + VIACNTA + +E++ +P + A +++ I ++ T
Sbjct: 63 RFLLEKNIKMLVIACNTATAVALEEIKEQLTIPVIGVILPGSRAAVKASKNQRIGVIGTN 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ +H + ++ VE + KK + +
Sbjct: 123 GTIKSDSYKRALHGKAPHASVVSLACPKFVPIVESK----QYHSSVAKKIVAETLRPLKN 178
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR---VFD 246
KR D ++L CTHYPL+ + + + +D+ LL + T
Sbjct: 179 KRLDTVILGCTHYPLLRPLIQNELGAHIQLIDSGAETVGEVSTLLDYFSIAATSQDDPHP 238
Query: 247 DHALFLSGKPDIAMRRLMQGFGLKS 271
HA F +G P + L +
Sbjct: 239 KHAFFTTGSPKMFDEIANDWLDLDT 263
>gi|89095339|ref|ZP_01168257.1| glutamate racemase [Oceanospirillum sp. MED92]
gi|89080414|gb|EAR59668.1| glutamate racemase [Oceanospirillum sp. MED92]
Length = 276
Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 58/259 (22%), Positives = 108/259 (41%), Gaps = 2/259 (0%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I +FDSG+GGL VL ++ L+P IY+ D PYG ++ + +
Sbjct: 1 MLNNLPIGVFDSGVGGLTVLNAIKDLLPNEDLIYLGDTARVPYGTKSSASVIRYA-EQAA 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L + L VIACNTA + D L+ P +A +G + P + A TQ+ I +++T
Sbjct: 60 AALICREVKLLVIACNTASAVAVDHLQKLNPEIAVVGVIEPGADASCAATQNNHIGVIAT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+ + I + + + + EE ++ E +K+ +
Sbjct: 120 EGTVNNQAYQSAILKRNPNASVVAQACSLFVALAEEGWHEGELVESIVKECLRPLLESDY 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
D +VL CTH+P++ R + V+ +D++++ A+ + L +
Sbjct: 180 QTNMDTLVLGCTHFPVLKESIRNIVGDNVELVDSAETTAKVVKHYLTEKELLNGQDDGRV 239
Query: 249 ALFLSGKPDIAMRRLMQGF 267
+ ++ P R +
Sbjct: 240 SFLVTDDPVRFSRVARNFY 258
>gi|319789116|ref|YP_004150749.1| glutamate racemase [Thermovibrio ammonificans HB-1]
gi|317113618|gb|ADU96108.1| glutamate racemase [Thermovibrio ammonificans HB-1]
Length = 262
Score = 254 bits (648), Expect = 1e-65, Method: Composition-based stats.
Identities = 65/256 (25%), Positives = 113/256 (44%), Gaps = 9/256 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL VL+ +R L+P+ + IY D PYG + K + + +L
Sbjct: 3 DRPIGVFDSGVGGLTVLKALRELLPDENLIYFGDTARVPYGTKSPKTIIKFSIQN-TKLL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ Y + V+ACNT+ + L+ FP P K+A T + + ++ T AT+
Sbjct: 62 ESYGVKMVVVACNTSSAHALEILQEEFPFPVVGVVEPGAKEAVKSTDNRRVGVIGTEATV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I S C + + + +EE + + ++ E +
Sbjct: 122 KSEAYRKAIVSLDPFCTVFQKACPLFVPLIEEGWLKDPVTLEVARR----YLGEFKEFNV 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTHYPLI V ++ P + +D+++++AR + LLP + + +
Sbjct: 178 DTLVLGCTHYPLIKEVIGEVLP-GIRLVDSAEAVAREVKRLLPYR---RKGSGGAIKVLV 233
Query: 253 SGKPDIAMRRLMQGFG 268
S K + R G
Sbjct: 234 SDKTERFERIARLIMG 249
>gi|312903654|ref|ZP_07762830.1| glutamate racemase [Enterococcus faecalis TX0635]
gi|310633007|gb|EFQ16290.1| glutamate racemase [Enterococcus faecalis TX0635]
Length = 275
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 59/264 (22%), Positives = 105/264 (39%), Gaps = 7/264 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
Q +I + DSG+GGL VL++ +P IY+ D PYG + + +
Sbjct: 3 MSNQEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVIQFTWE-MA 61
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
D L K + + VIACNTA + +E+++ P +P + A T++ I ++ T
Sbjct: 62 DFLLKKRIKMLVIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKNNKIGVIGTL 121
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ I S + ++ VE + + KK + +
Sbjct: 122 GTIKSASYEIAIKSKAPAIEVTSLACPKFVPIVE----SNQYRSSVAKKIVAETLQALQL 177
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-- 247
K D ++L CTHYPL+ V + + V +D+ LL + T
Sbjct: 178 KGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDIAHTPEAPTQP 237
Query: 248 HALFLSGKPDIAMRRLMQGFGLKS 271
H + +G + G+++
Sbjct: 238 HEFYTTGSAKMFEEIASSWLGIEN 261
>gi|39998014|ref|NP_953965.1| glutamate racemase [Geobacter sulfurreducens PCA]
gi|39984959|gb|AAR36315.1| glutamate racemase [Geobacter sulfurreducens PCA]
gi|298506955|gb|ADI85678.1| glutamate racemase [Geobacter sulfurreducens KN400]
Length = 272
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 61/256 (23%), Positives = 107/256 (41%), Gaps = 6/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I IFDSG+GGL VL+++ ++P+ IY+ D PYG + + + + S L
Sbjct: 4 KAIGIFDSGVGGLTVLKEIIKVLPQEDTIYLGDTARVPYGTKSPETVTRYSLEIAS-FLV 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
K L V+ACNTA + L P P ++A A T++G + ++ T T+R
Sbjct: 63 KRDIKLLVVACNTASAASLEALTERLPIPVVGVIEPGARRAVATTRTGKVGVIGTEGTIR 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + I + + + + E + + + D
Sbjct: 123 SSAYAKAIKRLNPEVEVITRACPLFVPLAE----EGWTDNEVARLTARTYLAGLREQGVD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALFL 252
IVL CTHYPL+ V + V +D+++ AR +L + + +H F+
Sbjct: 179 TIVLGCTHYPLLKRVIGETVGEDVRLVDSAEETARTVADILRGRDLLRPDGEQGNHHFFV 238
Query: 253 SGKPDIAMRRLMQGFG 268
+ P +R + G
Sbjct: 239 TDVPAGFIRVGNRFIG 254
>gi|289627915|ref|ZP_06460869.1| glutamate racemase [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289647290|ref|ZP_06478633.1| glutamate racemase [Pseudomonas syringae pv. aesculi str. 2250]
gi|330868901|gb|EGH03610.1| glutamate racemase [Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 271
Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats.
Identities = 68/259 (26%), Positives = 121/259 (46%), Gaps = 9/259 (3%)
Query: 9 EKKLQN----SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64
+ ++ + + IFDSG+GGL VL ++R L+P +Y+AD PYG + +R
Sbjct: 3 DMQMSHASDAPVAIFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTPEFITERC 62
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
+ + + V+ACNTA +R +P +G PA+K AA T+SG++
Sbjct: 63 LTIAGFFR-EQGAKALVVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVG 121
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+L+T TL+ + L+ + + + L +E + +I++ ++
Sbjct: 122 VLATTGTLQSARFAALLDRFANDVRVVTQPCPGLVELIET----GDLVSPQIRQLLQHYV 177
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
R D I+L CTHYP + + +++ P V +D ++AR+ + LL R + T
Sbjct: 178 EPLLAARCDTIILGCTHYPFLKPLLQEMLPESVTLIDTGAAVARQLQRLLSRSSLLATGD 237
Query: 245 FDDHALFLSGKPDIAMRRL 263
D + S PD + L
Sbjct: 238 ARDTVYWSSDIPDNFRKIL 256
>gi|84494378|ref|ZP_00993497.1| glutamate racemase [Janibacter sp. HTCC2649]
gi|84383871|gb|EAP99751.1| glutamate racemase [Janibacter sp. HTCC2649]
Length = 274
Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats.
Identities = 56/259 (21%), Positives = 100/259 (38%), Gaps = 8/259 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I IFDSG GGL V + + +P Y+ D PYG + + L
Sbjct: 3 DSPIGIFDSGYGGLTVARAVLDQLPHESVAYLGDTARTPYGPRPIAETRAFALECLDR-L 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA + + R + PA+++A T++G I ++ST T
Sbjct: 62 VNHGVKALVIACNTASAAVLHDARERYDVPVVEVIRPAVRRAVGATRTGRIGVISTLGTH 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + + VE G +E++ + +
Sbjct: 122 QSRAYLDAFAA-APHLTVTSEPCPRFVDFVESGVTGG----EELRTVAREYLAPLQEQDV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFDDHAL 250
D ++L CTHYPL+ V + V + +++ A+ +L + + +H
Sbjct: 177 DTLILGCTHYPLLAGVISYVMGPDVTLVSSAEETAKELYRVLADADLLRPDHLPAPEHGF 236
Query: 251 FLSGKPDIAMRRLMQGFGL 269
+G P+ R ++ GL
Sbjct: 237 TTTGDPEEFRRLALRFLGL 255
>gi|163791540|ref|ZP_02185944.1| glutamate racemase [Carnobacterium sp. AT7]
gi|159873176|gb|EDP67276.1| glutamate racemase [Carnobacterium sp. AT7]
Length = 272
Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats.
Identities = 54/259 (20%), Positives = 99/259 (38%), Gaps = 8/259 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +I DSG+GGL V+++ +P YV D PYG + +++ + L
Sbjct: 3 KQAIGFIDSGVGGLTVVKEAMRQLPNESIYYVGDTARCPYGPRPEEQVRQFTWE-MTHFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA + ++L+ +P + A T++ I ++ T T+
Sbjct: 62 LNKDIKMLVIACNTATAVALEDLKKKLAIPIIGVILPGSRAAIKATKNNHIGVIGTEGTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ +I S + + ++ VE G KK + + K
Sbjct: 122 KSEKYKKMIQSKDTLASVSSLACPKFVPIVESNEYG----SAIAKKIVAETLKPFKNKNI 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH---A 249
D ++L CTHYPL+ + + + V +D+ +L N + +
Sbjct: 178 DTLILGCTHYPLLRPIIQNVMGDSVTLIDSGAETISEVSTILDYFNLAELSKNKEVSERK 237
Query: 250 LFLSGKPDIAMRRLMQGFG 268
F +G + Q G
Sbjct: 238 FFTTGSTHMFNDIASQWLG 256
>gi|257875806|ref|ZP_05655459.1| glutamate racemase [Enterococcus casseliflavus EC20]
gi|257809972|gb|EEV38792.1| glutamate racemase [Enterococcus casseliflavus EC20]
Length = 274
Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats.
Identities = 53/265 (20%), Positives = 97/265 (36%), Gaps = 8/265 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I DSG+GGL V+++ +P +Y+ D PYG + + +
Sbjct: 4 MTNNRPIGFIDSGVGGLTVVKEAIKQLPNESILYLGDTARCPYGPRPAEQVIEYTWQ-MT 62
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L + + VIACNTA + +E++ +P + A +++ I ++ T
Sbjct: 63 RFLLEKNIKMLVIACNTATAVALEEIKEQLAIPVIGVILPGSRAAVKASKNQRIGVIGTN 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ +H + ++ VE + KK + +
Sbjct: 123 GTIKSDSYKRALHGKAPHASVVSLACPKFVPIVESK----QYHSSVAKKIVAETLRPLKN 178
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR---VFD 246
KR D ++L CTHYPL+ + + + +D+ LL + T
Sbjct: 179 KRLDTVILGCTHYPLLRPLIQNELGAHIQLIDSGAETVGEVSTLLDYFSIAATSQDDPHP 238
Query: 247 DHALFLSGKPDIAMRRLMQGFGLKS 271
HA F +G P + L +
Sbjct: 239 QHAFFTTGSPKMFDEIANDWLDLDT 263
>gi|146306097|ref|YP_001186562.1| glutamate racemase [Pseudomonas mendocina ymp]
gi|167017319|sp|A4XR64|MURI_PSEMY RecName: Full=Glutamate racemase
gi|145574298|gb|ABP83830.1| glutamate racemase [Pseudomonas mendocina ymp]
Length = 263
Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats.
Identities = 72/259 (27%), Positives = 123/259 (47%), Gaps = 5/259 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q + +FDSG+GGL VL+++R L+P +YVAD PYG +++R + L ++ L
Sbjct: 5 QAPVGVFDSGVGGLSVLREIRQLLPNESLLYVADSGHVPYGEKSAEYIRERCV-LITEHL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
V+ACNTA ELR +P + +G PA+K AAA T+SG++ +L+T TL
Sbjct: 64 LAQGAKALVLACNTATAAAAAELRERYPQLPIVGMEPAVKPAAAATRSGVVGVLATTGTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + S + L +E ++ ++ ++G +
Sbjct: 124 KSAKFAALLDRFASDVRVITQPCPGLVECIE----AGALQAPATRELLQGYVEPLLAEGC 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP + + L P V +D ++AR+ + LL + T+ +
Sbjct: 180 DTLILGCTHYPFLKPLLHSLVPDSVSLIDTGAAVARQLQRLLGQHELLATQPAQATRYWS 239
Query: 253 SGKPDIAMRRLMQGFGLKS 271
SG L G ++
Sbjct: 240 SGDIQRMQAVLPLLLGEQA 258
>gi|186682253|ref|YP_001865449.1| glutamate racemase [Nostoc punctiforme PCC 73102]
gi|186464705|gb|ACC80506.1| glutamate racemase [Nostoc punctiforme PCC 73102]
Length = 288
Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats.
Identities = 58/267 (21%), Positives = 102/267 (38%), Gaps = 7/267 (2%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+D++ + + I IFDSG+GGL VL+++ +P +Y D PYG + +
Sbjct: 11 LDDFSALEPQRAPIGIFDSGVGGLTVLRQIYRQLPNESIVYFGDTARLPYGIRSQAEILQ 70
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+ + L + Q + ++ACNT+ L + +R F +P K A +
Sbjct: 71 FTREILT-WLQQQQVKMVIMACNTSSALALETVRQEFNIPILGVILPGAKAAVQEGK--R 127
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I +++TPAT + + I + V +E+ + +
Sbjct: 128 IGVIATPATAKSNAYKHAILEIAPDVQVWQVGCPEFVPLIEQNRIHDPYTAEVAR----A 183
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ D +V CTHYP + V R L P V +D + + L + T
Sbjct: 184 YLEPLLEQEIDTLVHGCTHYPHLTPVLRSLLPSQVKLVDPAVHVVAACAQELDLLGLKNT 243
Query: 243 RVFDDHALFLSGKPDIAMRRLMQGFGL 269
+SG P + +Q G
Sbjct: 244 HPPLPTRFAVSGCPQQFSQSGVQWLGY 270
>gi|295112705|emb|CBL31342.1| glutamate racemase [Enterococcus sp. 7L76]
Length = 273
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 59/264 (22%), Positives = 105/264 (39%), Gaps = 7/264 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
Q +I + DSG+GGL VL++ +P IY+ D PYG + + +
Sbjct: 1 MSNQEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWE-MA 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
D L K + + VIACNTA + +E+++ P +P + A T++ I ++ T
Sbjct: 60 DFLLKKRIKMLVIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKNNKIGVIGTL 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ I S + ++ VE + + KK + +
Sbjct: 120 GTIKSASYEIAIKSKAPAIEVTSLACPKFVPIVE----SNQYRSSVAKKIVAETLQALQL 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-- 247
K D ++L CTHYPL+ V + + V +D+ LL + T
Sbjct: 176 KGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDIAHTPEAPKQT 235
Query: 248 HALFLSGKPDIAMRRLMQGFGLKS 271
H + +G + G+++
Sbjct: 236 HEFYTTGSAKMFEEIASSWLGIEN 259
>gi|52081340|ref|YP_080131.1| glutamate racemase [Bacillus licheniformis ATCC 14580]
gi|52004551|gb|AAU24493.1| glutamate racemase [Bacillus licheniformis ATCC 14580]
Length = 271
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 51/260 (19%), Positives = 103/260 (39%), Gaps = 5/260 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P+ IY+ D PYG + + + + +
Sbjct: 1 MDQPIGVIDSGVGGLTVAKEIMRQLPKEKIIYLGDTKRCPYGPRDRKEVLSYTWEMTNYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L ++ + VIACNTA + +E+ P + A T++ I ++ T T
Sbjct: 61 LSRHHIKMLVIACNTATAIALEEISREVAIPVIGVVQPGARTAIKVTENQRIGVIGTENT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + S + ++ + VE K ++ + +
Sbjct: 121 IKSGAYEEALLSLNGDLTVENLACPMFVPFVE----SGKFLDETADEIVRTSLHPLRDSS 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHAL 250
D ++L CTHYP++ ++ V+ + + D AR +L +T +H
Sbjct: 177 IDTLILGCTHYPILKEPIQRYMGERVNIISSGDETAREVSTILSYNGLLSKTAEPPEHLF 236
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
+G+ + FG +
Sbjct: 237 LTTGERARFTKIANDWFGYE 256
>gi|315144634|gb|EFT88650.1| glutamate racemase [Enterococcus faecalis TX2141]
gi|315160935|gb|EFU04952.1| glutamate racemase [Enterococcus faecalis TX0645]
Length = 275
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 59/264 (22%), Positives = 105/264 (39%), Gaps = 7/264 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
Q +I + DSG+GGL VL++ +P IY+ D PYG + + +
Sbjct: 3 MSNQEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWE-MA 61
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
D L K + + VIACNTA + +E+++ P +P + A T++ I ++ T
Sbjct: 62 DFLLKKRIKMLVIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKNNKIGVIGTL 121
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ I S + ++ VE + + KK + +
Sbjct: 122 GTIKSASYEIAIKSKAPAIEVTSLACPKFVPIVE----SNQYRSSVAKKIVAETLQALQL 177
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-- 247
K D ++L CTHYPL+ V + + V +D+ LL + T
Sbjct: 178 KGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDIAHTPEAPKQT 237
Query: 248 HALFLSGKPDIAMRRLMQGFGLKS 271
H + +G + G+++
Sbjct: 238 HEFYTTGSAKMFEEIASSWLGIEN 261
>gi|151567719|pdb|2JFO|A Chain A, Crystal Structure Of Enterococcus Faecalis Glutamate
Racemase In Complex With D- And L-Glutamate
gi|151567720|pdb|2JFO|B Chain B, Crystal Structure Of Enterococcus Faecalis Glutamate
Racemase In Complex With D- And L-Glutamate
gi|151567721|pdb|2JFP|A Chain A, Crystal Structure Of Enterococcus Faecalis Glutamate
Racemase In Complex With D-Glutamate
gi|151567722|pdb|2JFP|B Chain B, Crystal Structure Of Enterococcus Faecalis Glutamate
Racemase In Complex With D-Glutamate
Length = 293
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 59/264 (22%), Positives = 105/264 (39%), Gaps = 7/264 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
Q +I + DSG+GGL VL++ +P IY+ D PYG + + +
Sbjct: 21 MSNQEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWE-MA 79
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
D L K + + VIACNTA + +E+++ P +P + A T++ I ++ T
Sbjct: 80 DFLLKKRIKMLVIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKNNKIGVIGTL 139
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ I S + ++ VE + + KK + +
Sbjct: 140 GTIKSASYEIAIKSKAPAIEVTSLACPKFVPIVE----SNQYRSSVAKKIVAETLQALQL 195
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-- 247
K D ++L CTHYPL+ V + + V +D+ LL + T
Sbjct: 196 KGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDIAHTPEAPTQP 255
Query: 248 HALFLSGKPDIAMRRLMQGFGLKS 271
H + +G + G+++
Sbjct: 256 HEFYTTGSAKMFEEIASSWLGIEN 279
>gi|256962283|ref|ZP_05566454.1| glutamate racemase [Enterococcus faecalis Merz96]
gi|257086476|ref|ZP_05580837.1| glutamate racemase [Enterococcus faecalis D6]
gi|257418950|ref|ZP_05595944.1| glutamate racemase [Enterococcus faecalis T11]
gi|293383312|ref|ZP_06629227.1| glutamate racemase [Enterococcus faecalis R712]
gi|293387531|ref|ZP_06632080.1| glutamate racemase [Enterococcus faecalis S613]
gi|312905819|ref|ZP_07764839.1| glutamate racemase [Enterococcus faecalis DAPTO 512]
gi|312909126|ref|ZP_07767985.1| glutamate racemase [Enterococcus faecalis DAPTO 516]
gi|256952779|gb|EEU69411.1| glutamate racemase [Enterococcus faecalis Merz96]
gi|256994506|gb|EEU81808.1| glutamate racemase [Enterococcus faecalis D6]
gi|257160778|gb|EEU90738.1| glutamate racemase [Enterococcus faecalis T11]
gi|291079335|gb|EFE16699.1| glutamate racemase [Enterococcus faecalis R712]
gi|291083041|gb|EFE20004.1| glutamate racemase [Enterococcus faecalis S613]
gi|310628158|gb|EFQ11441.1| glutamate racemase [Enterococcus faecalis DAPTO 512]
gi|311290550|gb|EFQ69106.1| glutamate racemase [Enterococcus faecalis DAPTO 516]
gi|315028078|gb|EFT40010.1| glutamate racemase [Enterococcus faecalis TX2137]
gi|315150399|gb|EFT94415.1| glutamate racemase [Enterococcus faecalis TX0012]
gi|327534752|gb|AEA93586.1| glutamate racemase [Enterococcus faecalis OG1RF]
Length = 275
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 59/264 (22%), Positives = 105/264 (39%), Gaps = 7/264 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
Q +I + DSG+GGL VL++ +P IY+ D PYG + + +
Sbjct: 3 MSNQEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWE-MA 61
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
D L K + + VIACNTA + +E+++ P +P + A T++ I ++ T
Sbjct: 62 DFLLKKRIKMLVIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKNNKIGVIGTL 121
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ I S + ++ VE + + KK + +
Sbjct: 122 GTIKSASYEIAIKSKAPTIEVTSLACPKFVPIVE----SNQYRSSVAKKIVAETLQALQL 177
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-- 247
K D ++L CTHYPL+ V + + V +D+ LL + T
Sbjct: 178 KGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDIAHTPEAPTQP 237
Query: 248 HALFLSGKPDIAMRRLMQGFGLKS 271
H + +G + G+++
Sbjct: 238 HEFYTTGSAKMFEEIASSWLGIEN 261
>gi|77460966|ref|YP_350473.1| glutamate racemase [Pseudomonas fluorescens Pf0-1]
gi|77384969|gb|ABA76482.1| putative glutamate racemase [Pseudomonas fluorescens Pf0-1]
Length = 263
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 64/256 (25%), Positives = 116/256 (45%), Gaps = 6/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL VL +++ L+P +Y+ D PYG +++R + +
Sbjct: 3 EAPIAVFDSGVGGLSVLAEIQQLLPNESLLYLGDCGHIPYGEKTPEFIRQRCS-VMAGFF 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA +LR FP +G PA+K AAA T+SG++ +L+T TL
Sbjct: 62 REQGAKALVIACNTATVAGVADLRRDFPEWPIVGMEPAVKPAAAATRSGVVGVLATTGTL 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + + + L +E + +++ ++
Sbjct: 122 QSAKFAALLDRFATDVRVITQPCPGLVELIE----SGDLHSPQLRALLKHYVDPLLANGC 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D I+L CTHYP + + + + P + +D ++AR+ + LL + +
Sbjct: 178 DTIILGCTHYPFLKPMLKSMIPESISLIDTGAAVARQLQRLLAERDLLAEGPNRPVRFWT 237
Query: 253 SGKPDIAMRRLMQGFG 268
S P+ +R + G
Sbjct: 238 SADPES-LRSTLVLLG 252
>gi|192988279|pdb|2VVT|A Chain A, Glutamate Racemase (Muri) From E. Faecalis In Complex With
A 9-Benzyl Purine Inhibitor
gi|192988280|pdb|2VVT|B Chain B, Glutamate Racemase (Muri) From E. Faecalis In Complex With
A 9-Benzyl Purine Inhibitor
Length = 290
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 59/264 (22%), Positives = 105/264 (39%), Gaps = 7/264 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
Q +I + DSG+GGL VL++ +P IY+ D PYG + + +
Sbjct: 21 MSNQEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWE-MA 79
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
D L K + + VIACNTA + +E+++ P +P + A T++ I ++ T
Sbjct: 80 DFLLKKRIKMLVIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKNNKIGVIGTL 139
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ I S + ++ VE + + KK + +
Sbjct: 140 GTIKSASYEIAIKSKAPAIEVTSLACPKFVPIVE----SNQYRSSVAKKIVAETLQALQL 195
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-- 247
K D ++L CTHYPL+ V + + V +D+ LL + T
Sbjct: 196 KGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDIAHTPEAPTQP 255
Query: 248 HALFLSGKPDIAMRRLMQGFGLKS 271
H + +G + G+++
Sbjct: 256 HEFYTTGSAKMFEEIASSWLGIEN 279
>gi|166368300|ref|YP_001660573.1| glutamate racemase [Microcystis aeruginosa NIES-843]
gi|226722987|sp|B0JGW5|MURI_MICAN RecName: Full=Glutamate racemase
gi|166090673|dbj|BAG05381.1| glutamate racemase [Microcystis aeruginosa NIES-843]
Length = 283
Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 107/258 (41%), Gaps = 8/258 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I +FDSG+GGL VL+++ +P+ +Y AD PYG + + ++ + + + +
Sbjct: 7 SPIGVFDSGVGGLTVLRELYRQLPQESILYFADTARLPYGTRSKGEIIEFVLEILTWMSE 66
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
+ + + ++ACNT+ L +E+++ F + LG + P K A + I ++STPAT
Sbjct: 67 R-RVKMVIMACNTSSALALEEVQAEFKDLPILGVILPGAKTAVQ--KGKRIGVISTPATA 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I + + +E ++ +
Sbjct: 124 KSNAYKQAIQEIDPTAQVWQIPCPEFVPLIEANRIFDPYTTQVARE----YLQPLLAENI 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +V CTHY + V R+L P V +D + S+ R A L + +
Sbjct: 180 DTLVYGCTHYRHLSPVLRRLLPSSVRLVDPAASVVRAAEKELELLGLKNPETPLPTNFAV 239
Query: 253 SGKPDIAMRRLMQGFGLK 270
SG PD R Q G
Sbjct: 240 SGDPDTFARLSRQWLGFS 257
>gi|294780992|ref|ZP_06746344.1| glutamate racemase [Enterococcus faecalis PC1.1]
gi|300859676|ref|ZP_07105764.1| glutamate racemase [Enterococcus faecalis TUSoD Ef11]
gi|294451938|gb|EFG20388.1| glutamate racemase [Enterococcus faecalis PC1.1]
gi|300850494|gb|EFK78243.1| glutamate racemase [Enterococcus faecalis TUSoD Ef11]
gi|323480360|gb|ADX79799.1| glutamate racemase [Enterococcus faecalis 62]
Length = 273
Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats.
Identities = 59/264 (22%), Positives = 105/264 (39%), Gaps = 7/264 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
Q +I + DSG+GGL VL++ +P IY+ D PYG + + +
Sbjct: 1 MSNQEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWE-MA 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
D L K + + VIACNTA + +E+++ P +P + A T++ I ++ T
Sbjct: 60 DFLLKKRIKMLVIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKNNKIGVIGTL 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ I S + ++ VE + + KK + +
Sbjct: 120 GTIKSASYEIAIKSKAPAIEVTSLACPKFVPIVE----SNQYRSSVAKKIVAETLQALQL 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-- 247
K D ++L CTHYPL+ V + + V +D+ LL + T
Sbjct: 176 KGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDIAHTPEAPTQP 235
Query: 248 HALFLSGKPDIAMRRLMQGFGLKS 271
H + +G + G+++
Sbjct: 236 HEFYTTGSAKMFEEIASSWLGIEN 259
>gi|313497102|gb|ADR58468.1| Glutamate racemase [Pseudomonas putida BIRD-1]
Length = 265
Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats.
Identities = 63/251 (25%), Positives = 112/251 (44%), Gaps = 5/251 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I + DSG+GGL VL +++ L+P +YV D PYG +++R +
Sbjct: 5 SAPIGVMDSGVGGLSVLAEIQRLLPNETLLYVGDCGHIPYGEKSPDYIRERCRHIAGFF- 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA +LR +P+ +G PA+K AAA T+SG++ +L+T TL
Sbjct: 64 HEQGAKAMVLACNTATVAAVADLRELYPTWPLVGMEPAVKPAAAATRSGVVGVLATTGTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + + + L +E + +++ ++G
Sbjct: 124 QSAKFAALLDRFANDVQVITQPCPGLVELIET----GDLASPALRQMLQGYVQPLLAAGC 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP + + + P V +D ++AR+ R LL + +
Sbjct: 180 DTLILGCTHYPFLRPLLAGMVPDDVAIIDTGAAVARQLRRLLGANDLLAEGPAGAARFWT 239
Query: 253 SGKPDIAMRRL 263
S P+ + L
Sbjct: 240 SADPEALRKIL 250
>gi|257415735|ref|ZP_05592729.1| glutamate racemase [Enterococcus faecalis AR01/DG]
gi|257157563|gb|EEU87523.1| glutamate racemase [Enterococcus faecalis ARO1/DG]
Length = 275
Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats.
Identities = 59/264 (22%), Positives = 105/264 (39%), Gaps = 7/264 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
Q +I + DSG+GGL VL++ +P IY+ D PYG + + +
Sbjct: 3 MSNQEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWE-MA 61
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
D L K + + VIACNTA + +E+++ P +P + A T++ I ++ T
Sbjct: 62 DFLLKKRIKMLVIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKNNKIGVIGTL 121
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ I S + ++ VE + + KK + +
Sbjct: 122 GTIKSASYEIAIKSKAPAIEVTSLACPKFVPIVE----SNQYRSSVAKKIVAETLQALQL 177
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-- 247
K D ++L CTHYPL+ V + + V +D+ LL + T
Sbjct: 178 KGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDIAHTPEVPKQT 237
Query: 248 HALFLSGKPDIAMRRLMQGFGLKS 271
H + +G + G+++
Sbjct: 238 HEFYTTGSAKMFEEIASSWLGIEN 261
>gi|229543635|ref|ZP_04432695.1| glutamate racemase [Bacillus coagulans 36D1]
gi|229328055|gb|EEN93730.1| glutamate racemase [Bacillus coagulans 36D1]
Length = 269
Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats.
Identities = 60/257 (23%), Positives = 96/257 (37%), Gaps = 6/257 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V ++M +P YV D PYG +KK +
Sbjct: 1 MNAPIGVIDSGVGGLTVAKEMMRQLPNETIYYVGDTARCPYGPRPVEEVKKFTWQMI-RF 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L Q + VIACNTA +I DE+R P + A +T++ I +L T T
Sbjct: 60 LMDKQIKMLVIACNTATAVILDEVREELKIPVLGVIYPGARAALKHTKNFRIGVLGTIGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + S + I ++ VE KK + +
Sbjct: 120 IKSQAYERALKSINKKVKITALACPKFVPLVESGQYN----SPIAKKIVAETLYPIQNCG 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHAL 250
D ++L CTHYPL+ + + + V + + + AR LL + H
Sbjct: 176 IDTVILGCTHYPLLGPIIKNVMGAGVSVISSGEETAREVSTLLYFHDLFNMEDTRQKHRF 235
Query: 251 FLSGKPDIAMRRLMQGF 267
+ +G I
Sbjct: 236 YTTGSSKIFAALASDWL 252
>gi|229546200|ref|ZP_04434925.1| glutamate racemase [Enterococcus faecalis TX1322]
gi|229550385|ref|ZP_04439110.1| glutamate racemase [Enterococcus faecalis ATCC 29200]
gi|255973156|ref|ZP_05423742.1| glutamate racemase [Enterococcus faecalis T1]
gi|255976199|ref|ZP_05426785.1| glutamate racemase [Enterococcus faecalis T2]
gi|256618705|ref|ZP_05475551.1| glutamate racemase [Enterococcus faecalis ATCC 4200]
gi|256762129|ref|ZP_05502709.1| glutamate racemase [Enterococcus faecalis T3]
gi|256852771|ref|ZP_05558141.1| glutamate racemase [Enterococcus faecalis T8]
gi|256958618|ref|ZP_05562789.1| glutamate racemase [Enterococcus faecalis DS5]
gi|256965478|ref|ZP_05569649.1| glutamate racemase [Enterococcus faecalis HIP11704]
gi|257078028|ref|ZP_05572389.1| glutamate racemase [Enterococcus faecalis JH1]
gi|257082916|ref|ZP_05577277.1| glutamate racemase [Enterococcus faecalis E1Sol]
gi|257085618|ref|ZP_05579979.1| glutamate racemase [Enterococcus faecalis Fly1]
gi|257089533|ref|ZP_05583894.1| glutamate racemase [Enterococcus faecalis CH188]
gi|257422962|ref|ZP_05599952.1| glutamate racemase [Enterococcus faecalis X98]
gi|307268765|ref|ZP_07550133.1| glutamate racemase [Enterococcus faecalis TX4248]
gi|307273812|ref|ZP_07555034.1| glutamate racemase [Enterococcus faecalis TX0855]
gi|307274577|ref|ZP_07555757.1| glutamate racemase [Enterococcus faecalis TX2134]
gi|307278843|ref|ZP_07559906.1| glutamate racemase [Enterococcus faecalis TX0860]
gi|307288574|ref|ZP_07568558.1| glutamate racemase [Enterococcus faecalis TX0109]
gi|307291104|ref|ZP_07570989.1| glutamate racemase [Enterococcus faecalis TX0411]
gi|312899596|ref|ZP_07758922.1| glutamate racemase [Enterococcus faecalis TX0470]
gi|312951373|ref|ZP_07770271.1| glutamate racemase [Enterococcus faecalis TX0102]
gi|229304507|gb|EEN70503.1| glutamate racemase [Enterococcus faecalis ATCC 29200]
gi|229308724|gb|EEN74711.1| glutamate racemase [Enterococcus faecalis TX1322]
gi|255964174|gb|EET96650.1| glutamate racemase [Enterococcus faecalis T1]
gi|255969071|gb|EET99693.1| glutamate racemase [Enterococcus faecalis T2]
gi|256598232|gb|EEU17408.1| glutamate racemase [Enterococcus faecalis ATCC 4200]
gi|256683380|gb|EEU23075.1| glutamate racemase [Enterococcus faecalis T3]
gi|256711230|gb|EEU26268.1| glutamate racemase [Enterococcus faecalis T8]
gi|256949114|gb|EEU65746.1| glutamate racemase [Enterococcus faecalis DS5]
gi|256955974|gb|EEU72606.1| glutamate racemase [Enterococcus faecalis HIP11704]
gi|256986058|gb|EEU73360.1| glutamate racemase [Enterococcus faecalis JH1]
gi|256990946|gb|EEU78248.1| glutamate racemase [Enterococcus faecalis E1Sol]
gi|256993648|gb|EEU80950.1| glutamate racemase [Enterococcus faecalis Fly1]
gi|256998345|gb|EEU84865.1| glutamate racemase [Enterococcus faecalis CH188]
gi|257164786|gb|EEU94746.1| glutamate racemase [Enterococcus faecalis X98]
gi|306497758|gb|EFM67290.1| glutamate racemase [Enterococcus faecalis TX0411]
gi|306500481|gb|EFM69814.1| glutamate racemase [Enterococcus faecalis TX0109]
gi|306504514|gb|EFM73721.1| glutamate racemase [Enterococcus faecalis TX0860]
gi|306508729|gb|EFM77819.1| glutamate racemase [Enterococcus faecalis TX2134]
gi|306509497|gb|EFM78545.1| glutamate racemase [Enterococcus faecalis TX0855]
gi|306514893|gb|EFM83440.1| glutamate racemase [Enterococcus faecalis TX4248]
gi|310630633|gb|EFQ13916.1| glutamate racemase [Enterococcus faecalis TX0102]
gi|311293275|gb|EFQ71831.1| glutamate racemase [Enterococcus faecalis TX0470]
gi|315030713|gb|EFT42645.1| glutamate racemase [Enterococcus faecalis TX4000]
gi|315031599|gb|EFT43531.1| glutamate racemase [Enterococcus faecalis TX0017]
gi|315034959|gb|EFT46891.1| glutamate racemase [Enterococcus faecalis TX0027]
gi|315148458|gb|EFT92474.1| glutamate racemase [Enterococcus faecalis TX4244]
gi|315153644|gb|EFT97660.1| glutamate racemase [Enterococcus faecalis TX0031]
gi|315156538|gb|EFU00555.1| glutamate racemase [Enterococcus faecalis TX0043]
gi|315158364|gb|EFU02381.1| glutamate racemase [Enterococcus faecalis TX0312]
gi|315165532|gb|EFU09549.1| glutamate racemase [Enterococcus faecalis TX1302]
gi|315168389|gb|EFU12406.1| glutamate racemase [Enterococcus faecalis TX1341]
gi|315170972|gb|EFU14989.1| glutamate racemase [Enterococcus faecalis TX1342]
gi|315174640|gb|EFU18657.1| glutamate racemase [Enterococcus faecalis TX1346]
gi|315577482|gb|EFU89673.1| glutamate racemase [Enterococcus faecalis TX0630]
gi|329576388|gb|EGG57901.1| glutamate racemase [Enterococcus faecalis TX1467]
Length = 275
Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats.
Identities = 59/264 (22%), Positives = 105/264 (39%), Gaps = 7/264 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
Q +I + DSG+GGL VL++ +P IY+ D PYG + + +
Sbjct: 3 MSNQEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWE-MA 61
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
D L K + + VIACNTA + +E+++ P +P + A T++ I ++ T
Sbjct: 62 DFLLKKRIKMLVIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKNNKIGVIGTL 121
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ I S + ++ VE + + KK + +
Sbjct: 122 GTIKSASYEIAIKSKAPAIEVTSLACPKFVPIVE----SNQYRSSVAKKIVAETLQALQL 177
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-- 247
K D ++L CTHYPL+ V + + V +D+ LL + T
Sbjct: 178 KGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDIAHTPEAPTQP 237
Query: 248 HALFLSGKPDIAMRRLMQGFGLKS 271
H + +G + G+++
Sbjct: 238 HEFYTTGSAKMFEEIASSWLGIEN 261
>gi|26987472|ref|NP_742897.1| glutamate racemase [Pseudomonas putida KT2440]
gi|38258012|sp|Q88PW2|MURI_PSEPK RecName: Full=Glutamate racemase
gi|24982136|gb|AAN66361.1|AE016264_5 glutamate racemase [Pseudomonas putida KT2440]
Length = 265
Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats.
Identities = 62/251 (24%), Positives = 112/251 (44%), Gaps = 5/251 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I + DSG+GGL VL +++ L+P +YV D PYG +++R +
Sbjct: 5 SAPIGVMDSGVGGLSVLAEIQRLLPNETLLYVGDCGHIPYGEKSPDYIRERCRRIAGFF- 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA +LR +P+ +G PA+K AAA T+SG++ +L+T TL
Sbjct: 64 HEQGAKAMVLACNTATVAAVADLRELYPTWPLVGMEPAVKPAAAATRSGVVGVLATTGTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + + + L +E + +++ ++G
Sbjct: 124 QSAKFAALLDRFANDVQVITQPCPGLVELIE----AGDLVSPAVRQLLQGYVQPLLAAGC 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP + + + P V +D ++AR+ + LL + +
Sbjct: 180 DTLILGCTHYPFLRPLLAGMVPDDVAIIDTGAAVARQLQRLLGANDLLAEGPAGAARFWT 239
Query: 253 SGKPDIAMRRL 263
S P+ + L
Sbjct: 240 SADPEALRKIL 250
>gi|56421203|ref|YP_148521.1| glutamate racemase [Geobacillus kaustophilus HTA426]
gi|261418316|ref|YP_003251998.1| glutamate racemase [Geobacillus sp. Y412MC61]
gi|297529170|ref|YP_003670445.1| glutamate racemase [Geobacillus sp. C56-T3]
gi|319767724|ref|YP_004133225.1| glutamate racemase [Geobacillus sp. Y412MC52]
gi|81557797|sp|Q5KWI3|MURI_GEOKA RecName: Full=Glutamate racemase
gi|56381045|dbj|BAD76953.1| glutamate racemase [Geobacillus kaustophilus HTA426]
gi|261374773|gb|ACX77516.1| glutamate racemase [Geobacillus sp. Y412MC61]
gi|297252422|gb|ADI25868.1| glutamate racemase [Geobacillus sp. C56-T3]
gi|317112590|gb|ADU95082.1| glutamate racemase [Geobacillus sp. Y412MC52]
Length = 264
Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats.
Identities = 58/258 (22%), Positives = 103/258 (39%), Gaps = 6/258 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I + DSG+GGL V +++ +P+ IY+ D PYG +++ +
Sbjct: 1 MERAIGVIDSGVGGLTVAKEIMRQLPKEQIIYLGDTARCPYGPRPVEEVRRFTWQMID-Y 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L +Y + VIACNTA + D++R+ P + A T+ G I ++ T T
Sbjct: 60 LRQYPLKMLVIACNTATAVALDDVRAKLDIPVLGVIHPGARAALKATRRGHIGVIGTIGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R + S + + ++ VE E +
Sbjct: 120 IRSRAYEKALQSINPRVQVESLACPKFVPLVESGDFEG----QEAMAIVAESLAPLRPLP 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHAL 250
DV++L CTHYPL+ + R V + + AR +L T +H
Sbjct: 176 IDVLILGCTHYPLLAPLIRTYMGKRVKLICSGGETAREVSAILHHSQLLYTGEREPEHLF 235
Query: 251 FLSGKPDIAMRRLMQGFG 268
F +G ++ + + FG
Sbjct: 236 FTTGPKELFEKISGKWFG 253
>gi|298485684|ref|ZP_07003763.1| Glutamate racemase [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|298159710|gb|EFI00752.1| Glutamate racemase [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|330988602|gb|EGH86705.1| glutamate racemase [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 271
Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats.
Identities = 69/259 (26%), Positives = 120/259 (46%), Gaps = 9/259 (3%)
Query: 9 EKKLQN----SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64
+ ++ + + IFDSG+GGL VL ++R L+P +Y+AD PYG + +R
Sbjct: 3 DMQMSHASDAPVAIFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTPEFITERC 62
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
+ + + V+ACNTA +R +P +G PA+K AA T+SG++
Sbjct: 63 LTIAGFFR-EQGAKALVVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVG 121
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+L+T TL+ + L+ + + + L +E + +I++ +
Sbjct: 122 VLATTGTLQSARFAALLDRFANDVRVVTQPCPGLVELIET----GDLLSPQIRQLLLHYV 177
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
R D I+L CTHYP + + R++ P V +D ++AR+ + LL R + T
Sbjct: 178 EPLLAARCDTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSSLLATGD 237
Query: 245 FDDHALFLSGKPDIAMRRL 263
D + S PD + L
Sbjct: 238 ARDTVYWSSDIPDNFRKIL 256
>gi|227518376|ref|ZP_03948425.1| glutamate racemase [Enterococcus faecalis TX0104]
gi|227074054|gb|EEI12017.1| glutamate racemase [Enterococcus faecalis TX0104]
Length = 275
Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats.
Identities = 59/264 (22%), Positives = 104/264 (39%), Gaps = 7/264 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
Q +I + DSG+GGL VL++ +P IY+ D PYG + + +
Sbjct: 3 MSNQEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWE-MA 61
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
D L K + + VIACNTA + +E+++ P +P + A T++ I ++ T
Sbjct: 62 DFLLKKRIKMLVIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKNNKIGVIGTL 121
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ I S + + VE + + KK + +
Sbjct: 122 GTIKSASYEIAIKSKAPTIEVTSLDCPKFVPIVE----SNQYRSSVAKKIVAETLQALQL 177
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-- 247
K D ++L CTHYPL+ V + + V +D+ LL + T
Sbjct: 178 KGLDTLILGCTHYPLLRPVIQNVMGNHVTLIDSGAETVGEVSMLLDYFDIAHTPEAPTQP 237
Query: 248 HALFLSGKPDIAMRRLMQGFGLKS 271
H + +G + G+++
Sbjct: 238 HEFYTTGSAKMFEEIASSWLGIEN 261
>gi|257482010|ref|ZP_05636051.1| glutamate racemase [Pseudomonas syringae pv. tabaci ATCC 11528]
gi|331008869|gb|EGH88925.1| glutamate racemase [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 271
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 69/259 (26%), Positives = 120/259 (46%), Gaps = 9/259 (3%)
Query: 9 EKKLQN----SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64
+ ++ + + IFDSG+GGL VL ++R L+P +Y+AD PYG + +R
Sbjct: 3 DMQMSHASDAPVAIFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTPEFITERC 62
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
+ + + V+ACNTA +R +P +G PA+K AA T+SG++
Sbjct: 63 LTIAGFFR-EQGAKALVVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVG 121
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+L+T TL+ + L+ + + + L +E + +I++ +
Sbjct: 122 VLATTGTLQSARFAALLDRFANDVRVVTQPCPGLVELIET----GDLLSPKIRQLLLHYV 177
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
R D I+L CTHYP + + R++ P V +D ++AR+ + LL R + T
Sbjct: 178 EPLLAARCDTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSSLLATGD 237
Query: 245 FDDHALFLSGKPDIAMRRL 263
D + S PD + L
Sbjct: 238 ARDTVYWSSDIPDNFRKIL 256
>gi|23099563|ref|NP_693029.1| glutamate racemase [Oceanobacillus iheyensis HTE831]
gi|29839537|sp|Q8EPJ4|MURI_OCEIH RecName: Full=Glutamate racemase
gi|22777793|dbj|BAC14064.1| glutamate racemase [Oceanobacillus iheyensis HTE831]
Length = 274
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 52/254 (20%), Positives = 99/254 (38%), Gaps = 5/254 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ SI + DSG+GGL V+ ++ +P+ IY+ D PYG +++ + +
Sbjct: 1 MDKSIGVIDSGVGGLTVVHELMRQLPKEQLIYLGDTARCPYGPRSKEEVRQFTWEMVDFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K + V+ACNTA +L+ P + A T + + ++ T T
Sbjct: 61 LTK-NIKMLVVACNTATAFTLKDLKEQLDIPVIGVIQPGARAAIKSTTNNQVGVIGTEGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ S + S + ++ VE + + + + K
Sbjct: 120 ISSGAYSQALEKIKSDIQVSGLACPPFVPMVERGVLSGPEAKAVVSEALRPF---SNNKE 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHAL 250
D ++L CTHYPL+ +++ V + +S+ AR LL + + H
Sbjct: 177 MDTLILGCTHYPLLKSTIQEVMGEEVTVISSSEETARETSTLLDVHQIMNRSDLVPLHQF 236
Query: 251 FLSGKPDIAMRRLM 264
+ +G +I +
Sbjct: 237 YTTGDLEIFIEIAK 250
>gi|29375697|ref|NP_814851.1| glutamate racemase [Enterococcus faecalis V583]
gi|81585411|sp|Q836J0|MURI_ENTFA RecName: Full=Glutamate racemase
gi|29343158|gb|AAO80921.1| glutamate racemase [Enterococcus faecalis V583]
Length = 273
Score = 252 bits (643), Expect = 5e-65, Method: Composition-based stats.
Identities = 59/264 (22%), Positives = 104/264 (39%), Gaps = 7/264 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
Q +I + DSG+GGL VL++ +P IY+ D PYG + + +
Sbjct: 1 MSNQEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWE-MA 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
D L K + + VIACNTA + +E+++ P +P + A T++ I ++ T
Sbjct: 60 DFLLKKRIKMLVIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKNNKIGVIGTL 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ I S + + VE + + KK + +
Sbjct: 120 GTIKSASYEIAIKSKAPTIEVTSLDCPKFVPIVE----SNQYRSSVAKKIVAETLQALQL 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-- 247
K D ++L CTHYPL+ V + + V +D+ LL + T
Sbjct: 176 KGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDIAHTPEAPTQP 235
Query: 248 HALFLSGKPDIAMRRLMQGFGLKS 271
H + +G + G+++
Sbjct: 236 HEFYTTGSAKMFEEIASSWLGIEN 259
>gi|315573713|gb|EFU85904.1| glutamate racemase [Enterococcus faecalis TX0309B]
gi|315582672|gb|EFU94863.1| glutamate racemase [Enterococcus faecalis TX0309A]
Length = 275
Score = 252 bits (643), Expect = 5e-65, Method: Composition-based stats.
Identities = 59/264 (22%), Positives = 104/264 (39%), Gaps = 7/264 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
Q +I + DSG+GGL VL++ +P IY+ D PYG + + +
Sbjct: 3 MSNQEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFTWE-MA 61
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
D L K + + VIACNTA + +E+++ P +P + A T++ I ++ T
Sbjct: 62 DFLLKKRIKMLVIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKNNKIGVIGTL 121
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ I S + + VE + + KK + +
Sbjct: 122 GTIKSASYEIAIKSKAPTIEVTSLDCPKFVPIVE----SNQYRSSVAKKIVAETLQALQL 177
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-- 247
K D ++L CTHYPL+ V + + V +D+ LL + T
Sbjct: 178 KGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDIAHTPEAPTQP 237
Query: 248 HALFLSGKPDIAMRRLMQGFGLKS 271
H + +G + G+++
Sbjct: 238 HEFYTTGSAKMFEEIASSWLGIEN 261
>gi|325570406|ref|ZP_08146183.1| glutamate racemase [Enterococcus casseliflavus ATCC 12755]
gi|325156616|gb|EGC68793.1| glutamate racemase [Enterococcus casseliflavus ATCC 12755]
Length = 277
Score = 252 bits (643), Expect = 5e-65, Method: Composition-based stats.
Identities = 54/265 (20%), Positives = 96/265 (36%), Gaps = 8/265 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I DSG+GGL V+++ +P +Y+ D PYG + +
Sbjct: 7 MTNNRPIGFIDSGVGGLTVVKEAIKQLPNESILYLGDTARCPYGPRPAEQVIAYTWQ-MT 65
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L + + VIACNTA + +E++ +P + A +++ I ++ T
Sbjct: 66 RFLLEKNIKMLVIACNTATAVALEEIKEKLAIPVIGVILPGSRAAVKASKNQRIGVIGTN 125
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ +H + ++ VE + KK + +
Sbjct: 126 GTIKSDSYKRALHGKAPHASVVSLACPKFVPIVESK----QYHSSVAKKIVAETLRPLKN 181
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR---VFD 246
KR D ++L CTHYPL+ + + + +D+ LL + T
Sbjct: 182 KRLDTVILGCTHYPLLRPLIQNELGAHIQLIDSGAETVGEVSTLLDYFSIAATSQDDPHP 241
Query: 247 DHALFLSGKPDIAMRRLMQGFGLKS 271
HA F +G P I L +
Sbjct: 242 QHAFFTTGSPKIFDEIANDWLDLDT 266
>gi|320325693|gb|EFW81754.1| glutamate racemase [Pseudomonas syringae pv. glycinea str. B076]
gi|320327388|gb|EFW83402.1| glutamate racemase [Pseudomonas syringae pv. glycinea str. race 4]
gi|330881879|gb|EGH16028.1| glutamate racemase [Pseudomonas syringae pv. glycinea str. race 4]
Length = 271
Score = 252 bits (643), Expect = 5e-65, Method: Composition-based stats.
Identities = 68/259 (26%), Positives = 120/259 (46%), Gaps = 9/259 (3%)
Query: 9 EKKLQN----SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64
+ ++ + + IFDSG+GGL VL ++R L+P +Y+AD PYG + +R
Sbjct: 3 DMQMSHASDAPVAIFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTPEFITERC 62
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
+ + + V+ACNTA +R +P +G PA+K AA T+SG++
Sbjct: 63 LTIAGFFR-EQGAKALVVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVG 121
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+L+T TL+ + L+ + + + L +E + +I++ +
Sbjct: 122 VLATTGTLQSARFAALLDRFANDVRVVTQPCPGLVELIET----GDLLSPQIRQLLLHYV 177
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
R D I+L CTHYP + + R++ P V +D ++AR+ + LL R + T
Sbjct: 178 EPLLAARCDTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSSLLATGT 237
Query: 245 FDDHALFLSGKPDIAMRRL 263
+ + S PD + L
Sbjct: 238 ARETMYWSSDIPDNFRKIL 256
>gi|69246346|ref|ZP_00603902.1| Glutamate racemase [Enterococcus faecium DO]
gi|257878166|ref|ZP_05657819.1| glutamate racemase [Enterococcus faecium 1,230,933]
gi|257881050|ref|ZP_05660703.1| glutamate racemase [Enterococcus faecium 1,231,502]
gi|257889635|ref|ZP_05669288.1| glutamate racemase [Enterococcus faecium 1,231,410]
gi|257892425|ref|ZP_05672078.1| glutamate racemase [Enterococcus faecium 1,231,408]
gi|258616328|ref|ZP_05714098.1| glutamate racemase [Enterococcus faecium DO]
gi|289565821|ref|ZP_06446263.1| glutamate racemase [Enterococcus faecium D344SRF]
gi|293563127|ref|ZP_06677592.1| glutamate racemase [Enterococcus faecium E1162]
gi|293569788|ref|ZP_06680875.1| glutamate racemase [Enterococcus faecium E1071]
gi|294614005|ref|ZP_06693935.1| glutamate racemase [Enterococcus faecium E1636]
gi|294617100|ref|ZP_06696766.1| glutamate racemase [Enterococcus faecium E1679]
gi|294623311|ref|ZP_06702173.1| glutamate racemase [Enterococcus faecium U0317]
gi|68195299|gb|EAN09750.1| Glutamate racemase [Enterococcus faecium DO]
gi|257812394|gb|EEV41152.1| glutamate racemase [Enterococcus faecium 1,230,933]
gi|257816708|gb|EEV44036.1| glutamate racemase [Enterococcus faecium 1,231,502]
gi|257825995|gb|EEV52621.1| glutamate racemase [Enterococcus faecium 1,231,410]
gi|257828804|gb|EEV55411.1| glutamate racemase [Enterococcus faecium 1,231,408]
gi|289162364|gb|EFD10222.1| glutamate racemase [Enterococcus faecium D344SRF]
gi|291587536|gb|EFF19413.1| glutamate racemase [Enterococcus faecium E1071]
gi|291593112|gb|EFF24691.1| glutamate racemase [Enterococcus faecium E1636]
gi|291596637|gb|EFF27864.1| glutamate racemase [Enterococcus faecium E1679]
gi|291597279|gb|EFF28468.1| glutamate racemase [Enterococcus faecium U0317]
gi|291604905|gb|EFF34374.1| glutamate racemase [Enterococcus faecium E1162]
Length = 277
Score = 251 bits (642), Expect = 6e-65, Method: Composition-based stats.
Identities = 53/259 (20%), Positives = 99/259 (38%), Gaps = 7/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V+++ +P + ++V D PYG + + +D L
Sbjct: 11 NRPIGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQVIQYTWE-MTDYL 69
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACNTA + +E+++ +P + A TQ+ + I+ T T+
Sbjct: 70 VEQGIKMLVIACNTATAVALEEIKAALSIPVIGVILPGTRAAVKKTQNKQVGIIGTIGTV 129
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + V + + ++ S VE + KK + K+
Sbjct: 130 KSQAYEKALKEKVPELTVTSLACPKFVSVVESNEYHSSV----AKKIVAETLAPLTTKKI 185
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--AL 250
D ++L CTHYPL+ + + + V +D+ LL N +
Sbjct: 186 DTLILGCTHYPLLRPIIQNVMGENVQLIDSGAETVGEVSMLLDYFNLSNSPQNGRTLCQF 245
Query: 251 FLSGKPDIAMRRLMQGFGL 269
+ +G + G+
Sbjct: 246 YTTGSAKLFEEIAEDWLGI 264
>gi|257884711|ref|ZP_05664364.1| glutamate racemase [Enterococcus faecium 1,231,501]
gi|257820549|gb|EEV47697.1| glutamate racemase [Enterococcus faecium 1,231,501]
Length = 277
Score = 251 bits (642), Expect = 6e-65, Method: Composition-based stats.
Identities = 53/259 (20%), Positives = 98/259 (37%), Gaps = 7/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V+++ +P + ++V D PYG + + +D L
Sbjct: 11 NRPIGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQVIQYTWE-MTDYL 69
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA + +E+++ +P + A TQ+ + I+ T T+
Sbjct: 70 VDQGIKMLVIACNTATAVALEEIKAALSIPVIGVILPGTRAAVKKTQNKQVGIIGTIGTV 129
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + V + + ++ S VE + KK + K+
Sbjct: 130 KSRAYEKALKEKVPELTVTSLACPKFVSVVESNEYHSSV----AKKIVAETLAPLTTKKI 185
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--AL 250
D ++L CTHYPL+ + + + V +D+ LL N +
Sbjct: 186 DTLILGCTHYPLLRPIIQNVMGENVQLIDSGAETVGEVSMLLDYFNLSNSPQNGRTLCQF 245
Query: 251 FLSGKPDIAMRRLMQGFGL 269
+ +G + G+
Sbjct: 246 YTTGSAKLFEEIAEDWLGI 264
>gi|227552906|ref|ZP_03982955.1| glutamate racemase [Enterococcus faecalis HH22]
gi|227177960|gb|EEI58932.1| glutamate racemase [Enterococcus faecalis HH22]
Length = 275
Score = 251 bits (642), Expect = 6e-65, Method: Composition-based stats.
Identities = 59/264 (22%), Positives = 104/264 (39%), Gaps = 7/264 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
Q +I + DSG+GGL VL++ +P IY+ D PYG + + +
Sbjct: 3 MSNQEAIGLIDSGVGGLTVLKEALKQLPNERLIYLGDTARCPYGPRPAEQVVQFSWE-MA 61
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
D L K + + VIACNTA + +E+++ P +P + A T++ I ++ T
Sbjct: 62 DFLLKKRIKMLVIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVTKNNKIGVIGTL 121
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ I S + + VE + + KK + +
Sbjct: 122 GTIKSASYEIAIKSKAPTIEVTSLDCPKFVPIVE----SNQYRSSVAKKIVAETLQALQL 177
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-- 247
K D ++L CTHYPL+ V + + V +D+ LL + T
Sbjct: 178 KGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSMLLDYFDIAHTPEAPTQP 237
Query: 248 HALFLSGKPDIAMRRLMQGFGLKS 271
H + +G + G+++
Sbjct: 238 HEFYTTGSAKMFEEIASSWLGIEN 261
>gi|328946845|gb|EGG40982.1| glutamate racemase [Streptococcus sanguinis SK1087]
Length = 264
Score = 251 bits (642), Expect = 6e-65, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 103/260 (39%), Gaps = 8/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P IY+ D PYG ++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRAYTWQLVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNTA ++ +E++ +P A T SG I ++ TP T+
Sbjct: 63 TK-DVKMIVIACNTATAVVWEEVKEKLDIPVLGVILPGASAAIKSTASGRIGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + + + ++ VE + + + + ++ R
Sbjct: 122 SSDIYRQKIEALSPEMQVESLACPKFVPLVESNELHSSLTKKVVYETLQP-----LAGRV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHAL 250
D +VL CTHYPL+ + + V +D+ R LL +++R + +H
Sbjct: 177 DTLVLGCTHYPLLRPIIQNRMGPNVKLIDSGAECVRDISVLLNYFEINRSREKEELNHQF 236
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
+ + GLK
Sbjct: 237 YTTANAKSFSEIAESWLGLK 256
>gi|260559213|ref|ZP_05831399.1| glutamate racemase [Enterococcus faecium C68]
gi|261207746|ref|ZP_05922431.1| glutamate racemase [Enterococcus faecium TC 6]
gi|314939892|ref|ZP_07847098.1| glutamate racemase [Enterococcus faecium TX0133a04]
gi|314943739|ref|ZP_07850478.1| glutamate racemase [Enterococcus faecium TX0133C]
gi|314949695|ref|ZP_07853013.1| glutamate racemase [Enterococcus faecium TX0082]
gi|314953241|ref|ZP_07856180.1| glutamate racemase [Enterococcus faecium TX0133A]
gi|314993679|ref|ZP_07859027.1| glutamate racemase [Enterococcus faecium TX0133B]
gi|314997404|ref|ZP_07862355.1| glutamate racemase [Enterococcus faecium TX0133a01]
gi|260074970|gb|EEW63286.1| glutamate racemase [Enterococcus faecium C68]
gi|260078129|gb|EEW65835.1| glutamate racemase [Enterococcus faecium TC 6]
gi|313588539|gb|EFR67384.1| glutamate racemase [Enterococcus faecium TX0133a01]
gi|313591853|gb|EFR70698.1| glutamate racemase [Enterococcus faecium TX0133B]
gi|313594707|gb|EFR73552.1| glutamate racemase [Enterococcus faecium TX0133A]
gi|313597602|gb|EFR76447.1| glutamate racemase [Enterococcus faecium TX0133C]
gi|313640855|gb|EFS05435.1| glutamate racemase [Enterococcus faecium TX0133a04]
gi|313643953|gb|EFS08533.1| glutamate racemase [Enterococcus faecium TX0082]
Length = 273
Score = 251 bits (642), Expect = 7e-65, Method: Composition-based stats.
Identities = 53/259 (20%), Positives = 99/259 (38%), Gaps = 7/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V+++ +P + ++V D PYG + + +D L
Sbjct: 7 NRPIGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQVIQYTWE-MTDYL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACNTA + +E+++ +P + A TQ+ + I+ T T+
Sbjct: 66 VEQGIKMLVIACNTATAVALEEIKAALSIPVIGVILPGTRAAVKKTQNKQVGIIGTIGTV 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + V + + ++ S VE + KK + K+
Sbjct: 126 KSQAYEKALKEKVPELTVTSLACPKFVSVVESNEYHSSV----AKKIVAETLAPLTTKKI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--AL 250
D ++L CTHYPL+ + + + V +D+ LL N +
Sbjct: 182 DTLILGCTHYPLLRPIIQNVMGENVQLIDSGAETVGEVSMLLDYFNLSNSPQNGRTLCQF 241
Query: 251 FLSGKPDIAMRRLMQGFGL 269
+ +G + G+
Sbjct: 242 YTTGSAKLFEEIAEDWLGI 260
>gi|71733288|ref|YP_273271.1| glutamate racemase [Pseudomonas syringae pv. phaseolicola 1448A]
gi|71553841|gb|AAZ33052.1| glutamate racemase [Pseudomonas syringae pv. phaseolicola 1448A]
Length = 271
Score = 251 bits (642), Expect = 7e-65, Method: Composition-based stats.
Identities = 67/259 (25%), Positives = 119/259 (45%), Gaps = 9/259 (3%)
Query: 9 EKKLQN----SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64
+ ++ + + IFDSG+GGL VL ++R L+P +Y+AD PYG + +R
Sbjct: 3 DMQMSHASDAPVAIFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTPEFITERC 62
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
+ + + V+ACNTA +R +P +G PA+K AA T+SG++
Sbjct: 63 LTIAGFFR-EQGAKALVVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVG 121
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+L+T TL+ + L+ + + + L +E + +I++ +
Sbjct: 122 VLATTGTLQSARFAALLDRFANDVRVVTQPCPGLVELIET----GDLLSPQIRRLLLHYV 177
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
D I+L CTHYP + + R++ P V +D ++AR+ + LL R + T
Sbjct: 178 EPLLAACCDTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSSLLATGT 237
Query: 245 FDDHALFLSGKPDIAMRRL 263
+ + S PD + L
Sbjct: 238 ARETMYWSSDIPDNFRKIL 256
>gi|315302795|ref|ZP_07873560.1| glutamate racemase [Listeria ivanovii FSL F6-596]
gi|313628832|gb|EFR97200.1| glutamate racemase [Listeria ivanovii FSL F6-596]
Length = 266
Score = 251 bits (642), Expect = 7e-65, Method: Composition-based stats.
Identities = 52/257 (20%), Positives = 96/257 (37%), Gaps = 6/257 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I DSG+GGL V++++ +P Y+ D PYG + +++ ++
Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQIYYLGDTARCPYGPRDKEEVRQFTWE-MTNF 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + VIACNTA ++R+ P + A T++ I +L T T
Sbjct: 60 LVDRGIKMLVIACNTATAAALYDIRAKLDIPVIGVIQPGSRAALKATRNNKIGVLGTIGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + + ++ S VE KK + + + +
Sbjct: 120 VESMAYPRALKGLNRRVEVDSLACPKFVSVVESGEYK----SAIAKKVVAESLLPLKSTK 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHAL 250
D ++L CTHYPL+ + V +++ + A LL N + H
Sbjct: 176 IDTVILGCTHYPLLKPIIENFMGDDVAVINSGEETASEVSALLDYHNLLDASDKEIQHRF 235
Query: 251 FLSGKPDIAMRRLMQGF 267
F +G I
Sbjct: 236 FTTGSTQIFQDIAXXWL 252
>gi|151567725|pdb|2JFU|A Chain A, Crystal Structure Of Enterococcus Faecium Glutamate
Racemase In Complex With Phosphate
gi|151567726|pdb|2JFV|A Chain A, Crystal Structure Of Enterococcus Faecium Glutamate
Racemase In Complex With Citrate
gi|151567727|pdb|2JFW|A Chain A, Crystal Structure Of Enterococcus Faecium Glutamate
Racemase In Complex With Tartrate
Length = 291
Score = 251 bits (642), Expect = 7e-65, Method: Composition-based stats.
Identities = 53/259 (20%), Positives = 99/259 (38%), Gaps = 7/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V+++ +P + ++V D PYG + + +D L
Sbjct: 25 NRPIGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQVIQYTWE-MTDYL 83
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACNTA + +E+++ +P + A TQ+ + I+ T T+
Sbjct: 84 VEQGIKMLVIACNTATAVALEEIKAALSIPVIGVILPGTRAAVKKTQNKQVGIIGTIGTV 143
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + V + + ++ S VE + KK + K+
Sbjct: 144 KSQAYEKALKEKVPELTVTSLACPKFVSVVESNEYHSSV----AKKIVAETLAPLTTKKI 199
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--AL 250
D ++L CTHYPL+ + + + V +D+ LL N +
Sbjct: 200 DTLILGCTHYPLLRPIIQNVMGENVQLIDSGAETVGEVSMLLDYFNLSNSPQNGRTLCQF 259
Query: 251 FLSGKPDIAMRRLMQGFGL 269
+ +G + G+
Sbjct: 260 YTTGSAKLFEEIAEDWLGI 278
>gi|261408424|ref|YP_003244665.1| glutamate racemase [Paenibacillus sp. Y412MC10]
gi|329928213|ref|ZP_08282144.1| glutamate racemase [Paenibacillus sp. HGF5]
gi|261284887|gb|ACX66858.1| glutamate racemase [Paenibacillus sp. Y412MC10]
gi|328937981|gb|EGG34381.1| glutamate racemase [Paenibacillus sp. HGF5]
Length = 268
Score = 251 bits (641), Expect = 9e-65, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 104/258 (40%), Gaps = 6/258 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+Q +I I DSG+GGL V +++ +P IY D PYG ++ +
Sbjct: 1 MQQAIAILDSGVGGLTVAKEVMRQLPREKIIYFGDTARAPYGPRTPEEVRLFTEQIVD-Y 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L +Y P + VIACNTA D + S P P + A + T++G + ++ T T
Sbjct: 60 LIQYDPKMIVIACNTATAAALDYISSKVPVPVIGVIHPGARAAISATKTGHVGVIGTVGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + + + L VE K +++ + G +
Sbjct: 120 IGSGAYTAALKQLSPYIGVESQACPELVPLVEHGLFRSKDSLQVVERSLRGI----KDTS 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHAL 250
D ++L CTHYP +++ + + V + ++D AR +L + H
Sbjct: 176 IDCLILGCTHYPFLMNTIQTVMGPNVKLISSADETAREVSTILYDKGQLASSMEGPVHQF 235
Query: 251 FLSGKPDIAMRRLMQGFG 268
F +G P+I + G
Sbjct: 236 FCTGDPEIFQSIATEWLG 253
>gi|323703720|ref|ZP_08115360.1| glutamate racemase [Desulfotomaculum nigrificans DSM 574]
gi|323531308|gb|EGB21207.1| glutamate racemase [Desulfotomaculum nigrificans DSM 574]
Length = 268
Score = 251 bits (640), Expect = 9e-65, Method: Composition-based stats.
Identities = 71/255 (27%), Positives = 120/255 (47%), Gaps = 7/255 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I IFDSG+GGL V +++R L+P IY AD PYG+ + +++R + +
Sbjct: 1 MSQTAPIGIFDSGVGGLSVAREIRRLLPMEDIIYYADSAFCPYGDKDPEVIRRREIAIVD 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L + V+ACNTA + D+LR FP + +G PA+K A A T++G I IL+T
Sbjct: 61 -FLLSQGAKMIVVACNTASSTGLDDLRKMFP-VPIVGMEPAVKPAVAATRNGKIGILATS 118
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ ++LI + ++ L RVE ++ + E +K + G
Sbjct: 119 VTIAGERLASLIKRFAEHVNVITQPCPGLVERVEH----GQLDDPETEKILAGFLKPILE 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDH 248
++ D IVL CTHYP + + ++ + +D +++A++ +L N
Sbjct: 175 QQADTIVLGCTHYPFLTPLIEKIVGPNIAIIDTGEAVAKQVSRVLNEHNLAVHEPRVGQE 234
Query: 249 ALFLSGKPDIAMRRL 263
F SG + +
Sbjct: 235 KFFTSGNQVEVAKVI 249
>gi|327470419|gb|EGF15875.1| glutamate racemase [Streptococcus sanguinis SK330]
Length = 264
Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 102/260 (39%), Gaps = 8/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P IY+ D PYG ++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRAYTWQLVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNTA ++ +E++ +P A T SG I ++ TP T+
Sbjct: 63 TK-DVKMIVIACNTATAVVWEEVKEKLDIPVLGVILPGASAAIKSTASGRIGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + + + ++ VE + + + + ++ R
Sbjct: 122 SSDIYRQKIEALSPEMQVDSLACPKFVPLVESNELHSSLTKKVVYETLQP-----LAGRV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHAL 250
D +VL CTHYPL+ + + V +D+ R LL +++R +H
Sbjct: 177 DTLVLGCTHYPLLRPIIQNRMGPNVKLIDSGAECVRDISVLLNYFEINRSREKQELNHQF 236
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
+ + GLK
Sbjct: 237 YTTANAKSFSEIAESWLGLK 256
>gi|163843460|ref|YP_001627864.1| glutamate racemase [Brucella suis ATCC 23445]
gi|189030357|sp|B0CGZ3|MURI_BRUSI RecName: Full=Glutamate racemase
gi|163674183|gb|ABY38294.1| glutamate racemase [Brucella suis ATCC 23445]
Length = 277
Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats.
Identities = 141/272 (51%), Positives = 196/272 (72%), Gaps = 3/272 (1%)
Query: 2 KIDNYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHA 59
++P + + + IL+FDSGIGGL VL++ R +MP+ F+Y+ADD GFPYGNWE+ A
Sbjct: 5 PAGSFPAKPTIAPERPILVFDSGIGGLTVLREARVVMPDRRFVYIADDAGFPYGNWEEEA 64
Query: 60 LKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119
LK+R++ LF + + Y P ++VIACNTA TL+ ++LR +PS+ F+G VPAIK AA T
Sbjct: 65 LKRRIIELFGEFIANYDPEIAVIACNTASTLVLEDLRRAYPSVPFVGMVPAIKPAAERTS 124
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
SGL+S+L+TP T++R YT +LI S+ S+CH+ LV + LA+ E + G E + +
Sbjct: 125 SGLVSVLATPGTVKRAYTRDLIQSFASRCHVRLVGADGLAAIAEAHIRGESFDEALVMAQ 184
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RIN 238
I CFIEK+GKRTD++VLACTHYP +V+V R+L+PWPVDWLD +++IARR + LLP R +
Sbjct: 185 IAPCFIEKDGKRTDIVVLACTHYPFLVNVLRRLAPWPVDWLDPAEAIARRMKSLLPARSD 244
Query: 239 THQTRVFDDHALFLSGKPDIAMRRLMQGFGLK 270
+ DD A F S KPD A+RRLMQGFGL+
Sbjct: 245 DDEFHSQDDLAFFTSRKPDYAIRRLMQGFGLR 276
>gi|323351014|ref|ZP_08086671.1| glutamate racemase [Streptococcus sanguinis VMC66]
gi|322122738|gb|EFX94447.1| glutamate racemase [Streptococcus sanguinis VMC66]
Length = 264
Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 102/260 (39%), Gaps = 8/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P IY+ D PYG ++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRAYTWQLVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNTA ++ +E++ +P A T SG I ++ TP T+
Sbjct: 63 TK-DVKMIVIACNTATAVVWEEVKEKLDIPVLGVILPGASAAIKSTASGRIGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + + + ++ VE + + + + ++ +
Sbjct: 122 SSDIYRQKIEALSPEMQVESLACPKFVPLVESNELHSSLTKKVVYETLQP-----LAGQV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHAL 250
D +VL CTHYPL+ + + V +D+ R LL +++R +H
Sbjct: 177 DTLVLGCTHYPLLRPIIQNRMGPNVKLIDSGAECVRDISVLLNYFEINRSREKQELNHQF 236
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
+ + GLK
Sbjct: 237 YTTANAKSFSEIAESWLGLK 256
>gi|324993660|gb|EGC25579.1| glutamate racemase [Streptococcus sanguinis SK405]
gi|324995028|gb|EGC26941.1| glutamate racemase [Streptococcus sanguinis SK678]
gi|327462929|gb|EGF09250.1| glutamate racemase [Streptococcus sanguinis SK1]
gi|327474533|gb|EGF19938.1| glutamate racemase [Streptococcus sanguinis SK408]
gi|332359127|gb|EGJ36948.1| glutamate racemase [Streptococcus sanguinis SK49]
gi|332362249|gb|EGJ40049.1| glutamate racemase [Streptococcus sanguinis SK1056]
Length = 264
Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 102/260 (39%), Gaps = 8/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P IY+ D PYG ++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRAYTWQLVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNTA ++ +E++ +P A T SG I ++ TP T+
Sbjct: 63 TK-DVKMIVIACNTATAVVWEEVKEKLDIPVLGVILPGASAAIKSTASGRIGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + + + ++ VE + + + + ++ R
Sbjct: 122 SSDIYRQKIEALSPEMQVESLACPKFVPLVESNELHSSLTKKVVYETLQP-----LAGRV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHAL 250
D +VL CTHYPL+ + + V +D+ R LL +++R +H
Sbjct: 177 DTLVLGCTHYPLLRPIIQNRMGPNVKLIDSGAECVRDISVLLNYFEINRSREKQELNHQF 236
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
+ + GLK
Sbjct: 237 YTTANAKSFSEIAESWLGLK 256
>gi|52786718|ref|YP_092547.1| glutamate racemase [Bacillus licheniformis ATCC 14580]
gi|319647248|ref|ZP_08001470.1| RacE protein [Bacillus sp. BT1B_CT2]
gi|52349220|gb|AAU41854.1| RacE [Bacillus licheniformis ATCC 14580]
gi|317390595|gb|EFV71400.1| RacE protein [Bacillus sp. BT1B_CT2]
Length = 272
Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats.
Identities = 52/260 (20%), Positives = 103/260 (39%), Gaps = 5/260 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L I + DSG+GGL V +++ +P+ IY+ D PYG + + + + +
Sbjct: 2 LDQPIGVIDSGVGGLTVAKEIMRQLPKEKIIYLGDTKRCPYGPRDRKEVLSYTWEMTNYL 61
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L ++ + VIACNTA + +E+ P + A T++ I ++ T T
Sbjct: 62 LSRHHIKMLVIACNTATAIALEEISREVAIPVIGVVQPGARTAIKVTENQRIGVIGTENT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + S + ++ + VE K ++ + +
Sbjct: 122 IKSGAYEEALLSLNGDLTVENLACPMFVPFVE----SGKFLDETADEIVRTSLHPLRDSS 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHAL 250
D ++L CTHYP++ ++ V+ + + D AR +L +T +H
Sbjct: 178 IDTLILGCTHYPILKEPIQRYMGERVNIISSGDETAREVSTILSYNGLLSKTAEPPEHLF 237
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
+G+ + FG +
Sbjct: 238 LTTGERARFTKIANDWFGYE 257
>gi|254701935|ref|ZP_05163763.1| glutamate racemase [Brucella suis bv. 5 str. 513]
gi|261752501|ref|ZP_05996210.1| glutamate racemase [Brucella suis bv. 5 str. 513]
gi|261742254|gb|EEY30180.1| glutamate racemase [Brucella suis bv. 5 str. 513]
Length = 277
Score = 251 bits (640), Expect = 1e-64, Method: Composition-based stats.
Identities = 140/272 (51%), Positives = 195/272 (71%), Gaps = 3/272 (1%)
Query: 2 KIDNYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHA 59
++P + + + IL+FDSGIGGL VL++ R +MP+ F+Y+ADD GFPYGN E+ A
Sbjct: 5 PAGSFPAKPTIAPERPILVFDSGIGGLTVLREARVVMPDRRFVYIADDAGFPYGNREEEA 64
Query: 60 LKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119
LK+R++ LF + + Y P ++VIACNTA TL+ ++LR +PS+ F+G VPAIK AA T
Sbjct: 65 LKRRIIELFGEFIANYDPEIAVIACNTASTLVLEDLRRAYPSVPFVGTVPAIKPAAERTS 124
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
SGL+S+L+TP T++R YT +LI S+ S+CH+ LV + LA+ E + G E + +
Sbjct: 125 SGLVSVLATPGTVKRAYTRDLIQSFASRCHVRLVGADGLAAIAEAHIRGESFDEALVMAQ 184
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RIN 238
I CFIEK+GKRTD++VLACTHYP +V+V R+L+PWPVDWLD +++IARR + LLP R +
Sbjct: 185 IAPCFIEKDGKRTDIVVLACTHYPFLVNVLRRLAPWPVDWLDPAEAIARRMKSLLPARSD 244
Query: 239 THQTRVFDDHALFLSGKPDIAMRRLMQGFGLK 270
+ DD A F S KPD A+RRLMQGFGL+
Sbjct: 245 DDEFHSQDDLAFFTSRKPDYAIRRLMQGFGLR 276
>gi|324991303|gb|EGC23236.1| glutamate racemase [Streptococcus sanguinis SK353]
gi|325687120|gb|EGD29143.1| glutamate racemase [Streptococcus sanguinis SK72]
Length = 264
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 102/260 (39%), Gaps = 8/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P IY+ D PYG ++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRAYTWQLVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNTA ++ +E++ +P A T SG I ++ TP T+
Sbjct: 63 TK-DVKMIVIACNTATAVVWEEVKEKLDIPVLGVILPGASAAIKSTASGRIGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + + + ++ VE + + + + ++ R
Sbjct: 122 SSDIYRQKIEALSPEMQVESLACPKFVPLVESNELHSSLTKKVVYETLQP-----LAGRV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHAL 250
D +VL CTHYPL+ + + V +D+ R LL +++R +H
Sbjct: 177 DTLVLGCTHYPLLRPIIQNRMGPDVKLIDSGAECVRDISVLLNYFEINRSREKQELNHQF 236
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
+ + GLK
Sbjct: 237 YTTANAKSFSEIAESWLGLK 256
>gi|257887546|ref|ZP_05667199.1| glutamate racemase [Enterococcus faecium 1,141,733]
gi|257896041|ref|ZP_05675694.1| glutamate racemase [Enterococcus faecium Com12]
gi|293378787|ref|ZP_06624944.1| glutamate racemase [Enterococcus faecium PC4.1]
gi|257823600|gb|EEV50532.1| glutamate racemase [Enterococcus faecium 1,141,733]
gi|257832606|gb|EEV59027.1| glutamate racemase [Enterococcus faecium Com12]
gi|292642580|gb|EFF60733.1| glutamate racemase [Enterococcus faecium PC4.1]
Length = 281
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 53/259 (20%), Positives = 99/259 (38%), Gaps = 7/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V+++ +P + ++V D PYG + + +D L
Sbjct: 11 NRPIGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQVIQYTWE-MTDYL 69
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACNTA + +E+++ +P + A TQ+ + I+ T T+
Sbjct: 70 VEQGIKMLVIACNTATAVALEEIKAALSIPVIGVILPGTRAAVKKTQNKQVGIIGTIGTV 129
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + V + + ++ S VE + KK + K+
Sbjct: 130 KSQAYEKALKEKVPELTVTSLACPKFVSVVESNEYHSSV----AKKIVAETLAPLTTKKI 185
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--AL 250
D ++L CTHYPL+ + + + V +D+ LL N +
Sbjct: 186 DTLILGCTHYPLLRPIIQNVVGENVQLIDSGAETVGEVSMLLDYFNLSNSPQNGRTLCQF 245
Query: 251 FLSGKPDIAMRRLMQGFGL 269
+ +G + G+
Sbjct: 246 YTTGSAKLFQEIAEDWLGI 264
>gi|227551339|ref|ZP_03981388.1| glutamate racemase [Enterococcus faecium TX1330]
gi|227179550|gb|EEI60522.1| glutamate racemase [Enterococcus faecium TX1330]
Length = 277
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 53/259 (20%), Positives = 99/259 (38%), Gaps = 7/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V+++ +P + ++V D PYG + + +D L
Sbjct: 7 NRPIGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQVIQYTWE-MTDYL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACNTA + +E+++ +P + A TQ+ + I+ T T+
Sbjct: 66 VEQGIKMLVIACNTATAVALEEIKAALSIPVIGVILPGTRAAVKKTQNKQVGIIGTIGTV 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + V + + ++ S VE + KK + K+
Sbjct: 126 KSQAYEKALKEKVPELTVTSLACPKFVSVVESNEYHSSV----AKKIVAETLAPLTTKKI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--AL 250
D ++L CTHYPL+ + + + V +D+ LL N +
Sbjct: 182 DTLILGCTHYPLLRPIIQNVVGENVQLIDSGAETVGEVSMLLDYFNLSNSPQNGRTLCQF 241
Query: 251 FLSGKPDIAMRRLMQGFGL 269
+ +G + G+
Sbjct: 242 YTTGSAKLFQEIAEDWLGI 260
>gi|330887861|gb|EGH20522.1| glutamate racemase [Pseudomonas syringae pv. mori str. 301020]
Length = 271
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 69/259 (26%), Positives = 120/259 (46%), Gaps = 9/259 (3%)
Query: 9 EKKLQN----SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64
+ ++ + + IFDSG+GGL VL ++R L+P +Y+AD PYG + +R
Sbjct: 3 DMQMSHASDAPVAIFDSGVGGLSVLNEIRQLLPSESLLYLADCGHIPYGEKTTEFITERC 62
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
+ + + V+ACNTA +R +P +G PA+K AA T+SG++
Sbjct: 63 LTIAGFFR-EQGAKALVVACNTATAAGVAHIRQRYPDWPIVGMEPAVKPAAEATRSGVVG 121
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+L+T TL+ + L+ + + + L +E + +I++ +
Sbjct: 122 VLATTGTLQSARFAALLDRFANDVRVVTQPCPGLVELIET----GDLLSPQIRQLLLHYV 177
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
R D I+L CTHYP + + R++ P V +D ++AR+ + LL R + T
Sbjct: 178 EPLLAARCDTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLSRSSLLATGD 237
Query: 245 FDDHALFLSGKPDIAMRRL 263
D + S PD + L
Sbjct: 238 ARDTVYWSSDIPDNFRKIL 256
>gi|257898669|ref|ZP_05678322.1| glutamate racemase [Enterococcus faecium Com15]
gi|257836581|gb|EEV61655.1| glutamate racemase [Enterococcus faecium Com15]
Length = 273
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 53/259 (20%), Positives = 99/259 (38%), Gaps = 7/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V+++ +P + ++V D PYG + + +D L
Sbjct: 7 NRPIGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQVIQYTWE-MTDYL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACNTA + +E+++ +P + A TQ+ + I+ T T+
Sbjct: 66 VEQGIKMLVIACNTATAVALEEIKAALSIPVIGVILPGTRAAVKKTQNKQVGIIGTIGTV 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + V + + ++ S VE + KK + K+
Sbjct: 126 KSQAYEKALKEKVPELTVTSLACPKFVSVVESNEYHSSV----AKKIVAETLAPLTTKKI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--AL 250
D ++L CTHYPL+ + + + V +D+ LL N +
Sbjct: 182 DTLILGCTHYPLLRPIIQNVVGENVQLIDSGAETVGEVSMLLDYFNLSNSPQNGRTLCQF 241
Query: 251 FLSGKPDIAMRRLMQGFGL 269
+ +G + G+
Sbjct: 242 YTTGSAKLFQEIAEDWLGI 260
>gi|332358334|gb|EGJ36160.1| glutamate racemase [Streptococcus sanguinis SK355]
Length = 264
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 102/260 (39%), Gaps = 8/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P IY+ D PYG ++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRAYTWQLVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNTA ++ +E++ +P A T SG I ++ TP T+
Sbjct: 63 TK-DVKMIVIACNTATAVVWEEVKEKLDIPVLGVILPGASAAIKSTASGRIGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + + + ++ VE + + + + ++ R
Sbjct: 122 SSDIYRQKIEALSPEMQVESLACPKFVPLVESNELHSSLTKKVVYETLQPLVG-----RV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHAL 250
D +VL CTHYPL+ + + V +D+ R LL +++R +H
Sbjct: 177 DTLVLGCTHYPLLRPIIQNRMGPNVKLIDSGAECVRDISVLLNYFEINRSREKQELNHQF 236
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
+ + GLK
Sbjct: 237 YTTANAKSFSEIAESWLGLK 256
>gi|148546010|ref|YP_001266112.1| glutamate racemase [Pseudomonas putida F1]
gi|166231050|sp|A5VYG8|MURI_PSEP1 RecName: Full=Glutamate racemase
gi|148510068|gb|ABQ76928.1| glutamate racemase [Pseudomonas putida F1]
Length = 265
Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats.
Identities = 63/251 (25%), Positives = 113/251 (45%), Gaps = 5/251 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ + DSG+GGL VL +++ L+P +YVAD PYG +++R +
Sbjct: 5 SAPVGVMDSGVGGLSVLAEIQRLLPNETLLYVADCGHIPYGEKSPDYIRERCRHIAEFF- 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA +LR +P+ +G PA+K AAA T+SG++ +L+T TL
Sbjct: 64 HEQGAKAMVLACNTATVAAVADLRELYPTWPLVGMEPAVKPAAAATRSGVVGVLATTGTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + + + L +E + +++ ++G
Sbjct: 124 QSAKFAALLDRFANDVQVITQPCPGLVELIET----GDLASPALRQMLQGYVQPLLAAGC 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP + + + P V +D ++AR+ R LL + +
Sbjct: 180 DTLILGCTHYPFLRPLLAGMVPNDVAIIDTGAAVARQLRRLLGANDLLAKGPAGAARFWT 239
Query: 253 SGKPDIAMRRL 263
S P+ + L
Sbjct: 240 SADPEALRKIL 250
>gi|289434486|ref|YP_003464358.1| hypothetical protein lse_1119 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289170730|emb|CBH27270.1| murI [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|313633648|gb|EFS00406.1| glutamate racemase [Listeria seeligeri FSL N1-067]
gi|313638209|gb|EFS03457.1| glutamate racemase [Listeria seeligeri FSL S4-171]
Length = 266
Score = 250 bits (639), Expect = 2e-64, Method: Composition-based stats.
Identities = 52/257 (20%), Positives = 96/257 (37%), Gaps = 6/257 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I DSG+GGL V++++ +P Y+ D PYG + +++ ++
Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVRQFTWE-MTNF 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + VIACNTA ++R+ P + A T++ I +L T T
Sbjct: 60 LVDRGIKMLVIACNTATAAALYDIRAKLDIPVIGVIQPGSRAALKATRNNKIGVLGTIGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + + ++ S VE KK + + + +
Sbjct: 120 VESMAYPTALKGLNRRVEVDSLACPKFVSVVESGEYK----SAIAKKVVAESLLPLKSTK 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHAL 250
D ++L CTHYPL+ + V +++ + A LL N + H
Sbjct: 176 IDTVILGCTHYPLLKPIIENFMGDDVAVINSGEETASEVSALLDYHNLLDASDKEIQHRF 235
Query: 251 FLSGKPDIAMRRLMQGF 267
F +G I
Sbjct: 236 FTTGSTQIFQDIAKDWL 252
>gi|327462020|gb|EGF08349.1| glutamate racemase [Streptococcus sanguinis SK1057]
Length = 264
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 103/260 (39%), Gaps = 8/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P IY+ D PYG ++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRAYTWQLVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNTA ++ +E++ +P A T SG I ++ TP T+
Sbjct: 63 TK-DVKMIVIACNTATAVVWEEVKEKLDIPVLGVILPGASAAIKSTASGRIGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + + + ++ VE + + + + ++ R
Sbjct: 122 SSDIYRQKIEALSPEMQVDSLACPKFVPLVESNELHSSLTKKVVYETLQP-----LAGRV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHAL 250
D +VL CTHYPL+ + + V +D+ R LL +++R +H
Sbjct: 177 DTLVLGCTHYPLLRPIIQNRMGPNVKLIDSGAECVRDISVLLNYFEINRSREKQEINHQF 236
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
+ + + GLK
Sbjct: 237 YTTANANSFSEIAESWLGLK 256
>gi|78221768|ref|YP_383515.1| glutamate racemase [Geobacter metallireducens GS-15]
gi|123572676|sp|Q39Y84|MURI_GEOMG RecName: Full=Glutamate racemase
gi|78193023|gb|ABB30790.1| glutamate racemase [Geobacter metallireducens GS-15]
Length = 276
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 64/256 (25%), Positives = 107/256 (41%), Gaps = 6/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I IFDSG+GGL VL+++ +P+ IY D PYG + + + + S L
Sbjct: 10 KAIGIFDSGVGGLTVLKEIIKALPQEDTIYFGDTARVPYGTKSPETVTRYSLEIAS-FLV 68
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
L V+ACNTA + L+ T P ++AAA T+SG + ++ T T+R
Sbjct: 69 HRDIKLLVVACNTASACALEALQQTLSIPVVGVIEPGARRAAAVTRSGRVGVIGTEGTIR 128
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + I + + + + EE ++ + D
Sbjct: 129 SSAYAKAIKRINPEVEVVTRACPLFVPLAEEGWTDNEVAHLTART----YLSGLREAGVD 184
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALFL 252
+VL CTHYPL+ V + V +D+++ AR +L + T +H F+
Sbjct: 185 TLVLGCTHYPLLKRVIGETIGEEVKLVDSAEETARIVAEILRGGELLRPTSEQGNHHYFV 244
Query: 253 SGKPDIAMRRLMQGFG 268
S P +R + G
Sbjct: 245 SDVPAGFIRVGNRFLG 260
>gi|293554039|ref|ZP_06674639.1| glutamate racemase [Enterococcus faecium E1039]
gi|291601821|gb|EFF32073.1| glutamate racemase [Enterococcus faecium E1039]
Length = 277
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 53/259 (20%), Positives = 98/259 (37%), Gaps = 7/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V+++ +P + ++V D PYG + + +D L
Sbjct: 11 NRPIGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQVIQYTWE-MTDYL 69
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA + +E+++ +P + A TQ+ + I+ T T+
Sbjct: 70 VDQGIKMLVIACNTATAVALEEIKAALSIPVIGVILPGTRAAVKKTQNKQVGIIGTIGTV 129
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + V + + ++ S VE + KK + K+
Sbjct: 130 KSRAYEKALKEKVPELTVTSLACPKFVSVVESNEYHSSV----AKKIVAETLAPLTTKKI 185
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--AL 250
D ++L CTHYPL+ + + + V +D+ LL N +
Sbjct: 186 DTLILGCTHYPLLRPIIQNVVGENVQLIDSGAETVGEVSMLLDYFNLSNSPQNGRTLCQF 245
Query: 251 FLSGKPDIAMRRLMQGFGL 269
+ +G + G+
Sbjct: 246 YTTGSAKLFEEIAEDWLGI 264
>gi|327490090|gb|EGF21878.1| glutamate racemase [Streptococcus sanguinis SK1058]
gi|332367402|gb|EGJ45135.1| glutamate racemase [Streptococcus sanguinis SK1059]
Length = 264
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 102/260 (39%), Gaps = 8/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P IY+ D PYG ++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRAYTWQLVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNTA ++ +E++ +P A T SG I ++ TP T+
Sbjct: 63 TK-DVKMIVIACNTATAVVWEEVKEKLDIPVLGVILPGASAAIKSTVSGRIGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + + + ++ VE + + + + ++ R
Sbjct: 122 SSDIYRQKIEALSPEMQVESLACPKFVPLVESNELHSSLTKKVVYETLQP-----LAGRV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHAL 250
D +VL CTHYPL+ + + V +D+ R LL +++R +H
Sbjct: 177 DTLVLGCTHYPLLRPIIQNRMGPDVKLIDSGAECVRDISVLLNYFEINRSREKQELNHQF 236
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
+ + GLK
Sbjct: 237 YTTANAKSFSEIAESWLGLK 256
>gi|167031792|ref|YP_001667023.1| glutamate racemase [Pseudomonas putida GB-1]
gi|189030364|sp|B0KNE7|MURI_PSEPG RecName: Full=Glutamate racemase
gi|166858280|gb|ABY96687.1| glutamate racemase [Pseudomonas putida GB-1]
Length = 265
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 64/251 (25%), Positives = 114/251 (45%), Gaps = 5/251 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ + DSG+GGL VL +++ L+P +YVAD PYG +++R +
Sbjct: 5 SAPVGVMDSGVGGLSVLAEIQRLLPNETLLYVADCGHVPYGEKSPDYIRQRCRHIAGFF- 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA +LR +P+ +G PA+K AAA T+SG++ +L+T TL
Sbjct: 64 HEQGAKAMVLACNTATVAAVADLRELYPTWPLVGMEPAVKPAAAATRSGVVGVLATTGTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + + + L +E + +++ + G
Sbjct: 124 QSAKFAALLDRFANDVQVITQPCPGLVELIET----GDLTSPVLRQMLWGYVQPLLAAGC 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP + + + P V +D ++AR+ + LL + D +
Sbjct: 180 DTLILGCTHYPFLRPLLAGMVPADVAVIDTGAAVARQLQRLLGANDLLAEGPAGDARFWT 239
Query: 253 SGKPDIAMRRL 263
S P+I + L
Sbjct: 240 SADPEILRKIL 250
>gi|256369619|ref|YP_003107129.1| glutamate racemase [Brucella microti CCM 4915]
gi|255999781|gb|ACU48180.1| glutamate racemase [Brucella microti CCM 4915]
Length = 277
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 141/272 (51%), Positives = 195/272 (71%), Gaps = 3/272 (1%)
Query: 2 KIDNYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHA 59
++P + + + IL+FDSGIGGL VL++ R +MP+ F+Y+ADD GFPYGNWE+ A
Sbjct: 5 PAGSFPAKPTIAPERPILVFDSGIGGLTVLREARVVMPDRRFVYIADDAGFPYGNWEEEA 64
Query: 60 LKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119
LK+R++ LF + + Y P ++VIACNTA TL+ ++LR +PS+ F+G VPAIK AA T
Sbjct: 65 LKRRIIELFGEFIANYDPEIAVIACNTASTLVLEDLRRAYPSVPFVGTVPAIKPAAERTS 124
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
SGL+S+L+TP T++R YT +LI S+ S+CH+ LV + LA E + G E + +
Sbjct: 125 SGLVSVLATPGTVKRAYTRDLIQSFASRCHVRLVGADGLAVIAEAHIRGESFDEALVMAQ 184
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RIN 238
I CFIEK+GKRTD++VLACTHYP +V+V R+L+PWPVDWLD +++IARR + LLP R +
Sbjct: 185 IAPCFIEKDGKRTDIVVLACTHYPFLVNVLRRLAPWPVDWLDPAEAIARRMKSLLPARSD 244
Query: 239 THQTRVFDDHALFLSGKPDIAMRRLMQGFGLK 270
+ DD A F S KPD A+RRLMQGFGL+
Sbjct: 245 DDEFHSQDDLAFFTSRKPDYAIRRLMQGFGLR 276
>gi|297618209|ref|YP_003703368.1| glutamate racemase [Syntrophothermus lipocalidus DSM 12680]
gi|297146046|gb|ADI02803.1| glutamate racemase [Syntrophothermus lipocalidus DSM 12680]
Length = 273
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 58/256 (22%), Positives = 105/256 (41%), Gaps = 6/256 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ + +FDSG+GGL V++++ +P + IY+ D PYG L + +
Sbjct: 1 MERAQPVGVFDSGVGGLTVVKEIIKRLPCENIIYIGDTANVPYGGKPPQELIRLGKNIID 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L V ACNT+ ++ LR P VP AAA T++G + +++T
Sbjct: 61 -FLINQGAKAVVAACNTSSSVSIPILRDMCPVPVIDVIVPGAANAAAVTRNGRVGVIATE 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT++ + I + ++ V+ VE+ DE+++
Sbjct: 120 ATVKTGAYTRHIKALSPGISVYEVACPRFVPLVEQGVLEG----DEVEEVANEYLQPLRR 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDH 248
+ D +V+ CTHYP ++ V +++ V +D ++ A R R L +
Sbjct: 176 QGIDTLVIGCTHYPFLIPVIQKVMGKGVRLVDPAEETASRLRATLLERGLDNPGTTSPQY 235
Query: 249 ALFLSGKPDIAMRRLM 264
F +G + R
Sbjct: 236 RFFATGSSESFFRVGK 251
>gi|17987078|ref|NP_539712.1| glutamate racemase [Brucella melitensis bv. 1 str. 16M]
gi|23502072|ref|NP_698199.1| glutamate racemase [Brucella suis 1330]
gi|62290106|ref|YP_221899.1| glutamate racemase [Brucella abortus bv. 1 str. 9-941]
gi|82700029|ref|YP_414603.1| glutamate racemase [Brucella melitensis biovar Abortus 2308]
gi|161619150|ref|YP_001593037.1| glutamate racemase [Brucella canis ATCC 23365]
gi|189024344|ref|YP_001935112.1| glutamate racemase [Brucella abortus S19]
gi|225627664|ref|ZP_03785701.1| glutamate racemase [Brucella ceti str. Cudo]
gi|225852691|ref|YP_002732924.1| glutamate racemase [Brucella melitensis ATCC 23457]
gi|237815612|ref|ZP_04594609.1| glutamate racemase [Brucella abortus str. 2308 A]
gi|254689415|ref|ZP_05152669.1| glutamate racemase [Brucella abortus bv. 6 str. 870]
gi|254693900|ref|ZP_05155728.1| glutamate racemase [Brucella abortus bv. 3 str. Tulya]
gi|254697550|ref|ZP_05159378.1| glutamate racemase [Brucella abortus bv. 2 str. 86/8/59]
gi|254704480|ref|ZP_05166308.1| glutamate racemase [Brucella suis bv. 3 str. 686]
gi|254706624|ref|ZP_05168452.1| glutamate racemase [Brucella pinnipedialis M163/99/10]
gi|254710266|ref|ZP_05172077.1| glutamate racemase [Brucella pinnipedialis B2/94]
gi|254714263|ref|ZP_05176074.1| glutamate racemase [Brucella ceti M644/93/1]
gi|254717699|ref|ZP_05179510.1| glutamate racemase [Brucella ceti M13/05/1]
gi|254730444|ref|ZP_05189022.1| glutamate racemase [Brucella abortus bv. 4 str. 292]
gi|256031760|ref|ZP_05445374.1| glutamate racemase [Brucella pinnipedialis M292/94/1]
gi|256044845|ref|ZP_05447749.1| glutamate racemase [Brucella melitensis bv. 1 str. Rev.1]
gi|256061275|ref|ZP_05451425.1| glutamate racemase [Brucella neotomae 5K33]
gi|256113750|ref|ZP_05454554.1| glutamate racemase [Brucella melitensis bv. 3 str. Ether]
gi|256159930|ref|ZP_05457648.1| glutamate racemase [Brucella ceti M490/95/1]
gi|256255161|ref|ZP_05460697.1| glutamate racemase [Brucella ceti B1/94]
gi|256257661|ref|ZP_05463197.1| glutamate racemase [Brucella abortus bv. 9 str. C68]
gi|256263818|ref|ZP_05466350.1| glutamate racemase [Brucella melitensis bv. 2 str. 63/9]
gi|260168894|ref|ZP_05755705.1| glutamate racemase [Brucella sp. F5/99]
gi|260546655|ref|ZP_05822394.1| glutamate racemase [Brucella abortus NCTC 8038]
gi|260565553|ref|ZP_05836037.1| glutamate racemase [Brucella melitensis bv. 1 str. 16M]
gi|260566276|ref|ZP_05836746.1| glutamate racemase [Brucella suis bv. 4 str. 40]
gi|260754937|ref|ZP_05867285.1| glutamate racemase [Brucella abortus bv. 6 str. 870]
gi|260758153|ref|ZP_05870501.1| glutamate racemase [Brucella abortus bv. 4 str. 292]
gi|260761979|ref|ZP_05874322.1| glutamate racemase [Brucella abortus bv. 2 str. 86/8/59]
gi|260883947|ref|ZP_05895561.1| glutamate racemase [Brucella abortus bv. 9 str. C68]
gi|261214189|ref|ZP_05928470.1| glutamate racemase [Brucella abortus bv. 3 str. Tulya]
gi|261219542|ref|ZP_05933823.1| glutamate racemase [Brucella ceti M13/05/1]
gi|261222358|ref|ZP_05936639.1| glutamate racemase [Brucella ceti B1/94]
gi|261314084|ref|ZP_05953281.1| glutamate racemase [Brucella pinnipedialis M163/99/10]
gi|261317828|ref|ZP_05957025.1| glutamate racemase [Brucella pinnipedialis B2/94]
gi|261322037|ref|ZP_05961234.1| glutamate racemase [Brucella ceti M644/93/1]
gi|261325282|ref|ZP_05964479.1| glutamate racemase [Brucella neotomae 5K33]
gi|261755160|ref|ZP_05998869.1| glutamate racemase [Brucella suis bv. 3 str. 686]
gi|261758384|ref|ZP_06002093.1| glutamate racemase [Brucella sp. F5/99]
gi|265988858|ref|ZP_06101415.1| glutamate racemase [Brucella pinnipedialis M292/94/1]
gi|265991273|ref|ZP_06103830.1| glutamate racemase [Brucella melitensis bv. 1 str. Rev.1]
gi|265995109|ref|ZP_06107666.1| glutamate racemase [Brucella melitensis bv. 3 str. Ether]
gi|265998323|ref|ZP_06110880.1| glutamate racemase [Brucella ceti M490/95/1]
gi|294852530|ref|ZP_06793203.1| glutamate racemase [Brucella sp. NVSL 07-0026]
gi|297248502|ref|ZP_06932220.1| glutamate racemase [Brucella abortus bv. 5 str. B3196]
gi|54037864|sp|P63632|MURI_BRUSU RecName: Full=Glutamate racemase
gi|54041256|sp|P63631|MURI_BRUME RecName: Full=Glutamate racemase
gi|75496705|sp|Q57CU6|MURI_BRUAB RecName: Full=Glutamate racemase
gi|123547536|sp|Q2YRV4|MURI_BRUA2 RecName: Full=Glutamate racemase
gi|189082953|sp|A9M5L1|MURI_BRUC2 RecName: Full=Glutamate racemase
gi|229486232|sp|B2S641|MURI_BRUA1 RecName: Full=Glutamate racemase
gi|254766109|sp|C0RJG2|MURI_BRUMB RecName: Full=Glutamate racemase
gi|17982736|gb|AAL51976.1| glutamate racemase [Brucella melitensis bv. 1 str. 16M]
gi|23348029|gb|AAN30114.1| glutamate racemase [Brucella suis 1330]
gi|62196238|gb|AAX74538.1| MurI, glutamate racemase [Brucella abortus bv. 1 str. 9-941]
gi|82616130|emb|CAJ11173.1| Asp/Glu racemase [Brucella melitensis biovar Abortus 2308]
gi|161335961|gb|ABX62266.1| glutamate racemase [Brucella canis ATCC 23365]
gi|189019916|gb|ACD72638.1| Asp/Glu racemase [Brucella abortus S19]
gi|225617669|gb|EEH14714.1| glutamate racemase [Brucella ceti str. Cudo]
gi|225641056|gb|ACO00970.1| glutamate racemase [Brucella melitensis ATCC 23457]
gi|237788910|gb|EEP63121.1| glutamate racemase [Brucella abortus str. 2308 A]
gi|260095705|gb|EEW79582.1| glutamate racemase [Brucella abortus NCTC 8038]
gi|260151621|gb|EEW86715.1| glutamate racemase [Brucella melitensis bv. 1 str. 16M]
gi|260155794|gb|EEW90874.1| glutamate racemase [Brucella suis bv. 4 str. 40]
gi|260668471|gb|EEX55411.1| glutamate racemase [Brucella abortus bv. 4 str. 292]
gi|260672411|gb|EEX59232.1| glutamate racemase [Brucella abortus bv. 2 str. 86/8/59]
gi|260675045|gb|EEX61866.1| glutamate racemase [Brucella abortus bv. 6 str. 870]
gi|260873475|gb|EEX80544.1| glutamate racemase [Brucella abortus bv. 9 str. C68]
gi|260915796|gb|EEX82657.1| glutamate racemase [Brucella abortus bv. 3 str. Tulya]
gi|260920942|gb|EEX87595.1| glutamate racemase [Brucella ceti B1/94]
gi|260924631|gb|EEX91199.1| glutamate racemase [Brucella ceti M13/05/1]
gi|261294727|gb|EEX98223.1| glutamate racemase [Brucella ceti M644/93/1]
gi|261297051|gb|EEY00548.1| glutamate racemase [Brucella pinnipedialis B2/94]
gi|261301262|gb|EEY04759.1| glutamate racemase [Brucella neotomae 5K33]
gi|261303110|gb|EEY06607.1| glutamate racemase [Brucella pinnipedialis M163/99/10]
gi|261738368|gb|EEY26364.1| glutamate racemase [Brucella sp. F5/99]
gi|261744913|gb|EEY32839.1| glutamate racemase [Brucella suis bv. 3 str. 686]
gi|262552791|gb|EEZ08781.1| glutamate racemase [Brucella ceti M490/95/1]
gi|262766222|gb|EEZ12011.1| glutamate racemase [Brucella melitensis bv. 3 str. Ether]
gi|263002057|gb|EEZ14632.1| glutamate racemase [Brucella melitensis bv. 1 str. Rev.1]
gi|263093947|gb|EEZ17881.1| glutamate racemase [Brucella melitensis bv. 2 str. 63/9]
gi|264661055|gb|EEZ31316.1| glutamate racemase [Brucella pinnipedialis M292/94/1]
gi|294821119|gb|EFG38118.1| glutamate racemase [Brucella sp. NVSL 07-0026]
gi|297175671|gb|EFH35018.1| glutamate racemase [Brucella abortus bv. 5 str. B3196]
gi|326409213|gb|ADZ66278.1| Asp/Glu racemase [Brucella melitensis M28]
gi|326538922|gb|ADZ87137.1| glutamate racemase [Brucella melitensis M5-90]
Length = 277
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 141/272 (51%), Positives = 196/272 (72%), Gaps = 3/272 (1%)
Query: 2 KIDNYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHA 59
++P + + + IL+FDSGIGGL VL++ R +MP+ F+Y+ADD GFPYGNWE+ A
Sbjct: 5 PAGSFPAKPTIAPERPILVFDSGIGGLTVLREARVVMPDRRFVYIADDAGFPYGNWEEEA 64
Query: 60 LKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119
LK+R++ LF + + Y P ++VIACNTA TL+ ++LR +PS+ F+G VPAIK AA T
Sbjct: 65 LKRRIIELFGEFIANYDPEIAVIACNTASTLVLEDLRRAYPSVPFVGTVPAIKPAAERTS 124
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
SGL+S+L+TP T++R YT +LI S+ S+CH+ LV + LA+ E + G E + +
Sbjct: 125 SGLVSVLATPGTVKRAYTRDLIQSFASRCHVRLVGADGLAAIAEAHIRGESFDEALVMAQ 184
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RIN 238
I CFIEK+GKRTD++VLACTHYP +V+V R+L+PWPVDWLD +++IARR + LLP R +
Sbjct: 185 IAPCFIEKDGKRTDIVVLACTHYPFLVNVLRRLAPWPVDWLDPAEAIARRMKSLLPARSD 244
Query: 239 THQTRVFDDHALFLSGKPDIAMRRLMQGFGLK 270
+ DD A F S KPD A+RRLMQGFGL+
Sbjct: 245 DDEFHSQDDLAFFTSRKPDYAIRRLMQGFGLR 276
>gi|293572584|ref|ZP_06683558.1| glutamate racemase [Enterococcus faecium E980]
gi|291607367|gb|EFF36715.1| glutamate racemase [Enterococcus faecium E980]
Length = 270
Score = 250 bits (638), Expect = 2e-64, Method: Composition-based stats.
Identities = 52/262 (19%), Positives = 99/262 (37%), Gaps = 7/262 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I DSG+GGL V+++ +P + ++V D PYG + + +
Sbjct: 1 MTDNRPIGFIDSGVGGLTVVKEALKQLPNENILFVGDTARCPYGPRPAEQVIQYTWE-MT 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
D L + + VIACNTA + +E+++ +P + A TQ+ + I+ T
Sbjct: 60 DYLVEQGIKMLVIACNTATAVALEEIKAALSIPVIGVILPGTRAAVKKTQNKQVGIIGTI 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + V + + ++ S VE + KK +
Sbjct: 120 GTVKSQAYEKALKEKVPELTVTSLACPKFVSVVESNEYHSSV----AKKIVAETLAPLTT 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH- 248
K+ D ++L CTHYPL+ + + + V +D+ LL + +
Sbjct: 176 KKIDTLILGCTHYPLLRPIIQNVVGENVQLIDSGAETVGEVSMLLDYFHLSNSPQNGRTL 235
Query: 249 -ALFLSGKPDIAMRRLMQGFGL 269
+ +G + G+
Sbjct: 236 CQFYTTGSAKLFQEIAEDWLGI 257
>gi|325695051|gb|EGD36954.1| glutamate racemase [Streptococcus sanguinis SK150]
gi|325696351|gb|EGD38242.1| glutamate racemase [Streptococcus sanguinis SK160]
Length = 264
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 102/260 (39%), Gaps = 8/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P IY+ D PYG ++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRSYTWQLVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNTA ++ +E++ +P A T SG I ++ TP T+
Sbjct: 63 TK-DVKMIVIACNTATAVVWEEVKEKLDIPVLGVILPGASAAIKSTASGRIGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + + + ++ VE + + + + ++ R
Sbjct: 122 SSDIYRQKIEALSPEMKVESLACPKFVPLVESNELHSSLTKKVVYETLQP-----LAGRV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHAL 250
D +VL CTHYPL+ + + V +D+ R LL +++R +H
Sbjct: 177 DTLVLGCTHYPLLRPIIQNRMGPDVKLIDSGAECVRDISVLLNYFEINRSREKQELNHQF 236
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
+ + GLK
Sbjct: 237 YTTANAKSFSEIAESWLGLK 256
>gi|322390073|ref|ZP_08063608.1| glutamate racemase [Streptococcus parasanguinis ATCC 903]
gi|321143200|gb|EFX38643.1| glutamate racemase [Streptococcus parasanguinis ATCC 903]
Length = 264
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 50/257 (19%), Positives = 99/257 (38%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P +Y+ D PYG +++ + + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELLRQLPHEDVVYIGDSARAPYGPRPADQIREYTWQMVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + V+ACNTA ++ +E++ +P A T I ++ TP T+
Sbjct: 63 TK-NVKMIVLACNTATAVVWEEVKEKLDIPVLGVILPGASAAIKSTTHQKIGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I S + ++ VE + + + + ++ +
Sbjct: 122 SSGIYKEKIQSLAPDMEVSSLACPKFVPLVESNELASSVTKKVVYETLKPLVGK-----V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV--FDDHAL 250
D +VL CTHYPL+ + + + V +D+ R LL +++R H
Sbjct: 177 DTLVLGCTHYPLLKPIIQNVMGPDVKLIDSGAECVRDISVLLNYFELNKSRELLEQTHRF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
+ + + +
Sbjct: 237 YTTANANSFAAIAEKWL 253
>gi|312868338|ref|ZP_07728538.1| glutamate racemase [Streptococcus parasanguinis F0405]
gi|311096083|gb|EFQ54327.1| glutamate racemase [Streptococcus parasanguinis F0405]
Length = 264
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 50/257 (19%), Positives = 99/257 (38%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P +Y+ D PYG +++ + + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELLRQLPHEDVVYIGDSARAPYGPRPADQIREYTWQMVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + V+ACNTA ++ +E++ +P A T I ++ TP T+
Sbjct: 63 TK-NVKMIVLACNTATAVVWEEVKEKLDIPVLGVILPGASAAIKSTTHQKIGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I S + ++ VE + + + + ++ +
Sbjct: 122 SSGIYKEKIQSLAPDMEVSSLACPKFVPLVESNELASSVTKKVVYETLKPLVGK-----V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV--FDDHAL 250
D +VL CTHYPL+ + + + V +D+ R LL +++R H
Sbjct: 177 DTLVLGCTHYPLLKPIIQNVMGPDVKLIDSGAECVRDISVLLNYFELNKSRELLEQTHRF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
+ + + +
Sbjct: 237 YTTANANSFAAIAEKWL 253
>gi|296875970|ref|ZP_06900029.1| glutamate racemase [Streptococcus parasanguinis ATCC 15912]
gi|296433045|gb|EFH18833.1| glutamate racemase [Streptococcus parasanguinis ATCC 15912]
Length = 264
Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats.
Identities = 50/257 (19%), Positives = 99/257 (38%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P +Y+ D PYG +++ + + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELLRQLPHEDVVYIGDSARAPYGPRPADQIREYTWQMVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + V+ACNTA ++ +E++ +P A T I ++ TP T+
Sbjct: 63 TK-NVKMIVLACNTATAVVWEEVKEKLDIPVLGVILPGASAAIKSTTHQKIGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I S + ++ VE + + + + ++ +
Sbjct: 122 SSGIYKEKIQSLAPDMKVTSLACPKFVPLVESNELASSVTKKVVYETLKPLVGK-----V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV--FDDHAL 250
D +VL CTHYPL+ + + + V +D+ R LL +++R H
Sbjct: 177 DTLVLGCTHYPLLKPIIQNVMGPDVKLIDSGAECVRDISVLLNYFELNKSRELLEQTHRF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
+ + + +
Sbjct: 237 YTTANANSFAAIAEKWL 253
>gi|315648539|ref|ZP_07901638.1| glutamate racemase [Paenibacillus vortex V453]
gi|315276233|gb|EFU39579.1| glutamate racemase [Paenibacillus vortex V453]
Length = 268
Score = 249 bits (637), Expect = 3e-64, Method: Composition-based stats.
Identities = 57/258 (22%), Positives = 100/258 (38%), Gaps = 6/258 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+Q +I I DSG+GGL V +++ +P IY D PYG ++ +
Sbjct: 1 MQQAIAILDSGVGGLTVAKEVMRQLPREKIIYFGDTARAPYGPRTPEEVRLFTEQIVD-Y 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L +Y P + VIACNTA D + S P + A + T++G + ++ T T
Sbjct: 60 LIQYDPKMIVIACNTATAAALDYISSKVSVPVIGVIHPGARAAISATKTGNVGVIGTTGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + + + L VE + E + ++ +
Sbjct: 120 IGSGAYTAALKQLSPYVEVQSQACPKLVPLVEHGL----FRSKESLQVVQESLRGIKDTS 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHAL 250
D ++L CTHYP + + + + V + ++D AR +L + H
Sbjct: 176 IDCLILGCTHYPFLRNTIQTVMGPAVKLISSADETAREVSTILYDKGQLASSEESPVHQF 235
Query: 251 FLSGKPDIAMRRLMQGFG 268
F +G P I + G
Sbjct: 236 FCTGDPVIFQSIATEWLG 253
>gi|146319360|ref|YP_001199072.1| glutamate racemase [Streptococcus suis 05ZYH33]
gi|146321565|ref|YP_001201276.1| glutamate racemase [Streptococcus suis 98HAH33]
gi|253752389|ref|YP_003025530.1| glutamate racemase [Streptococcus suis SC84]
gi|253754215|ref|YP_003027356.1| glutamate racemase [Streptococcus suis P1/7]
gi|253756149|ref|YP_003029289.1| glutamate racemase [Streptococcus suis BM407]
gi|166231062|sp|A4W3D7|MURI_STRS2 RecName: Full=Glutamate racemase
gi|166231064|sp|A4VX33|MURI_STRSY RecName: Full=Glutamate racemase
gi|145690166|gb|ABP90672.1| Glutamate racemase [Streptococcus suis 05ZYH33]
gi|145692371|gb|ABP92876.1| Glutamate racemase [Streptococcus suis 98HAH33]
gi|251816678|emb|CAZ52319.1| glutamate racemase [Streptococcus suis SC84]
gi|251818613|emb|CAZ56447.1| glutamate racemase [Streptococcus suis BM407]
gi|251820461|emb|CAR47171.1| glutamate racemase [Streptococcus suis P1/7]
gi|292558992|gb|ADE31993.1| Glutamate racemase [Streptococcus suis GZ1]
Length = 264
Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats.
Identities = 56/259 (21%), Positives = 104/259 (40%), Gaps = 8/259 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V +++ +P +Y+ D PYG +++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVARELMRQLPHEEIVYIGDSARAPYGPRPAEQIREYTWQLVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + V ACNTA ++ +E++ +P A TQ+G + +L T T+
Sbjct: 63 TK-NVKMIVFACNTATAVVWEEVKEKLDIPVLGVILPGASAAIKATQTGKVGVLGTAMTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I + + + ++ A VE + + + + + + +
Sbjct: 122 QSDIYREKIQALSPETQVDSLACPKFAPLVESNSHQSSLAKKVVYETLRPLVG-----QV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HAL 250
D +VL CTHYPL+ + + V +D+ AR LL +++R D H
Sbjct: 177 DTLVLGCTHYPLLRPIIQNAMGKDVKLIDSGAECARDISVLLNYFQINRSRTEKDIQHRF 236
Query: 251 FLSGKPDIAMRRLMQGFGL 269
+ + P G+
Sbjct: 237 YTTASPAAFKEIAESWMGI 255
>gi|254719253|ref|ZP_05181064.1| glutamate racemase [Brucella sp. 83/13]
gi|265984252|ref|ZP_06096987.1| glutamate racemase [Brucella sp. 83/13]
gi|306838003|ref|ZP_07470861.1| glutamate racemase [Brucella sp. NF 2653]
gi|264662844|gb|EEZ33105.1| glutamate racemase [Brucella sp. 83/13]
gi|306406927|gb|EFM63148.1| glutamate racemase [Brucella sp. NF 2653]
Length = 277
Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats.
Identities = 141/272 (51%), Positives = 196/272 (72%), Gaps = 3/272 (1%)
Query: 2 KIDNYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHA 59
++P + + + IL+FDSGIGGL VL++ R +MP+ F+Y+ADD GFPYGNWE+ A
Sbjct: 5 PAGSFPAKPAIAPERPILVFDSGIGGLTVLREARVVMPDRRFVYIADDAGFPYGNWEEEA 64
Query: 60 LKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119
LK+R++ LF + + Y P ++VIACNTA TL+ ++LR +PS+ F+G VPAIK AA T
Sbjct: 65 LKRRIIELFGEFITNYDPEIAVIACNTASTLVLEDLRRAYPSVPFVGTVPAIKPAAERTS 124
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
SGL+S+L+TP T++R YT +LI S+ S+CH+ LV + LA+ E + G E + +
Sbjct: 125 SGLVSVLATPGTVKRAYTRDLIQSFASRCHVRLVGADGLAAIAEAHIRGESFDEALVMAQ 184
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RIN 238
I CFIEK+GKRTD++VLACTHYP +V+V R+L+PWPVDWLD +++IARR + LLP R +
Sbjct: 185 IAPCFIEKDGKRTDIVVLACTHYPFLVNVLRRLAPWPVDWLDPAEAIARRMKSLLPARSD 244
Query: 239 THQTRVFDDHALFLSGKPDIAMRRLMQGFGLK 270
+ DD A F S KPD A+RRLMQGFGL+
Sbjct: 245 DDEFHSQDDLAFFTSRKPDYAIRRLMQGFGLR 276
>gi|299535537|ref|ZP_07048858.1| glutamate racemase [Lysinibacillus fusiformis ZC1]
gi|298728737|gb|EFI69291.1| glutamate racemase [Lysinibacillus fusiformis ZC1]
Length = 265
Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats.
Identities = 52/257 (20%), Positives = 95/257 (36%), Gaps = 6/257 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG ++ +
Sbjct: 1 MNAPIGVIDSGVGGLTVAKEIMKRLPNETIYYIGDTARCPYGPRSRQEVRNFTWQ-MAKA 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+K + VIACNTA + + L+ P + A T+ + +L+T T
Sbjct: 60 LEKMNVKMLVIACNTATAVALESLQRNMPFPVLGVINAGARAAVKKTKRHEVVVLATEGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + S + HI ++ VE D I + ++
Sbjct: 120 IKSGAYEEALLSLNTSTHIIPLACPTFVPLVESGEYKG----DFANNLIAEGLKPLKNRQ 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHAL 250
D ++L CTHYP++ + V+ L +++ A+ + +L H
Sbjct: 176 FDTVILGCTHYPILQKQIEAVVGEDVNVLSSAEETAKDVQEMLAYNGTLANANAVPAHRF 235
Query: 251 FLSGKPDIAMRRLMQGF 267
F +G I
Sbjct: 236 FATGSVPIFRSIAENWL 252
>gi|150396728|ref|YP_001327195.1| glutamate racemase [Sinorhizobium medicae WSM419]
gi|166231055|sp|A6U9N0|MURI_SINMW RecName: Full=Glutamate racemase
gi|150028243|gb|ABR60360.1| glutamate racemase [Sinorhizobium medicae WSM419]
Length = 271
Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats.
Identities = 148/257 (57%), Positives = 192/257 (74%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
IL+FDSGIGGL VL++ R LMPE HFIYVADD GFPYG WE+ ALK+R++ LF +L
Sbjct: 7 KPILVFDSGIGGLTVLREARVLMPERHFIYVADDAGFPYGGWEEGALKERVIALFGRLLA 66
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++ P + +IACNTAFTL+ +LR +P M F+G VPAIK AA T+SGL+S+L+TP T++
Sbjct: 67 EHDPEICIIACNTAFTLVGADLRIVYPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 126
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI S+ SQCH+ LV S LA E Y G + +D ++ EI CF+E +GKRTD
Sbjct: 127 RAYTRDLIQSFASQCHVRLVGSENLARMAEAYIRGEALTDDAVRAEIAPCFVEVDGKRTD 186
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++VLACTHYP + +VFR+L+PWPVDWLD +++IARRAR L+P N + +D A+F S
Sbjct: 187 IVVLACTHYPFVANVFRRLAPWPVDWLDPAEAIARRARSLVPLPNGFEPLNGEDPAIFTS 246
Query: 254 GKPDIAMRRLMQGFGLK 270
GKPD A RRLMQGFGLK
Sbjct: 247 GKPDFATRRLMQGFGLK 263
>gi|218438768|ref|YP_002377097.1| glutamate racemase [Cyanothece sp. PCC 7424]
gi|226722981|sp|B7KCC4|MURI_CYAP7 RecName: Full=Glutamate racemase
gi|218171496|gb|ACK70229.1| glutamate racemase [Cyanothece sp. PCC 7424]
Length = 278
Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats.
Identities = 58/257 (22%), Positives = 101/257 (39%), Gaps = 7/257 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ I IFDSG+GGL VL+++ +P +Y AD PYG + + + + +
Sbjct: 6 RSPIGIFDSGVGGLTVLRELYRRLPNESILYFADTARLPYGTRSAGEILQFVREIMDWM- 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Q + ++ACNT+ L + +R F +P + A + I +++TPAT
Sbjct: 65 TSQQVKMVIMACNTSSALALEAIRDEFALPVLGVILPGARAAVQ--KGKRIGVIATPATA 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I S + V +E+ ++ E K+ +
Sbjct: 123 ASNAYRQAIEEIDSTAQVWQVGCPDFVPLIEQN----RLYEPYTKEVAKQYLNPLLQVNI 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +V CTHY + +FRQ+ P + +D + + A L + T +
Sbjct: 179 DTLVYGCTHYRHLEPLFRQILPPSISLVDPAQYVVSAAEKELELLGLKSTLPCLPTRFCV 238
Query: 253 SGKPDIAMRRLMQGFGL 269
SG P+ Q G
Sbjct: 239 SGNPETFANLSRQWLGY 255
>gi|152988174|ref|YP_001350643.1| glutamate racemase [Pseudomonas aeruginosa PA7]
gi|166231048|sp|A6VC58|MURI_PSEA7 RecName: Full=Glutamate racemase
gi|150963332|gb|ABR85357.1| glutamate racemase [Pseudomonas aeruginosa PA7]
Length = 265
Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats.
Identities = 67/256 (26%), Positives = 115/256 (44%), Gaps = 5/256 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +FDSG+GGL VL+++R +P +YVAD+ PYG +++R D L
Sbjct: 5 SAPVGVFDSGVGGLSVLREIRARLPAESLLYVADNAHVPYGEKSAEYIRER-CERIGDFL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA ELR +P + + PA+K AAA T++G + +L+T TL
Sbjct: 64 LERGAKALVLACNTATAAAAAELRERYPQVPLVAMEPAVKPAAAATRNGRVGVLATTGTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + S + L R+E + + +E +
Sbjct: 124 KSARFAALLDRFASDVQVFTQPCPGLVERIE----AGDLHGARTRALLERLLGPILEQGC 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP + + +L P + +D ++AR+ +L + +
Sbjct: 180 DTLILGCTHYPFVKPLLAELIPADIAVIDTGAAVARQLERVLSTRALLASGQAAAPRFWT 239
Query: 253 SGKPDIAMRRLMQGFG 268
S P+ R L +G
Sbjct: 240 SALPEEMERILPILWG 255
>gi|306840341|ref|ZP_07473112.1| glutamate racemase [Brucella sp. BO2]
gi|306844094|ref|ZP_07476688.1| glutamate racemase [Brucella sp. BO1]
gi|306275537|gb|EFM57269.1| glutamate racemase [Brucella sp. BO1]
gi|306289688|gb|EFM60880.1| glutamate racemase [Brucella sp. BO2]
Length = 277
Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats.
Identities = 141/272 (51%), Positives = 196/272 (72%), Gaps = 3/272 (1%)
Query: 2 KIDNYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHA 59
++P + + + IL+FDSGIGGL VL++ R +MP+ F+Y+ADD GFPYGNWE+ A
Sbjct: 5 PAGSFPAKPAIAPERPILVFDSGIGGLTVLREARVVMPDRRFVYIADDAGFPYGNWEEEA 64
Query: 60 LKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119
LK+R++ LF + + Y P ++VIACNTA TL+ ++LR +PS+ F+G VPAIK AA T
Sbjct: 65 LKRRIIELFGEFIANYDPEIAVIACNTASTLVLEDLRRAYPSVPFVGTVPAIKPAAERTS 124
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
SGL+S+L+TP T++R YT +LI S+ S+CH+ LV + LA+ E + G E + +
Sbjct: 125 SGLVSVLATPGTVKRAYTRDLIQSFASRCHVRLVGADGLAAIAEAHIRGESFDEALVMAQ 184
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RIN 238
I CFIEK+GKRTD++VLACTHYP +V+V R+L+PWPVDWLD +++IARR + LLP R +
Sbjct: 185 IAPCFIEKDGKRTDIVVLACTHYPFLVNVLRRLAPWPVDWLDPAEAIARRMKSLLPARSD 244
Query: 239 THQTRVFDDHALFLSGKPDIAMRRLMQGFGLK 270
+ DD A F S KPD A+RRLMQGFGL+
Sbjct: 245 DDEFHSQDDLAFFTSRKPDYAIRRLMQGFGLR 276
>gi|302024339|ref|ZP_07249550.1| glutamate racemase [Streptococcus suis 05HAS68]
gi|330833329|ref|YP_004402154.1| glutamate racemase [Streptococcus suis ST3]
gi|329307552|gb|AEB81968.1| glutamate racemase [Streptococcus suis ST3]
Length = 264
Score = 249 bits (635), Expect = 4e-64, Method: Composition-based stats.
Identities = 56/259 (21%), Positives = 103/259 (39%), Gaps = 8/259 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V +++ +P +Y+ D PYG +++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVARELMRQLPHEEIVYIGDSARAPYGPRPAEQIREYTWQLVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + V ACNTA + +E++ +P A TQ+G + +L T T+
Sbjct: 63 TK-NVKMIVFACNTATAVAWEEVKEKLDIPVLGVILPGASAAIKATQTGKVGVLGTAMTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I + + + ++ A VE + + + + + + +
Sbjct: 122 QSDIYRQKIQALSPETQVDSLACPKFAPLVESNSHQSSLAKKVVYETLRPLVGK-----V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HAL 250
D +VL CTHYPL+ + + V +D+ AR LL +++R D H
Sbjct: 177 DTLVLGCTHYPLLRPIIQNAMGKDVKLIDSGAECARDISVLLNYFQINRSRTEKDIQHRF 236
Query: 251 FLSGKPDIAMRRLMQGFGL 269
+ + P G+
Sbjct: 237 YTTASPAAFKEIAESWMGI 255
>gi|206889915|ref|YP_002249185.1| glutamate racemase [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206741853|gb|ACI20910.1| glutamate racemase [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 270
Score = 249 bits (635), Expect = 4e-64, Method: Composition-based stats.
Identities = 61/256 (23%), Positives = 109/256 (42%), Gaps = 7/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ + IFDSG+GGL VL+++ L+P IY+ D PYG + K + S L
Sbjct: 3 EKPVGIFDSGVGGLTVLKEIAKLLPNEELIYLGDTARVPYGIRSAETVIKYSIECAS-FL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + V+ACNT+ ++ + L+ P P ++ A T++G I I+ T AT+
Sbjct: 62 FKKGIKILVVACNTSSSVSLEVLKEKLPIAVIGVIEPGVRAALKATKNGKIGIIGTEATI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I S + + + + VEE I E + E E +
Sbjct: 122 QSGAYPKKIKSIEPEIEVISKACPLFVPLVEEGILEGSIAELIV----ERYLKELKNSGI 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALF 251
D ++L CTHYPL+ ++ + +D+++ I+R + +L + +
Sbjct: 178 DTLILGCTHYPLLKKTIQKYM-EGIQLVDSAEEISREVKEMLSYQGLINEKTNSGGKTFY 236
Query: 252 LSGKPDIAMRRLMQGF 267
++ PD +
Sbjct: 237 VTDSPDRFKKIGEIFL 252
>gi|126652650|ref|ZP_01724811.1| glutamate racemase [Bacillus sp. B14905]
gi|126590499|gb|EAZ84617.1| glutamate racemase [Bacillus sp. B14905]
Length = 265
Score = 249 bits (635), Expect = 4e-64, Method: Composition-based stats.
Identities = 52/257 (20%), Positives = 96/257 (37%), Gaps = 6/257 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG ++ +
Sbjct: 1 MNAPIGVIDSGVGGLTVAKEIMKRLPNETIYYIGDTARCPYGPRSRQEVRNFTWQ-MAKA 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+K + VIACNTA + + L+ P + A T+ + +L+T T
Sbjct: 60 LEKMNVKMLVIACNTATAVALESLQRNMPFPVLGVINAGARAAVKKTKRHEVVVLATEGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + S + HI ++ VE + K I + ++
Sbjct: 120 IKSGAYEEALLSLNTSTHIIPLACPTFVPLVESGEYKG----EFATKLIAEGLKPLKNQQ 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHAL 250
D ++L CTHYP++ + V+ L +++ A+ + +L H
Sbjct: 176 FDTVILGCTHYPILQKQIEAVVGDEVNVLSSAEETAKDVQEMLAYNGTLANANTVPAHKF 235
Query: 251 FLSGKPDIAMRRLMQGF 267
F +G I
Sbjct: 236 FATGSVPIFRSIAENWL 252
>gi|299822584|ref|ZP_07054470.1| glutamate racemase [Listeria grayi DSM 20601]
gi|299816113|gb|EFI83351.1| glutamate racemase [Listeria grayi DSM 20601]
Length = 270
Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats.
Identities = 54/260 (20%), Positives = 97/260 (37%), Gaps = 6/260 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I DSG+GGL V++++ +P Y+ D PYG + + K S
Sbjct: 1 MKQAIGFIDSGVGGLTVVKEVLKQLPHEQIYYLGDTARCPYGPRKPEEVLKFTRE-MSHF 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + VIACNTA ++R+ P + A +++ I++L T T
Sbjct: 60 LIDRGIKMLVIACNTATAAALVQIRAELDIPVIGVIQPGSRAALKESRNNKIAVLGTIGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + Q + ++ S VE KK + + +
Sbjct: 120 VKSEAYPKALKRLNHQVEVDSLACPKFVSVVESGEYK----SAIAKKVVAESLLPLKNTT 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHAL 250
D ++L CTHYPL+ + V +++ + A LL + H
Sbjct: 176 IDTVILGCTHYPLLKPIIENFLGADVAVINSGEETASEVSALLDYHGLLDSGGDTIKHRF 235
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
F +G I G++
Sbjct: 236 FTTGSTSIFKNLAEDWLGMQ 255
>gi|229588286|ref|YP_002870405.1| glutamate racemase [Pseudomonas fluorescens SBW25]
gi|229360152|emb|CAY47009.1| putative peptidoglycan biosynthesis protein [Pseudomonas
fluorescens SBW25]
Length = 264
Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats.
Identities = 65/243 (26%), Positives = 111/243 (45%), Gaps = 5/243 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL VL +++ L+P +YVAD PYG + +R + +
Sbjct: 4 DAPIGVFDSGVGGLTVLDEIQQLLPHESLLYVADCGHIPYGEKSPAFILERSRRVAAFFR 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA +LR FP +G PA+K AAA T+SG++ +L+T TL
Sbjct: 64 -EQGAKAFVIACNTATVAAVADLRLDFPDWPLVGMEPAVKPAAAATRSGVVGVLATTGTL 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + + + L +E + +++ ++
Sbjct: 123 QSAKFAALLDRFATDVKVVTQPCPGLVELIE----SGDLNSPALRQLLQRYIEPLLSAGC 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D I+L CTHYP + + Q+ P + +D ++AR+ + LL + + +
Sbjct: 179 DTIILGCTHYPFLKPLLAQMLPPSIILIDTGAAVARQLKRLLGERDLLAVGSPEPAQFWT 238
Query: 253 SGK 255
SG
Sbjct: 239 SGD 241
>gi|325978965|ref|YP_004288681.1| glutamate racemase [Streptococcus gallolyticus subsp. gallolyticus
ATCC BAA-2069]
gi|325178893|emb|CBZ48937.1| Glutamate racemase [Streptococcus gallolyticus subsp. gallolyticus
ATCC BAA-2069]
Length = 269
Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats.
Identities = 61/257 (23%), Positives = 103/257 (40%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P +Y+ D PYG +++ L + L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIREYTWELVN-FL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V ACNTA + +E++ +P A T++G I ++ TP T+
Sbjct: 62 LTQNVKMIVFACNTATAVAWEEVKEKLDIPVLGVILPGSSAAIKSTRNGKIGVIGTPMTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I S Q ++ +S A VE + KK + GK
Sbjct: 122 KSGIYHQKIKSLAPQMNVTSLSCPKFAPLVESNE----MTSSVAKKVVYETLAPLVGK-V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HAL 250
D +VL CTHYPL+ + + + V +D+ R LL +++R DD HA
Sbjct: 177 DTLVLGCTHYPLLRPIIQNVMGPNVKLIDSGAECIRDVSVLLNYFEINRSRTQDDVTHAF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
+ + +
Sbjct: 237 YTTASSQSFKEIAVNWL 253
>gi|319758794|gb|ADV70736.1| glutamate racemase [Streptococcus suis JS14]
Length = 264
Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats.
Identities = 54/259 (20%), Positives = 101/259 (38%), Gaps = 8/259 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V +++ +P +Y+ D PYG +++ + L
Sbjct: 3 NRPIGFLDSGVGGLTVARELMRQLPHEEIVYIGDSARAPYGPRPAEQIREYTWQ-VGNFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V ACNTA ++ +E++ +P A TQ+G + +L T T+
Sbjct: 62 LTKNVKMIVFACNTATAVVWEEVKEKLDIPVLGVILPGASAAIKATQTGKVGVLGTAMTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I + + + ++ A VE + + + + + + +
Sbjct: 122 QSDIYREKIQALSPETQVDSLACPKFAPLVESNSHQSSLAKKVVYETLRPLVG-----QV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HAL 250
D +VL CTHYPL+ + + V +D+ AR LL +++R D H
Sbjct: 177 DTLVLGCTHYPLLRPIIQNAMGKDVKLIDSGAECARDISVLLNYFQINRSRTEKDIQHRF 236
Query: 251 FLSGKPDIAMRRLMQGFGL 269
+ + P G+
Sbjct: 237 YTTASPAAFKEIAESWMGI 255
>gi|223934204|ref|ZP_03626140.1| glutamate racemase [Streptococcus suis 89/1591]
gi|223897120|gb|EEF63545.1| glutamate racemase [Streptococcus suis 89/1591]
Length = 264
Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats.
Identities = 56/259 (21%), Positives = 103/259 (39%), Gaps = 8/259 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V +++ +P +Y+ D PYG +++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVARELMRQLPHEEIVYIGDSARAPYGPRPAEQIREYTWQLVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + V ACNTA + +E++ +P A TQ+G + +L T T+
Sbjct: 63 TK-NVKMIVFACNTATAVAWEEVKEKLDIPVLGVILPGASAAIKATQTGKVGVLGTAMTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I + + + ++ A VE + + + + + + +
Sbjct: 122 QSDIYRQKIQALSPKTQVDSLACPKFAPLVESNSHQSSLAKKVVYETLRPLVGK-----V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HAL 250
D +VL CTHYPL+ + + V +D+ AR LL +++R D H
Sbjct: 177 DTLVLGCTHYPLLRPIIQNAMGKDVKLIDSGAECARDISVLLNYFQINRSRTEKDIQHRF 236
Query: 251 FLSGKPDIAMRRLMQGFGL 269
+ + P G+
Sbjct: 237 YTTASPAAFKEIAESWMGI 255
>gi|303238403|ref|ZP_07324938.1| glutamate racemase [Acetivibrio cellulolyticus CD2]
gi|302594107|gb|EFL63820.1| glutamate racemase [Acetivibrio cellulolyticus CD2]
Length = 268
Score = 248 bits (634), Expect = 6e-64, Method: Composition-based stats.
Identities = 57/249 (22%), Positives = 97/249 (38%), Gaps = 6/249 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSGIGGL VL+++ L+P+ +Y D PYG + K L
Sbjct: 3 NRPIGVFDSGIGGLTVLKEINRLLPQESVVYFGDSGRAPYGTKSKETVIKYTFQDI-RFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA D ++ +F P AA T++ + ++ TPAT+
Sbjct: 62 QNQDIKMIVIACNTASACSLDRVKHSFDFPIVEVVQPGSAAAAKETRNNRVGVIGTPATI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I S I + VE + + K E + +
Sbjct: 122 SSGVYEKAITRINSSIEIFSKPCPMFVPLVE----EGWWENEIAFKIAEEYLLPLKELDI 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHALF 251
D +VL CTHYPL+ + +++ V ++++ +A+ + + N + +
Sbjct: 178 DTLVLGCTHYPLLQNTIQKVMGDDVKLVNSALEVAKVVKEGIEENNNGRDEKVSPVCRFY 237
Query: 252 LSGKPDIAM 260
S +
Sbjct: 238 TSDSVEKFE 246
>gi|262283242|ref|ZP_06061009.1| glutamate racemase [Streptococcus sp. 2_1_36FAA]
gi|262261494|gb|EEY80193.1| glutamate racemase [Streptococcus sp. 2_1_36FAA]
Length = 264
Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats.
Identities = 56/260 (21%), Positives = 100/260 (38%), Gaps = 8/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P IY+ D PYG ++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRDYTWQLVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNTA ++ +E++ +P A T SG I ++ TP T+
Sbjct: 63 TK-DVKMIVIACNTATAVVWEEIKEKLDIPVLGVILPGASAAIKSTHSGKIGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + + + ++ VE + + + + + +
Sbjct: 122 TSDIYRKKIEALSPEMEVSSLACPKFVPLVESNELTSSVTKKVVYETLLP-----LAGKV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HAL 250
D +VL CTHYPL+ + + + V +D+ R LL +++R H
Sbjct: 177 DTLVLGCTHYPLLRSIIQNVMGPDVKLIDSGAECVRDISVLLNYFEINRSREEQTLQHRF 236
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
+ + G K
Sbjct: 237 YTTASAKSFAEIAEHWLGQK 256
>gi|148560126|ref|YP_001259114.1| glutamate racemase [Brucella ovis ATCC 25840]
gi|166231028|sp|A5VQW7|MURI_BRUO2 RecName: Full=Glutamate racemase
gi|148371383|gb|ABQ61362.1| glutamate racemase [Brucella ovis ATCC 25840]
Length = 277
Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats.
Identities = 141/272 (51%), Positives = 194/272 (71%), Gaps = 3/272 (1%)
Query: 2 KIDNYPCEKKL--QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHA 59
++P + + + IL+FDSGIGGL VL++ R +MP+ F+Y+ADD GFPYGNWE+ A
Sbjct: 5 PAGSFPAKPTIAPERPILVFDSGIGGLTVLREARVVMPDRRFVYIADDAGFPYGNWEEEA 64
Query: 60 LKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119
LK+R++ LF + + Y P ++VIACNTA TL+ ++LR +PS+ F+G VPAIK AA T
Sbjct: 65 LKRRIIELFGEFIANYDPEIAVIACNTASTLVLEDLRRAYPSVPFVGTVPAIKPAAERTS 124
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
SGL+S+L+TP T++R YT +LI S+ S+CH+ LV LA+ E + G E + +
Sbjct: 125 SGLVSVLATPGTVKRAYTRDLIQSFASRCHVRLVGVDGLAAIAEAHIRGESFDEALVMAQ 184
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RIN 238
I CFIEK GKRTD++VLACTHYP +V+V R+L+PWPVDWLD +++IARR + LLP R +
Sbjct: 185 IAPCFIEKGGKRTDIVVLACTHYPFLVNVLRRLAPWPVDWLDPAEAIARRMKSLLPARSD 244
Query: 239 THQTRVFDDHALFLSGKPDIAMRRLMQGFGLK 270
+ DD A F S KPD A+RRLMQGFGL+
Sbjct: 245 DDEFHSQDDLAFFTSRKPDYAIRRLMQGFGLR 276
>gi|77920315|ref|YP_358130.1| glutamate racemase [Pelobacter carbinolicus DSM 2380]
gi|77546398|gb|ABA89960.1| glutamate racemase [Pelobacter carbinolicus DSM 2380]
Length = 266
Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats.
Identities = 57/257 (22%), Positives = 110/257 (42%), Gaps = 6/257 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+I +FDSG+GGL VL++++ L+P +Y+ D PYG +++ + S L
Sbjct: 3 DRAIGVFDSGVGGLTVLKEIQRLLPGEEVLYLGDTARVPYGTKSPATVRRYALEAAS-FL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + + V+ACNTA ++ +L + F P ++A + T++G I ++ T T+
Sbjct: 62 TRRRVKMLVVACNTASSVALGDLENRFKLPVIGVIEPGARRAVSVTRTGRIGVIGTEGTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + I + + + VE + + E
Sbjct: 122 KSGAYTLAIKQLAPDADVVALHCPLFVPLVE----EGWLDHPVTRLAAEEYLGSLRHHGI 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALF 251
D +VL CTHYPL+ V +Q+ V +D+++ A L +++ + F
Sbjct: 178 DTLVLGCTHYPLLKPVLQQVLGPQVMLIDSAEETAIAVADRLQQLSHVRPLGEAIPPQFF 237
Query: 252 LSGKPDIAMRRLMQGFG 268
++ P+ R + G
Sbjct: 238 VTDVPERFQRVGGEFLG 254
>gi|259047138|ref|ZP_05737539.1| glutamate racemase [Granulicatella adiacens ATCC 49175]
gi|259036188|gb|EEW37443.1| glutamate racemase [Granulicatella adiacens ATCC 49175]
Length = 482
Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats.
Identities = 53/259 (20%), Positives = 97/259 (37%), Gaps = 8/259 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I DSG+GGL VL++ +P +++ D PYG +++ + +
Sbjct: 1 MKRPIGFIDSGVGGLTVLKEALKQLPNESMVFLGDSARCPYGTRPKEEIRQYTLEMV-QF 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + + VIACNTA ++ +EL+ T P A T + I +L T AT
Sbjct: 60 LLQKNIKMLVIACNTATAVVLEELKQTLEIPVVGVIQPGSLAAIKQTSNDRIGVLGTNAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ +H + ++ VE + E + ++ EG
Sbjct: 120 ISSKVYPKTMHDKNKNIQVFDIACPNFVPLVE----NNQSDTPEAWEIVKETLNPLEGTN 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT---HQTRVFDDH 248
D ++L CTHYPL+ +++ V +D+ LL +T
Sbjct: 176 VDTVILGCTHYPLLRKTIQKVVGNQVSLIDSGAETVSSVSALLDYCKLSETPETNPNPTL 235
Query: 249 ALFLSGKPDIAMRRLMQGF 267
++ +G +
Sbjct: 236 EIYTTGDATLFEEIAENWL 254
>gi|297539329|ref|YP_003675098.1| glutamate racemase [Methylotenera sp. 301]
gi|297258676|gb|ADI30521.1| glutamate racemase [Methylotenera sp. 301]
Length = 283
Score = 248 bits (633), Expect = 7e-64, Method: Composition-based stats.
Identities = 73/276 (26%), Positives = 124/276 (44%), Gaps = 14/276 (5%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
+K + P K ++ I +FDSG+GG+ VL+ ++ L+P +YVAD PYGN +
Sbjct: 6 IKSNETPVNKPIEKPIAVFDSGVGGISVLKHIQALLPNEQLLYVADSKYAPYGNKTAAEI 65
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+ R + L V+ACNTA D LR + S+ +G PA+K AA +++
Sbjct: 66 QARCFEIAE-FLMAKDAKALVVACNTATAAAIDSLRERY-SLPIIGMEPAVKPAAEASRN 123
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G+I +L+T TL+ + L+ SY + + + L +E + D K I
Sbjct: 124 GIIGVLATTGTLKSAQFAGLLESYGRNVKVVTQACVGLVECIERGE----LDADNTKMLI 179
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ + D IVL CTHYP + H+ Q+ V +D ++A++ + L
Sbjct: 180 QQYCAPLLAEGADTIVLGCTHYPFVRHLIEQVVGANVALIDTGAAVAKQLKRQLEEKGLL 239
Query: 241 QTRVFD--------DHALFLSGKPDIAMRRLMQGFG 268
R + + + + A + Q +G
Sbjct: 240 SNRTAEADAQFSKSKVQFWTNSENPNAKVVIEQLWG 275
>gi|217964697|ref|YP_002350375.1| glutamate racemase [Listeria monocytogenes HCC23]
gi|254766118|sp|B8DHZ5|MURI_LISMH RecName: Full=Glutamate racemase
gi|217333967|gb|ACK39761.1| glutamate racemase [Listeria monocytogenes HCC23]
gi|307570742|emb|CAR83921.1| racE [Listeria monocytogenes L99]
Length = 266
Score = 248 bits (633), Expect = 7e-64, Method: Composition-based stats.
Identities = 53/257 (20%), Positives = 96/257 (37%), Gaps = 6/257 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I DSG+GGL V++++ +P Y+ D PYG + + K ++
Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWE-MTNF 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + VIACNTA ++R P + A T++ I +L T T
Sbjct: 60 LVDRGIKMLVIACNTATAAALYDIREKLDIPVIGVIQPGSRAALKATRNNKIGVLGTLGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + + ++ S VE KK + + + +
Sbjct: 120 VESMAYPTALKGLNRRVEVDSLACPKFVSVVESGEYK----SAIAKKVVAESLLPLKSTK 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHAL 250
D ++L CTHYPL+ + V +++ + A LL N + + +H
Sbjct: 176 IDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDSTDEEIEHRF 235
Query: 251 FLSGKPDIAMRRLMQGF 267
F +G I
Sbjct: 236 FTTGSTQIFKDIAKDWL 252
>gi|157151279|ref|YP_001450953.1| glutamate racemase [Streptococcus gordonii str. Challis substr.
CH1]
gi|189030375|sp|A8AYU3|MURI_STRGC RecName: Full=Glutamate racemase
gi|157076073|gb|ABV10756.1| glutamate racemase [Streptococcus gordonii str. Challis substr.
CH1]
Length = 264
Score = 248 bits (633), Expect = 7e-64, Method: Composition-based stats.
Identities = 56/260 (21%), Positives = 100/260 (38%), Gaps = 8/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P IY+ D PYG ++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRDYTWQLVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNTA ++ +E++ +P A T SG I ++ TP T+
Sbjct: 63 TK-DVKMIVIACNTATAVVWEEIKEKLDIPVLGVILPGASAAIKSTHSGKIGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + + + ++ VE + + + + + +
Sbjct: 122 TSDIYRKKIEALSPEMEVSSLACPKFVPLVESNELTSSVTKKVVYETLLP-----LAGKV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HAL 250
D +VL CTHYPL+ + + + V +D+ R LL +++R H
Sbjct: 177 DTLVLGCTHYPLLRSIIQNVMGPDVKLIDSGAECVRDISVLLNYFEINRSREEQTLRHRF 236
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
+ + G K
Sbjct: 237 YTTASAKSFAEIAEHWLGQK 256
>gi|197116675|ref|YP_002137102.1| glutamate racemase [Geobacter bemidjiensis Bem]
gi|197086035|gb|ACH37306.1| glutamate racemase [Geobacter bemidjiensis Bem]
Length = 278
Score = 248 bits (633), Expect = 7e-64, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 106/256 (41%), Gaps = 6/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I IFDSG+GGL VL+++ +P+ IY+ D PYG + + + + L
Sbjct: 4 KAIGIFDSGVGGLTVLKEVVRALPQEDTIYLGDTARVPYGTKSPETVVRYSRQI-TRYLL 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ V+ACNTA + L+ F P + AAA T+SG + ++ T AT+
Sbjct: 63 SRDIKVLVVACNTASAVALSALQQEFSIPIVGVIEPGARAAAAVTKSGKVGVIGTTATVA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + I + + + + E + + + + + D
Sbjct: 123 SSAYTKAIKRINPEIEVVSRACPLFVPLAE----EGWVDNEVARLTAGIYLEDLKKHGVD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALFL 252
+VL CTHYP++ V ++ V +D ++ A +L + + +H ++
Sbjct: 179 TLVLGCTHYPILRKVIAEVMGPEVTLVDAAEQTALTVAGILAEQGLLRPKGERGNHHYYV 238
Query: 253 SGKPDIAMRRLMQGFG 268
+ P +R + G
Sbjct: 239 TDIPAGFIRIGNRFLG 254
>gi|304403816|ref|ZP_07385478.1| glutamate racemase [Paenibacillus curdlanolyticus YK9]
gi|304346794|gb|EFM12626.1| glutamate racemase [Paenibacillus curdlanolyticus YK9]
Length = 269
Score = 248 bits (633), Expect = 7e-64, Method: Composition-based stats.
Identities = 56/258 (21%), Positives = 99/258 (38%), Gaps = 6/258 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+Q I I DSG+GGL V +++ +P +Y D PYG + + +
Sbjct: 1 MQQPIAILDSGVGGLTVAKEVMRQLPREKIVYFGDTARTPYGPRPAGEVVRFTKEIVD-Y 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L +Y P + V+ACNTA D+L+ P + A + T +G+I ++ T T
Sbjct: 60 LIQYNPKMIVVACNTATAFALDDLKEMVSVPVVGVIDPGARAALSRTNTGVIGVIGTEGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R + + H+ + VE+ + E ++
Sbjct: 120 VRSGAYEHALKQLSPHIHVISQACPAFVPLVEQ----GNFRSTETFHTVQQALGYLREYP 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHAL 250
D ++L CTHYP + ++ V + +++ R R +L H
Sbjct: 176 LDCMILGCTHYPFLSESISEVMGPEVALISSAEETVREIRAILEGQGKLVSIEAEPMHRF 235
Query: 251 FLSGKPDIAMRRLMQGFG 268
F SG+ + + Q G
Sbjct: 236 FCSGEQQMFKQIATQWLG 253
>gi|322417854|ref|YP_004197077.1| glutamate racemase [Geobacter sp. M18]
gi|320124241|gb|ADW11801.1| glutamate racemase [Geobacter sp. M18]
Length = 279
Score = 248 bits (633), Expect = 7e-64, Method: Composition-based stats.
Identities = 59/256 (23%), Positives = 105/256 (41%), Gaps = 6/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I IFDSG+GGL VL+++ +P+ IY+ D PYG + + + L
Sbjct: 4 KAIGIFDSGVGGLTVLKEVVQALPQEDTIYLGDTARVPYGTKSPETVIRYSRQIA-RYLL 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
L V+ACNTA + L+ F P + AAA T++G + ++ T AT+
Sbjct: 63 NRDIKLLVVACNTASAVALSALQQEFDIPIVGVIEPGARAAAAATRTGRVGVIGTAATVA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + I + + + E + D + + + + D
Sbjct: 123 SSAYTKAIKRINPDIEVVNRACPLFVPLAE----EGWVDNDVARMTARLYLEDLKQQGVD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALFL 252
+VL CTHYP++ V Q+ V +D++ AR +L + +H ++
Sbjct: 179 TLVLGCTHYPILKEVIAQVMGPEVTLVDSAAETARTVARILSEQGLLRPVNERGNHHYYV 238
Query: 253 SGKPDIAMRRLMQGFG 268
+ P +R + G
Sbjct: 239 TDIPAGFIRVGNRFLG 254
>gi|320159866|ref|YP_004173090.1| glutamate racemase [Anaerolinea thermophila UNI-1]
gi|319993719|dbj|BAJ62490.1| glutamate racemase [Anaerolinea thermophila UNI-1]
Length = 273
Score = 248 bits (633), Expect = 8e-64, Method: Composition-based stats.
Identities = 71/254 (27%), Positives = 121/254 (47%), Gaps = 6/254 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ +R LMP IY+AD PYG ++ + L
Sbjct: 2 IGVFDSGVGGLSVLRAIRALMPAEPVIYLADQAHVPYGPRPLEEVRGFS-QSIARFLIAQ 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA LR TFP F+G PA+K AA TQSG++ +L+TPAT +
Sbjct: 61 GARVIVVACNTASAAALFHLRQTFPETPFVGMEPAVKPAAETTQSGVVGVLATPATFQGA 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
++++ + + + L ++E + +E ++ +E + + D +
Sbjct: 121 LYASVVERFAQGVTLLQDTCAGLVQQIE----AGNLAGEETRRILENALLPMLARGMDTV 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHALFLSG 254
V+ CTHYP ++ + +Q+ V +D + ++AR+ R +L + +G
Sbjct: 177 VMGCTHYPFVIPLIQQIVGEQVRVIDPAPAVARQTRRVLEAHGWLVEGNQPAPVRFLTTG 236
Query: 255 KPDIAMRRLMQGFG 268
+ R + Q G
Sbjct: 237 DGEAFRRMIRQLLG 250
>gi|307150996|ref|YP_003886380.1| glutamate racemase [Cyanothece sp. PCC 7822]
gi|306981224|gb|ADN13105.1| glutamate racemase [Cyanothece sp. PCC 7822]
Length = 278
Score = 247 bits (632), Expect = 8e-64, Method: Composition-based stats.
Identities = 60/257 (23%), Positives = 101/257 (39%), Gaps = 7/257 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ I IFDSG+GGL VL+++ +P +Y AD PYG + + + + +
Sbjct: 6 RSPIGIFDSGVGGLTVLRELYRQLPNESILYFADTARLPYGTRSAGEILEFVREIMDWM- 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Q + ++ACNT+ L D +R F +P + A + I +++TPAT
Sbjct: 65 TAQQVKMVIMACNTSSALALDAVRDEFDVPVLGVILPGARAAVQ--KGKRIGVIATPATA 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I V + V +E+ +I E K+ + +
Sbjct: 123 ASNAYRQAIEEIVPTAQVWQVGCPEFVPLIEQN----RIYEPLTKEVAKQYLKPLLQLKI 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +V CTHY + +FRQ+ P V +D + + A L + +
Sbjct: 179 DTLVYGCTHYRHLEPLFRQILPSSVRLVDPARYVVSAAEKELELLGLKSNFPSVPTRFCV 238
Query: 253 SGKPDIAMRRLMQGFGL 269
SG P+ Q G
Sbjct: 239 SGNPETFAVLSRQWLGY 255
>gi|288905998|ref|YP_003431220.1| glutamate racemase [Streptococcus gallolyticus UCN34]
gi|306832017|ref|ZP_07465172.1| glutamate racemase [Streptococcus gallolyticus subsp. gallolyticus
TX20005]
gi|288732724|emb|CBI14298.1| glutamate racemase [Streptococcus gallolyticus UCN34]
gi|304425943|gb|EFM29060.1| glutamate racemase [Streptococcus gallolyticus subsp. gallolyticus
TX20005]
Length = 269
Score = 247 bits (632), Expect = 9e-64, Method: Composition-based stats.
Identities = 61/257 (23%), Positives = 103/257 (40%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P +Y+ D PYG +++ L + L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIREYTWELVN-FL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V ACNTA + +E++ +P A T++G I ++ TP T+
Sbjct: 62 LTQNVKMIVFACNTATAVAWEEVKEKLDIPVLGVILPGSSAAIKSTRNGKIGVIGTPMTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I S Q ++ +S A VE + KK + GK
Sbjct: 122 KSDIYHQKIKSLAPQMNVTSLSCPKFAPLVESNE----MTSSVAKKVVYETLAPLVGK-V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HAL 250
D +VL CTHYPL+ + + + V +D+ R LL +++R DD HA
Sbjct: 177 DTLVLGCTHYPLLRPIIQNVMGPNVKLIDSGAECIRDVSVLLNYFEINRSRTQDDVTHAF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
+ + +
Sbjct: 237 YTTASSQSFKEIAVNWL 253
>gi|171780258|ref|ZP_02921162.1| hypothetical protein STRINF_02046 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281606|gb|EDT47041.1| hypothetical protein STRINF_02046 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 269
Score = 247 bits (632), Expect = 9e-64, Method: Composition-based stats.
Identities = 56/258 (21%), Positives = 101/258 (39%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P +Y+ D PYG +++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIREYTWELVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + V ACNTA + E++ +P A T++G I I+ TP T+
Sbjct: 63 TK-NVKMIVFACNTATAVAWKEVKEKLDIPVLGVILPGSSAAIKSTRNGKIGIIGTPMTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I S + + ++ VE G + + + + + +
Sbjct: 122 NSEVYPEKIKSLSPKMEVSGLACSKFVPIVESNEMGSSVAKKVVYESLAPLVGK-----V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHAL 250
D +VL CTHYPL+ + + + V +D+ R LL + +R + DH
Sbjct: 177 DTLVLGCTHYPLLRPIIQNVMGPNVKLIDSGAECIRDVSVLLNYFEINHSRTENAVDHHF 236
Query: 251 FLSGKPDIAMRRLMQGFG 268
+ + + G
Sbjct: 237 YTTASSQRFKEIAVNWLG 254
>gi|49082808|gb|AAT50804.1| PA4662 [synthetic construct]
Length = 266
Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats.
Identities = 67/256 (26%), Positives = 117/256 (45%), Gaps = 5/256 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ +FDSG+GGL VL+++R +P +YVAD+ PYG +++R D L
Sbjct: 5 SAAVGVFDSGVGGLSVLREIRARLPSESLLYVADNAHVPYGEKSAEYIRER-CERIGDFL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA ELR +P + + PA+K AAA T++G + +L+T TL
Sbjct: 64 LEQGAKALVLACNTATAAAAAELRERYPQVPLVAMEPAVKPAAAATRNGRVGVLATTGTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + S + L R+E + + + +E +
Sbjct: 124 KSARFAALLDRFASDVQVFTQPCPGLVERIE----AGDLYGPQTRALLERLLAPILEQGC 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP + + +L P + +D ++AR+ +L + +
Sbjct: 180 DTLILGCTHYPFVKPLLAELIPAEMAVIDTGAAVARQLERVLSARALLASGQAATPRFWT 239
Query: 253 SGKPDIAMRRLMQGFG 268
S P+ R L +G
Sbjct: 240 SALPEEMERILPILWG 255
>gi|328956948|ref|YP_004374334.1| glutamate racemase [Carnobacterium sp. 17-4]
gi|328673272|gb|AEB29318.1| glutamate racemase [Carnobacterium sp. 17-4]
Length = 272
Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats.
Identities = 54/259 (20%), Positives = 96/259 (37%), Gaps = 8/259 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +I DSG+GGL V+++ +P YV D PYG + + + + L
Sbjct: 3 KQAIGFIDSGVGGLTVVKEAMRQLPNESIYYVGDTARCPYGPRPEEQILQFTWE-MTHFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA + ++L+ +P + A T++ I I+ T T+
Sbjct: 62 LNKDIKMLVIACNTATAVALEDLKKKLAIPIIGVILPGSRAAIKATKNNRIGIIGTEGTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ +I S + + ++ VE KK + + K
Sbjct: 122 KSDKYRKMIRSKDTLASVESLACPKFVPLVESNEY----DSAIAKKIVTETLKPIKNKNI 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH---A 249
D +VL CTHYPL+ + + V +D+ +L N + +
Sbjct: 178 DTLVLGCTHYPLLRPIIQNFMGDSVTLIDSGAETISEVSTILDYFNLAELSKNKEVSERK 237
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+ +G + Q G
Sbjct: 238 FYTTGSTHMFNDIASQWLG 256
>gi|15599857|ref|NP_253351.1| glutamate racemase [Pseudomonas aeruginosa PAO1]
gi|107099671|ref|ZP_01363589.1| hypothetical protein PaerPA_01000689 [Pseudomonas aeruginosa PACS2]
gi|218893759|ref|YP_002442628.1| glutamate racemase [Pseudomonas aeruginosa LESB58]
gi|296391483|ref|ZP_06880958.1| glutamate racemase [Pseudomonas aeruginosa PAb1]
gi|20177990|sp|Q9HVD0|MURI_PSEAE RecName: Full=Glutamate racemase
gi|226722988|sp|B7V0K8|MURI_PSEA8 RecName: Full=Glutamate racemase
gi|9950917|gb|AAG08049.1|AE004880_5 glutamate racemase [Pseudomonas aeruginosa PAO1]
gi|218773987|emb|CAW29802.1| glutamate racemase [Pseudomonas aeruginosa LESB58]
Length = 265
Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats.
Identities = 67/256 (26%), Positives = 117/256 (45%), Gaps = 5/256 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ +FDSG+GGL VL+++R +P +YVAD+ PYG +++R D L
Sbjct: 5 SAAVGVFDSGVGGLSVLREIRARLPSESLLYVADNAHVPYGEKSAEYIRER-CERIGDFL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA ELR +P + + PA+K AAA T++G + +L+T TL
Sbjct: 64 LEQGAKALVLACNTATAAAAAELRERYPQVPLVAMEPAVKPAAAATRNGRVGVLATTGTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + S + L R+E + + + +E +
Sbjct: 124 KSARFAALLDRFASDVQVFTQPCPGLVERIE----AGDLYGPQTRALLERLLAPILEQGC 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP + + +L P + +D ++AR+ +L + +
Sbjct: 180 DTLILGCTHYPFVKPLLAELIPAEMAVIDTGAAVARQLERVLSARALLASGQAATPRFWT 239
Query: 253 SGKPDIAMRRLMQGFG 268
S P+ R L +G
Sbjct: 240 SALPEEMERILPILWG 255
>gi|313624059|gb|EFR94143.1| glutamate racemase [Listeria innocua FSL J1-023]
Length = 266
Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats.
Identities = 53/257 (20%), Positives = 95/257 (36%), Gaps = 6/257 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I DSG+GGL V++++ +P Y+ D PYG + + + ++
Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAQFTWE-MTNF 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + VIACNTA ++R P + A T++ I +L T T
Sbjct: 60 LVDRGIKMLVIACNTATAAALYDIREKLDIPVIGVIQPGSRAALKATRNNKIGVLGTLGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + + ++ S VE KK + + + +
Sbjct: 120 VESMAYPTALKGLNRRVEVDSLACPKFVSVVESGEYK----SAIAKKVVAESLLPLKSTK 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHAL 250
D ++L CTHYPL+ + V +++ + A LL N T +H
Sbjct: 176 IDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDATDEEIEHRF 235
Query: 251 FLSGKPDIAMRRLMQGF 267
F +G I
Sbjct: 236 FTTGSTQIFKDIAKDWL 252
>gi|172058162|ref|YP_001814622.1| glutamate racemase [Exiguobacterium sibiricum 255-15]
gi|229486273|sp|B1YJW7|MURI_EXIS2 RecName: Full=Glutamate racemase
gi|171990683|gb|ACB61605.1| glutamate racemase [Exiguobacterium sibiricum 255-15]
Length = 271
Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats.
Identities = 56/257 (21%), Positives = 92/257 (35%), Gaps = 6/257 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ SI + DSG+GGL V +++ +P IYV D + PYG + +++ +
Sbjct: 1 MNRSIGVLDSGVGGLTVARELMRQLPHEQIIYVGDTLRCPYGPRPEEEIRQFTWEMID-F 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L L VIACNTA ++ E R P + A T+S I ++ T T
Sbjct: 60 LVAQGVKLIVIACNTATAVVLKEARQKLSIPVIGVIDPGARAAVKVTRSKRIGVIGTKMT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + Q + +S VE +++ +
Sbjct: 120 IESNSYEKALRHVEGQVVVESLSCPPFVPLVESSQTSGPY----VERVVANTLKPLLSYD 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHAL 250
D ++L CTHYPL+ V ++ V + + D A LL +H
Sbjct: 176 MDTLILGCTHYPLLAEVIGRVIGPNVQLISSGDETALEVSALLDYNGITADLDRIPEHVY 235
Query: 251 FLSGKPDIAMRRLMQGF 267
+G R
Sbjct: 236 HATGDTRSFERIASDWL 252
>gi|227822188|ref|YP_002826159.1| glutamate racemase [Sinorhizobium fredii NGR234]
gi|254766122|sp|C3MD87|MURI_RHISN RecName: Full=Glutamate racemase
gi|227341188|gb|ACP25406.1| glutamate racemase [Sinorhizobium fredii NGR234]
Length = 267
Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats.
Identities = 146/256 (57%), Positives = 194/256 (75%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
IL+FDSGIGGL VL++ R LMPE HFIYVADD GFPYG WE+ ALK+R++ LF D+L
Sbjct: 7 KPILVFDSGIGGLTVLREARVLMPERHFIYVADDAGFPYGGWEEGALKERVIALFGDLLR 66
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++ P + +IACNTAFTL+ +LR+ +P M F+G VPAIK AA T+SGL+S+L+TP T++
Sbjct: 67 EHDPEICIIACNTAFTLVGADLRAAYPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 126
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI S+ SQCH+ LV S LA E Y G K++++ + EI CF+E +G++TD
Sbjct: 127 RAYTRDLIQSFASQCHVRLVGSENLARMAEAYIRGEKLEDEIVLAEIAPCFVEMDGRKTD 186
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++VLACTHYP + +VFR+L+PWPVDWLD +++IARRAR L+P N + +D A+F S
Sbjct: 187 IVVLACTHYPFMENVFRRLAPWPVDWLDPAEAIARRARSLVPLPNGFEPLNGEDPAIFTS 246
Query: 254 GKPDIAMRRLMQGFGL 269
GKPD A RRLMQGFGL
Sbjct: 247 GKPDFATRRLMQGFGL 262
>gi|167461654|ref|ZP_02326743.1| glutamate racemase [Paenibacillus larvae subsp. larvae BRL-230010]
gi|322384236|ref|ZP_08057946.1| glutamate racemase-like protein [Paenibacillus larvae subsp. larvae
B-3650]
gi|321151128|gb|EFX44445.1| glutamate racemase-like protein [Paenibacillus larvae subsp. larvae
B-3650]
Length = 268
Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats.
Identities = 65/257 (25%), Positives = 111/257 (43%), Gaps = 6/257 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+Q +I I DSG+GGL V++++ +P+ IY D PYG +K +
Sbjct: 1 MQQAIAILDSGVGGLTVVKEVMRQLPQEQIIYFGDSARSPYGPRPADEVKLFTRQVVD-Y 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L ++ P + VIACNTA + +E+R P + A ++G I ++ T T
Sbjct: 60 LIEFHPKMIVIACNTATAVALEEIRQRVAIPVVGVISPGARAAIKMARTGSIGVIGTDGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R + + +H S +LA VE+ +E + +E + K
Sbjct: 120 IRSGAYEETLKTISPTIQVHSQSCPLLAPMVEKGIFNG----EEALQVVESSLLPLLDKS 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHAL 250
D ++L CTHYP + V ++ V +++++ AR +L N T F +H
Sbjct: 176 MDCLILGCTHYPYLADVIGKVMGPEVCLINSAEETAREVSTILQHQNQLATGKFRPEHRF 235
Query: 251 FLSGKPDIAMRRLMQGF 267
F SG P + +
Sbjct: 236 FCSGDPVLFKKITDIWL 252
>gi|315282014|ref|ZP_07870520.1| glutamate racemase [Listeria marthii FSL S4-120]
gi|313614341|gb|EFR87979.1| glutamate racemase [Listeria marthii FSL S4-120]
Length = 266
Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats.
Identities = 53/257 (20%), Positives = 94/257 (36%), Gaps = 6/257 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I DSG+GGL V++++ +P Y+ D PYG + + + ++
Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVARFTWE-MTNF 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + VIACNTA ++R P + A T++ I +L T T
Sbjct: 60 LVDRGIKMLVIACNTATAAALYDIREKLDIPVIGVIQPGSRAALKATRNNKIGVLGTLGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + + ++ S VE KK + + +
Sbjct: 120 VESMAYPTALKGLNRRVEVDSLACPKFVSVVESGEYK----SAIAKKVVAESLLPLKSTN 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHAL 250
D ++L CTHYPL+ + V +++ + A LL N T +H
Sbjct: 176 IDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDATDEEIEHRF 235
Query: 251 FLSGKPDIAMRRLMQGF 267
F +G I
Sbjct: 236 FTTGSTQIFKDIAKDWL 252
>gi|16803277|ref|NP_464762.1| glutamate racemase [Listeria monocytogenes EGD-e]
gi|46907456|ref|YP_013845.1| glutamate racemase [Listeria monocytogenes serotype 4b str. F2365]
gi|47097378|ref|ZP_00234930.1| glutamate racemase [Listeria monocytogenes str. 1/2a F6854]
gi|224499092|ref|ZP_03667441.1| glutamate racemase [Listeria monocytogenes Finland 1988]
gi|224503808|ref|ZP_03672115.1| glutamate racemase [Listeria monocytogenes FSL R2-561]
gi|226223837|ref|YP_002757944.1| glutamate racemase [Listeria monocytogenes Clip81459]
gi|254823509|ref|ZP_05228510.1| racE [Listeria monocytogenes FSL J1-194]
gi|254828597|ref|ZP_05233284.1| glutamate racemase [Listeria monocytogenes FSL N3-165]
gi|254830009|ref|ZP_05234664.1| glutamate racemase [Listeria monocytogenes 10403S]
gi|254852894|ref|ZP_05242242.1| racE [Listeria monocytogenes FSL R2-503]
gi|254898602|ref|ZP_05258526.1| glutamate racemase [Listeria monocytogenes J0161]
gi|254932885|ref|ZP_05266244.1| racE [Listeria monocytogenes HPB2262]
gi|254936234|ref|ZP_05267931.1| racE [Listeria monocytogenes F6900]
gi|254993152|ref|ZP_05275342.1| glutamate racemase [Listeria monocytogenes FSL J2-064]
gi|255025221|ref|ZP_05297207.1| glutamate racemase [Listeria monocytogenes FSL J2-003]
gi|255522515|ref|ZP_05389752.1| glutamate racemase [Listeria monocytogenes FSL J1-175]
gi|284801557|ref|YP_003413422.1| hypothetical protein LM5578_1310 [Listeria monocytogenes 08-5578]
gi|284994699|ref|YP_003416467.1| hypothetical protein LM5923_1263 [Listeria monocytogenes 08-5923]
gi|290893281|ref|ZP_06556267.1| racE protein [Listeria monocytogenes FSL J2-071]
gi|300764386|ref|ZP_07074380.1| glutamate racemase [Listeria monocytogenes FSL N1-017]
gi|20177977|sp|Q8Y7N7|MURI_LISMO RecName: Full=Glutamate racemase
gi|67460886|sp|Q720J2|MURI_LISMF RecName: Full=Glutamate racemase
gi|259509916|sp|C1L2E2|MURI_LISMC RecName: Full=Glutamate racemase
gi|16410653|emb|CAC99315.1| racE [Listeria monocytogenes EGD-e]
gi|46880724|gb|AAT04022.1| glutamate racemase [Listeria monocytogenes serotype 4b str. F2365]
gi|47014250|gb|EAL05231.1| glutamate racemase [Listeria monocytogenes str. 1/2a F6854]
gi|225876299|emb|CAS05008.1| Putative glutamate racemase [Listeria monocytogenes serotype 4b
str. CLIP 80459]
gi|258600995|gb|EEW14320.1| glutamate racemase [Listeria monocytogenes FSL N3-165]
gi|258606229|gb|EEW18837.1| racE [Listeria monocytogenes FSL R2-503]
gi|258608824|gb|EEW21432.1| racE [Listeria monocytogenes F6900]
gi|284057119|gb|ADB68060.1| hypothetical protein LM5578_1310 [Listeria monocytogenes 08-5578]
gi|284060166|gb|ADB71105.1| hypothetical protein LM5923_1263 [Listeria monocytogenes 08-5923]
gi|290557089|gb|EFD90617.1| racE protein [Listeria monocytogenes FSL J2-071]
gi|293584439|gb|EFF96471.1| racE [Listeria monocytogenes HPB2262]
gi|293592729|gb|EFG00490.1| racE [Listeria monocytogenes FSL J1-194]
gi|300515038|gb|EFK42091.1| glutamate racemase [Listeria monocytogenes FSL N1-017]
gi|313609160|gb|EFR84843.1| glutamate racemase [Listeria monocytogenes FSL F2-208]
gi|328466631|gb|EGF37766.1| glutamate racemase [Listeria monocytogenes 1816]
gi|328475255|gb|EGF46036.1| glutamate racemase [Listeria monocytogenes 220]
gi|332311623|gb|EGJ24718.1| Glutamate racemase [Listeria monocytogenes str. Scott A]
Length = 266
Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats.
Identities = 54/257 (21%), Positives = 95/257 (36%), Gaps = 6/257 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I DSG+GGL V++++ +P Y+ D PYG + + K ++
Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWE-MTNF 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + VIACNTA ++R P + A T++ I +L T T
Sbjct: 60 LVDRGIKMLVIACNTATAAALYDIREKLDIPVIGVIQPGSRAALKATRNNKIGVLGTLGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + + ++ S VE KK + + + +
Sbjct: 120 VESMAYPTALKGLNRRVEVDSLACPKFVSVVESGEYK----SAIAKKVVAESLLPLKSTK 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHAL 250
D ++L CTHYPL+ + V +++ + A LL N T +H
Sbjct: 176 IDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDATDEEIEHRF 235
Query: 251 FLSGKPDIAMRRLMQGF 267
F +G I
Sbjct: 236 FTTGSTQIFKDIAKDWL 252
>gi|313107324|ref|ZP_07793519.1| glutamate racemase [Pseudomonas aeruginosa 39016]
gi|310880021|gb|EFQ38615.1| glutamate racemase [Pseudomonas aeruginosa 39016]
Length = 265
Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats.
Identities = 67/256 (26%), Positives = 117/256 (45%), Gaps = 5/256 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ +FDSG+GGL VL+++R +P +YVAD+ PYG +++R D L
Sbjct: 5 SAAVGVFDSGVGGLSVLREIRARLPSESLLYVADNAHVPYGEKSAEYIRER-CERIGDFL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA ELR +P + + PA+K AAA T++G + +L+T TL
Sbjct: 64 LEQGAKALVLACNTATAAAAAELRERYPQVPLVAMEPAVKPAAAATRNGGVGVLATTGTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + S + L R+E + + + +E +
Sbjct: 124 KSARFAALLDRFASDVQVFTQPCPGLVERIE----AGDLYGPQTRALLERLLAPILEQGC 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP + + +L P + +D ++AR+ +L + +
Sbjct: 180 DTLILGCTHYPFVKPLLAELIPAEMAVIDTGAAVARQLERVLSARALLASGQAATPRFWT 239
Query: 253 SGKPDIAMRRLMQGFG 268
S P+ R L +G
Sbjct: 240 SALPEEMERILPILWG 255
>gi|16800269|ref|NP_470537.1| glutamate racemase [Listeria innocua Clip11262]
gi|20177980|sp|Q92CH2|MURI_LISIN RecName: Full=Glutamate racemase
gi|16413659|emb|CAC96431.1| racE [Listeria innocua Clip11262]
gi|313619282|gb|EFR91023.1| glutamate racemase [Listeria innocua FSL S4-378]
Length = 266
Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats.
Identities = 53/257 (20%), Positives = 95/257 (36%), Gaps = 6/257 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I DSG+GGL V++++ +P Y+ D PYG + + + ++
Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAQFTWE-MTNF 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + VIACNTA ++R P + A T++ I +L T T
Sbjct: 60 LVDRGIKMLVIACNTATAAALYDIREKLDIPVIGVIQPGSRAALKATRNNKIGVLGTLGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + + ++ S VE KK + + + +
Sbjct: 120 VESMAYPTALKGLNRRVEVDSLACPKFVSVVESGEYK----SAIAKKVVAESLLPLKSTK 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHAL 250
D ++L CTHYPL+ + V +++ + A LL N T +H
Sbjct: 176 IDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDATDDEIEHRF 235
Query: 251 FLSGKPDIAMRRLMQGF 267
F +G I
Sbjct: 236 FTTGSTQIFKDIAKDWL 252
>gi|226946178|ref|YP_002801251.1| glutamate racemase [Azotobacter vinelandii DJ]
gi|226721105|gb|ACO80276.1| glutamate racemase [Azotobacter vinelandii DJ]
Length = 263
Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats.
Identities = 69/259 (26%), Positives = 116/259 (44%), Gaps = 6/259 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ + +FDSG+GGL VL ++R +P YVAD PYG +++R + +
Sbjct: 1 MASEAPVGVFDSGVGGLSVLSEIRARLPGESLFYVADSGHVPYGEKSSEYIRERCRHIAA 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+L++ V+ACNTA ELR +P + +G PA+K AAA T+SG + +L+T
Sbjct: 61 FLLER-GAKALVLACNTATAAAVAELRELYPELPVIGMEPAVKPAAAATRSGRVGVLATS 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
TL+ + L+ + + L R+E + ++ + G
Sbjct: 120 GTLKSARFAALLDRFAGDVRVITQPCPGLVERIE----AGDLDGPATRELLRGFVAPLLA 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+ D ++L CTHYP + + L P + +D ++AR+ LL +
Sbjct: 176 EGCDTLILGCTHYPFVRPLLGTLVPDSISLIDTGAAVARQLERLLQERDLLAAGPAAA-R 234
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+ SG P R L +G
Sbjct: 235 FWSSGDPLGLERVLPLLWG 253
>gi|332710932|ref|ZP_08430868.1| glutamate racemase [Lyngbya majuscula 3L]
gi|332350246|gb|EGJ29850.1| glutamate racemase [Lyngbya majuscula 3L]
Length = 298
Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats.
Identities = 63/260 (24%), Positives = 101/260 (38%), Gaps = 7/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ + I IFDSG+GGL VL+++ +P IY AD PYG + + + S
Sbjct: 12 QPQSSPIGIFDSGVGGLTVLRELYKQLPSESIIYFADTARLPYGTRSTDEIVQFGFEILS 71
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
++ + + V+ACNT+ L + LRS F +P + A Q I +++TP
Sbjct: 72 WMV-QQDVKMVVMACNTSSALALETLRSEFDIPMLGLILPGARAAL--HQGRRIGVIATP 128
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT N I + V VE+ +
Sbjct: 129 ATAASNAYRNAILEVEPTAQVWQVGCPEFVPLVEQNRLCEPYTTAVAR----QYLEPLLA 184
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+ D +V CTHYP + + R++ P V +D + + A L I T
Sbjct: 185 AQIDTLVYGCTHYPHLEPILREILPPDVKLVDPAKYVVAAAAQELDLIGGKNTGEARPTR 244
Query: 250 LFLSGKPDIAMRRLMQGFGL 269
+SG P ++ +Q G
Sbjct: 245 FGVSGCPQQFAQQSLQWLGY 264
>gi|146296395|ref|YP_001180166.1| glutamate racemase [Caldicellulosiruptor saccharolyticus DSM 8903]
gi|145409971|gb|ABP66975.1| glutamate racemase [Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 267
Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats.
Identities = 57/255 (22%), Positives = 98/255 (38%), Gaps = 7/255 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL V +++ LMP +Y D PYG+ + K M + L
Sbjct: 4 RPIGIFDSGLGGLTVFKEIVNLMPNESIVYFGDTARIPYGSKSKETVTKFAMQN-TRFLL 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ V+ACNTA + L+ F P + AA T++ + ++ T T+
Sbjct: 63 SKNIKIVVVACNTASAYAYEFLKGQFDIPIIAVIEPGARAAALATKNKKVGVIGTEGTIA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I + + + VE I ++ + E + K D
Sbjct: 123 SGSFEKKILEFDPDIKVFSKPCPLFVPLVE----EGWIDKEVTYLVAKEYLEEFKEKGID 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALFL 252
+VL CTHYP + +V +++ P V ++ + A++ +L + N T + +
Sbjct: 179 TLVLGCTHYPFLQNVIKKILPE-VTLINPALETAKQTYEVLKQNNMLNTSDEEPTYYFYA 237
Query: 253 SGKPDIAMRRLMQGF 267
S
Sbjct: 238 SDNLKKFEAVASIFL 252
>gi|15827591|ref|NP_301854.1| glutamate racemase [Mycobacterium leprae TN]
gi|221230068|ref|YP_002503484.1| glutamate racemase [Mycobacterium leprae Br4923]
gi|1171077|sp|P46705|MURI_MYCLE RecName: Full=Glutamate racemase
gi|254766120|sp|B8ZR57|MURI_MYCLB RecName: Full=Glutamate racemase
gi|466915|gb|AAA50890.1| murI [Mycobacterium leprae]
gi|13093142|emb|CAC31553.1| glutamate racemase [Mycobacterium leprae]
gi|219933175|emb|CAR71267.1| glutamate racemase [Mycobacterium leprae Br4923]
Length = 272
Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 105/256 (41%), Gaps = 8/256 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ +FDSG+GGL V + + +P+ +YV D PYG ++ + + D L
Sbjct: 7 PVGVFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLSIPEIRAHALAICDD-LVG 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ VIACNTA + R + +PA+++A A T++G I ++ T AT+
Sbjct: 66 RGVKILVIACNTASAACLRDARERYDVPVVEVILPAVRRAVAATRNGRIGVIGTRATIAS 125
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + I V+ VE + ++ EG + D
Sbjct: 126 HAYQDAFAA-ARDTEITAVACPRFVDFVECGVTSGR----QVLGLAEGYLEPLQRSGVDT 180
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHALFL 252
+VL CTHYPL+ + + V + +++ A+ +L + + +
Sbjct: 181 LVLGCTHYPLLAGLIQLAMGENVTLVSSAEETAKEVLRVLTERDLLRRHDAPPVNRVFEA 240
Query: 253 SGKPDIAMRRLMQGFG 268
+G P+ ++ + G
Sbjct: 241 TGDPEAFIQLAARFLG 256
>gi|325690950|gb|EGD32950.1| glutamate racemase [Streptococcus sanguinis SK115]
Length = 264
Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 102/260 (39%), Gaps = 8/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P IY+ D PYG ++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRAYTWQLVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNTA ++ +E++ +P A T SG I ++ TP T+
Sbjct: 63 TK-DVKMIVIACNTATAVVWEEVKEKLDIPVLGVILPGASAAIKSTASGRIGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + + + ++ VE + + + + ++ R
Sbjct: 122 SSDIYRQKIEALSPEMQVESLACPKFVPLVESNELHSSLTKKVVYETLQP-----LAGRV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHAL 250
D +VL CTHYPL+ + + + V +D+ R LL +++R +H
Sbjct: 177 DTLVLGCTHYPLLRPIIQNMMGPDVKLIDSGAECVRDISVLLNYFEINRSREKQELNHQF 236
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
+ + LK
Sbjct: 237 YTTANAKSFSEIAESWLDLK 256
>gi|224823853|ref|ZP_03696962.1| glutamate racemase [Lutiella nitroferrum 2002]
gi|224604308|gb|EEG10482.1| glutamate racemase [Lutiella nitroferrum 2002]
Length = 270
Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats.
Identities = 53/262 (20%), Positives = 109/262 (41%), Gaps = 7/262 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K + I +FDSG+GGL V++ + +P IY D PYG ++ +
Sbjct: 4 KARRPIGVFDSGVGGLTVVRALMDRLPFEDIIYFGDTARVPYGVKSVATIRAFSRQIVE- 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTP 129
L +++ V+ACNT + +++R + +G + A + A +++ I +++T
Sbjct: 63 FLLQHEVKALVVACNTISAVALEQVRELAGDIPVIGVIEAGAQAAVKVSKNHEIGVIATS 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ + IH + ++ + + VE + + E
Sbjct: 123 TTINSNAYAREIHRLMPDARVYSQACPLFVPLVE----EGWVDHPVTRLTAEEYLKTVLE 178
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDH 248
+ D +VL CTHYPLI + +++ V+ +D++ + A +L +N R ++
Sbjct: 179 EHVDTLVLGCTHYPLIKPLLTEVTGGRVELVDSALTTAEATAEVLAGLNLLNPQRGAPEY 238
Query: 249 ALFLSGKPDIAMRRLMQGFGLK 270
+++ P + G
Sbjct: 239 RYYVTDIPLKFQTIGERFLGRS 260
>gi|322385930|ref|ZP_08059571.1| glutamate racemase [Streptococcus cristatus ATCC 51100]
gi|321270045|gb|EFX52964.1| glutamate racemase [Streptococcus cristatus ATCC 51100]
Length = 264
Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats.
Identities = 54/260 (20%), Positives = 102/260 (39%), Gaps = 8/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P +Y+ D PYG ++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEVVYIGDSARAPYGPRPAEQIRDYTWQLVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNTA ++ +E+++ +P A T G I ++ TP T+
Sbjct: 63 TK-DVKMIVIACNTATAVVWEEVKAKLDIPVLGVILPGASAAIKSTTGGKIGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I + + + ++ VE + + + + + +
Sbjct: 122 QSDIYRKKIEALSPEMEVQSLACPKFVPLVESNELQSSLTKKVVYETLHP-----LAGKV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHAL 250
D +VL CTHYPL+ + + + V +D+ R LL +++R +H
Sbjct: 177 DTLVLGCTHYPLLRPIIQNMMGPSVKLIDSGAECVRDISVLLNYFEINRSRDKHELNHRF 236
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
+ + LK
Sbjct: 237 YTTANAKRFAEIAENWLNLK 256
>gi|116872608|ref|YP_849389.1| glutamate racemase [Listeria welshimeri serovar 6b str. SLCC5334]
gi|123466205|sp|A0AHX8|MURI_LISW6 RecName: Full=Glutamate racemase
gi|116741486|emb|CAK20610.1| glutamate racemase [Listeria welshimeri serovar 6b str. SLCC5334]
Length = 266
Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats.
Identities = 54/257 (21%), Positives = 95/257 (36%), Gaps = 6/257 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I DSG+GGL V++++ +P Y+ D PYG + + K ++
Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWE-MTNF 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + VIACNTA ++R P + A T++ I +L T T
Sbjct: 60 LVDRGIKMLVIACNTATAAALYDIREKLDIPVIGVIQPGSRAALKATKNNKIGVLGTIGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + + ++ S VE KK + + + +
Sbjct: 120 VESMAYPTALKGLNRRVEVDSLACPKFVSVVESGEYK----SAIAKKVVAESLLPLKSTK 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHAL 250
D ++L CTHYPL+ + V +++ + A LL N T +H
Sbjct: 176 IDTVILGCTHYPLLKPIIENFMGDGVSVINSGEETASEVSALLDYHNLLDATDEEIEHRF 235
Query: 251 FLSGKPDIAMRRLMQGF 267
F +G I
Sbjct: 236 FTTGSTQIFKDIAKDWL 252
>gi|172037379|ref|YP_001803880.1| glutamate racemase [Cyanothece sp. ATCC 51142]
gi|171698833|gb|ACB51814.1| glutamate racemase [Cyanothece sp. ATCC 51142]
Length = 281
Score = 247 bits (630), Expect = 2e-63, Method: Composition-based stats.
Identities = 55/257 (21%), Positives = 102/257 (39%), Gaps = 7/257 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL VL+++ +P+ +Y AD PYGN E + + + + +
Sbjct: 6 NSPIGVFDSGVGGLTVLRELYRQLPQESILYFADTARLPYGNREASEILQFVREILVWM- 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + ++ACNT+ L + +R F +P K A + I ++STPAT
Sbjct: 65 TQQNVKMVIMACNTSSALALEAVRQEFDVPILGVILPGAKAAVKQGK--RIGVISTPATA 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I + + V +E+ K+ +
Sbjct: 123 KSQAYRQAIQEINPEAQVWQVGCPQFVPLIEQNRIWDVYT----KQVAQEYLSPLLAHDI 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++ CTHY + + + + P + +D + + + A+ L + +T +
Sbjct: 179 DTLIYGCTHYRHLEALIKTIIPPTIKLIDPASYVVQAAKKELELMGLSKTASASPTRFAV 238
Query: 253 SGKPDIAMRRLMQGFGL 269
SG D R Q G
Sbjct: 239 SGCSDTFSRLSQQWLGY 255
>gi|319441880|ref|ZP_07991036.1| glutamate racemase [Corynebacterium variabile DSM 44702]
Length = 277
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 58/263 (22%), Positives = 104/263 (39%), Gaps = 13/263 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL V + + +PE IY+ D PYG+ +++ + D L
Sbjct: 7 NSPIGVFDSGVGGLTVARAIVDQLPEESMIYIGDTANSPYGDKPLAVVRELATAIADD-L 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA + R +P +PA+++A + T++G + ++ T AT+
Sbjct: 66 VDRGCKMIVVACNTASAAFLRDARERYPVPIIEVILPAVRRAVSVTRNGRVGVIGTHATI 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+L + + VE + +I E + +
Sbjct: 126 TSGAYQDLFRA-NPNVEVFAQDCPQFVPFVERGITTGR----QILGLAEAYLEPLKDEGV 180
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD----- 247
D +VL CTHYPL+ V + + V +++++ + L R D
Sbjct: 181 DTLVLGCTHYPLLTGVLQLVMGDDVTLVNSAEETMKTVYRTLNEQGILADRSPGDGAGEQ 240
Query: 248 --HALFLSGKPDIAMRRLMQGFG 268
H +G P + G
Sbjct: 241 PVHTFESTGDPQRFAHLASRFLG 263
>gi|239636354|ref|ZP_04677356.1| glutamate racemase [Staphylococcus warneri L37603]
gi|239597709|gb|EEQ80204.1| glutamate racemase [Staphylococcus warneri L37603]
Length = 265
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 54/261 (20%), Positives = 96/261 (36%), Gaps = 5/261 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ +
Sbjct: 1 MNRPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRSGEEVKQFTTEIAQK- 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L ++ + VIACNTA + + L++ P P + A T++ + IL T T
Sbjct: 60 LVEFDIKMLVIACNTATAVALEHLQNILPIPVIGVIEPGARTAIMTTKNQNVLILGTEGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ I ++ ++ VE+ + I +
Sbjct: 120 IKSEAYRKHIKRINPNVEVYGIACPGFVPLVEQMRYNDPTITSIV---IHQTLKQWRNSE 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D ++L CTHYPL+ + + AR LL N H + H
Sbjct: 177 ADTVILGCTHYPLLYQPINDYFGGKKTVISSGLETAREVSALLTFSNEHASYTQHPPHRF 236
Query: 251 FLSGKPDIAMRRLMQGFGLKS 271
F +G + + G+ +
Sbjct: 237 FATGDTTHIENIIKEWLGMDT 257
>gi|17227590|ref|NP_484138.1| glutamate racemase [Nostoc sp. PCC 7120]
gi|11386941|sp|Q9L870|MURI_ANASP RecName: Full=Glutamate racemase
gi|6969397|gb|AAF33755.1|AF216288_2 putative glutamate racemase [Nostoc sp. PCC 7120]
gi|17135072|dbj|BAB77618.1| glutamate racemase [Nostoc sp. PCC 7120]
Length = 292
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 57/264 (21%), Positives = 98/264 (37%), Gaps = 7/264 (2%)
Query: 6 YPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
+ ++ + I +FDSG+GGL VL+++ +P IY D PYG + +
Sbjct: 14 FSAQEPQRAPIGVFDSGVGGLTVLRQIYRQLPNESVIYFGDTARLPYGIRSQAEILTFVR 73
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI 125
+ + ++ + V+ACNT+ L D +R + +P K A + I +
Sbjct: 74 DILDWMQQQH-VKMVVMACNTSSALALDIVREEYDFPILGVILPGAKAAVQQGK--RIGV 130
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
+STPAT + I + V +E+ + +
Sbjct: 131 ISTPATAKSNAYRQAIWEIDPNVEVWQVGCPEFVPLIEQNRIQDPYTTEVAR----AYLE 186
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+ D +V CTHYPL+ V R L P V +D + + L + T
Sbjct: 187 PLIQQDIDTLVYGCTHYPLLAPVLRSLLPPQVKIIDPAVHVVTACTQELDLLGLSNTHPP 246
Query: 246 DDHALFLSGKPDIAMRRLMQGFGL 269
+SG P + + G
Sbjct: 247 LPTRFAVSGCPQQFSQSGVHWLGY 270
>gi|306834137|ref|ZP_07467257.1| glutamate racemase [Streptococcus bovis ATCC 700338]
gi|304423710|gb|EFM26856.1| glutamate racemase [Streptococcus bovis ATCC 700338]
Length = 269
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 60/257 (23%), Positives = 102/257 (39%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P +Y+ D PYG +++ L + L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIREYTWELVN-FL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V ACNTA + + ++ +P A T++G I ++ TP T+
Sbjct: 62 LTQNVKMIVFACNTATAVAWEAVKEKLDIPVLGVILPGSSAAIKSTRNGKIGVIGTPMTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I S Q ++ +S A VE + KK + GK
Sbjct: 122 KSDIYHQKIKSLAPQMNVTSLSCPKFAPLVESNE----MTSSVAKKVVYETLAPLVGK-V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HAL 250
D +VL CTHYPL+ + + + V +D+ R LL +++R DD HA
Sbjct: 177 DTLVLGCTHYPLLRPIIQNVMGPNVKLIDSGAECIRDVSVLLNYFEINRSRTQDDVTHAF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
+ + +
Sbjct: 237 YTTASSQSFKEIAVNWL 253
>gi|111220958|ref|YP_711752.1| glutamate racemase [Frankia alni ACN14a]
gi|111148490|emb|CAJ60161.1| Glutamate racemase [Frankia alni ACN14a]
Length = 306
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 101/256 (39%), Gaps = 8/256 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ +FDSG+GGL V + + +P +Y+ D PYG +++ + L
Sbjct: 5 PVGVFDSGVGGLTVARAILDQLPHEPLVYLGDTGRAPYGPRPIAEVRRYALECLDR-LVD 63
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L VIACNTA + R + +PA ++A A T+SG + ++ T AT+
Sbjct: 64 EGVKLLVIACNTASAACLRDARERYSVPVVEVIMPATRRAVAATRSGRVGVIGTVATIGS 123
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + + + V+ VE + ++ E + D
Sbjct: 124 RAYDDAF-TAAAGVDLTGVACPAFVDFVERGITSGR----QLLGLTEAYLAPLQEADVDT 178
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFDDHALFL 252
++L CTHYPL+ V + V + +++ A+ +L R + H
Sbjct: 179 VILGCTHYPLLTGVIGLVMGEGVTLVSSAEETAKDTYRVLARDGLFRDPDLPPPSHRFLT 238
Query: 253 SGKPDIAMRRLMQGFG 268
+G P + R + G
Sbjct: 239 TGDPTLFTRVGRRFLG 254
>gi|169829488|ref|YP_001699646.1| glutamate racemase [Lysinibacillus sphaericus C3-41]
gi|229486243|sp|B1HW77|MURI_LYSSC RecName: Full=Glutamate racemase
gi|168993976|gb|ACA41516.1| Glutamate racemase [Lysinibacillus sphaericus C3-41]
Length = 265
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 53/257 (20%), Positives = 97/257 (37%), Gaps = 6/257 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG ++ +
Sbjct: 1 MNAPIGVIDSGVGGLTVAKEIIKRLPNETIYYIGDTARCPYGPRSRQEVRNFTWQ-MAKA 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+K + VIACNTA + + L+ P + A T+ + +L+T T
Sbjct: 60 LEKMNIKMLVIACNTATAVALESLQRNMPFPVLGVINAGARAAVKKTKRHEVVVLATEGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + S + HI ++ VE + K I + ++
Sbjct: 120 IKSGAYEEALLSLNTSTHIIPLACPTFVPLVESGEYKG----EFATKLIAEGLKPLKNQQ 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHAL 250
D ++L CTHYP++ + V+ L +++ A+ A+ +L H
Sbjct: 176 FDTVILGCTHYPILQKQIEAVVGEEVNVLSSAEETAKDAQEMLAYNGTLANANTVPAHKF 235
Query: 251 FLSGKPDIAMRRLMQGF 267
F +G I
Sbjct: 236 FATGSVPIFRSIAENWL 252
>gi|257058497|ref|YP_003136385.1| glutamate racemase [Cyanothece sp. PCC 8802]
gi|256588663|gb|ACU99549.1| glutamate racemase [Cyanothece sp. PCC 8802]
Length = 281
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 58/257 (22%), Positives = 105/257 (40%), Gaps = 7/257 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL VL+++ +P+ +Y AD PYGN + + + + +
Sbjct: 6 NSPIGVFDSGVGGLTVLRELYRQLPQESMLYFADTARLPYGNRSGAEILQYVREILVWM- 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + ++ACNT+ L D +RS F +P + A Q I ++STPAT
Sbjct: 65 SQQNVKMVIMACNTSSALALDIVRSEFNFPILGVILPGARAAVK--QGQRIGVISTPATA 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I + + V +E +I + K+ +
Sbjct: 123 KSNAYRQAIQEINPKAQVWQVGCPEFVPLIE----ANRIHDPYTKQVAWKYLAPLLAQNI 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +V CTHY + +F+++ P V+ +D ++ + A+ L + +
Sbjct: 179 DTLVYGCTHYRHLSPIFQEIIPPTVNLIDPANFVVAAAKKELELMGLRHNEPPRPTRFAV 238
Query: 253 SGKPDIAMRRLMQGFGL 269
SG P + Q G
Sbjct: 239 SGCPQTFSQISQQWLGY 255
>gi|307243173|ref|ZP_07525346.1| glutamate racemase [Peptostreptococcus stomatis DSM 17678]
gi|306493434|gb|EFM65414.1| glutamate racemase [Peptostreptococcus stomatis DSM 17678]
Length = 270
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 55/256 (21%), Positives = 95/256 (37%), Gaps = 6/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+I +FDSG+GGL VL+++ +P IY D PYG+ + K + L
Sbjct: 3 NRAIGVFDSGLGGLTVLKEINKYLPNEDTIYFGDTARVPYGSRSKETIIKYTFQAIN-FL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
VIACNTA E R + + A T++ ++ ++ T AT+
Sbjct: 62 ASQNVKAIVIACNTASARALLEAREEYDIPIMGVIEAGARTAVYSTRNKVVGVIGTTATV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R + I + S + + I VEE +I K
Sbjct: 122 RSKAYNKAIKAKDSGIRVIGKACPIFVPLVEEGWSNKEISTMAAHM----YLDSLVEKGI 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALF 251
D +VL CTHYP++ ++ V ++ + A + +L + + F
Sbjct: 178 DSLVLGCTHYPILKRTIGEVVGKDVKLINPAKETALDLKDVLEKRDMMNDSDQKGSCKYF 237
Query: 252 LSGKPDIAMRRLMQGF 267
+S + + +
Sbjct: 238 VSDINEQFSKVASEFL 253
>gi|330811716|ref|YP_004356178.1| glutamate racemase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327379824|gb|AEA71174.1| Glutamate racemase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 263
Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats.
Identities = 65/251 (25%), Positives = 113/251 (45%), Gaps = 5/251 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL VL ++R L+P +YVAD PYG +++R + +D L
Sbjct: 3 EAPIGVLDSGVGGLSVLGEIRQLLPNESLLYVADCGHIPYGEKTPEYIRQRCS-IIADFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
V+ACNTA +LR FP +G PA+K AAA T+SG++ +L+T TL
Sbjct: 62 LGQGAKALVVACNTATVAAVADLRRDFPHWPIVGMEPAVKPAAAATRSGIVGVLATTGTL 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + + + L +E + + + ++
Sbjct: 122 QSAKFAALLDRFATDVRVITQPCPGLVELIET----GDLHSPALYQLLQHYVDPLLAAGC 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP + + ++ P + +D ++AR+ + LL + +
Sbjct: 178 DTLILGCTHYPFLKPLLARMIPEHISLIDTGAAVARQLQRLLAERELLAEGPAGETYFWT 237
Query: 253 SGKPDIAMRRL 263
S P + L
Sbjct: 238 SADPIHLRKIL 248
>gi|260587549|ref|ZP_05853462.1| glutamate racemase [Blautia hansenii DSM 20583]
gi|331084204|ref|ZP_08333310.1| glutamate racemase [Lachnospiraceae bacterium 6_1_63FAA]
gi|260541814|gb|EEX22383.1| glutamate racemase [Blautia hansenii DSM 20583]
gi|330402059|gb|EGG81632.1| glutamate racemase [Lachnospiraceae bacterium 6_1_63FAA]
Length = 273
Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats.
Identities = 54/252 (21%), Positives = 95/252 (37%), Gaps = 8/252 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GGL V +++ +P +Y D PYG+ + + + L
Sbjct: 8 PIGVFDSGVGGLTVAREIMRNLPHEKIVYFGDTARVPYGSKSKETILRYSRQIV-RFLQT 66
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ V+ACNTA L + + P K AA T++ I ++ T AT++
Sbjct: 67 QEVKAIVVACNTASALALETISEEIDIPIIGVVKPGAKVAAQTTRNKKIGLIGTRATVKS 126
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
I + + + + VEE + + K+ K D
Sbjct: 127 DLYRKTIQAENPEIEVIGQPCPLFVPLVEEGWLKDSVTIEVAKR----YLAPLLEKDIDT 182
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ---TRVFDDHALF 251
++L CTHYPL+ + L V ++ + A+ + LL T + F
Sbjct: 183 LILGCTHYPLLRSTLKTLVGDGVTLVNPAYETAKELQRLLKEQGMENEIHTDEEFPYRFF 242
Query: 252 LSGKPDIAMRRL 263
+S + +
Sbjct: 243 VSDEEECFQEFA 254
>gi|25028959|ref|NP_739013.1| glutamate racemase [Corynebacterium efficiens YS-314]
gi|23494246|dbj|BAC19213.1| glutamate racemase [Corynebacterium efficiens YS-314]
Length = 316
Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats.
Identities = 57/259 (22%), Positives = 108/259 (41%), Gaps = 9/259 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + +P IY+ D PYG +++ + + + L
Sbjct: 53 DAPIGIFDSGVGGLTVARTIIDQLPHESIIYIGDTANGPYGPLPIARVREHALRIADE-L 111
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACNTA + R + +PA+++A A T++G + ++ T T+
Sbjct: 112 VERGCKMIVIACNTASAAFLRDARERYDVPVVEVILPAVRRAVAATRNGKVGVIGTVGTI 171
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+L + +H + VE + +I EG + +
Sbjct: 172 NSGAYQDLFAA-SPSIEVHAAACPRFVDFVERGITSGR----QILNIAEGYLEPLQAQGV 226
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT---RVFDDHA 249
D +VL CTHYPL+ V + V + +++ A+ +L + + ++
Sbjct: 227 DTLVLGCTHYPLLSGVIQLAMGDHVTLVSSAEETAKDVLRILSQNDLLADPTMHPTPTYS 286
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+G P++ + + G
Sbjct: 287 FESTGDPELFSQLSRRFLG 305
>gi|296268925|ref|YP_003651557.1| glutamate racemase [Thermobispora bispora DSM 43833]
gi|296091712|gb|ADG87664.1| glutamate racemase [Thermobispora bispora DSM 43833]
Length = 277
Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats.
Identities = 55/258 (21%), Positives = 106/258 (41%), Gaps = 7/258 (2%)
Query: 12 LQN-SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ + +I IFDSG+GGL V + + +P YVAD PYG +++ + +
Sbjct: 1 MNSGAIGIFDSGVGGLTVARAIIDQLPNESIFYVADTARQPYGPKPIAKVREYALEVMD- 59
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L +++ + VIACN+A + + R + PA+++A T++ + ++ T A
Sbjct: 60 HLVEHEVKMLVIACNSASAAVLRDARERYSVPVVEVIQPAVRRAVRVTKNRKVGVIGTRA 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + + + V++ +L VE E+ + I G
Sbjct: 120 TIESMAYHDAFAA-APDIELVAVAAPLLVEFVERGET----MSKELIEVIRGYLKPILDA 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D ++L CTHYPL+ ++ V + +++ A+ +L H
Sbjct: 175 GCDTLILGCTHYPLLTGAISYVAGDGVTLVSSAEETAKDVYRILHDRGMFNAEAEPFHRF 234
Query: 251 FLSGKPDIAMRRLMQGFG 268
+G + R + G
Sbjct: 235 RATGDTALFARLGRRFLG 252
>gi|251796096|ref|YP_003010827.1| glutamate racemase [Paenibacillus sp. JDR-2]
gi|247543722|gb|ACT00741.1| glutamate racemase [Paenibacillus sp. JDR-2]
Length = 271
Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 106/260 (40%), Gaps = 6/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+Q I I DSG+GGL V +++ +P +Y D PYG + + + +
Sbjct: 1 MFVQQPIAILDSGVGGLTVAREVMRQLPREKIVYFGDTARAPYGPRDPKIVTRFTREIVD 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L +++P + VIACNTA +E+R+ P + A T +G I ++ T
Sbjct: 61 -YLIQFRPKMIVIACNTATAFALEEIRAIVDIPVVGVIKPGARAALGRTITGCIGVIGTE 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + + H+ + + VE+ + + + I
Sbjct: 120 GTIKSGAYEHALLEISPDVHVISEACPLFVPLVEK----GNFRSLQTYETIRSSIGHLRK 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248
D ++L CTHYP + V +++ ++ + ++D AR +L + + H
Sbjct: 176 FPMDSLILGCTHYPFLADVIQEVVGPDINLISSADETAREVSDILQDQGMLSRGEILPVH 235
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
F SG+P + Q G
Sbjct: 236 QFFCSGEPQMFKSIAQQWLG 255
>gi|116052807|ref|YP_793124.1| glutamate racemase [Pseudomonas aeruginosa UCBPP-PA14]
gi|122257182|sp|Q02G12|MURI_PSEAB RecName: Full=Glutamate racemase
gi|115588028|gb|ABJ14043.1| glutamate racemase [Pseudomonas aeruginosa UCBPP-PA14]
Length = 265
Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats.
Identities = 67/256 (26%), Positives = 117/256 (45%), Gaps = 5/256 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ +FDSG+GGL VL+++R +P +YVAD+ PYG +++R D L
Sbjct: 5 SAAVGVFDSGVGGLSVLREIRARLPSESLLYVADNAHVPYGEKSAEYIRER-CERIGDFL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA ELR +P + + PA+K AAA T++G + +L+T TL
Sbjct: 64 LEQGAKALVLACNTATAAAAAELRERYPQVQLVAMEPAVKPAAAATRNGRVGVLATTGTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + S + L R+E + + + +E +
Sbjct: 124 KSARFAALLDRFASDVQVFTQPCPGLVERIE----AGDLYGPQTRALLERLLAPILEQGC 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP + + +L P + +D ++AR+ +L + +
Sbjct: 180 DTLILGCTHYPFVKPLLAELIPAEMAVIDTGAAVARQLERVLSARALLASGQAATPRFWT 239
Query: 253 SGKPDIAMRRLMQGFG 268
S P+ R L +G
Sbjct: 240 SALPEEMERILPILWG 255
>gi|318041257|ref|ZP_07973213.1| glutamate racemase [Synechococcus sp. CB0101]
Length = 272
Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats.
Identities = 68/255 (26%), Positives = 107/255 (41%), Gaps = 6/255 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL V +++ +P+ IY+AD PYG ++ + L
Sbjct: 5 PIGIFDSGLGGLSVWRQVVHHLPDESVIYLADQAHVPYGQRSAQEIQAYCSEIAGQ-LIA 63
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA + + LR FP + LG PA+K A T SG++ +++TPAT +
Sbjct: 64 MGCKAIVVACNTASAVALEPLRQAFPQLPILGLEPAVKPAVELTNSGVVGVMATPATFQG 123
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + + + LA VE + + D
Sbjct: 124 ELYRATVGRWAGDVQVVEQVCIGLADLVEIGELEG----ERCDALLRSFLNPMLEAGADT 179
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALFLS 253
IVL CTHYP ++ R+L + LD + ++AR +L + F S
Sbjct: 180 IVLGCTHYPFVIEAIRRLVGPGLAVLDPAPAVARHLGEVLTAQGLLNGSSAGRELRFFTS 239
Query: 254 GKPDIAMRRLMQGFG 268
+PD R + + G
Sbjct: 240 AQPDRFDRSVGRLVG 254
>gi|296118692|ref|ZP_06837268.1| glutamate racemase [Corynebacterium ammoniagenes DSM 20306]
gi|295968181|gb|EFG81430.1| glutamate racemase [Corynebacterium ammoniagenes DSM 20306]
Length = 265
Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats.
Identities = 63/264 (23%), Positives = 104/264 (39%), Gaps = 12/264 (4%)
Query: 12 LQN--SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ I IFDSG+GGL V + + +P+ IYV D PYG E ++ +
Sbjct: 1 MDRLAPIGIFDSGVGGLTVARTIMEQLPQESIIYVGDTAHAPYGPRELEDVQNLSRAIAD 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
D L + VIACNTA DE R + PA+++A A T++ + ++ T
Sbjct: 61 D-LVARGCKMLVIACNTATAAFLDEARQRYDIPVVEVIRPAVRRALATTRNHKVGVIGTE 119
Query: 130 ATLRRTYTSNLI----HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
T+ +L + H V+ VE + +I E
Sbjct: 120 GTINSQAYQHLFVQANDAETPNVEAHAVACPDFVPFVERGITSGR----QILGVAEAYLA 175
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+ D +VL CTHYPL+ + + V + +++ A+ +L +
Sbjct: 176 PLQAAGVDTLVLGCTHYPLLTGIIQLAMGDNVTLVSSAEETAKDVLRILTERDELAPVDN 235
Query: 246 DDHALF-LSGKPDIAMRRLMQGFG 268
+ LF +G P+ R + G
Sbjct: 236 EPTRLFESTGDPETFARLAQRFLG 259
>gi|298490221|ref|YP_003720398.1| glutamate racemase ['Nostoc azollae' 0708]
gi|298232139|gb|ADI63275.1| glutamate racemase ['Nostoc azollae' 0708]
Length = 284
Score = 246 bits (627), Expect = 4e-63, Method: Composition-based stats.
Identities = 58/263 (22%), Positives = 105/263 (39%), Gaps = 7/263 (2%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
++ Q +I +FDSG+GGL VL+++ +P IY D PYG + + +
Sbjct: 14 FSDQNSQPAIGVFDSGVGGLTVLRQIYKQLPNESIIYFGDTAHLPYGIRSQAEILQYVRE 73
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
+ + + + + ++ACNT+ L + +R F +P + A + I ++
Sbjct: 74 IL-KWMQQQRVKMVIMACNTSSALALENVRQEFDFPILGVVLPGARAAVQQGK--RIGVI 130
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+TPAT + I + VS +E+ +I + + +
Sbjct: 131 ATPATAKSNAYRQAIMEIQPDVQVWQVSCPEFVPLIEQN----RIHDPYTTEVAKSYLEP 186
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+ D +V CTHYP + V L P V +D S + L ++ TR+
Sbjct: 187 LIKQEIDTLVYGCTHYPHLAPVLGALLPSYVKLVDPSVHVVAACAQELDLLSIRNTRLPM 246
Query: 247 DHALFLSGKPDIAMRRLMQGFGL 269
+SG P + +Q G
Sbjct: 247 PTRFAVSGCPQQFAQSGLQWLGY 269
>gi|257869444|ref|ZP_05649097.1| glutamate racemase [Enterococcus gallinarum EG2]
gi|257803608|gb|EEV32430.1| glutamate racemase [Enterococcus gallinarum EG2]
Length = 270
Score = 246 bits (627), Expect = 4e-63, Method: Composition-based stats.
Identities = 51/261 (19%), Positives = 98/261 (37%), Gaps = 8/261 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ I DSG+GGL V+++ +P H IY+ D PYG + + +
Sbjct: 1 MTNKQPIGFIDSGVGGLTVVKEAIKQLPNEHIIYLGDTARCPYGPRPAEQVIEYTWQ-MT 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L + + VIACNTA + +E++ +P + A T++ I ++ T
Sbjct: 60 EFLLQQNIKMLVIACNTATAVALEEIKEKLSIPVIGVILPGSRAAVKATKNQQIGVIGTA 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ I + + ++ A VE + KK + +
Sbjct: 120 GTIKSNAYEEAIKLKSPRSVVVSLACPKFAPIVESNQAQSSV----AKKIVAETLRPLKN 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR---VFD 246
K+ D ++L CTHYPL+ + + + +D+ LL T
Sbjct: 176 KKLDTLILGCTHYPLLRSLIQNEMGSQIQLIDSGAETVGEVSMLLDYFAIANTSQMTQEP 235
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
++ + +G + +
Sbjct: 236 EYFFYTTGSTKLFDEIANEWL 256
>gi|67921667|ref|ZP_00515185.1| Glutamate racemase [Crocosphaera watsonii WH 8501]
gi|67856779|gb|EAM52020.1| Glutamate racemase [Crocosphaera watsonii WH 8501]
Length = 281
Score = 246 bits (627), Expect = 4e-63, Method: Composition-based stats.
Identities = 54/257 (21%), Positives = 102/257 (39%), Gaps = 7/257 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL VL+++ +P+ +Y AD PYG+ + + + + + +
Sbjct: 6 NSPIGVFDSGVGGLTVLRELYRQLPQESILYFADTARLPYGDRSAREILEFVREILAWM- 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + + ++ACNT+ L + +R F +P K A Q I ++STPAT
Sbjct: 65 TQQRVKMVIMACNTSSALAVEAVRQEFDLPILGVILPGAKAAVK--QGQRIGVISTPATA 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I + V +E+ ++ ++
Sbjct: 123 KSQAYRQAIQEINPNAQVWQVGCPPFVPLIEQNRLWDVHTKEVARE----YLTPLLAHNI 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +V CTHY + V + + P V +D + + + A+ L + +T +
Sbjct: 179 DTLVYGCTHYRHLEPVIKTIIPTTVKLVDPASYVVQAAKKELELMGLSKTAPALPTRFAV 238
Query: 253 SGKPDIAMRRLMQGFGL 269
SG + Q G
Sbjct: 239 SGCSSTFSQLSKQWLGY 255
>gi|254244446|ref|ZP_04937768.1| glutamate racemase [Pseudomonas aeruginosa 2192]
gi|126197824|gb|EAZ61887.1| glutamate racemase [Pseudomonas aeruginosa 2192]
Length = 265
Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats.
Identities = 66/256 (25%), Positives = 116/256 (45%), Gaps = 5/256 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ +FDSG+GG VL+++R +P +YVAD+ PYG +++R D L
Sbjct: 5 SAAVGVFDSGVGGFSVLREIRARLPSESLLYVADNAHVPYGEKSAEYIRER-CERIGDFL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA ELR +P + + PA+K AAA T++G + +L+T TL
Sbjct: 64 LEQGAKALVLACNTATAAAAAELRERYPQVPLVAMEPAVKPAAAATRNGRVGVLATTGTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + S + L R+E + + + +E +
Sbjct: 124 KSARFAALLDRFASDVQVFTQPCPGLVERIE----AGDLYGPQTRALLERLLAPILEQGC 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP + + +L P + +D ++AR+ +L + +
Sbjct: 180 DTLILGCTHYPFVKPLLAELIPAEMAVIDTGAAVARQLERVLSARALLASGQAATPRFWT 239
Query: 253 SGKPDIAMRRLMQGFG 268
S P+ R L +G
Sbjct: 240 SALPEEMERILPILWG 255
>gi|330685733|gb|EGG97369.1| glutamate racemase [Staphylococcus epidermidis VCU121]
Length = 265
Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats.
Identities = 54/261 (20%), Positives = 95/261 (36%), Gaps = 5/261 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ +
Sbjct: 1 MNRPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRSGEEVKQFTTEIAQK- 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L ++ + VIACNTA + + L+ P P + A T++ + IL T T
Sbjct: 60 LVEFDIKMLVIACNTATAVALEHLQKILPIPVIGVIEPGARTAIMTTKNQNVLILGTEGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ I ++ ++ VE+ + I +
Sbjct: 120 IKSEAYRKHIKRINPNVEVYGIACPGFVPLVEQMRYNDPTITSIV---IHQTLKQWRNSE 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D ++L CTHYPL+ + + AR LL N H + H
Sbjct: 177 ADTVILGCTHYPLLYKPINDYFGGKKTVISSGLETAREVSALLTFSNEHASYTQHPPHRF 236
Query: 251 FLSGKPDIAMRRLMQGFGLKS 271
F +G + + G+ +
Sbjct: 237 FATGDTMHIENIIKEWLGMDT 257
>gi|172041148|ref|YP_001800862.1| glutamate racemase [Corynebacterium urealyticum DSM 7109]
gi|171852452|emb|CAQ05428.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
Length = 288
Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats.
Identities = 59/263 (22%), Positives = 106/263 (40%), Gaps = 9/263 (3%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
E I IFDSG+GGL V + + L+P IY+ D PYG+ +++ +
Sbjct: 18 ESHNNAPIGIFDSGVGGLTVARTIVDLLPHESIIYIGDTANSPYGDKTIAQVREYAR-MV 76
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+D L + VIACNTA + R +P +PA+++A + +++ I ++ T
Sbjct: 77 ADELVARGVKMIVIACNTASAAFMRDARERYPIPVVEVILPAVRRAVSASRNNRIGLIGT 136
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ +L + + + VE + +I EG +
Sbjct: 137 QATVTSGAYQDLFAASPDVTAV-AQACPQFVPFVERGITSGR----QIHALAEGYLEPLK 191
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-- 246
D +VL CTHYPL+ V + + V +++++ A+ L +
Sbjct: 192 EAGVDTVVLGCTHYPLLTGVVQFVMGEDVTLVNSAEETAKMVYRTLAESGQLADNDPERQ 251
Query: 247 -DHALFLSGKPDIAMRRLMQGFG 268
+ +G P + + G
Sbjct: 252 ATLSFESTGDPHRFAQLAQRFLG 274
>gi|224476259|ref|YP_002633865.1| glutamate racemase [Staphylococcus carnosus subsp. carnosus TM300]
gi|254766124|sp|B9DPT7|MURI_STACT RecName: Full=Glutamate racemase
gi|222420866|emb|CAL27680.1| putative glutamate racemase [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 266
Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats.
Identities = 57/257 (22%), Positives = 97/257 (37%), Gaps = 5/257 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG E ++K + L
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIIRQLPNETIYYLGDSARCPYGPREGDEVRKFTVQLAQK- 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L ++ + VIACNTA + D L+ P P + A T++ + +L T T
Sbjct: 60 LMEFDIKMLVIACNTATAVALDTLKELLPIPVIGVIEPGSRTAIMTTKNNNVMVLGTEGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + I + + V+ VE+ + + + I +
Sbjct: 120 IKSEAYTKHIKAINPHVDVTGVACPDFVPLVEQMRYHDPVPTNIV---IHQTLKNYRTNK 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D ++L CTHYPL+ + + AR LL N H H
Sbjct: 177 ADTVILGCTHYPLLFEPLHDYFGGSKTVISSGLETAREVSALLTFSNEHAPYTPNTKHRF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
F +G + + Q
Sbjct: 237 FATGDTEHIEYIISQWL 253
>gi|167747288|ref|ZP_02419415.1| hypothetical protein ANACAC_02002 [Anaerostipes caccae DSM 14662]
gi|167653266|gb|EDR97395.1| hypothetical protein ANACAC_02002 [Anaerostipes caccae DSM 14662]
Length = 272
Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats.
Identities = 58/256 (22%), Positives = 101/256 (39%), Gaps = 6/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL V +++ +P+ IY D PYG + + + + +L
Sbjct: 7 NAPIGVFDSGVGGLTVAREIMRQLPDESLIYFGDTARVPYGTKSKDTVIRYSRQIVNFLL 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K VIACNTA L +L+ + P AA T++ I I+ T AT+
Sbjct: 67 SK-NVKAIVIACNTASALAMHKLQQEYIVPMIGMVRPGAIAAARATKNHHIGIIGTNATV 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + + + VEE +I ED + E + +
Sbjct: 126 KSGQYGKYLRELNPDVTVVTKACPLFVPLVEEGLIDDRITED----MVSRYLREFDQYQI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALF 251
D ++L CTHYPL+ + + V ++ + A+ R LL ++ +
Sbjct: 182 DSLILGCTHYPLLQNPIKNFVGDNVTLINPAYETAKSLRELLKEREMEAESGHTAEYHYY 241
Query: 252 LSGKPDIAMRRLMQGF 267
+S D + +
Sbjct: 242 VSDMEDQFLSFADRVL 257
>gi|153009326|ref|YP_001370541.1| glutamate racemase [Ochrobactrum anthropi ATCC 49188]
gi|166231047|sp|A6X0F8|MURI_OCHA4 RecName: Full=Glutamate racemase
gi|151561214|gb|ABS14712.1| glutamate racemase [Ochrobactrum anthropi ATCC 49188]
Length = 278
Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats.
Identities = 140/276 (50%), Positives = 191/276 (69%), Gaps = 8/276 (2%)
Query: 3 IDNYPCEK-------KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNW 55
+ N P + IL+FDSGIGGL VL++ R LMP+ F+YVADD GFPYG W
Sbjct: 1 MKNAPAVSFSAMPSADAERPILVFDSGIGGLTVLREARVLMPDRRFVYVADDAGFPYGGW 60
Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA 115
E+ AL++R++ LF ++ Y P ++VIACNTA TL+ D+LR +PS+ F+G VPAIK AA
Sbjct: 61 EEDALRERIVELFGKLIAAYDPEIAVIACNTASTLVLDDLRQAYPSVPFVGTVPAIKPAA 120
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
T SGL+S+L+TP T+RR YT +LI S+ +QCH+ LV + LA+ E + G +I E
Sbjct: 121 ERTSSGLVSVLATPGTVRRAYTRDLIQSFATQCHVRLVGADQLATVAEAHIRGERIDEAL 180
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL- 234
+ ++I CFIE++G RTD++VLACTHYP + +VFR+L+PWPVDWLD +++IARR LL
Sbjct: 181 VVEQIAPCFIEQDGNRTDIVVLACTHYPFLANVFRRLAPWPVDWLDPAEAIARRTVSLLK 240
Query: 235 PRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFGLK 270
PR + +D A+ S PD A+RRLMQGFGL
Sbjct: 241 PRRADEELHHHNDLAVVTSRNPDYAIRRLMQGFGLH 276
>gi|253580902|ref|ZP_04858164.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251847744|gb|EES75712.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 273
Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats.
Identities = 55/254 (21%), Positives = 98/254 (38%), Gaps = 8/254 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL V +++ +P +Y D PYG+ + + + L
Sbjct: 6 EAPIGVFDSGVGGLTVAREIMRNLPSEKIVYFGDTARVPYGSKSKETIIRYSRQII-RFL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ Q V+ACNTA D +R F P K AAA T++ + I+ T T+
Sbjct: 65 QQQQVKAIVVACNTASAFALDAVRDEFDIPIIGVIEPGAKVAAAQTRNKRVGIIGTVGTV 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + + + + VEE + ++ E + K+
Sbjct: 125 GSGIHAEYLKHLDPEITVFGKACPLFVPLVEEGWLHDPVTDEV----AARYLKELQDKQV 180
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD---HA 249
D ++L CTHYPL+ R++ V ++ + A LL + +
Sbjct: 181 DTLILGCTHYPLLRSTIRKIMGDGVCLVNPAYETALELGRLLEEKGLAGEGTEKNEFPYR 240
Query: 250 LFLSGKPDIAMRRL 263
++S D
Sbjct: 241 FYVSDLADEFKAFA 254
>gi|119490901|ref|ZP_01623184.1| glutamate racemase [Lyngbya sp. PCC 8106]
gi|119453719|gb|EAW34878.1| glutamate racemase [Lyngbya sp. PCC 8106]
Length = 284
Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 100/256 (39%), Gaps = 7/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GGL VL+++ +P +Y D PYG + + + + +
Sbjct: 8 RKIAVFDSGVGGLTVLRELYQQLPNESILYFGDTARLPYGTRSQSEILQFVREIIIWAI- 66
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ V+ACNT+ L + ++S F +P K A + I +++TPAT+
Sbjct: 67 DQDVKMIVMACNTSSALALETVQSEFNVPILGVILPGAKAAVQ--KGRRIGVIATPATVT 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I + + VS +E+ +I + + + +R D
Sbjct: 125 SNAYRQAIQEMDATVQVWQVSCPEFVPLIEQN----RIHDPYTYQVAQEYLAPLLDQRID 180
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++ CTHYP + V R L P V +D + + + L + + +S
Sbjct: 181 TLIYGCTHYPHLAPVLRSLLPPSVQLVDPAVHLVKAITQELELLGLQNPNLPRPTRFCVS 240
Query: 254 GKPDIAMRRLMQGFGL 269
G P +Q G
Sbjct: 241 GCPQQFASVSVQWLGY 256
>gi|15965542|ref|NP_385895.1| glutamate racemase [Sinorhizobium meliloti 1021]
gi|307302662|ref|ZP_07582418.1| glutamate racemase [Sinorhizobium meliloti BL225C]
gi|307318509|ref|ZP_07597943.1| glutamate racemase [Sinorhizobium meliloti AK83]
gi|20177981|sp|Q92PG8|MURI_RHIME RecName: Full=Glutamate racemase
gi|15074723|emb|CAC46368.1| Probable glutamate racemase [Sinorhizobium meliloti 1021]
gi|306895849|gb|EFN26601.1| glutamate racemase [Sinorhizobium meliloti AK83]
gi|306903026|gb|EFN33617.1| glutamate racemase [Sinorhizobium meliloti BL225C]
Length = 277
Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats.
Identities = 147/257 (57%), Positives = 192/257 (74%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
IL+FDSGIGGL VL++ R LMPE HFIYVADD GFPYG WE+ ALK+R++ LF +L
Sbjct: 7 KPILVFDSGIGGLTVLREARVLMPERHFIYVADDAGFPYGGWEEGALKERVIALFGRLLA 66
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ P + +IACNTAFTL+ +LR+ +P M F+G VPAIK AA T+SGL+S+L+TP T++
Sbjct: 67 ELDPEICIIACNTAFTLVGADLRAAYPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 126
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI S+ SQCH+ LV S LA E Y G + ++ + EIE CF+E EGKRTD
Sbjct: 127 RAYTRDLIQSFASQCHVRLVGSENLARMAEAYIRGDALADEAVLAEIEPCFVEAEGKRTD 186
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++VLACTHYP + +VFR+L+PWPVDWLD +++IARRAR L+P N + +D A+F S
Sbjct: 187 IVVLACTHYPFMSNVFRRLAPWPVDWLDPAEAIARRARSLVPLPNGFEPLNGEDPAIFTS 246
Query: 254 GKPDIAMRRLMQGFGLK 270
G+PD A RRLMQGFGL+
Sbjct: 247 GRPDFATRRLMQGFGLR 263
>gi|312792765|ref|YP_004025688.1| glutamate racemase [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312179905|gb|ADQ40075.1| glutamate racemase [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 267
Score = 245 bits (626), Expect = 5e-63, Method: Composition-based stats.
Identities = 56/255 (21%), Positives = 94/255 (36%), Gaps = 7/255 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL V +++ LMP +Y D PYG+ + K M + L
Sbjct: 4 RPIGIFDSGLGGLTVFKEIVSLMPNESIVYFGDTARIPYGSKSKETVTKFAMQN-TRFLL 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ V+ACNTA + L++ F P + A T++ I ++ T T+
Sbjct: 63 SKNVKIVVVACNTASAYAYEALKAKFDIPIVAVIEPGAEAAVRATKNKRIGVIGTEGTIA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I S + + VE ++ + E K D
Sbjct: 123 SGAFEKKILELDSSLQVFSKPCPLFVPLVE----EGWTDKEVTYLVAKEYLEEFNEKEID 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHALFL 252
+VL CTHYP + V +++ P V ++ + A++ LL + + + +
Sbjct: 179 TLVLGCTHYPFLQDVIKKVLPD-VMLINPALETAKQVFELLKENDMLNSSSEEPTYYFYA 237
Query: 253 SGKPDIAMRRLMQGF 267
S
Sbjct: 238 SDNLKKFESVASIFL 252
>gi|126656938|ref|ZP_01728116.1| glutamate racemase [Cyanothece sp. CCY0110]
gi|126621776|gb|EAZ92485.1| glutamate racemase [Cyanothece sp. CCY0110]
Length = 281
Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats.
Identities = 54/257 (21%), Positives = 101/257 (39%), Gaps = 7/257 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL VL+++ +P+ +Y AD PYGN E + + + + + +
Sbjct: 6 NSPIGVFDSGVGGLTVLRELYRQLPQESILYFADTARLPYGNREASEILQFVREILAWM- 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ ++ACNT+ L + +R F +P K A + I ++STPAT
Sbjct: 65 TGQNVKMVIMACNTSSALALEAVRQEFDLPILGVILPGAKAAVKQGK--RIGVISTPATA 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I + + V +E+ K+ +
Sbjct: 123 KSQAYRQAIQEINPEAQVWQVGCPQFVPLIEQNRIWDVYT----KQVAQEYLSPLLAHDI 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +V CTHY + + + + P + +D + + + A+ L + + +
Sbjct: 179 DTLVYGCTHYRHLEALIKTIIPGTIKLIDPASYVVQAAKKELELMGLSKISPASPTRFAV 238
Query: 253 SGKPDIAMRRLMQGFGL 269
SG + R Q G
Sbjct: 239 SGCSESFSRLSQQWLGY 255
>gi|320547382|ref|ZP_08041671.1| glutamate racemase [Streptococcus equinus ATCC 9812]
gi|320447978|gb|EFW88732.1| glutamate racemase [Streptococcus equinus ATCC 9812]
Length = 269
Score = 245 bits (625), Expect = 5e-63, Method: Composition-based stats.
Identities = 58/257 (22%), Positives = 100/257 (38%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V+ ++ +P +Y+ D PYG +++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVHELMRQLPHEEIVYIGDSARAPYGPRPAEQIREYTWELVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + V ACNTA + E++ +P A T++G I ++ TP T+
Sbjct: 63 TK-NVKMIVFACNTATAVAWKEVKEKLDIPVLGVILPGSSAAIKSTRNGKIGVIGTPMTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I S + + ++ VE + KK + GK
Sbjct: 122 NSEVYPEKIKSLSPKMEVSGLACPKFVPIVESNE----MTSSVAKKVVYESLAPLVGK-V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--RINTHQTRVFDDHAL 250
D +VL CTHYPL+ + + + V +D+ R LL IN ++T +H
Sbjct: 177 DTLVLGCTHYPLLRPIIQNVMGPDVKLIDSGAECIRDVSVLLNYFEINHNRTEDVTNHHF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
+ + + +
Sbjct: 237 YTTASSQSFKKIAVNWL 253
>gi|260584033|ref|ZP_05851781.1| glutamate racemase [Granulicatella elegans ATCC 700633]
gi|260158659|gb|EEW93727.1| glutamate racemase [Granulicatella elegans ATCC 700633]
Length = 480
Score = 245 bits (625), Expect = 6e-63, Method: Composition-based stats.
Identities = 62/260 (23%), Positives = 98/260 (37%), Gaps = 8/260 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ +I DSG+GGL VL++ +P I++ D PYGN ++K +
Sbjct: 3 NMSKAIGFIDSGVGGLTVLKEALKQLPHESMIFLGDSARCPYGNRTVEEIRKFTKEMV-Q 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L K + VIACNTA +I +EL+ T P A T+S I++L T A
Sbjct: 62 FLLKKDVKMIVIACNTATAVILEELQETLDIPVVGVIQPGSLAAIKQTKSQKIAVLGTHA 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ I Q + + VE KK + GK
Sbjct: 122 TIQSDVYRKTIQKKNHQLMVTSLECPKFVPLVESNQT----DSPIAKKVVAQTLQPLMGK 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT---HQTRVFDD 247
D ++L CTHYPL+ + + V +D+ LL ++T
Sbjct: 178 EFDTLILGCTHYPLLKQRIQAVVGPQVTLIDSGAETVSTVSALLDFNYLAENYETNPSPT 237
Query: 248 HALFLSGKPDIAMRRLMQGF 267
++ +G P +
Sbjct: 238 LEIYTTGSPILFKEIAENWL 257
>gi|312126950|ref|YP_003991824.1| glutamate racemase [Caldicellulosiruptor hydrothermalis 108]
gi|311776969|gb|ADQ06455.1| glutamate racemase [Caldicellulosiruptor hydrothermalis 108]
Length = 267
Score = 245 bits (625), Expect = 6e-63, Method: Composition-based stats.
Identities = 55/255 (21%), Positives = 95/255 (37%), Gaps = 7/255 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL V +++ LMP +Y D PYG+ + K M + L
Sbjct: 4 RPIGIFDSGLGGLTVFKEIVSLMPNESIVYFGDTARIPYGSKSKETVTKFAMQN-TRFLL 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ V+ACNTA + L++ F P + A T++ I ++ T T+
Sbjct: 63 SKNVKIVVVACNTASAYAYEALKAKFDIPIVAVIEPGAEAAVRATKNKKIGVIGTEGTVA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I S + + VE ++ + E K D
Sbjct: 123 SGAFKKKILELDSSIKVFSKPCPLFVPLVE----EGWTDKEVTYLVAKEYLEEFNEKEID 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHALFL 252
+VL CTHYP + V +++ P V ++ + A++ +L + + + + +
Sbjct: 179 TLVLGCTHYPFLQDVIKKVLPD-VMLINPALETAKQVFEVLKENDMLNNSSEEPTYYFYA 237
Query: 253 SGKPDIAMRRLMQGF 267
S
Sbjct: 238 SDNLKKFESVASIFL 252
>gi|255657512|ref|ZP_05402921.1| glutamate racemase [Clostridium difficile QCD-23m63]
gi|296452816|ref|ZP_06894503.1| glutamate racemase [Clostridium difficile NAP08]
gi|296879932|ref|ZP_06903904.1| glutamate racemase [Clostridium difficile NAP07]
gi|296258364|gb|EFH05272.1| glutamate racemase [Clostridium difficile NAP08]
gi|296429046|gb|EFH14921.1| glutamate racemase [Clostridium difficile NAP07]
Length = 268
Score = 245 bits (625), Expect = 6e-63, Method: Composition-based stats.
Identities = 54/256 (21%), Positives = 98/256 (38%), Gaps = 6/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL VL+++ ++P IY D PYG+ + K + L
Sbjct: 3 NKPIGVFDSGLGGLTVLKEIMKILPNEDIIYFGDTARIPYGSRSKETIIKYTFQAIN-FL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
VIACNTA E + + + A + T++ ++ I+ T T+
Sbjct: 62 KTKGVKAIVIACNTATARSLKEAQEKYDIPIIGVIEAGARTAVSSTKNKIVGIIGTEGTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I I + + VEE + K + E + K
Sbjct: 122 SSKAYNLEISKIDESIEIVNKACPLFVPIVEEGWAN----TEVAKLTAKIYLQELKEKNI 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHALF 251
D +VL CTHYP++ + + ++ + A+ + +L N + T + + +
Sbjct: 178 DSLVLGCTHYPILKRTIGEEVGEHIKLVNPAKETAKDLKKVLEVKNIINNTEIHGTYQYY 237
Query: 252 LSGKPDIAMRRLMQGF 267
+S P+ +
Sbjct: 238 VSDIPEKFTDIAREFL 253
>gi|271963270|ref|YP_003337466.1| glutamate racemase [Streptosporangium roseum DSM 43021]
gi|270506445|gb|ACZ84723.1| Glutamate racemase [Streptosporangium roseum DSM 43021]
Length = 276
Score = 245 bits (625), Expect = 6e-63, Method: Composition-based stats.
Identities = 58/256 (22%), Positives = 103/256 (40%), Gaps = 6/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q SI IFDSG+GGL V + + +P YVAD PYG ++ + + L
Sbjct: 6 QASIGIFDSGVGGLTVARAIIDQLPNESIFYVADTARQPYGPKSIAQVRAYALEVMD-HL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + VIACN+A + + R + PA ++A T++G + ++ T AT+
Sbjct: 65 VEHDVKMLVIACNSASAAVLRDARERYDVPVVEVIQPAARRAVQATRNGRVGVIGTRATI 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + V++ L VE +E+ + I G
Sbjct: 125 ESMAYHDAFAA-APDVMLTGVAAPRLVEFVERGET----MSEELIEVIRGYMGPVLRDGC 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYPL+ ++ V + ++D A+ +L H
Sbjct: 180 DTLILGCTHYPLLTAPISYVAGDGVTLVSSADETAKDVYRILHDRGLAAAGGTPRHRFGA 239
Query: 253 SGKPDIAMRRLMQGFG 268
+G + + + G
Sbjct: 240 TGDTVLFEQLGRRFLG 255
>gi|126701188|ref|YP_001090085.1| glutamate racemase [Clostridium difficile 630]
gi|254977188|ref|ZP_05273660.1| glutamate racemase [Clostridium difficile QCD-66c26]
gi|255094517|ref|ZP_05323995.1| glutamate racemase [Clostridium difficile CIP 107932]
gi|255102774|ref|ZP_05331751.1| glutamate racemase [Clostridium difficile QCD-63q42]
gi|255308595|ref|ZP_05352766.1| glutamate racemase [Clostridium difficile ATCC 43255]
gi|255316269|ref|ZP_05357852.1| glutamate racemase [Clostridium difficile QCD-76w55]
gi|255518930|ref|ZP_05386606.1| glutamate racemase [Clostridium difficile QCD-97b34]
gi|255652109|ref|ZP_05399011.1| glutamate racemase [Clostridium difficile QCD-37x79]
gi|260685082|ref|YP_003216367.1| glutamate racemase [Clostridium difficile CD196]
gi|260688740|ref|YP_003219874.1| glutamate racemase [Clostridium difficile R20291]
gi|306521843|ref|ZP_07408190.1| glutamate racemase [Clostridium difficile QCD-32g58]
gi|115252625|emb|CAJ70468.1| Glutamate racemase [Clostridium difficile]
gi|260211245|emb|CBA66775.1| glutamate racemase [Clostridium difficile CD196]
gi|260214757|emb|CBE07455.1| glutamate racemase [Clostridium difficile R20291]
Length = 268
Score = 245 bits (625), Expect = 6e-63, Method: Composition-based stats.
Identities = 54/257 (21%), Positives = 98/257 (38%), Gaps = 6/257 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I +FDSG+GGL VL+++ ++P IY D PYG+ + K +
Sbjct: 2 NNKPIGVFDSGLGGLTVLKEIMKILPNEDIIYFGDTARIPYGSRSKETIIKYTFQAIN-F 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L VIACNTA E + + + A + T++ ++ I+ T T
Sbjct: 61 LKTKGVKAIVIACNTATARSLKEAQEKYDIPIIGVIEAGARTAVSSTKNKIVGIIGTEGT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + I I + + VEE + K + E + K
Sbjct: 121 ISSKAYNLEISKIDESIEIVNKACPLFVPIVEEGWAN----TEVAKLTAKIYLQELKEKN 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHAL 250
D +VL CTHYP++ + + ++ + A+ + +L N + T + +
Sbjct: 177 IDSLVLGCTHYPILKRTIGEEVGEHIKLVNPAKETAKDLKKILEVQNIINNTEIHGTYQY 236
Query: 251 FLSGKPDIAMRRLMQGF 267
++S P+ +
Sbjct: 237 YVSDIPEKFSDIAREFL 253
>gi|312621720|ref|YP_004023333.1| glutamate racemase [Caldicellulosiruptor kronotskyensis 2002]
gi|312202187|gb|ADQ45514.1| glutamate racemase [Caldicellulosiruptor kronotskyensis 2002]
Length = 267
Score = 245 bits (625), Expect = 6e-63, Method: Composition-based stats.
Identities = 56/255 (21%), Positives = 95/255 (37%), Gaps = 7/255 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL V +++ LMP +Y D PYG+ + K M + L
Sbjct: 4 RPIGIFDSGLGGLTVFKEIVSLMPNESIVYFGDTARIPYGSKSKETVTKFAMQN-TRFLL 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ V+ACNTA + L++ F P + A T++ I ++ T T+
Sbjct: 63 SKNVKIVVVACNTASAYAYEALKAKFDVPIVAVIEPGAEAAVKATKNKRIGVIGTEGTIS 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I + + + VE ++ + E K D
Sbjct: 123 SGAFEKKILELDNSIKVFSKPCPLFVPLVE----EGWTDKEVTYLIAKEYLEEFNEKAID 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHALFL 252
+VL CTHYP + V R++ P V ++ + A++ LL + + + + +
Sbjct: 179 TLVLGCTHYPFLQDVIRKVLP-NVMLINPALETAKQVFELLKMNDMLNNSSEEPTYYFYA 237
Query: 253 SGKPDIAMRRLMQGF 267
S
Sbjct: 238 SDNLKKFESVASIFL 252
>gi|1709184|sp|P52972|MURI_BACSH RecName: Full=Glutamate racemase
gi|849141|gb|AAA68029.1| glutamate racemase [Lysinibacillus sphaericus]
Length = 265
Score = 245 bits (625), Expect = 6e-63, Method: Composition-based stats.
Identities = 52/257 (20%), Positives = 95/257 (36%), Gaps = 6/257 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG ++ +
Sbjct: 1 MNAPIGVIDSGVGGLTVAKEIIKRLPNETIYYIGDTARCPYGPRTRQEVRNFTWQ-MAKA 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+K + VIACNTA + + L+ P + A T+ + +L+T T
Sbjct: 60 LEKMNIKMLVIACNTATAVALESLQRNMPFPVLGVINRGARAAVKKTKRHEVVVLATEGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + S + HI ++ VE + I + ++
Sbjct: 120 IKSGAYEEALLSLNTSTHIIPLACPTFVPLVESGEYKGQF----ANNLIAEGLKPLKNEQ 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHAL 250
D ++L CTHYP++ + V L +++ A+ +L T T H
Sbjct: 176 FDTVILGCTHYPILQKQIEAVVGEDVFVLSSAEETAKDVEEMLAYNGTLADTNAKPAHKF 235
Query: 251 FLSGKPDIAMRRLMQGF 267
+ +G I
Sbjct: 236 YATGSVPIFRSIAENWL 252
>gi|117928893|ref|YP_873444.1| glutamate racemase [Acidothermus cellulolyticus 11B]
gi|166231023|sp|A0LVJ8|MURI_ACIC1 RecName: Full=Glutamate racemase
gi|117649356|gb|ABK53458.1| glutamate racemase [Acidothermus cellulolyticus 11B]
Length = 263
Score = 244 bits (624), Expect = 7e-63, Method: Composition-based stats.
Identities = 57/258 (22%), Positives = 104/258 (40%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL V + + L+P YVAD FPYG +++ + + ++
Sbjct: 3 NLPIGVFDSGVGGLTVARAILDLLPHEPLYYVADTAHFPYGTKSIAEVRQYGLAVLDRMV 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
L VIACN+A + + + R + PA+++A + T++G + ++ TPAT+
Sbjct: 63 AD-GVKLLVIACNSASSALLRDARERYDVPVVEVIQPAVRKAVSATRNGKVGVIGTPATI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + + VE DE+ + + +
Sbjct: 122 ASMAYDDAFAA-APHVDLTTAACPRFVEFVEAGIT----MSDELLECAKEYLAPIVERGC 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT--HQTRVFDDHAL 250
D ++L CTHYP + + V + ++D AR +L + H
Sbjct: 177 DTLILGCTHYPFLAGAIALVVGDEVMLVSSADETARDVYRVLVSRGLTRPASAPPPVHRF 236
Query: 251 FLSGKPDIAMRRLMQGFG 268
+G P+ R + G
Sbjct: 237 AATGDPEPFSRLGRRFLG 254
>gi|295397445|ref|ZP_06807532.1| glutamate racemase [Aerococcus viridans ATCC 11563]
gi|294974346|gb|EFG50086.1| glutamate racemase [Aerococcus viridans ATCC 11563]
Length = 287
Score = 244 bits (624), Expect = 7e-63, Method: Composition-based stats.
Identities = 57/262 (21%), Positives = 96/262 (36%), Gaps = 8/262 (3%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
E + I DSG+GGL V+++ +P IY+ D+ PYG + +
Sbjct: 7 EVNMNRPIGFLDSGVGGLTVVKEAMRQLPNESIIYIGDNARCPYGPRSVEEIAAFTNQMV 66
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+L K L VIACNTA + DE++ P + A YT++G I +L T
Sbjct: 67 DFLLTK-DIKLLVIACNTATAVALDEIKQRVSIPVIGVIQPGARAANKYTKNGKIGVLGT 125
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ + + ++ VE + KK I +
Sbjct: 126 EGTIKSGMYLENLLQKNKDLNTTSLACPAFVPLVE----SQQYATPLAKKVIAETLAPIK 181
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD- 247
K D ++L CTHYPL+ ++ V +D+ LL + +
Sbjct: 182 NKGLDTVILGCTHYPLLRDTIQKTLGHTVKLIDSGQETISDVSILLDYNDIAKLSNDPSP 241
Query: 248 --HALFLSGKPDIAMRRLMQGF 267
+ +G P++
Sbjct: 242 RMTEFYTTGSPELFKEIADDWL 263
>gi|125718584|ref|YP_001035717.1| glutamate racemase [Streptococcus sanguinis SK36]
gi|166231063|sp|A3CPR2|MURI_STRSV RecName: Full=Glutamate racemase
gi|125498501|gb|ABN45167.1| Glutamate racemase, putative [Streptococcus sanguinis SK36]
Length = 264
Score = 244 bits (624), Expect = 7e-63, Method: Composition-based stats.
Identities = 55/257 (21%), Positives = 99/257 (38%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P IY+ D PYG ++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIRAYTWQLVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNTA ++ +E++ +P A T SG I ++ TP T+
Sbjct: 63 TK-DVKMIVIACNTATAVVWEEVKEKLDIPVLGVILPGASAAIKSTASGRIGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + + + ++ VE + + + + ++ R
Sbjct: 122 SSDIYRQKIEALSPEMQVESLACPKFVPLVESNELHSSLTKKVVYETLQP-----LAGRV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHAL 250
D +VL CTHYPL+ + + V +D+ R LL +++R +H
Sbjct: 177 DTLVLGCTHYPLLRPIIQNRMGPDVKLIDSGAECVRDISVLLNYFEINRSREKQELNHQF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
+ +
Sbjct: 237 YTTANAKSFSEIAESWL 253
>gi|310641323|ref|YP_003946081.1| glutamate racemase [Paenibacillus polymyxa SC2]
gi|309246273|gb|ADO55840.1| Glutamate racemase [Paenibacillus polymyxa SC2]
Length = 269
Score = 244 bits (624), Expect = 7e-63, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 102/258 (39%), Gaps = 6/258 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+Q +I I DSG+GGL V++++ +P IY D PYG +KK +
Sbjct: 1 MQQAIAILDSGVGGLTVVKEVMRQLPREKIIYFGDTARTPYGPRPSEEVKKFTEQMVD-F 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L ++ P + +IACNTA + + P + A + T +G + ++ T T
Sbjct: 60 LIQFNPKVIIIACNTATAAALEYISQKVSIPVIGVIHPGARAAISATATGYVGVIGTVGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R + + + + L VE+ K + E +
Sbjct: 120 IRSGAYTTALKQLSPYVDVVSHACPALVPLVEQGLFRSKTTSQVV----EESLRPIQTYP 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHAL 250
D ++L CTHYP + +++ V + ++D AR +L H L
Sbjct: 176 IDCLILGCTHYPFLRETIQEVMGPAVKLISSADETARETSTILYNKGKLEAGDETPVHQL 235
Query: 251 FLSGKPDIAMRRLMQGFG 268
F SG P++ R Q G
Sbjct: 236 FCSGDPELFQRIAAQWLG 253
>gi|254238598|ref|ZP_04931921.1| glutamate racemase [Pseudomonas aeruginosa C3719]
gi|126170529|gb|EAZ56040.1| glutamate racemase [Pseudomonas aeruginosa C3719]
Length = 265
Score = 244 bits (624), Expect = 7e-63, Method: Composition-based stats.
Identities = 66/256 (25%), Positives = 116/256 (45%), Gaps = 5/256 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ +FDSG+GGL VL+++R +P +YVAD+ PYG +++R D L
Sbjct: 5 SAAVGVFDSGVGGLSVLREIRARLPSESLLYVADNAHVPYGEKSAEYIRER-CERIGDFL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA ELR +P + + PA+K AAA T++G + +L+T TL
Sbjct: 64 LEQGAKALVLACNTATAAAAAELRERYPQVPLVAMEPAVKPAAAATRNGRVGVLATTGTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + S + L R+E + + + +E +
Sbjct: 124 KSARFAALLDRFASDVQVFTQPCPGLVERIE----AGDLYGPQTRALLERLLAPILEQGC 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP + + +L P + +D ++AR+ +L + +
Sbjct: 180 DTLILGCTHYPFVKPLLAELIPAEMAVIDTGAAVARQLERVLSARALLASGQAATPRFWT 239
Query: 253 SGKPDIAMRRLMQGFG 268
S + R L +G
Sbjct: 240 SALQEEMERILPILWG 255
>gi|306824554|ref|ZP_07457900.1| glutamate racemase [Streptococcus sp. oral taxon 071 str. 73H25AP]
gi|315611776|ref|ZP_07886698.1| glutamate racemase [Streptococcus sanguinis ATCC 49296]
gi|322375928|ref|ZP_08050439.1| glutamate racemase [Streptococcus sp. C300]
gi|331265743|ref|YP_004325373.1| glutamate racemase [Streptococcus oralis Uo5]
gi|304433341|gb|EFM36311.1| glutamate racemase [Streptococcus sp. oral taxon 071 str. 73H25AP]
gi|315316191|gb|EFU64221.1| glutamate racemase [Streptococcus sanguinis ATCC 49296]
gi|321279196|gb|EFX56238.1| glutamate racemase [Streptococcus sp. C300]
gi|326682415|emb|CBZ00032.1| glutamate racemase [Streptococcus oralis Uo5]
Length = 264
Score = 244 bits (624), Expect = 8e-63, Method: Composition-based stats.
Identities = 54/257 (21%), Positives = 104/257 (40%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P +Y+ D PYG +++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIREYTWQLVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNTA ++ +E+++ +P A +Q G I ++ TP T+
Sbjct: 63 TK-DVKMIVIACNTATAVVWEEIKAQLDIPVLGVILPGASAAIKSSQGGKIGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IH + ++ A VE A + + + + + +
Sbjct: 122 QSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLRPLVGK-----V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHAL 250
D ++L CTHYPL+ + + + V +D+ R LL +++R H
Sbjct: 177 DSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINRSRDAGPLQHRF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
+ + + +
Sbjct: 237 YTTANSQSFAQIGAEWL 253
>gi|158317397|ref|YP_001509905.1| glutamate racemase [Frankia sp. EAN1pec]
gi|229486274|sp|A8L764|MURI_FRASN RecName: Full=Glutamate racemase
gi|158112802|gb|ABW14999.1| glutamate racemase [Frankia sp. EAN1pec]
Length = 276
Score = 244 bits (624), Expect = 8e-63, Method: Composition-based stats.
Identities = 57/256 (22%), Positives = 101/256 (39%), Gaps = 8/256 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GGL V + + +P +Y+ D PYG +++ + + L
Sbjct: 5 PIGVFDSGVGGLTVARAILDQLPGESLLYIGDTAHAPYGPRPIAEVRRYALAALDE-LVS 63
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L VIACN+A + R + VPA ++A A T+SG + ++ T AT+
Sbjct: 64 AGVKLLVIACNSASAACLRDARERYDVPVVEVIVPATRRAVAATRSGRVGVIGTVATITS 123
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + + + V+ VE + ++ E + D
Sbjct: 124 RAYEDA-FAAAAGTELVSVACPAFVDFVERGITSGR----QLLGLTEAYLAPLQEADVDT 178
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFDDHALFL 252
++L CTHYPL+ V + V + +++ A+ +L R + H
Sbjct: 179 VILGCTHYPLLTGVIGLVMGEGVTLVSSAEETAKDTYRVLARDGLFRDPDLPPPAHRFLT 238
Query: 253 SGKPDIAMRRLMQGFG 268
+G P R + G
Sbjct: 239 TGDPAAFARVGRRFLG 254
>gi|315223134|ref|ZP_07865002.1| glutamate racemase [Streptococcus anginosus F0211]
gi|315187823|gb|EFU21570.1| glutamate racemase [Streptococcus anginosus F0211]
Length = 264
Score = 244 bits (624), Expect = 8e-63, Method: Composition-based stats.
Identities = 60/257 (23%), Positives = 98/257 (38%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P IY+ D PYG +++ L L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAEQIREYTWQLV-QFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA ++ +E++ +P A +Q G I I+ TP T+
Sbjct: 62 LTKNVKMIVLACNTATAVVWEEIKEKLDIPVLGVILPGASAAIKASQHGTIGIIGTPMTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I + + + +S VE I KK + + +GK
Sbjct: 122 QSDIYRQKIERLLPEVEVTSLSCPKFVPLVESNELSSSIT----KKVVYESLMPLKGK-V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--RINTHQTRVFDDHAL 250
D +VL CTHYPL+ + + + V +D+ R LL IN + H
Sbjct: 177 DTLVLGCTHYPLLKPIIQNVMGPAVKLIDSGAECVRDISVLLNYFEINHSREGELPQHRF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
F +
Sbjct: 237 FTTANAKSFAEIAETWL 253
>gi|302872434|ref|YP_003841070.1| glutamate racemase [Caldicellulosiruptor obsidiansis OB47]
gi|302575293|gb|ADL43084.1| glutamate racemase [Caldicellulosiruptor obsidiansis OB47]
Length = 267
Score = 244 bits (624), Expect = 8e-63, Method: Composition-based stats.
Identities = 55/255 (21%), Positives = 96/255 (37%), Gaps = 7/255 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL V +++ LMP + +Y D PYG+ + K M + L
Sbjct: 4 RPIGIFDSGLGGLTVFKEIVSLMPNENIVYFGDTARIPYGSKSKETVTKFAMQN-TRFLL 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ V+ACNTA + L+ +F P K A T++ + ++ T T+
Sbjct: 63 SKNVKIVVVACNTASAYAYETLKKSFDIPIVAVIEPGAKAAVNATKNKRVGVVGTEGTIA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I S + + VE ++ + E K D
Sbjct: 123 SGSFEKKILELDSSIKVFSKPCPLFVPLVE----EGWTDKEVTYLVAKEYLEEFSEKEID 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHALFL 252
+VL CTHYP + V +++ P V ++ + A++ +L + + + + +
Sbjct: 179 TLVLGCTHYPFLQDVIKKVLP-DVMLINPALETAKQVFEVLKENDMLNNSSEEPTYYFYA 237
Query: 253 SGKPDIAMRRLMQGF 267
S
Sbjct: 238 SDNLKKFESVASIFL 252
>gi|75907689|ref|YP_321985.1| glutamate racemase [Anabaena variabilis ATCC 29413]
gi|123610062|sp|Q3MD46|MURI_ANAVT RecName: Full=Glutamate racemase
gi|75701414|gb|ABA21090.1| glutamate racemase [Anabaena variabilis ATCC 29413]
Length = 292
Score = 244 bits (624), Expect = 8e-63, Method: Composition-based stats.
Identities = 57/264 (21%), Positives = 98/264 (37%), Gaps = 7/264 (2%)
Query: 6 YPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
+ ++ + I +FDSG+GGL VL+++ +P IY D PYG + +
Sbjct: 14 FSEQEPQRAPIGVFDSGVGGLTVLRQIYRQLPNESVIYFGDTARLPYGIRSQAEILTFVR 73
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI 125
+ + ++ + V+ACNT+ L D +R + +P K A + I +
Sbjct: 74 DILDWMQQQH-VKMVVMACNTSSALALDIVREEYDFPILGVILPGAKAAVQQGK--RIGV 130
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
+STPAT + I + V +E+ + +
Sbjct: 131 ISTPATAKSNAYRQAIWEIDPNVEVWQVGCPEFVPLIEQNRIQDPYTTEVAR----AYLE 186
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+ D +V CTHYPL+ V R L P V +D + + L + T
Sbjct: 187 PLIQQDIDTLVYGCTHYPLLAPVLRSLLPPQVKIIDPAVHVVTACTQELDILGLSNTHPP 246
Query: 246 DDHALFLSGKPDIAMRRLMQGFGL 269
+SG P + + G
Sbjct: 247 LPTRFAVSGCPQQFSQSGVNWLGY 270
>gi|259508024|ref|ZP_05750924.1| glutamate racemase [Corynebacterium efficiens YS-314]
gi|29839541|sp|Q8FMU6|MURI_COREF RecName: Full=Glutamate racemase
gi|259164365|gb|EEW48919.1| glutamate racemase [Corynebacterium efficiens YS-314]
Length = 273
Score = 244 bits (624), Expect = 8e-63, Method: Composition-based stats.
Identities = 57/259 (22%), Positives = 108/259 (41%), Gaps = 9/259 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + +P IY+ D PYG +++ + + + L
Sbjct: 10 DAPIGIFDSGVGGLTVARTIIDQLPHESIIYIGDTANGPYGPLPIARVREHALRIADE-L 68
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACNTA + R + +PA+++A A T++G + ++ T T+
Sbjct: 69 VERGCKMIVIACNTASAAFLRDARERYDVPVVEVILPAVRRAVAATRNGKVGVIGTVGTI 128
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+L + +H + VE + +I EG + +
Sbjct: 129 NSGAYQDLFAA-SPSIEVHAAACPRFVDFVERGITSGR----QILNIAEGYLEPLQAQGV 183
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT---RVFDDHA 249
D +VL CTHYPL+ V + V + +++ A+ +L + + ++
Sbjct: 184 DTLVLGCTHYPLLSGVIQLAMGDHVTLVSSAEETAKDVLRILSQNDLLADPTMHPTPTYS 243
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+G P++ + + G
Sbjct: 244 FESTGDPELFSQLSRRFLG 262
>gi|296170277|ref|ZP_06851868.1| glutamate racemase [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295895000|gb|EFG74719.1| glutamate racemase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 271
Score = 244 bits (623), Expect = 9e-63, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 103/256 (40%), Gaps = 8/256 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ IFDSG+GGL V + + +P+ +YV D PYG ++ + + D L
Sbjct: 7 PVGIFDSGVGGLTVARAIIDQLPDEDIVYVGDTGHGPYGPLTIPEVRAHALAIGDD-LVG 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
VIACNTA + R + +PA+++A A T++G I ++ T AT+
Sbjct: 66 RGVKALVIACNTASAACLRDARERYDVPVVEVILPAVRRAVATTRNGRIGVIGTQATINS 125
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + + V+ VE + ++ EG + + D
Sbjct: 126 HAYQDAFAA-ARDTEVTAVACPRFVDFVERGVTSGR----QVLGLAEGYLEPLQRAQVDT 180
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHALFL 252
+VL CTHYPL+ + + V + +++ A+ +L + +
Sbjct: 181 LVLGCTHYPLLSGLIQLAMGEQVTLVSSAEETAKEVLRVLTERDLLRAHEAPPATRVFEA 240
Query: 253 SGKPDIAMRRLMQGFG 268
+G P+ + + G
Sbjct: 241 TGDPEAFTKLAARFLG 256
>gi|270292152|ref|ZP_06198367.1| glutamate racemase [Streptococcus sp. M143]
gi|270279680|gb|EFA25522.1| glutamate racemase [Streptococcus sp. M143]
Length = 264
Score = 244 bits (623), Expect = 9e-63, Method: Composition-based stats.
Identities = 54/257 (21%), Positives = 104/257 (40%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P +Y+ D PYG +++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIREYTWQLVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNTA ++ +E+++ +P A +Q G I ++ TP T+
Sbjct: 63 TK-DVKMIVIACNTATAVVWEEIKAQLDIPVLGVILPGASAAIKSSQGGKIGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IH + ++ A VE A + + + + + +
Sbjct: 122 QSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLRPLVGK-----V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHAL 250
D ++L CTHYPL+ + + + V +D+ R LL +++R H
Sbjct: 177 DSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINRSRDAGPLQHRF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
+ + + +
Sbjct: 237 YTTANSQSFAQIGEEWL 253
>gi|254415880|ref|ZP_05029637.1| glutamate racemase [Microcoleus chthonoplastes PCC 7420]
gi|196177307|gb|EDX72314.1| glutamate racemase [Microcoleus chthonoplastes PCC 7420]
Length = 287
Score = 244 bits (623), Expect = 9e-63, Method: Composition-based stats.
Identities = 59/255 (23%), Positives = 100/255 (39%), Gaps = 7/255 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GGL VL+++ +P +Y AD PYG + + + + ++
Sbjct: 16 RRIGVFDSGVGGLTVLRELYRQLPHESILYFADTARLPYGTRSPREIIQFGREILTWMV- 74
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ + V+ACNT+ L D LR F +P + A + I +++TPAT
Sbjct: 75 EQDVKMVVLACNTSDALALDTLRREFQLPILGLILPGSRAAVQVGR--RIGVIATPATAA 132
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + VS VE+ + +R D
Sbjct: 133 SNAYRRALLEVEPTAQVWQVSCPEFVPLVEQNRLYEPYTSEV----ALQYLTPLLQQRID 188
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++ CTHYPL+ V RQ+ P V +D ++ + A L + + +S
Sbjct: 189 TLIYGCTHYPLLAPVLRQILPASVQLIDPAEHVVAAAAQELDLMGLKNSSPPLPTRFCVS 248
Query: 254 GKPDIAMRRLMQGFG 268
G P + +Q G
Sbjct: 249 GCPQQFAKLSVQWLG 263
>gi|70726812|ref|YP_253726.1| glutamate racemase [Staphylococcus haemolyticus JCSC1435]
gi|123659934|sp|Q4L5F5|MURI_STAHJ RecName: Full=Glutamate racemase
gi|68447536|dbj|BAE05120.1| Glutamate racemase [Staphylococcus haemolyticus JCSC1435]
Length = 266
Score = 244 bits (623), Expect = 9e-63, Method: Composition-based stats.
Identities = 58/257 (22%), Positives = 97/257 (37%), Gaps = 5/257 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ L +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIARCPYGPRPGDEVKQFTTQLANK- 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L ++ + VIACNTA + + L+ P P + A T++ + IL T T
Sbjct: 60 LMQFDIKMLVIACNTATAVALEHLQQMLPIPVIGVIEPGSRTAIMTTKNQNVLILGTEGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + I H++ V+ VE+ + I +
Sbjct: 120 IKSEAYRHHIKHINPNVHVYGVACPGFVPLVEQMRYDDPTITSIV---IHQTLKQWRNTD 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D I+L CTHYPL+ + + AR LL N H + +H
Sbjct: 177 ADTIILGCTHYPLLYKPINDYFGGEKKVISSGLETAREVSALLTFSNEHASYTQHPEHRF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
F +G ++Q
Sbjct: 237 FATGDTVHIKNIILQWL 253
>gi|317471031|ref|ZP_07930406.1| Asp/Glu/Hydantoin racemase [Anaerostipes sp. 3_2_56FAA]
gi|316901472|gb|EFV23411.1| Asp/Glu/Hydantoin racemase [Anaerostipes sp. 3_2_56FAA]
Length = 272
Score = 244 bits (623), Expect = 9e-63, Method: Composition-based stats.
Identities = 58/256 (22%), Positives = 101/256 (39%), Gaps = 6/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL V +++ +P+ IY D PYG + + + + +L
Sbjct: 7 NAPIGVFDSGVGGLTVAREIMRQLPDESMIYFGDTARVPYGTKSKDTVIRYSRQIVNFLL 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K VIACNTA L +L+ + P AA T++ I I+ T AT+
Sbjct: 67 SK-NVKAIVIACNTASALAMHKLQQEYIVPMIGMVRPGAIAAARATKNHHIGIIGTNATV 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + + + VEE +I ED + E + +
Sbjct: 126 KSGQYGKYLRELNPDVTVVTKACPLFVPLVEEGLIDDRITED----MVSRYLREFDQYQI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALF 251
D ++L CTHYPL+ + + V ++ + A+ R LL ++ +
Sbjct: 182 DSLILGCTHYPLLQNPIKNFVGDNVTLINPAYETAKSLRELLKEREMEAESGHTAEYHYY 241
Query: 252 LSGKPDIAMRRLMQGF 267
+S D + +
Sbjct: 242 VSDMEDQFLSFADRVL 257
>gi|300932724|ref|ZP_07147980.1| glutamate racemase [Corynebacterium resistens DSM 45100]
Length = 270
Score = 244 bits (623), Expect = 9e-63, Method: Composition-based stats.
Identities = 57/262 (21%), Positives = 107/262 (40%), Gaps = 9/262 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I IFDSG+GGL V + + L+P + +Y+ D PYG+ +++ + +
Sbjct: 1 MSNNAPIGIFDSGVGGLTVARAVVDLLPRENIVYIGDTANSPYGDKPLAQVRQLSIAIAD 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L + + V+ACN+A + + R +P +PA+++A A T++G + ++ T
Sbjct: 61 E-LVERGCKMIVVACNSASSAFIRDARERYPVPVIEVILPAVRRAVAATRNGKVGVIGTH 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ +L + + + VE + +I E +
Sbjct: 120 ATVTSGSYQDLFAA-SPNVEVTAQACPQFVPFVERGITTGR----QIVGLAENYLEPLKD 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--- 246
D +VL CTHYPL+ V + + V ++++D A+ L + D
Sbjct: 175 AGVDTVVLGCTHYPLLAGVVQLVMGDDVTLVNSADETAKMTYRALSEADMLADEDPDREV 234
Query: 247 DHALFLSGKPDIAMRRLMQGFG 268
+G P + G
Sbjct: 235 KLVFESTGDPQRFAHLAQRFLG 256
>gi|319938692|ref|ZP_08013056.1| glutamate racemase [Streptococcus anginosus 1_2_62CV]
gi|319811742|gb|EFW08008.1| glutamate racemase [Streptococcus anginosus 1_2_62CV]
Length = 264
Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats.
Identities = 60/257 (23%), Positives = 98/257 (38%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P IY+ D PYG +++ L L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPADQIREYTWQLV-QFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA ++ +E++ +P A +Q G I I+ TP T+
Sbjct: 62 LTKNVKMIVLACNTATAVVWEEIKEKLDIPVLGVILPGASAAIKASQHGKIGIIGTPMTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I + + + +S VE I KK + + +GK
Sbjct: 122 QSDIYRQKIERLLPEVEVTSLSCPKFVPLVESNELSSSIT----KKVVYESLMPLKGK-V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--RINTHQTRVFDDHAL 250
D +VL CTHYPL+ + + + V +D+ R LL IN + H
Sbjct: 177 DTLVLGCTHYPLLKPIIQNVMGPTVKLIDSGAECVRDISVLLNYFEINHSREGELPQHRF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
F +
Sbjct: 237 FTTANAKSFAEIAETWL 253
>gi|253698914|ref|YP_003020103.1| glutamate racemase [Geobacter sp. M21]
gi|251773764|gb|ACT16345.1| glutamate racemase [Geobacter sp. M21]
Length = 278
Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats.
Identities = 57/256 (22%), Positives = 105/256 (41%), Gaps = 6/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I IFDSG+GGL VL+++ +P+ IY+ D PYG + + + L
Sbjct: 4 KAIGIFDSGVGGLTVLKEVVRALPQEDTIYLGDTARVPYGTKSPETVVRYSRQIA-RYLL 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
L V+ACNTA + L+ F P + AAA T+SG + ++ T AT+
Sbjct: 63 NRDIKLLVVACNTASAVALSALQQEFSIPIVGVIEPGARAAAAATKSGKVGVIGTAATVA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + I + + + E + + + + + D
Sbjct: 123 SSAYTKAIKRINPDIEVVNRACPLFVPLAE----EGWVDNEVARLTAGIYLEDLKKHGVD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALFL 252
+VL CTHYP++ V ++ V +D+++ A +L + + +H ++
Sbjct: 179 TLVLGCTHYPILKDVIAEVMGPEVTLVDSAEQTALTVAGILGEQGLLRPKGERGNHHYYV 238
Query: 253 SGKPDIAMRRLMQGFG 268
+ P +R + G
Sbjct: 239 TDIPAGFIRVGNRFLG 254
>gi|312876812|ref|ZP_07736790.1| glutamate racemase [Caldicellulosiruptor lactoaceticus 6A]
gi|311796431|gb|EFR12782.1| glutamate racemase [Caldicellulosiruptor lactoaceticus 6A]
Length = 267
Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats.
Identities = 55/255 (21%), Positives = 94/255 (36%), Gaps = 7/255 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL V +++ LMP +Y D PYG+ + K M + L
Sbjct: 4 RPIGIFDSGLGGLTVFKEIVSLMPNESIVYFGDTARIPYGSKSKETVTKFAMQN-TRFLL 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ V+ACNTA + L++ F P + A T++ I ++ T T+
Sbjct: 63 SKNVKIVVVACNTASAYAYEALKAKFDIPIVAVIEPGAEAAVRATKNKRIGVIGTEGTIA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I S + + VE ++ + E K D
Sbjct: 123 SGAFEKKILELDSSLQVFSKPCPLFVPLVE----EGWTDKEVTYLVAKEYLEEFNEKEID 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHALFL 252
+V+ CTHYP + V +++ P V ++ + A++ LL + + + +
Sbjct: 179 TLVMGCTHYPFLQDVIKKVLPD-VMLINPALETAKQVFELLKENDMLNSSSEEPTYYFYA 237
Query: 253 SGKPDIAMRRLMQGF 267
S
Sbjct: 238 SDNLKKFESVASIFL 252
>gi|115373706|ref|ZP_01461000.1| glutamate racemase [Stigmatella aurantiaca DW4/3-1]
gi|310823643|ref|YP_003956001.1| glutamate racemase [Stigmatella aurantiaca DW4/3-1]
gi|115369253|gb|EAU68194.1| glutamate racemase [Stigmatella aurantiaca DW4/3-1]
gi|309396715|gb|ADO74174.1| Glutamate racemase [Stigmatella aurantiaca DW4/3-1]
Length = 270
Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats.
Identities = 55/256 (21%), Positives = 103/256 (40%), Gaps = 6/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I +FDSG+GGL VL+ + +P + +Y+ D PYG + + + L
Sbjct: 7 SPIGVFDSGVGGLTVLKALMERLPHENTLYLGDTARVPYGTKSGEVVTRYSLKNA-QFLL 65
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L V+ACNTA + L + P + A T+ G + ++ TP T+R
Sbjct: 66 EKGIKLLVVACNTASAVALPALSAALSVPVLGVIAPGAQAALRRTRGGGVGVIGTPGTIR 125
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + + + + + EE ++ ++ + + D
Sbjct: 126 SGAYQRELQAADPKVQVKARACPLFVPLAEEGWTQGEVPALVARE----YLADFAREGVD 181
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR-INTHQTRVFDDHALFL 252
+VL CTHYPL+ + Q+ V +D++++ A LL + H F+
Sbjct: 182 TLVLGCTHYPLLKDIIAQVVGPRVSLVDSAEATAEAVALLLEQTQGLAPPGGVPVHGYFV 241
Query: 253 SGKPDIAMRRLMQGFG 268
+ P+ M + G
Sbjct: 242 TDVPERFMEVGARFLG 257
>gi|222530006|ref|YP_002573888.1| glutamate racemase [Caldicellulosiruptor bescii DSM 6725]
gi|222456853|gb|ACM61115.1| glutamate racemase [Caldicellulosiruptor bescii DSM 6725]
Length = 267
Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats.
Identities = 56/255 (21%), Positives = 95/255 (37%), Gaps = 7/255 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL V +++ LMP +Y D PYG+ + K M + L
Sbjct: 4 RPIGIFDSGLGGLTVFKEIVSLMPNESIVYFGDTARIPYGSKSKETVTKFAMQN-TRFLL 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ V+ACNTA + L++ F P + A T++ I ++ T T+
Sbjct: 63 SKNVKIVVVACNTASAYAYEALKAKFDVPIVAVIEPGAEAAVRSTKNKKIGVIGTEGTIS 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I + + + VE ++ + E K D
Sbjct: 123 SGAFEKKILELDNSIKVFSKPCPLFVPLVE----EGWTDKEVTYLVAKEYLEEFNEKAID 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHALFL 252
+VL CTHYP + V R++ P V ++ + A++ LL + + + + +
Sbjct: 179 TLVLGCTHYPFLQDVIRKVLP-NVMLINPALETAKQVFELLKMNDMLNNSSEEPTYYFYA 237
Query: 253 SGKPDIAMRRLMQGF 267
S
Sbjct: 238 SDNLKKFESVASIFL 252
>gi|306830119|ref|ZP_07463303.1| glutamate racemase [Streptococcus mitis ATCC 6249]
gi|304427645|gb|EFM30741.1| glutamate racemase [Streptococcus mitis ATCC 6249]
Length = 264
Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats.
Identities = 54/257 (21%), Positives = 104/257 (40%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P +Y+ D PYG +++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIREYTWQLVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNTA ++ +E+++ +P A +Q G I ++ TP T+
Sbjct: 63 TK-DVKMIVIACNTATAVVWEEIKAKLDIPVLGVILPGASAAIKSSQGGKIGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IH + ++ A VE A + + + + + +
Sbjct: 122 QSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLRPLVGK-----V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHAL 250
D ++L CTHYPL+ + + + V +D+ R LL +++R H
Sbjct: 177 DSLILGCTHYPLLRPIIQNVMGPDVKLIDSGAECVRDISVLLNYFEINRSRDAGPLQHRF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
+ + + +
Sbjct: 237 YTTASSQSFAQIGAEWL 253
>gi|118465713|ref|YP_880790.1| glutamate racemase [Mycobacterium avium 104]
gi|254774375|ref|ZP_05215891.1| glutamate racemase [Mycobacterium avium subsp. avium ATCC 25291]
gi|166231040|sp|A0QD02|MURI_MYCA1 RecName: Full=Glutamate racemase
gi|118167000|gb|ABK67897.1| glutamate racemase [Mycobacterium avium 104]
Length = 275
Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats.
Identities = 60/260 (23%), Positives = 103/260 (39%), Gaps = 12/260 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ IFDSG+GGL V + + +P+ H IYV D PYG ++ + + D L
Sbjct: 7 PVGIFDSGVGGLTVARAIIDQLPDEHIIYVGDTGHGPYGPLSIPEVRAHALAIGDD-LVG 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
VIACNTA + R + +PA+++A A T++G I ++ T AT+
Sbjct: 66 RGVKALVIACNTASAACLRDARERYEVPVVEVILPAVRRAVATTRNGRIGVIGTQATINS 125
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + I V+ VE + ++ EG + + D
Sbjct: 126 HAYQDAFAA-ARDTEITAVACPRFVDFVERGVTSGR----QVLGLAEGYLEPLQRAQVDT 180
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF------DDH 248
+VL CTHYPL+ + + V + +++ A+ +L +
Sbjct: 181 LVLGCTHYPLLSGLIQLAMGDNVTLVSSAEETAKEVLRVLTERDLLHPHPDDPRAAGPSR 240
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+G P+ R + G
Sbjct: 241 VFEATGDPEAFTRLAARFLG 260
>gi|212213193|ref|YP_002304129.1| glutamate racemase [Coxiella burnetii CbuG_Q212]
gi|212011603|gb|ACJ18984.1| glutamate racemase [Coxiella burnetii CbuG_Q212]
Length = 280
Score = 244 bits (623), Expect = 1e-62, Method: Composition-based stats.
Identities = 62/260 (23%), Positives = 116/260 (44%), Gaps = 4/260 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K I +FDSG+GGL VL+++ +P +IY+ D PYG + + + S
Sbjct: 1 MKNGRPIGVFDSGMGGLTVLRELVNHLPNESYIYLGDTARLPYGTKSPETVSRYATQMAS 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
IL L V+ACNTA T +L+ FP + +G V P + A T++ +++L+T
Sbjct: 61 -ILITQNIKLLVVACNTASTAALPQLQQQFPHIPIIGVVEPGARAAVVATKNNKVALLAT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ N + + Q I + + + EE +I KK +E
Sbjct: 120 ETTIQSGIYQNTLRALSPQIEITTQTCGLFVALAEEGCTNDEIALLVAKKYLEPIINGY- 178
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
+ D ++L CTH+P+++ + ++ ++++ + A + +L + N
Sbjct: 179 -HQCDSVILGCTHFPVLMEPLAAILGDQINIINSAKATATEVQSILQKNNPTPLDHPPTL 237
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+ ++ P+ R FG
Sbjct: 238 SFLVTDSPERFTRIGEIFFG 257
>gi|41408522|ref|NP_961358.1| glutamate racemase [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|81571208|sp|Q73X85|MURI_MYCPA RecName: Full=Glutamate racemase
gi|41396878|gb|AAS04741.1| MurI [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 275
Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 60/260 (23%), Positives = 103/260 (39%), Gaps = 12/260 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ IFDSG+GGL V + + +P+ H IYV D PYG ++ + + D L
Sbjct: 7 PVGIFDSGVGGLTVARAIIDQLPDEHIIYVGDTGHGPYGPLSIPEVRAHALAIGDD-LVG 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
VIACNTA + R + +PA+++A A T++G I ++ T AT+
Sbjct: 66 RGVKALVIACNTASAACLRDARERYEVPVVEVILPAVRRAVATTRNGRIGVIGTQATINS 125
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + I V+ VE + ++ EG + + D
Sbjct: 126 HAYQDAFAA-ARDTEITAVACPRFVDFVERGVTSGR----QVLGLAEGYLEPLQRAQVDT 180
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF------DDH 248
+VL CTHYPL+ + + V + +++ A+ +L +
Sbjct: 181 LVLGCTHYPLLSGLIQLAMGDNVTLVSSAEETAKEVLRVLAERDLLHPHPDDPRAAGPSR 240
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+G P+ R + G
Sbjct: 241 VFEATGDPEAFTRLAARFLG 260
>gi|312864874|ref|ZP_07725105.1| glutamate racemase [Streptococcus downei F0415]
gi|311100001|gb|EFQ58214.1| glutamate racemase [Streptococcus downei F0415]
Length = 264
Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 102/258 (39%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P +Y+ D PYG ++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAQQIRDYTWQLVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNTA ++ +E++ +P A T SG I ++ TP T+
Sbjct: 63 TK-DVKMIVIACNTATAVVWEEIKEKLDIPVLGVVLPGSSAAIKSTSSGKIGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I Q + ++ A VE ++ KK + GK
Sbjct: 122 KSDIYREKIVDLAPQMQVTSLACPRFAPLVE----SNQMTSSVAKKVVYESLAPLVGK-V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV--FDDHAL 250
D ++L CTHYPL+ + + + V +D+ R LL +++R H
Sbjct: 177 DTLILGCTHYPLLRGIIQNVMGPSVKLIDSGAETIRDVSVLLNYFQLNRSREVATSQHRF 236
Query: 251 FLSGKPDIAMRRLMQGFG 268
+ + + G
Sbjct: 237 YTTAGVESFKEIAETWLG 254
>gi|308068443|ref|YP_003870048.1| glutamate racemase [Paenibacillus polymyxa E681]
gi|305857722|gb|ADM69510.1| Glutamate racemase [Paenibacillus polymyxa E681]
Length = 271
Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 61/260 (23%), Positives = 102/260 (39%), Gaps = 6/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+Q +I I DSG+GGL V++++ +P IY D PYG +KK +
Sbjct: 1 MYVQQAIAILDSGVGGLTVVKEVMRQLPREKIIYFGDTARTPYGPRPSEEVKKFTEQMVD 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L ++ P + +IACNTA D + P + A + T +G + ++ T
Sbjct: 61 -FLIQFDPKVIIIACNTATAAALDYISQKVSIPVIGVIHPGARAAISATATGHVGVIGTV 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+R + + + + L VE+ K + E +
Sbjct: 120 GTIRSGAYTAALKQLSPYVDVVSHACPALVPLVEQGLFRSKTTSQVV----EETLRPIQT 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248
D ++L CTHYP + +++ V + ++D AR +L H
Sbjct: 176 YPIDCLILGCTHYPFLKETIQEVMGPAVKLISSADETARETSTILYNKGKLEAGDETPVH 235
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
LF SG P++ R Q G
Sbjct: 236 QLFCSGDPELFQRIAAQWLG 255
>gi|291299061|ref|YP_003510339.1| glutamate racemase [Stackebrandtia nassauensis DSM 44728]
gi|290568281|gb|ADD41246.1| glutamate racemase [Stackebrandtia nassauensis DSM 44728]
Length = 277
Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 63/259 (24%), Positives = 104/259 (40%), Gaps = 8/259 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I IFDSG+GGL V + +R L+P +YV D PYG +++ + L
Sbjct: 3 EAPIGIFDSGVGGLTVARAIRDLLPAERLLYVGDTARAPYGPRSIAQIRQYTLDACD-YL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
VIACNTA + +LR F PA ++A T++G + ++ T AT+
Sbjct: 62 VGQGVKALVIACNTASSASLADLRERFDVPVLEVIRPAARRAVTVTRNGRVGVIGTIATV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ HS + V+ VE + ++ +G + +
Sbjct: 122 TSGAYGDAFHS-APSVTLTSVACPAFVDFVERGVTTGR----QLLGLAQGYLEPLQRSQV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFDDHAL 250
D +VL CTHYPL+ + + V + +S+ AR +L + + H
Sbjct: 177 DTLVLGCTHYPLLAGLIGLVMGDEVTLVSSSEEAARDVYKVLNERDLLRDNTLPAPAHRF 236
Query: 251 FLSGKPDIAMRRLMQGFGL 269
+G R + GL
Sbjct: 237 GATGDTGAFARLAQRVLGL 255
>gi|119509564|ref|ZP_01628711.1| glutamate racemase [Nodularia spumigena CCY9414]
gi|119465753|gb|EAW46643.1| glutamate racemase [Nodularia spumigena CCY9414]
Length = 297
Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 55/259 (21%), Positives = 101/259 (38%), Gaps = 7/259 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ + I +FDSG+GGL VL+++ +P IY D PYG + + + + +
Sbjct: 28 EPQRAPIGVFDSGVGGLTVLRQLYRHLPNESIIYFGDTARLPYGIRTQVEILQYVREILN 87
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ + + + ++ACNT+ L + +R F +P K A + I +++TP
Sbjct: 88 WM-QQQRVKMVIMACNTSSALALEIVRREFSLPIIGVILPGAKAAVQQGK--RIGVIATP 144
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT + + I + + VS +E+ + +
Sbjct: 145 ATAKSNAYRHAILEMDANVQVWQVSCPEFVPLIEQNRINDPYTTEVAR----SYLEPLIQ 200
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+ D +V CTHYP + + R L P V +D + + L + T
Sbjct: 201 QEIDTLVYGCTHYPHLAPILRSLLPSQVKLVDPAVHVVAACTQELELLGLTNTHPPLPTR 260
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+SG P + +Q G
Sbjct: 261 FAVSGCPQKFAKSGVQWLG 279
>gi|326330807|ref|ZP_08197108.1| glutamate racemase [Nocardioidaceae bacterium Broad-1]
gi|325951337|gb|EGD43376.1| glutamate racemase [Nocardioidaceae bacterium Broad-1]
Length = 285
Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 53/257 (20%), Positives = 97/257 (37%), Gaps = 7/257 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG GGL V + + + +YV D PYG +++ + L
Sbjct: 21 DAPIGIFDSGFGGLTVARSVIDQLAHESILYVGDTARAPYGPRPIAEVREYALECLD-HL 79
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+ VIACN+A + + R + + + + PA ++A A +++G I ++ T AT
Sbjct: 80 VEQGVKALVIACNSASAAMLRDARERYKPLPVVEVILPATRRAVAASRTGRIGVICTHAT 139
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + +H + VE G +E+
Sbjct: 140 AESMAYDDAFAA-APHVSLHTRACPQFVPFVEAGVTGG----EELLAAAHEYLDPLTSAG 194
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ V + V + +++ A+ +L + + +
Sbjct: 195 VDTLILGCTHYPLLTGVISYVMGDNVTLVSSAEESAKDVYRVLAENDLMREGGEPTYTFL 254
Query: 252 LSGKPDIAMRRLMQGFG 268
+G P + G
Sbjct: 255 TTGNPAEFKAIGARFLG 271
>gi|260892383|ref|YP_003238480.1| glutamate racemase [Ammonifex degensii KC4]
gi|260864524|gb|ACX51630.1| glutamate racemase [Ammonifex degensii KC4]
Length = 265
Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 57/254 (22%), Positives = 100/254 (39%), Gaps = 6/254 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GGL VL ++ L+P +Y AD + PYG+ L + L
Sbjct: 5 RPIGLFDSGVGGLTVLAQIVRLLPHESIVYFADTLNLPYGDKTPAELIALGDRII-RFLL 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
V ACNT+ ++ + L+ +P + A ++ G I IL+T AT++
Sbjct: 64 AQGVKCVVFACNTSSSISLEVLQQRYPVPMLGLLQAGARLALKSSRRGRIGILATAATVK 123
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I Q + ++ L +E I E + + + D
Sbjct: 124 SGAYEKAIKDLCPQAQVFSQAAPRLVPLIESGE----IDTPEAEAALREYLTPLKEAGID 179
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++ CTHYP + + V +D + ++ + LL + H +F+S
Sbjct: 180 TLIFGCTHYPFLAPLISSFMGPGVALVDPAVAVVEELKELLSQKGLLANST-PFHRIFVS 238
Query: 254 GKPDIAMRRLMQGF 267
G P+ R + +
Sbjct: 239 GDPESFDRLARRLY 252
>gi|154707217|ref|YP_001425115.1| glutamate racemase [Coxiella burnetii Dugway 5J108-111]
gi|154356503|gb|ABS77965.1| glutamate racemase [Coxiella burnetii Dugway 5J108-111]
Length = 280
Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 62/260 (23%), Positives = 116/260 (44%), Gaps = 4/260 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K I +FDSG+GGL VL+++ +P +IY+ D PYG + + + S
Sbjct: 1 MKNGRPIGVFDSGMGGLTVLRELVNHLPNESYIYLGDTARLPYGTKSPETVSRYATQMAS 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
IL L V+ACNTA T +L+ FP + +G V P + A T++ +++L+T
Sbjct: 61 -ILIAQNIKLLVVACNTASTAALPQLQQQFPHIPIIGVVEPGARAAVVATKNNKVALLAT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ N + + Q I + + + EE +I KK +E
Sbjct: 120 ETTIQSGIYQNTLRALSPQIEITTQTCGLFVALAEEGCTNDEIALLVAKKYLEPIINGY- 178
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
+ D ++L CTH+P+++ + ++ ++++ + A + +L + N
Sbjct: 179 -HQCDSVILGCTHFPVLMEPLAAILGDQINIINSAKATATEVQSILQKNNPTPLDHPPTL 237
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+ ++ P+ R FG
Sbjct: 238 SFLVTDSPERFTRIGEIFFG 257
>gi|239832083|ref|ZP_04680412.1| glutamate racemase [Ochrobactrum intermedium LMG 3301]
gi|239824350|gb|EEQ95918.1| glutamate racemase [Ochrobactrum intermedium LMG 3301]
Length = 278
Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 139/259 (53%), Positives = 187/259 (72%), Gaps = 1/259 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ IL+FDSGIGGL VL++ R LMP+ F+YVADD GFPYG WE+ AL+ R++ LF ++
Sbjct: 18 ERPILVFDSGIGGLTVLREARVLMPDRRFVYVADDAGFPYGGWEEDALRARIVQLFGKLI 77
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Y P ++VIACNTA TL+ D+LR+ +P++ F+G VPAIK AA T SGL+S+L+TP T+
Sbjct: 78 ADYDPEIAVIACNTASTLVLDDLRNAYPAVPFVGTVPAIKPAAERTSSGLVSVLATPGTV 137
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
RR YT +LI S+ SQCH+ LV + LA+ E + G KI E + +I CFIE++G RT
Sbjct: 138 RRAYTRDLIQSFASQCHVRLVGADQLAAVAEAHIRGEKIDEALVVAQIAPCFIEQDGNRT 197
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQTRVFDDHALF 251
D++VLACTHYP + +VFR+L+PWPVDWLD +++IARR LL PR + +D A+
Sbjct: 198 DIVVLACTHYPFLANVFRRLAPWPVDWLDPAEAIARRTVSLLKPRRAVEELHHHNDLAVV 257
Query: 252 LSGKPDIAMRRLMQGFGLK 270
S PD A+RRLMQGFGL
Sbjct: 258 TSQNPDYAIRRLMQGFGLH 276
>gi|312958853|ref|ZP_07773372.1| Glutamate racemase [Pseudomonas fluorescens WH6]
gi|311286623|gb|EFQ65185.1| Glutamate racemase [Pseudomonas fluorescens WH6]
Length = 264
Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 66/251 (26%), Positives = 111/251 (44%), Gaps = 5/251 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GG+ VL +++ L+P +YVAD PYG + +R +
Sbjct: 4 DAPIGVFDSGVGGVSVLDEIQRLLPHESLLYVADGGHIPYGEKTPAFILERSRRVAEFFR 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+K VIACNTA +LR FP +G PA+K AAA T++G++ +L+T TL
Sbjct: 64 EK-GAKAFVIACNTATVAAVADLRQDFPDWPLVGMEPAVKPAAAATRAGVVGVLATTGTL 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + + + L +E + ++ ++G
Sbjct: 123 QSAKFAALLDRFATDVRVITQPCPGLVELIET----GDLTSPALRTLLQGYIDPLLSAGC 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D I+L CTHYP + + Q+ P + +D ++AR+ + LL + +
Sbjct: 179 DTIILGCTHYPFLKPLLAQMLPSSITLIDTGAAVARQLKRLLGERDLLAVANPAPAQFWT 238
Query: 253 SGKPDIAMRRL 263
SG L
Sbjct: 239 SGDVCHLRNIL 249
>gi|309798855|ref|ZP_07693116.1| glutamate racemase [Streptococcus infantis SK1302]
gi|308117504|gb|EFO54919.1| glutamate racemase [Streptococcus infantis SK1302]
Length = 264
Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 54/257 (21%), Positives = 104/257 (40%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P +Y+ D PYG +++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIREYTWQLVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNTA ++ +E+++ +P A +Q G I ++ TP T+
Sbjct: 63 TK-DVKMIVIACNTATAVVWEEIKAQLDIPVLGVILPGASAAIKASQGGKIGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IH + ++ A VE A + + + + + +
Sbjct: 122 KSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLRPLVGK-----V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHAL 250
D ++L CTHYPL+ + + + V +D+ R LL +++R H
Sbjct: 177 DSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINRSRDAAPLQHRF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
+ + + +
Sbjct: 237 YTTANSQSFAQIGAEWL 253
>gi|13470360|ref|NP_101926.1| glutamate racemase [Mesorhizobium loti MAFF303099]
gi|14021099|dbj|BAB47712.1| glutamate racemase [Mesorhizobium loti MAFF303099]
Length = 276
Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats.
Identities = 131/258 (50%), Positives = 179/258 (69%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
IL+FDSG+GGL VL++ R LMP+ F+YVADD FP+G WE+ AL+ ++ LF +L
Sbjct: 17 DQPILMFDSGVGGLTVLREARVLMPDRRFVYVADDAAFPFGAWEEPALRTHILDLFVKLL 76
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
D++ P +SVIACNTA TL+ D LR FP F+G VPA+K AA T+SGL+S+L+TP T+
Sbjct: 77 DRFAPAISVIACNTASTLVIDALRERFPGHPFVGTVPAVKPAAERTRSGLVSVLATPGTV 136
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT +LI + +CH+ LV S LA E Y + E+ ++ EI CF+E EG RT
Sbjct: 137 KRQYTRDLISKWAQKCHVRLVGSDRLAGLAEVYMREGFVDEEAVRAEIAPCFMEHEGLRT 196
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D++VLACTHYP +V+ R+ +PWPVDW+D +++IARRA LLP ++ + D A+F
Sbjct: 197 DIVVLACTHYPFLVNRMRKTAPWPVDWIDPAEAIARRALSLLPPVDGALPQGEPDIAVFT 256
Query: 253 SGKPDIAMRRLMQGFGLK 270
SGK D A+ RLMQGFGL
Sbjct: 257 SGKTDFAIGRLMQGFGLS 274
>gi|170723614|ref|YP_001751302.1| glutamate racemase [Pseudomonas putida W619]
gi|229486248|sp|B1JEP3|MURI_PSEPW RecName: Full=Glutamate racemase
gi|169761617|gb|ACA74933.1| glutamate racemase [Pseudomonas putida W619]
Length = 265
Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats.
Identities = 65/251 (25%), Positives = 110/251 (43%), Gaps = 5/251 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ + DSG+GGL VL +++ L+P +YVAD PYG +++R +
Sbjct: 5 SAPVGVMDSGVGGLSVLAEIQRLLPSESLLYVADCGHVPYGEKTPDYIRQRCRRIAEFF- 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
V+ACNTA +LR +P +G PA+K AAA T+SG++ +L+T TL
Sbjct: 64 QAQGAKAMVLACNTATVAAVADLRERYPDWPLVGMEPAVKPAAAATRSGVVGVLATTGTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + + + L +E G ++++ + G
Sbjct: 124 QSAKFAALLDRFANDVRVVTQPCPGLVELIETGDLG----SLQLRQLLLGYVQPLLAAGC 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP + + + P V +D ++AR+ + LL D A +
Sbjct: 180 DTLILGCTHYPFLRPLLAGMVPADVAIIDTGAAVARQLKRLLAARELLADGPARDAAFWS 239
Query: 253 SGKPDIAMRRL 263
S P L
Sbjct: 240 SADPRSLENIL 250
>gi|325293269|ref|YP_004279133.1| Glutamate racemase [Agrobacterium sp. H13-3]
gi|325061122|gb|ADY64813.1| Glutamate racemase [Agrobacterium sp. H13-3]
Length = 273
Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats.
Identities = 145/257 (56%), Positives = 187/257 (72%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+L+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK R++ LF +L+
Sbjct: 13 KPVLVFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEEALKARILSLFEKLLE 72
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
Y P + +IACNTAFTL +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++
Sbjct: 73 DYSPEVCIIACNTAFTLAGADLRARFPDMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 132
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI S+ +QCH+ LV S LA E + G I ++ + EIE CFI+ +GKRTD
Sbjct: 133 RAYTRDLIQSFATQCHVRLVGSENLARMAESWIRGEPISDEAVLAEIEPCFIDSDGKRTD 192
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++VLACTHYP + +VFR+L+PWPVDWLD +++IARRAR L+P + D A+F S
Sbjct: 193 IVVLACTHYPFMANVFRRLAPWPVDWLDPAEAIARRARHLVPLPQDAEHPDGFDFAVFTS 252
Query: 254 GKPDIAMRRLMQGFGLK 270
GKPD A RRLMQGFGL
Sbjct: 253 GKPDFATRRLMQGFGLS 269
>gi|240169479|ref|ZP_04748138.1| glutamate racemase [Mycobacterium kansasii ATCC 12478]
Length = 271
Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats.
Identities = 58/256 (22%), Positives = 104/256 (40%), Gaps = 8/256 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ IFDSG+GGL V + + +P+ IYV D PYG ++ + + D L
Sbjct: 7 PVGIFDSGVGGLTVARAIIDQLPDEDIIYVGDTGNGPYGPLTIPEIRAHALAIGDD-LVD 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ VIACN+A + R + +PA+++A A T++G I ++ T AT+
Sbjct: 66 RGVKVLVIACNSASAACLRDARERYDVPVVEVILPAVRRAVAATRNGRIGVIGTRATITS 125
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + I V+ VE + ++ EG + D
Sbjct: 126 HAYQDAFAA-ARDTEITAVACPRFVDFVERGVTSGR----QVLGLAEGYLEPLQRAGVDT 180
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHALFL 252
+VL CTHYPL+ + + V + +++ A+ +L + + +
Sbjct: 181 LVLGCTHYPLLSGLIQLAMGDHVTLVSSAEETAKEVLRVLTQSDLLRPHDAPPATRVFEA 240
Query: 253 SGKPDIAMRRLMQGFG 268
+G P+ R + G
Sbjct: 241 TGDPEAFTRLAARFLG 256
>gi|117926510|ref|YP_867127.1| glutamate racemase [Magnetococcus sp. MC-1]
gi|117610266|gb|ABK45721.1| glutamate racemase [Magnetococcus sp. MC-1]
Length = 272
Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats.
Identities = 54/256 (21%), Positives = 101/256 (39%), Gaps = 7/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL VL+ + P+ FIY+ D PYG +++ + + L
Sbjct: 9 RPIGIFDSGVGGLTVLRTLARRFPQESFIYLGDTARVPYGTKSPRTVERYTLQVAD-HLQ 67
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLG-AVPAIKQAAAYTQSGLISILSTPATL 132
++ V ACNTA L LR+ P + G VP + A TQ+G + ++ T AT+
Sbjct: 68 RHGVKGVVAACNTASALGLGALRAHQPKLPVQGVIVPGCRSALNVTQTGRVGVIGTRATI 127
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
++ + ++ + E + +
Sbjct: 128 SSGAYRTTLNLLNPTIEVSDIACPLFVPLAE----EGWTHHAATEMIVRETLTPLLDSDI 183
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF- 251
D ++L CTHYP++ V +++ V +D+++++A L + L+
Sbjct: 184 DTLILGCTHYPVLKEVIQKVMGEGVMLVDSAEAVADELEQRLSDTILPNHSGAERTILYL 243
Query: 252 LSGKPDIAMRRLMQGF 267
++ + +
Sbjct: 244 VTDEAARFASVARRFL 259
>gi|20177985|sp|Q98NP9|MURI_RHILO RecName: Full=Glutamate racemase
Length = 262
Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats.
Identities = 131/258 (50%), Positives = 179/258 (69%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
IL+FDSG+GGL VL++ R LMP+ F+YVADD FP+G WE+ AL+ ++ LF +L
Sbjct: 3 DQPILMFDSGVGGLTVLREARVLMPDRRFVYVADDAAFPFGAWEEPALRTHILDLFVKLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
D++ P +SVIACNTA TL+ D LR FP F+G VPA+K AA T+SGL+S+L+TP T+
Sbjct: 63 DRFAPAISVIACNTASTLVIDALRERFPGHPFVGTVPAVKPAAERTRSGLVSVLATPGTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT +LI + +CH+ LV S LA E Y + E+ ++ EI CF+E EG RT
Sbjct: 123 KRQYTRDLISKWAQKCHVRLVGSDRLAGLAEVYMREGFVDEEAVRAEIAPCFMEHEGLRT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D++VLACTHYP +V+ R+ +PWPVDW+D +++IARRA LLP ++ + D A+F
Sbjct: 183 DIVVLACTHYPFLVNRMRKTAPWPVDWIDPAEAIARRALSLLPPVDGALPQGEPDIAVFT 242
Query: 253 SGKPDIAMRRLMQGFGLK 270
SGK D A+ RLMQGFGL
Sbjct: 243 SGKTDFAIGRLMQGFGLS 260
>gi|254819168|ref|ZP_05224169.1| glutamate racemase [Mycobacterium intracellulare ATCC 13950]
Length = 271
Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats.
Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 8/256 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ +FDSG+GGL V + + +P+ IYV D PYG ++ + + D L
Sbjct: 7 PVGVFDSGVGGLTVARAIIDQLPDEDIIYVGDTGHGPYGPLTIPDVRAHALAIGDD-LVG 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
VIACNTA + R + +PA+++A A T++G I ++ T AT+
Sbjct: 66 RGVKALVIACNTASAACLRDARERYDVPVVEVILPAVRRAVATTRNGRIGVIGTQATINS 125
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + I V+ VE + ++ EG + + D
Sbjct: 126 HAYQDAFAA-ARDTEITAVACPRFVDFVERGVTSGR----QVLGLAEGYLEPLQRAQVDT 180
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHALFL 252
+VL CTHYPL+ + + V + +++ A+ +L + +
Sbjct: 181 LVLGCTHYPLLSGLIQLAMGEHVTLVSSAEETAKEVLRVLTERDLLRPHDAPPATRVFEA 240
Query: 253 SGKPDIAMRRLMQGFG 268
+G PD R + G
Sbjct: 241 TGDPDAFTRLAARFLG 256
>gi|332800387|ref|YP_004461886.1| glutamate racemase [Tepidanaerobacter sp. Re1]
gi|332698122|gb|AEE92579.1| Glutamate racemase [Tepidanaerobacter sp. Re1]
Length = 269
Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats.
Identities = 60/256 (23%), Positives = 105/256 (41%), Gaps = 6/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSGIGGL V ++ L+P+ + +Y D PYG + + L
Sbjct: 5 NKPIGVFDSGIGGLTVAGEIMKLLPKENIVYFGDTARVPYGPKSSEVVTQFAFEGL-RFL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
L VIACNT D+L ++ P P + A A T++ ++ ++ T T+
Sbjct: 64 LGKDVKLIVIACNTVSATCLDKLCASSPVPVIGVIEPGARAAVAATENQVVGVIGTERTI 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IH+ Q IH + + VE ++ + + + +
Sbjct: 124 KSCAYERAIHALNKQIKIHSKACPLFVPLVE----EGWLENEAAFYTAKTYLESLKKQGI 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-HALF 251
D +VLACTHYPL+ ++ V +D++ AR + +L N + + F
Sbjct: 180 DTLVLACTHYPLLKLTLGKVMGETVRLVDSAWETAREVQRILIDKNLKRQDNSPAFYQYF 239
Query: 252 LSGKPDIAMRRLMQGF 267
+S P+ ++
Sbjct: 240 VSDNPEKFVQVGENFL 255
>gi|227504002|ref|ZP_03934051.1| glutamate racemase [Corynebacterium striatum ATCC 6940]
gi|227199396|gb|EEI79444.1| glutamate racemase [Corynebacterium striatum ATCC 6940]
Length = 258
Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats.
Identities = 60/256 (23%), Positives = 101/256 (39%), Gaps = 7/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I IFDSG+GGL V + + +P IY+ D PYG +++ + + L
Sbjct: 6 SPIGIFDSGVGGLTVARTIIEQLPNESVIYIGDTEHSPYGPRPIAEVRELSTKIADE-LV 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ + VIACNTA + R + PA+++A A T++G I ++ T T+
Sbjct: 65 ERGCKMIVIACNTATAAFLHDARERYDIPVVEVIRPAVRRAIATTRNGKIGVIGTEGTVN 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+L H V+ VE + +I EG + D
Sbjct: 125 SGAYQDLFAV-NPHVEAHAVACPDFVGFVERGITAGR----QILGVAEGYLAPLQSVGVD 179
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA-LFL 252
+VL CTHYPL+ V + V + +++ A+ L + +
Sbjct: 180 TLVLGCTHYPLLTGVIQLAMGDNVTLVSSAEETAKDVMRTLTETDMLAPEGQEAVRKFES 239
Query: 253 SGKPDIAMRRLMQGFG 268
+G P+ R + G
Sbjct: 240 TGDPETFSRLATRFLG 255
>gi|228476470|ref|ZP_04061160.1| glutamate racemase [Streptococcus salivarius SK126]
gi|228251891|gb|EEK10937.1| glutamate racemase [Streptococcus salivarius SK126]
Length = 271
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 57/258 (22%), Positives = 102/258 (39%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V+++++ +P +Y+ D PYG +++ L L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELKRQLPHESIVYIGDSARAPYGPRPAEQIRQYTWQLV-KFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA ++ +E++ +P A +QSG I ++ TP T+
Sbjct: 62 LTKDVKMIVIACNTATAVVWEEIKGALDIPVLGVVLPGSSAAIKSSQSGHIGVIGTPMTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I Q ++ +S A VE + + + + + +
Sbjct: 122 ASNIYEQKIKHLAPQMNVLSLSCPRFAPIVESNEINSSVAKKIVYESMAPLVGK-----V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--AL 250
D +VL CTHYPL+ + + + V +D+ R LL +++R +D
Sbjct: 177 DTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAETVRDVSVLLNYFEINRSREVEDKTEEY 236
Query: 251 FLSGKPDIAMRRLMQGFG 268
+ + Q G
Sbjct: 237 YTTASVLGFKEIAEQWLG 254
>gi|153208641|ref|ZP_01946893.1| glutamate racemase [Coxiella burnetii 'MSU Goat Q177']
gi|165919769|ref|ZP_02219512.1| glutamate racemase [Coxiella burnetii RSA 334]
gi|212218133|ref|YP_002304920.1| glutamate racemase [Coxiella burnetii CbuK_Q154]
gi|120575827|gb|EAX32451.1| glutamate racemase [Coxiella burnetii 'MSU Goat Q177']
gi|165916852|gb|EDR35456.1| glutamate racemase [Coxiella burnetii RSA 334]
gi|212012395|gb|ACJ19775.1| glutamate racemase [Coxiella burnetii CbuK_Q154]
Length = 280
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 62/260 (23%), Positives = 116/260 (44%), Gaps = 4/260 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K I +FDSG+GGL VL+++ +P +IY+ D PYG + + + S
Sbjct: 1 MKNGRPIGVFDSGMGGLTVLRELVNHLPNESYIYLGDTARLPYGTKSPETVSRYATQMAS 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
IL L V+ACNTA T +L+ FP + +G V P + A T++ +++L+T
Sbjct: 61 -ILIAQNIKLLVVACNTASTAALPQLQQQFPHIPIIGVVEPGARAAVVATKNNKVALLAT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ N + + Q I + + + EE +I KK +E
Sbjct: 120 ETTIQSGIYQNTLRALSPQIEITTQTCGLFVALAEEGCTNDEIALLVAKKYLEPIINVY- 178
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
+ D ++L CTH+P+++ + ++ ++++ + A + +L + N
Sbjct: 179 -HQCDSVILGCTHFPVLMEPLAAILGDQINIINSAKATATEVQSILQKNNPTPLDHPPTL 237
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+ ++ P+ R FG
Sbjct: 238 SFLVTDSPERFTRIGEIFFG 257
>gi|312135723|ref|YP_004003061.1| glutamate racemase [Caldicellulosiruptor owensensis OL]
gi|311775774|gb|ADQ05261.1| glutamate racemase [Caldicellulosiruptor owensensis OL]
Length = 267
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 56/255 (21%), Positives = 94/255 (36%), Gaps = 7/255 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL V +++ LMP +Y D PYG+ + K M + L
Sbjct: 4 RPIGIFDSGLGGLTVFKEIVSLMPNESIVYFGDTARIPYGSKSKETVTKFAMQN-TRFLL 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ V+ACNTA + L++ F P + A T++ I ++ T T+
Sbjct: 63 SKNVKIVVVACNTASAYAYEALKAKFDIPIVAVIEPGAEAAVRATKNKKIGVIGTEGTIA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I S + + VE ++ + E K D
Sbjct: 123 SGSFEKKILELDSSIKVFSKPCPLFVPLVE----EGWTDKEVTYLVAKEYLEEFIEKEID 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALFL 252
+VL CTHYP + V +++ P V ++ + A+R +L + + + +
Sbjct: 179 TLVLGCTHYPFLQDVIKKVLPD-VILINPARETAKRVFEVLKENDILNSSCEEPTYYFYA 237
Query: 253 SGKPDIAMRRLMQGF 267
S
Sbjct: 238 SDNLKKFESVASIFL 252
>gi|218245461|ref|YP_002370832.1| glutamate racemase [Cyanothece sp. PCC 8801]
gi|226722982|sp|B7JWN0|MURI_CYAP8 RecName: Full=Glutamate racemase
gi|218165939|gb|ACK64676.1| glutamate racemase [Cyanothece sp. PCC 8801]
Length = 281
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 58/257 (22%), Positives = 105/257 (40%), Gaps = 7/257 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL VL+++ +P+ +Y AD PYGN + + + + +
Sbjct: 6 NSPIGVFDSGVGGLTVLRELYRQLPQESMLYFADTARLPYGNRSGAEILQYVREILVWM- 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + ++ACNT+ L D +RS F +P + A Q I ++STPAT
Sbjct: 65 SQQNVKMVIMACNTSSALALDIVRSEFNFPILGVILPGARAAVK--QGQRIGVISTPATA 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I + + V +E +I + K+ +
Sbjct: 123 KSNAYRQAIQEINPKAQVWQVGCAEFVPLIE----ANRIHDPYTKQVAWKYLAPLLAQNI 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +V CTHY + +F+++ P V+ +D ++ + A+ L + +
Sbjct: 179 DTLVYGCTHYRHLSPIFQEIIPPTVNLIDPANFVVAAAKKELELMGLRHNEPPLPTRFAV 238
Query: 253 SGKPDIAMRRLMQGFGL 269
SG P + Q G
Sbjct: 239 SGCPQTFSQISQQWLGY 255
>gi|305680741|ref|ZP_07403548.1| glutamate racemase [Corynebacterium matruchotii ATCC 14266]
gi|305658946|gb|EFM48446.1| glutamate racemase [Corynebacterium matruchotii ATCC 14266]
Length = 288
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 61/269 (22%), Positives = 104/269 (38%), Gaps = 14/269 (5%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
MKI N + I IFDSG+GGL V + + +P Y+ D PYG +
Sbjct: 21 MKITN-------NSPIGIFDSGVGGLTVARTIMEQLPGESITYIGDTAHSPYGPLPIAEV 73
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+K + + + L + + VIACNTA + R + PA+++A A T++
Sbjct: 74 RKHALRIADE-LVERGSKMLVIACNTASAACLRDARERYDVPVIEVIHPAVRRAVATTRN 132
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G I ++ T T+ +L I + VE + +I
Sbjct: 133 GRIGVIGTSGTINSGAYQDLFSV-NPNVEITAQACPRFVDFVERGITSGR----QILGVA 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ + D +VL CTHYPL+ V + V + +++ A+ L +
Sbjct: 188 QAYIEPLQTAGVDTLVLGCTHYPLLSGVIQLAIGDNVTLVSSAEETAKDVLKQLSTTDML 247
Query: 241 QT-RVFDDHALFLSGKPDIAMRRLMQGFG 268
H +G P++ + + G
Sbjct: 248 ADESTTPTHHFESTGDPELFSQLAKRFLG 276
>gi|256396658|ref|YP_003118222.1| glutamate racemase [Catenulispora acidiphila DSM 44928]
gi|256362884|gb|ACU76381.1| glutamate racemase [Catenulispora acidiphila DSM 44928]
Length = 295
Score = 242 bits (619), Expect = 3e-62, Method: Composition-based stats.
Identities = 55/258 (21%), Positives = 97/258 (37%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG GGL V++ + +P Y D PYG ++ + L
Sbjct: 15 DAPIGIFDSGFGGLTVVRALLDQLPHEAVSYFGDTARAPYGPRPIAQVRAYALECMDK-L 73
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACN+A + + R + PA++ A A T++ + ++ST +T
Sbjct: 74 VESGVKMLVIACNSASGAVLRDARERYEIPVVEVIRPAVRLAVAATRNQHVGVISTRSTR 133
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R + + Q + VE +E+ K
Sbjct: 134 RSMAYVDAFAA-APQIQLTTQECPRFVEFVEAGETAG----EELLKVAREYLDPVAAAGV 188
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFDDHAL 250
D ++L CTHYPL+ V + V +++++ A+ +L + H
Sbjct: 189 DTLILGCTHYPLLTGVISYVMGEDVILINSAEETAKDVFRVLAENALMRPGDLPEPAHTF 248
Query: 251 FLSGKPDIAMRRLMQGFG 268
+G PD ++ + G
Sbjct: 249 TTTGDPDQFLQIGQRFLG 266
>gi|154503523|ref|ZP_02040583.1| hypothetical protein RUMGNA_01347 [Ruminococcus gnavus ATCC 29149]
gi|153795623|gb|EDN78043.1| hypothetical protein RUMGNA_01347 [Ruminococcus gnavus ATCC 29149]
Length = 276
Score = 242 bits (619), Expect = 3e-62, Method: Composition-based stats.
Identities = 60/257 (23%), Positives = 104/257 (40%), Gaps = 8/257 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+K + I +FDSG+GGL V++++ +P + +Y D PYG+ + + +
Sbjct: 6 EKKKAPIGVFDSGVGGLTVVREITRQLPHENIVYFGDTARVPYGSKSKSNIIRFSEQII- 64
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L Q VIACNTA L D +R F VP + A T +G I ++ T
Sbjct: 65 RFLKTKQVKAIVIACNTASALALDAVRDEFDIPIIGVIVPGARAAVEATANGEIGVVGTD 124
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT++ + +IH H+ + + VEE + E+ IE +
Sbjct: 125 ATVKSGTYTKVIHQMDPNIHVREKACPLFVPLVEEGFKEHVVTEEV----IEYYLESLKH 180
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--- 246
D ++L CTHYPL+ R + ++ + A + LL +
Sbjct: 181 TEIDAMILGCTHYPLLRSKIRSYMGERIQIVNPAYETAMDLKRLLQSEDMENDGEEGTSS 240
Query: 247 DHALFLSGKPDIAMRRL 263
+ ++S + +
Sbjct: 241 KYEFYVSDAAEKFVNFA 257
>gi|307707605|ref|ZP_07644086.1| glutamate racemase [Streptococcus mitis NCTC 12261]
gi|307616318|gb|EFN95510.1| glutamate racemase [Streptococcus mitis NCTC 12261]
Length = 264
Score = 242 bits (619), Expect = 3e-62, Method: Composition-based stats.
Identities = 54/257 (21%), Positives = 102/257 (39%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P +Y+ D PYG +++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIREYTWQLVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNTA ++ +E+++ +P A +Q G I ++ TP T+
Sbjct: 63 TK-DVKMIVIACNTATAVVWEEIKAQLDIPVLGVILPGASAAIKSSQGGKIGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
IH + ++ A VE A + + + + + +
Sbjct: 122 HSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLRPLVGK-----V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HAL 250
D ++L CTHYPL+ + + + V +D+ R LL ++ R H
Sbjct: 177 DSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINRGRDAGPLHHRF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
+ + + +
Sbjct: 237 YTTASSQSFAQIGEEWL 253
>gi|293364220|ref|ZP_06610946.1| glutamate racemase [Streptococcus oralis ATCC 35037]
gi|307702427|ref|ZP_07639383.1| glutamate racemase [Streptococcus oralis ATCC 35037]
gi|291317066|gb|EFE57493.1| glutamate racemase [Streptococcus oralis ATCC 35037]
gi|307624009|gb|EFO02990.1| glutamate racemase [Streptococcus oralis ATCC 35037]
Length = 264
Score = 242 bits (619), Expect = 3e-62, Method: Composition-based stats.
Identities = 54/257 (21%), Positives = 104/257 (40%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P +Y+ D PYG +++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIREYTWQLVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNTA ++ +E+++ +P A +Q G I ++ TP T+
Sbjct: 63 TK-DVKMIVIACNTATAVVWEEIKAKLDIPVLGVILPGASAAIKSSQGGKIGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IH + ++ A VE A + + + + + +
Sbjct: 122 QSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLRPLVGK-----V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHAL 250
D ++L CTHYPL+ + + + V +D+ R LL +++R H
Sbjct: 177 DSLILGCTHYPLLRSIIQNVMGPDVKLIDSGAECVRDISVLLNYFEINRSRDAGPLQHRF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
+ + + +
Sbjct: 237 YTTASSQSFAQIGEEWL 253
>gi|194397943|ref|YP_002038470.1| glutamate racemase [Streptococcus pneumoniae G54]
gi|226707591|sp|B5E1Z3|MURI_STRP4 RecName: Full=Glutamate racemase
gi|194357610|gb|ACF56058.1| glutamate racemase [Streptococcus pneumoniae G54]
Length = 264
Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats.
Identities = 54/257 (21%), Positives = 103/257 (40%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P +Y+ D PYG +++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIREYTWQLVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNTA ++ +E+++ +P A +Q G I ++ TP T+
Sbjct: 63 TK-DVKMIVIACNTATAVVWEEIKAQLDIPVLGVILPGASAAIKSSQGGKIGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IH + ++ A VE A + + + + + +
Sbjct: 122 QSDIYRKKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLRPLVGK-----V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HAL 250
D ++L CTHYPL+ + + + V +D+ R LL ++ R H
Sbjct: 177 DSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINRGRDAGPLHHRF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
+ + + +
Sbjct: 237 YTTASSQSFAQIGEEWL 253
>gi|260460843|ref|ZP_05809093.1| glutamate racemase [Mesorhizobium opportunistum WSM2075]
gi|259033420|gb|EEW34681.1| glutamate racemase [Mesorhizobium opportunistum WSM2075]
Length = 275
Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats.
Identities = 131/257 (50%), Positives = 182/257 (70%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
IL+FDSG+GGL VL++ R LMP+ F+YVADD FP+G WE+ AL+ ++ LF+ +L
Sbjct: 3 DQPILMFDSGVGGLTVLREARVLMPDRRFVYVADDAAFPFGAWEEPALRTHILELFARLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
D++ PV+SVIACNTA TL+ D LR FP F+G VPA+K AA T+SGL+S+L+TP T+
Sbjct: 63 DRFSPVISVIACNTASTLVIDALRDRFPGHPFVGTVPAVKPAAERTRSGLVSVLATPGTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT +LI + +CH+ LV S LA E Y + E+ ++ EI CF+E +G+RT
Sbjct: 123 KRQYTRDLISKWAQKCHVRLVGSDRLAGLAEAYMREGFVDEEAVRAEITPCFMEHDGRRT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D++VLACTHYP +V+ R+ +PWPVDW+D +++IARRA LLP ++ + D A+F
Sbjct: 183 DIVVLACTHYPFLVNRMRKTAPWPVDWIDPAEAIARRALSLLPPVDGALPQGEPDIAVFT 242
Query: 253 SGKPDIAMRRLMQGFGL 269
SGK D A+ RLMQGFGL
Sbjct: 243 SGKADFAVSRLMQGFGL 259
>gi|322391355|ref|ZP_08064825.1| glutamate racemase [Streptococcus peroris ATCC 700780]
gi|321145781|gb|EFX41172.1| glutamate racemase [Streptococcus peroris ATCC 700780]
Length = 264
Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats.
Identities = 56/257 (21%), Positives = 103/257 (40%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P +Y+ D PYG +++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIREYTWQLVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNTA ++ +E++S +P A +Q G I ++ TP T+
Sbjct: 63 TK-DVKMIVIACNTATAVVWEEIKSKLDIPVLGVILPGASAAIKASQGGKIGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IH + +S A VE A + + + + + +
Sbjct: 122 QSDIYRQKIHDLDPNLQVESLSCPKFAPLVESGALSTSVTKKVVYETLRPLVGK-----V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHAL 250
D ++L CTHYPL+ + + + V +D+ R LL ++ R H
Sbjct: 177 DSLILGCTHYPLLRPIIQNVMGPDVKLIDSGAECVRDISVLLNYFEINRGRDVGPLQHRF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
+ + + +
Sbjct: 237 YTTANSQSFAQIGAEWL 253
>gi|331089823|ref|ZP_08338716.1| glutamate racemase [Lachnospiraceae bacterium 3_1_46FAA]
gi|330403520|gb|EGG83078.1| glutamate racemase [Lachnospiraceae bacterium 3_1_46FAA]
Length = 275
Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats.
Identities = 56/261 (21%), Positives = 102/261 (39%), Gaps = 12/261 (4%)
Query: 10 KKLQ----NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
++ + +FDSG+GGL V +++ +P + +Y D PYG+ + + +
Sbjct: 1 MQMDCKKTAPVGVFDSGVGGLTVAREISRQLPNENIVYFGDTARVPYGSKSQNTIIRFSE 60
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI 125
+ L Q VIACNTA L D +R F +P + A T++ + +
Sbjct: 61 QII-RFLKTKQVKAIVIACNTASALALDAVRDEFDIPIMGVVIPGARAAVETTRNQKVGV 119
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
+ T AT++ + +I S + + + VEE + E+ IE
Sbjct: 120 IGTDATVQSGMYTKVIQSMAPDIEVIEKACPLFVPLVEEGFKEHVVTEEV----IEYYLE 175
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+ D ++L CTHYPL+ R + ++ + A + LL
Sbjct: 176 SMRHTQIDAMILGCTHYPLLRSKIRDYLGEEIKIVNPAYETAMDLKKLLYEKEMANDGTD 235
Query: 246 DDH---ALFLSGKPDIAMRRL 263
H + ++S + R
Sbjct: 236 AQHSVYSFYVSDAAEKFRRFA 256
>gi|15901709|ref|NP_346313.1| glutamate racemase [Streptococcus pneumoniae TIGR4]
gi|15903738|ref|NP_359288.1| glutamate racemase [Streptococcus pneumoniae R6]
gi|111657289|ref|ZP_01408054.1| hypothetical protein SpneT_02001506 [Streptococcus pneumoniae
TIGR4]
gi|116516596|ref|YP_817111.1| glutamate racemase [Streptococcus pneumoniae D39]
gi|148993339|ref|ZP_01822879.1| glutamate racemase [Streptococcus pneumoniae SP9-BS68]
gi|148998745|ref|ZP_01826183.1| glutamate racemase [Streptococcus pneumoniae SP11-BS70]
gi|149006464|ref|ZP_01830163.1| glutamate racemase [Streptococcus pneumoniae SP18-BS74]
gi|149011254|ref|ZP_01832501.1| glutamate racemase [Streptococcus pneumoniae SP19-BS75]
gi|149025005|ref|ZP_01836385.1| glutamate racemase [Streptococcus pneumoniae SP23-BS72]
gi|168483413|ref|ZP_02708365.1| glutamate racemase [Streptococcus pneumoniae CDC1873-00]
gi|168487311|ref|ZP_02711819.1| glutamate racemase [Streptococcus pneumoniae CDC1087-00]
gi|168489841|ref|ZP_02714040.1| glutamate racemase [Streptococcus pneumoniae SP195]
gi|168491804|ref|ZP_02715947.1| glutamate racemase [Streptococcus pneumoniae CDC0288-04]
gi|168494203|ref|ZP_02718346.1| glutamate racemase [Streptococcus pneumoniae CDC3059-06]
gi|168574930|ref|ZP_02720893.1| glutamate racemase [Streptococcus pneumoniae MLV-016]
gi|169833125|ref|YP_001695247.1| glutamate racemase [Streptococcus pneumoniae Hungary19A-6]
gi|182684824|ref|YP_001836571.1| glutamate racemase [Streptococcus pneumoniae CGSP14]
gi|221232616|ref|YP_002511770.1| glutamate racemase [Streptococcus pneumoniae ATCC 700669]
gi|225855314|ref|YP_002736826.1| glutamate racemase [Streptococcus pneumoniae JJA]
gi|225857468|ref|YP_002738979.1| glutamate racemase [Streptococcus pneumoniae P1031]
gi|225859643|ref|YP_002741153.1| glutamate racemase [Streptococcus pneumoniae 70585]
gi|225861674|ref|YP_002743183.1| glutamate racemase [Streptococcus pneumoniae Taiwan19F-14]
gi|298230339|ref|ZP_06964020.1| glutamate racemase [Streptococcus pneumoniae str. Canada MDR_19F]
gi|298503608|ref|YP_003725548.1| glutamate racemase [Streptococcus pneumoniae TCH8431/19A]
gi|303254610|ref|ZP_07340712.1| glutamate racemase [Streptococcus pneumoniae BS455]
gi|303258827|ref|ZP_07344807.1| glutamate racemase [Streptococcus pneumoniae SP-BS293]
gi|303261990|ref|ZP_07347936.1| glutamate racemase [Streptococcus pneumoniae SP14-BS292]
gi|303263853|ref|ZP_07349775.1| glutamate racemase [Streptococcus pneumoniae BS397]
gi|303265612|ref|ZP_07351511.1| glutamate racemase [Streptococcus pneumoniae BS457]
gi|303269880|ref|ZP_07355623.1| glutamate racemase [Streptococcus pneumoniae BS458]
gi|307068494|ref|YP_003877460.1| glutamate racemase [Streptococcus pneumoniae AP200]
gi|307128076|ref|YP_003880107.1| glutamate racemase [Streptococcus pneumoniae 670-6B]
gi|307710764|ref|ZP_07647192.1| glutamate racemase [Streptococcus mitis SK321]
gi|54037869|sp|P63641|MURI_STRR6 RecName: Full=Glutamate racemase
gi|54041262|sp|P63640|MURI_STRPN RecName: Full=Glutamate racemase
gi|122278043|sp|Q04IS7|MURI_STRP2 RecName: Full=Glutamate racemase
gi|229486278|sp|B1I891|MURI_STRPI RecName: Full=Glutamate racemase
gi|229486279|sp|B2ISX9|MURI_STRPS RecName: Full=Glutamate racemase
gi|254766126|sp|C1C9E7|MURI_STRP7 RecName: Full=Glutamate racemase
gi|254766127|sp|B8ZNI5|MURI_STRPJ RecName: Full=Glutamate racemase
gi|254766129|sp|C1CGA5|MURI_STRZJ RecName: Full=Glutamate racemase
gi|254766130|sp|C1CMJ1|MURI_STRZP RecName: Full=Glutamate racemase
gi|254766131|sp|C1CTB1|MURI_STRZT RecName: Full=Glutamate racemase
gi|14973385|gb|AAK75953.1| glutamate racemase [Streptococcus pneumoniae TIGR4]
gi|15459371|gb|AAL00499.1| Glutamate racemase [Streptococcus pneumoniae R6]
gi|116077172|gb|ABJ54892.1| glutamate racemase [Streptococcus pneumoniae D39]
gi|147755439|gb|EDK62488.1| glutamate racemase [Streptococcus pneumoniae SP11-BS70]
gi|147761762|gb|EDK68725.1| glutamate racemase [Streptococcus pneumoniae SP18-BS74]
gi|147764244|gb|EDK71175.1| glutamate racemase [Streptococcus pneumoniae SP19-BS75]
gi|147928106|gb|EDK79125.1| glutamate racemase [Streptococcus pneumoniae SP9-BS68]
gi|147929498|gb|EDK80493.1| glutamate racemase [Streptococcus pneumoniae SP23-BS72]
gi|168995627|gb|ACA36239.1| glutamate racemase [Streptococcus pneumoniae Hungary19A-6]
gi|172043246|gb|EDT51292.1| glutamate racemase [Streptococcus pneumoniae CDC1873-00]
gi|182630158|gb|ACB91106.1| glutamate racemase [Streptococcus pneumoniae CGSP14]
gi|183569790|gb|EDT90318.1| glutamate racemase [Streptococcus pneumoniae CDC1087-00]
gi|183571721|gb|EDT92249.1| glutamate racemase [Streptococcus pneumoniae SP195]
gi|183573878|gb|EDT94406.1| glutamate racemase [Streptococcus pneumoniae CDC0288-04]
gi|183575767|gb|EDT96295.1| glutamate racemase [Streptococcus pneumoniae CDC3059-06]
gi|183578940|gb|EDT99468.1| glutamate racemase [Streptococcus pneumoniae MLV-016]
gi|220675078|emb|CAR69656.1| glutamate racemase [Streptococcus pneumoniae ATCC 700669]
gi|225720017|gb|ACO15871.1| glutamate racemase [Streptococcus pneumoniae 70585]
gi|225723477|gb|ACO19330.1| glutamate racemase [Streptococcus pneumoniae JJA]
gi|225725094|gb|ACO20946.1| glutamate racemase [Streptococcus pneumoniae P1031]
gi|225728008|gb|ACO23859.1| glutamate racemase [Streptococcus pneumoniae Taiwan19F-14]
gi|298239203|gb|ADI70334.1| glutamate racemase [Streptococcus pneumoniae TCH8431/19A]
gi|301802572|emb|CBW35333.1| glutamate racemase [Streptococcus pneumoniae INV200]
gi|302598322|gb|EFL65366.1| glutamate racemase [Streptococcus pneumoniae BS455]
gi|302637073|gb|EFL67562.1| glutamate racemase [Streptococcus pneumoniae SP14-BS292]
gi|302640328|gb|EFL70783.1| glutamate racemase [Streptococcus pneumoniae SP-BS293]
gi|302640583|gb|EFL70987.1| glutamate racemase [Streptococcus pneumoniae BS458]
gi|302644739|gb|EFL74987.1| glutamate racemase [Streptococcus pneumoniae BS457]
gi|302646891|gb|EFL77116.1| glutamate racemase [Streptococcus pneumoniae BS397]
gi|306410031|gb|ADM85458.1| Glutamate racemase [Streptococcus pneumoniae AP200]
gi|306485138|gb|ADM92007.1| glutamate racemase [Streptococcus pneumoniae 670-6B]
gi|307617370|gb|EFN96542.1| glutamate racemase [Streptococcus mitis SK321]
gi|327390042|gb|EGE88387.1| glutamate racemase [Streptococcus pneumoniae GA04375]
gi|332072219|gb|EGI82704.1| glutamate racemase [Streptococcus pneumoniae GA17545]
gi|332072704|gb|EGI83187.1| glutamate racemase [Streptococcus pneumoniae GA17570]
gi|332073032|gb|EGI83512.1| glutamate racemase [Streptococcus pneumoniae GA41301]
gi|332199901|gb|EGJ13976.1| glutamate racemase [Streptococcus pneumoniae GA41317]
gi|332200436|gb|EGJ14509.1| glutamate racemase [Streptococcus pneumoniae GA47368]
Length = 264
Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats.
Identities = 54/257 (21%), Positives = 103/257 (40%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P +Y+ D PYG +++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIREYTWQLVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNTA ++ +E+++ +P A +Q G I ++ TP T+
Sbjct: 63 TK-DVKMIVIACNTATAVVWEEIKAQLDIPVLGVILPGASAAIKSSQGGKIGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IH + ++ A VE A + + + + + +
Sbjct: 122 QSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLRPLVGK-----V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HAL 250
D ++L CTHYPL+ + + + V +D+ R LL ++ R H
Sbjct: 177 DSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINRGRDAGPLHHRF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
+ + + +
Sbjct: 237 YTTASSQSFAQIGEEWL 253
>gi|323699601|ref|ZP_08111513.1| glutamate racemase [Desulfovibrio sp. ND132]
gi|323459533|gb|EGB15398.1| glutamate racemase [Desulfovibrio desulfuricans ND132]
Length = 279
Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats.
Identities = 63/264 (23%), Positives = 107/264 (40%), Gaps = 7/264 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ + I +FDSG+GGL VL+ +R MP +Y+ D PYG + + +
Sbjct: 4 QAKLPIGMFDSGVGGLTVLKALRERMPCEDVLYLGDTARLPYGTKSPQTVTRYGVQ-CGA 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L K L V+ACNTA + D LR P + +G V P + A T + +++++T
Sbjct: 63 ELIKRGIKLLVVACNTASAVALDALREANPGVPVIGVVDPGARAACQATTNQAVAVIATE 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
+T+ IH+ Q I + + EE + E + ++ F G
Sbjct: 123 STIAGGAYQRAIHAINPQARILGHPCPLFVALAEEGWTDGHVPEAVAARYLDPIFKPASG 182
Query: 190 KR----TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
D +VL CTH+PL+ R + P +D++ + A L R+ ++
Sbjct: 183 TEHPVIPDTLVLGCTHFPLLAPAIRNVVPEHTTIVDSAATTAETVYRELDRLGLNRPENG 242
Query: 246 -DDHALFLSGKPDIAMRRLMQGFG 268
+ R + G
Sbjct: 243 CGSTRYLTTDDVPRFARTGSRFLG 266
>gi|160881908|ref|YP_001560876.1| glutamate racemase [Clostridium phytofermentans ISDg]
gi|160430574|gb|ABX44137.1| glutamate racemase [Clostridium phytofermentans ISDg]
Length = 270
Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats.
Identities = 58/255 (22%), Positives = 101/255 (39%), Gaps = 6/255 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+++I +FDSGIGGL V +++ +P+ IY D PYG+ + +
Sbjct: 1 MSNKSAIGVFDSGIGGLTVTKEIMNQLPKEQIIYFGDTARLPYGSKSKATITMYSRQII- 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L VIACNTA + +R P K AA T++G I +++T
Sbjct: 60 RFLLTKDVKAIVIACNTASAHALETVRKEIEIPIIGVINPGAKVAAETTRNGNIGVIATE 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+R + + + + + VE I + K+ + E
Sbjct: 120 GTIRSGIYNEFLGEIRPDLRVFGKACPLFVPLVE----EGWIDDPITKEVVSRYIQELLY 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDH 248
K D ++L CTHYPL+ V R++ ++ ++ + AR + +L +H
Sbjct: 176 KDIDTLILGCTHYPLLRKVIREVVGDGIELVNPAYETARTLKHVLEEQKLLSEETTTPEH 235
Query: 249 ALFLSGKPDIAMRRL 263
F+S +
Sbjct: 236 TFFVSDGAEKFRNFA 250
>gi|307709763|ref|ZP_07646214.1| glutamate racemase [Streptococcus mitis SK564]
gi|301794843|emb|CBW37299.1| glutamate racemase [Streptococcus pneumoniae INV104]
gi|307619465|gb|EFN98590.1| glutamate racemase [Streptococcus mitis SK564]
gi|332201291|gb|EGJ15362.1| glutamate racemase [Streptococcus pneumoniae GA47901]
Length = 264
Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats.
Identities = 54/257 (21%), Positives = 103/257 (40%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P +Y+ D PYG +++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIREYTWQLVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNTA ++ +E+++ +P A +Q G I ++ TP T+
Sbjct: 63 TK-DVKMIVIACNTATAVVWEEIKAQLDIPVLGVILPGASAAIKSSQGGKIGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IH + ++ A VE A + + + + + +
Sbjct: 122 QSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLRPLVGK-----V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HAL 250
D ++L CTHYPL+ + + + V +D+ R LL ++ R H
Sbjct: 177 DSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINRGRDAGPLHHRF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
+ + + +
Sbjct: 237 YTTASSQSFAQIGEEWL 253
>gi|228476279|ref|ZP_04060981.1| glutamate racemase [Staphylococcus hominis SK119]
gi|314936670|ref|ZP_07844017.1| glutamate racemase [Staphylococcus hominis subsp. hominis C80]
gi|228269682|gb|EEK11184.1| glutamate racemase [Staphylococcus hominis SK119]
gi|313655289|gb|EFS19034.1| glutamate racemase [Staphylococcus hominis subsp. hominis C80]
Length = 265
Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats.
Identities = 56/257 (21%), Positives = 92/257 (35%), Gaps = 5/257 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K L +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIARCPYGPRPGEEVKTFTTQLANK- 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L ++ + VIACNTA + + L+ P P + A T++ + IL T T
Sbjct: 60 LMEFDIKMLVIACNTATAVALEHLQQLLPIPVIGVIEPGARTAIMTTKNQKVLILGTEGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + I ++ V+ VE+ + I
Sbjct: 120 IKSEAYRHHIKRINPNVEVYGVACPGFVPLVEQMRYDDPTITSIV---IHQTLKHWRNTD 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D ++L CTHYPL+ + + AR LL N H + H
Sbjct: 177 ADTVILGCTHYPLLYKPINDYFGGNKKVISSGLETAREVSALLTFSNEHASYTQHPKHRF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
F +G + Q
Sbjct: 237 FATGDTVHIKHIISQWL 253
>gi|331086725|ref|ZP_08335802.1| glutamate racemase [Lachnospiraceae bacterium 9_1_43BFAA]
gi|330409891|gb|EGG89326.1| glutamate racemase [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 278
Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats.
Identities = 62/269 (23%), Positives = 107/269 (39%), Gaps = 16/269 (5%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
MKI+N K I +FDSG+GGL V +++ +P +Y D PYG+ + +
Sbjct: 1 MKIEN-----KKDMPIGVFDSGVGGLTVAREIMRQLPNESIVYFGDTARVPYGSKSETTI 55
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+ + L + VIACNTA L D +R F P + A T +
Sbjct: 56 IRYSRQII-RFLLTKEVKAIVIACNTASALALDAVRKEFKIPIIGVVAPGARAAREETIN 114
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I ++ T AT++ LI + Q + + + VEE KI ++ I
Sbjct: 115 KKIGVIGTEATVKSEIYKKLIQAEDPQISVSGRACPLFVPLVEEGFAKHKIT----REVI 170
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ + D ++L CTHYPL+ R+ + ++ + A + LL
Sbjct: 171 DIYLSDMRESDIDTLILGCTHYPLLRSTIREYMGEKIHLVNPAYETAMDLKRLLEEEEML 230
Query: 241 QT------RVFDDHALFLSGKPDIAMRRL 263
+ +++ ++S D +
Sbjct: 231 RDTPVNDQEEHGEYSFYVSDAADKFKQFA 259
>gi|189485683|ref|YP_001956624.1| glutamate racemase [uncultured Termite group 1 bacterium phylotype
Rs-D17]
gi|170287642|dbj|BAG14163.1| glutamate racemase [uncultured Termite group 1 bacterium phylotype
Rs-D17]
Length = 275
Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats.
Identities = 63/257 (24%), Positives = 108/257 (42%), Gaps = 7/257 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I IFDSG GGL V+ + ++P IY D PYG+ + K + S
Sbjct: 11 NNHPIGIFDSGFGGLTVMSAITKMLPLESLIYFGDTAHVPYGSKSKDIVIKYSKEITS-F 69
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + + L VIACNTA L+ T P K A +++ I I+ T T
Sbjct: 70 LMRCKVKLIVIACNTASAFALSILQKTLKVPVIGVIEPGSKAAVYASKNKKIGIIGTEGT 129
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ I+ S+ ++ + + VEE +I + +KK IE K+
Sbjct: 130 INSKSYLREINRI-SKSKVYQQACPLFVPLVEEGWSSGEITDSIVKKYIE----PLLNKK 184
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-HAL 250
D +VL CTHYPL+ + + V ++D++ ++++ + +L +
Sbjct: 185 IDTLVLGCTHYPLLRETLEKNAGGNVVFIDSAKAVSQEVKNILKKTCILADVKGKKFLKF 244
Query: 251 FLSGKPDIAMRRLMQGF 267
++S P+ + F
Sbjct: 245 YVSDNPEKFQTIGSRFF 261
>gi|38234423|ref|NP_940190.1| glutamate racemase [Corynebacterium diphtheriae NCTC 13129]
gi|81564603|sp|Q6NFN4|MURI_CORDI RecName: Full=Glutamate racemase
gi|38200686|emb|CAE50382.1| glutamate racemase [Corynebacterium diphtheriae]
Length = 265
Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 107/258 (41%), Gaps = 7/258 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I IFDSG+GGL V + + +P IY+ D PYG +++ + + +
Sbjct: 2 NNAPIGIFDSGVGGLTVARVIMEQLPNESVIYIGDTANSPYGPKPIAQVRELSLAI-GEE 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + + VIACNTA + +LR F +PA+++A + T++G I ++ T T
Sbjct: 61 LVRRGCKMIVIACNTATSAALRDLRERFDVPVLGVILPAVRRAVSTTRNGKIGVIGTEGT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ L + +H + S VE + +I +G +
Sbjct: 121 IKSGAYQELFAA-SPSVEVHAQACPSFVSFVERGITSGR----QILGVAQGYVEPLQAAG 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTHYPL+ V + V + +++ A+ L + + F
Sbjct: 176 VDTLVLGCTHYPLLTGVIQLAMGDRVTLVSSAEETAKDVFKTLSMTDMLASEDSTPVRTF 235
Query: 252 -LSGKPDIAMRRLMQGFG 268
+G P + + + G
Sbjct: 236 ESTGDPVLFAQLAERFLG 253
>gi|325284166|ref|YP_004256707.1| Glutamate racemase [Deinococcus proteolyticus MRP]
gi|324315975|gb|ADY27090.1| Glutamate racemase [Deinococcus proteolyticus MRP]
Length = 365
Score = 242 bits (617), Expect = 4e-62, Method: Composition-based stats.
Identities = 72/280 (25%), Positives = 114/280 (40%), Gaps = 26/280 (9%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I +FDSG+GGL VL ++R +P+ F Y+AD PYG D +++ +
Sbjct: 1 MNDAAPIGVFDSGVGGLSVLAELRRALPDERFCYLADTAHLPYGTRSDDDIRRLT-EAAA 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L V+ACNTA LR TFP +G VPA+K AA T+SG+I +++TP
Sbjct: 60 RWLHGRGCKALVVACNTASAYGLQHLRGTFPEWPVVGLVPAVKPAALNTRSGVIGVMATP 119
Query: 130 ATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
ATLR + + + + L +S L VE + + +
Sbjct: 120 ATLRGSKLQQSVAEWAAPRGVQVMLTTSPKLVPLVERGEA----DSPDARALLRQLLRPL 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-- 245
D +VL CTHYP + R+ +D+ ++AR+ +L
Sbjct: 176 AEAGADQLVLGCTHYPFLSGSIRREFKDQFTLVDSGGAVARQTARVLAERGLLAPAAEPS 235
Query: 246 -----------------DDHALFLSGKPDIAMRRLMQGFG 268
+++G P A + ++Q G
Sbjct: 236 STPQPSSPQPTSLQLASPQVEYYVTGDPQAAQQIMLQLLG 275
>gi|153815937|ref|ZP_01968605.1| hypothetical protein RUMTOR_02182 [Ruminococcus torques ATCC 27756]
gi|145846756|gb|EDK23674.1| hypothetical protein RUMTOR_02182 [Ruminococcus torques ATCC 27756]
Length = 279
Score = 242 bits (617), Expect = 4e-62, Method: Composition-based stats.
Identities = 56/261 (21%), Positives = 102/261 (39%), Gaps = 12/261 (4%)
Query: 10 KKLQ----NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
++ + +FDSG+GGL V +++ +P + +Y D PYG+ + + +
Sbjct: 5 MQMDCKKTAPVGVFDSGVGGLTVAREISRQLPNENIVYFGDTARVPYGSKSQNTIIRFSE 64
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI 125
+ L Q VIACNTA L D +R F +P + A T++ + +
Sbjct: 65 QII-RFLKTKQVKAIVIACNTASALALDAVRDEFDIPIMGVVIPGARAAVETTRNQKVGV 123
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
+ T AT++ + +I S + + + VEE + E+ IE
Sbjct: 124 IGTDATVQSGMYTKVIQSMAPDIEVIEKACPLFVPLVEEGFKEHVVTEEV----IEYYLE 179
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+ D ++L CTHYPL+ R + ++ + A + LL
Sbjct: 180 SMRHTQIDAMILGCTHYPLLRSKIRDYLGEEIKIVNPAYETAMDLKKLLYEKEMANDGTD 239
Query: 246 DDH---ALFLSGKPDIAMRRL 263
H + ++S + R
Sbjct: 240 AQHSVYSFYVSDAAEKFRRFA 260
>gi|170077204|ref|YP_001733842.1| glutamate racemase [Synechococcus sp. PCC 7002]
gi|229486281|sp|B1XPV8|MURI_SYNP2 RecName: Full=Glutamate racemase
gi|169884873|gb|ACA98586.1| glutamate racemase [Synechococcus sp. PCC 7002]
Length = 279
Score = 242 bits (617), Expect = 4e-62, Method: Composition-based stats.
Identities = 57/256 (22%), Positives = 106/256 (41%), Gaps = 7/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q+ I IFDSG+GG+ VL+ + +P+ IY AD PYG+ L + + + + +
Sbjct: 6 QHPIGIFDSGLGGITVLRALYRQLPQESIIYFADTARLPYGDRSPEELIQYVREILTWM- 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + V+ACNT+ + D +RS F + +P + A +Q I +++T AT+
Sbjct: 65 EAQGVKMVVMACNTSSAIALDVIRSEFKTPVLGLILPGARGAV--SQGKRIGVIATQATV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
N I + + + +E +I + K+ ++ +
Sbjct: 123 NSGAYENAILEANPEAAVWQMPCPEFVPLIE----ANRINDPHTKRIVQKRLQPLLEQGI 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +V CTHY + V + + P V +D ++ + L + + +
Sbjct: 179 DTLVYGCTHYRHLSGVIQSILPSHVICVDPAEYVVSATEQELELMGWKNPQSPLPTRFAV 238
Query: 253 SGKPDIAMRRLMQGFG 268
SG PD + G
Sbjct: 239 SGCPDQFAQSAKGWLG 254
>gi|167765980|ref|ZP_02438033.1| hypothetical protein CLOSS21_00471 [Clostridium sp. SS2/1]
gi|317497209|ref|ZP_07955533.1| Asp/Glu/Hydantoin racemase [Lachnospiraceae bacterium 5_1_63FAA]
gi|167712337|gb|EDS22916.1| hypothetical protein CLOSS21_00471 [Clostridium sp. SS2/1]
gi|291558774|emb|CBL37574.1| glutamate racemase [butyrate-producing bacterium SSC/2]
gi|316895454|gb|EFV17612.1| Asp/Glu/Hydantoin racemase [Lachnospiraceae bacterium 5_1_63FAA]
Length = 267
Score = 242 bits (617), Expect = 4e-62, Method: Composition-based stats.
Identities = 56/250 (22%), Positives = 104/250 (41%), Gaps = 6/250 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I +FDSG+GGL V +++ +PE IY D PYG + + + + +
Sbjct: 1 MNAPIGVFDSGVGGLTVAREIMRQLPEESMIYFGDTARVPYGTKSKDTIVRYSRQIVNFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K VIACNTA L +L+ + P A T++ I I+ T AT
Sbjct: 61 LSK-GVKAVVIACNTASALALADLQELYNVPIIGMVQPGAIAAMNATKNKNIGIIGTNAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + + + + VEE +I ED + E +
Sbjct: 120 IKSGQYGQYLRKLDPSVTVVTKACPLFVPLVEEGLIDDRITED----MVSRYLREFKQYD 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHAL 250
D ++L CTHYPL+++ ++ V ++ + +A+ + +L + + + +
Sbjct: 176 IDSLILGCTHYPLLINPIQRFVGDKVTLVNPAYEVAKTLKQMLAQRDMAASEDHTAKYEY 235
Query: 251 FLSGKPDIAM 260
++S D +
Sbjct: 236 YVSDMADQFL 245
>gi|4996220|dbj|BAA78374.1| D-glutamate racemase [Corynebacterium glutamicum]
Length = 284
Score = 242 bits (617), Expect = 5e-62, Method: Composition-based stats.
Identities = 56/259 (21%), Positives = 108/259 (41%), Gaps = 9/259 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + +P IY+ D PYG +++ + + + L
Sbjct: 21 DAPIGIFDSGVGGLTVARTIIDQLPHESVIYIGDTANGPYGPLPIAKVREHAIRIADE-L 79
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACNTA + R + +PA+++A A T++G + ++ T T+
Sbjct: 80 VERGCKMIVIACNTASAAFLRDARERYSVPVVEVILPAVRRAVASTRNGKVGVIGTVGTI 139
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+L + ++ V+ VE + +I + + +
Sbjct: 140 NSGAYQDLFSA-SPSIEVNAVACPRFVDFVERGITSGR----QILNIAQDYLEPLQAEGV 194
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT---RVFDDHA 249
D +VL CTHYPL+ V + V + +++ A+ +L + + ++
Sbjct: 195 DTLVLGCTHYPLLSGVIQLAMGDHVSLVSSAEETAKDVLRILSQQDLLADPDMHPEPSYS 254
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+G P+I + + G
Sbjct: 255 FESTGDPEIFAQLSRRFLG 273
>gi|322387113|ref|ZP_08060724.1| glutamate racemase [Streptococcus infantis ATCC 700779]
gi|321142100|gb|EFX37594.1| glutamate racemase [Streptococcus infantis ATCC 700779]
Length = 264
Score = 242 bits (617), Expect = 5e-62, Method: Composition-based stats.
Identities = 55/257 (21%), Positives = 103/257 (40%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P +Y+ D PYG +++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIREYTWQLVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNTA ++ +E++S +P A +Q G I ++ TP T+
Sbjct: 63 TK-DVKMIVIACNTATAVVWEEIKSKLDIPVLGVILPGASAAIKTSQGGRIGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IH + ++ A VE A + + + + + +
Sbjct: 122 QSDIYRQKIHDLDPNLQVESLACPKFAPLVESGALSTSVTKKVVYETLRPLVGK-----V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHAL 250
D ++L CTHYPL+ + + + V +D+ R LL ++ R H
Sbjct: 177 DSLILGCTHYPLLRPIIQNVMGPEVKLIDSGAECVRDISVLLNYFEINRGRDAGPLQHRF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
+ + + +
Sbjct: 237 YTTANSHSFAQIGAEWL 253
>gi|149924170|ref|ZP_01912547.1| glutamate racemase [Plesiocystis pacifica SIR-1]
gi|149814971|gb|EDM74531.1| glutamate racemase [Plesiocystis pacifica SIR-1]
Length = 276
Score = 242 bits (617), Expect = 5e-62, Method: Composition-based stats.
Identities = 64/259 (24%), Positives = 105/259 (40%), Gaps = 3/259 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I +FDSG+GGL VL+ +R +P FIY+ D PYG + + +
Sbjct: 6 NDAPIGVFDSGVGGLTVLRALRRRLPNERFIYLGDTARLPYGTKSPETVARYAEKAAG-V 64
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPA 130
L + L VIACNTA + L F + +G + P A A T+S + ++ T
Sbjct: 65 LVERGIKLLVIACNTASAVAVSRLAERFAPVPVIGVIEPGAWAACAATRSDRVLVIGTEG 124
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ I + V+ + + EE I E ++ + E +
Sbjct: 125 TINGGAYQRAIARRRPAIVVRSVACPLFVALAEEGWVRGPIPEAIARRYLAVELSGNEDE 184
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-HA 249
R D +VL CTH+P++ V +++ V +D++++ A L R + D
Sbjct: 185 RVDTLVLGCTHFPVLRGVLQEVCGPEVSLVDSAETTATSVARALEREGLAAGQGGGDSLH 244
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+ PD R G
Sbjct: 245 FLATDAPDRFARVGSVFLG 263
>gi|134299103|ref|YP_001112599.1| glutamate racemase [Desulfotomaculum reducens MI-1]
gi|134051803|gb|ABO49774.1| glutamate racemase [Desulfotomaculum reducens MI-1]
Length = 282
Score = 242 bits (617), Expect = 5e-62, Method: Composition-based stats.
Identities = 65/256 (25%), Positives = 111/256 (43%), Gaps = 7/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL V + +R L+P IY AD PYG+ + +++R + L
Sbjct: 18 RAPIGVFDSGVGGLSVARDIRKLLPLEDIIYYADSAYCPYGDKDPQTIRQR-EKAIGEFL 76
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
L V+ACNTA + + LR + +G P +K A A T++G I +L+T T+
Sbjct: 77 VSQGCKLIVVACNTASSAGLEYLRRFLK-VPVVGMEPGVKPAVAATRNGKIGVLATCVTI 135
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
S+L+ Y + + L +E E++++ K+
Sbjct: 136 AGDRFSSLVKRYAEETEVITQPCPGLVELIESGKLNAPETEEKLRT----FLQPILDKKA 191
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHALF 251
D IVL CTHYP + + L+ V +D ++A++ +L N + +
Sbjct: 192 DTIVLGCTHYPFLRPMLESLAGPGVSVIDTGQAVAKQVSRVLSACNLAKNSGPLGTEQFY 251
Query: 252 LSGKPDIAMRRLMQGF 267
SG + +
Sbjct: 252 TSGNQTEVEEVIRTLW 267
>gi|317500702|ref|ZP_07958920.1| glutamate racemase [Lachnospiraceae bacterium 8_1_57FAA]
gi|316897896|gb|EFV19949.1| glutamate racemase [Lachnospiraceae bacterium 8_1_57FAA]
Length = 273
Score = 242 bits (617), Expect = 5e-62, Method: Composition-based stats.
Identities = 56/252 (22%), Positives = 100/252 (39%), Gaps = 8/252 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ +FDSG+GGL V +++ +P + +Y D PYG+ + + + + L
Sbjct: 8 PVGVFDSGVGGLTVAREISRQLPNENIVYFGDTARVPYGSKSQNTIIRFSEQII-RFLKT 66
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
Q VIACNTA L D +R F +P + A T++ + ++ T AT++
Sbjct: 67 KQVKAIVIACNTASALALDAVRDEFDIPIMGVVIPGARAAVETTRNQKVGVIGTDATVQS 126
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ +I S + + + VEE + E+ IE + D
Sbjct: 127 GMYTKVIQSMAPDIEVIEKACPLFVPLVEEGFKEHVVTEEV----IEYYLESMRHTQIDA 182
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH---ALF 251
++L CTHYPL+ R + ++ + A + LL H + +
Sbjct: 183 MILGCTHYPLLRSKIRDYLGEEIKIVNPAYETAMDLKKLLYEKEMANDGTDAQHSVYSFY 242
Query: 252 LSGKPDIAMRRL 263
+S + R
Sbjct: 243 VSDAAEKFRRFA 254
>gi|302529722|ref|ZP_07282064.1| glutamate racemase [Streptomyces sp. AA4]
gi|302438617|gb|EFL10433.1| glutamate racemase [Streptomyces sp. AA4]
Length = 266
Score = 242 bits (617), Expect = 5e-62, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 102/258 (39%), Gaps = 7/258 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL V + + L+P YV D PYG ++ + D++
Sbjct: 5 DAPIGVFDSGVGGLTVARSILELLPAEQLRYVGDTARNPYGPLPIATAREYALAALDDMV 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA + R + +PA ++AA T +G + ++ T T+
Sbjct: 65 ES-GVKALVIACNTASAACLRDARERYDVPVIEVVLPAARRAAVATHTGRVGLIGTEGTV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R + + + V+ VE + +I +G
Sbjct: 124 RSRAYDDAFAA-APDVRLTSVACPRFVDFVERGITTGR----QILGLAQGYLQPLLEAEV 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALF 251
D ++L CTHYPL+ V + + V + ++D A+ +L ++ R H
Sbjct: 179 DTLILGCTHYPLLSGVLQIVMGQDVTLVSSADETAKDLYRVLTELDLLAERDEPPKHEFL 238
Query: 252 LSGKPDIAMRRLMQGFGL 269
+G P+ R + G
Sbjct: 239 ATGSPEPFARLAQRFMGF 256
>gi|118588604|ref|ZP_01546012.1| glutamate racemase [Stappia aggregata IAM 12614]
gi|118438590|gb|EAV45223.1| glutamate racemase [Stappia aggregata IAM 12614]
Length = 264
Score = 242 bits (617), Expect = 5e-62, Method: Composition-based stats.
Identities = 128/261 (49%), Positives = 175/261 (67%), Gaps = 1/261 (0%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ +L FDSG+GGL VL++ R+L+P +YVADD FP G W + LK R++ LF
Sbjct: 1 MQGSGPVLFFDSGLGGLTVLREARYLLPYEPLLYVADDAAFPIGRWPEAELKARIVSLFG 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
D++ ++ P VIACNTAFTL D LR P + F+G VPAIK AA T SGLIS+L+TP
Sbjct: 61 DLIAEHGPKAVVIACNTAFTLAGDALREAHPDVPFVGTVPAIKPAAERTSSGLISVLATP 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+RRTYT +LI S+ SQCH+ LV S +LA E++ G + +D + EI CF+E++G
Sbjct: 121 GTVRRTYTRSLIDSFASQCHVRLVGSDMLAELAEKHLRGETVSDDALLPEIADCFLEQDG 180
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQTRVFDDH 248
KRTD++VLACTHYP + + FR+++PWPVDWLD +++IAR+ +L H R D
Sbjct: 181 KRTDIVVLACTHYPFLANRFRKIAPWPVDWLDPAEAIARQLVRVLGEEAARHPARNLPDR 240
Query: 249 ALFLSGKPDIAMRRLMQGFGL 269
A+F SG D + RL+ GFGL
Sbjct: 241 AIFTSGSKDPGLARLLAGFGL 261
>gi|255282581|ref|ZP_05347136.1| glutamate racemase [Bryantella formatexigens DSM 14469]
gi|255266874|gb|EET60079.1| glutamate racemase [Bryantella formatexigens DSM 14469]
Length = 275
Score = 242 bits (617), Expect = 5e-62, Method: Composition-based stats.
Identities = 57/250 (22%), Positives = 101/250 (40%), Gaps = 9/250 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ + IFDSG+GGL V +++ +PE +Y D PYG+ + + + L
Sbjct: 7 ERPVGIFDSGVGGLTVTREVMRNIPEERIVYFGDTARVPYGSKSKETILRYSRQIV-RFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
V+ACNTA +E+R P P K A A T++ I ++ T T+
Sbjct: 66 LTQDVKAIVVACNTASAFALEEIRHELPVPIIGVVRPGAKVACAATKNNRIGVIGTKGTI 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ LI + + + VEE + E+ ++ + +
Sbjct: 126 ASGLYTELIRQIKPDAEVIGKACPLFVPLVEEGMMKDTVTEEVARR----YLAGLQEQDI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV----FDDH 248
D ++L CTHYPL+ + ++ V ++ + A R LL + T + H
Sbjct: 182 DTLILGCTHYPLLRSMIGKIMGEGVTLVNPAYETACSLRTLLIQEGLQNTEPLAEGENPH 241
Query: 249 ALFLSGKPDI 258
++S P+
Sbjct: 242 RFYVSDAPES 251
>gi|29653649|ref|NP_819341.1| glutamate racemase [Coxiella burnetii RSA 493]
gi|161830181|ref|YP_001596247.1| glutamate racemase [Coxiella burnetii RSA 331]
gi|29540911|gb|AAO89855.1| glutamate racemase [Coxiella burnetii RSA 493]
gi|161762048|gb|ABX77690.1| glutamate racemase [Coxiella burnetii RSA 331]
Length = 280
Score = 242 bits (617), Expect = 5e-62, Method: Composition-based stats.
Identities = 61/260 (23%), Positives = 115/260 (44%), Gaps = 4/260 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K I +FDSG+GGL VL+++ +P +IY+ D PYG + + + S
Sbjct: 1 MKNGRPIGVFDSGMGGLTVLRELVNHLPNESYIYLGDTARLPYGTKSPETVSRYATQMAS 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
IL L V+ACNTA T +L+ F + +G V P + A T++ +++L+T
Sbjct: 61 -ILIAQNIKLLVVACNTASTAALPQLQQQFSHIPIIGVVEPGARAAVVATKNNKVALLAT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ N + + Q I + + + EE +I KK +E
Sbjct: 120 ETTIQSGIYQNTLRALSPQIEITTQTCGLFVALAEEGCTNDEIALLVAKKYLEPIINGY- 178
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
+ D ++L CTH+P+++ + ++ ++++ + A + +L + N
Sbjct: 179 -HQCDSVILGCTHFPVLMEPLAAILGDQINIINSAKATATEVQSILQKNNPTPLDHPPTL 237
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+ ++ P+ R FG
Sbjct: 238 SFLVTDSPERFTRIGEIFFG 257
>gi|83589382|ref|YP_429391.1| glutamate racemase [Moorella thermoacetica ATCC 39073]
gi|83572296|gb|ABC18848.1| glutamate racemase [Moorella thermoacetica ATCC 39073]
Length = 276
Score = 242 bits (617), Expect = 5e-62, Method: Composition-based stats.
Identities = 53/256 (20%), Positives = 95/256 (37%), Gaps = 6/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ +FDSG+GGL V +++ +P IY D PYG+ L + L
Sbjct: 5 QPVGVFDSGVGGLTVAREITRQLPAETIIYFGDTAHVPYGSRPVDELIHFADTIVG-FLI 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
V ACNT + L+ + P ++ A T++G I +++T AT+
Sbjct: 64 ARGAKAIVDACNTTSAVALPYLQQKYSIPIIGVIEPGVEAALQATKNGRIGVIATEATIA 123
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ S + + + VE + ++ + C D
Sbjct: 124 SDAHRRALLSRGKEVQVFTRACPPFVPLVEAGI----VAGPRVEGVVAECLESLLQAGID 179
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALFL 252
++L CTHYP + V + L+ V +D + + R + +L + H ++
Sbjct: 180 TLILGCTHYPFLAPVIQDLAGPGVTLVDPAAATVRELKSVLAAGGGLRGPHGSRAHEFYV 239
Query: 253 SGKPDIAMRRLMQGFG 268
SG P + G
Sbjct: 240 SGDPRSFNEVGFKLIG 255
>gi|291550542|emb|CBL26804.1| glutamate racemase [Ruminococcus torques L2-14]
Length = 273
Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats.
Identities = 56/258 (21%), Positives = 104/258 (40%), Gaps = 9/258 (3%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
KK+ I +FDSG+GGL V +++ +P + +Y D PYG+ + + + +
Sbjct: 3 NKKM-APIGVFDSGVGGLTVAREISRQLPYENIVYFGDTARVPYGSKSQNTIIRFSEQII 61
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
L Q VIACNTA L D ++ F +P + A T +G + ++ T
Sbjct: 62 -RFLRTKQVKAIVIACNTASALALDAVKDEFDLPIIGVVIPGARAAVEATTNGKVGVVGT 120
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + +I + + + + VEE + ++ IE
Sbjct: 121 EATVQSGMYTKVIQGMNPKIEVIEKACPLFVPLVEEGFKEHIVT----REIIEYYLESMR 176
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
D ++L CTHYPL+ R+ + ++ + A + LL + H
Sbjct: 177 NTDIDAMILGCTHYPLLRSKIREYMGDKIQIVNPAYETAMDLKRLLEEEEMANDETTEHH 236
Query: 249 ---ALFLSGKPDIAMRRL 263
+ ++S + +
Sbjct: 237 SEYSFYVSDAAEKFRKFA 254
>gi|218961215|ref|YP_001740990.1| Glutamate racemase [Candidatus Cloacamonas acidaminovorans]
gi|167729872|emb|CAO80784.1| Glutamate racemase [Candidatus Cloacamonas acidaminovorans]
Length = 267
Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 103/256 (40%), Gaps = 8/256 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I IFDSG+GGL V Q +R P IY D PYG + + +
Sbjct: 1 MKRAIGIFDSGVGGLTVYQAIRNTFPNEDIIYFGDTARVPYGPKSPNTIIDYSLQNA-RF 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + + ++ACNT+ + L++ P +Q+ T+ I ++ T T
Sbjct: 60 LLQQGIKILIVACNTSSAVAIPALQNLSDIPVIGVIEPGAEQSVKVTKCKRIGVIGTEGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R + I + + + + + VEE + E E E + +
Sbjct: 120 IRSGAYPSAIRKLLPEAFVVSSACPLFVPLVEEGWQEHPVAE----VIAEEYLKEMKEQN 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTHYPL+ ++ +Q+ V +D++ ++A C L N + +
Sbjct: 176 IDTLVLGCTHYPLLSNIIQQVMGEEVTLVDSAMAVAEYLSCYLSAEN---DGQKGRDSFY 232
Query: 252 LSGKPDIAMRRLMQGF 267
+S + +
Sbjct: 233 VSDNENKFAEIAERIL 248
>gi|331701298|ref|YP_004398257.1| glutamate racemase [Lactobacillus buchneri NRRL B-30929]
gi|329128641|gb|AEB73194.1| Glutamate racemase [Lactobacillus buchneri NRRL B-30929]
Length = 264
Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats.
Identities = 55/257 (21%), Positives = 102/257 (39%), Gaps = 6/257 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I + DSG+GGL VL+++ ++P +I++ D PYG ++K + L
Sbjct: 3 NRPIGVMDSGVGGLTVLKEITKILPNESYIFIGDQANLPYGQKSSETVRKLTKRIAD-YL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACNTA + L+ P P + A ++SG I +++T T+
Sbjct: 62 VEQNIKMFVIACNTATAAAYEYLKKILPIPVIGVIEPGAQMAVEASKSGEIGVIATNGTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R LI + + + VEE G E + + K
Sbjct: 122 RSGDYQRLIKQANRSAVVSSLGCPEFVTMVEEGLAGTV----EAQVAVNNRLAWFMDKPI 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-ALF 251
D +V+ CTH+P++ + + + V +D + A++ + L + +
Sbjct: 178 DTLVMGCTHFPILKNEIQNVMGNAVTLIDPGVATAQQVKAKLAAHDGFAPAQKQRVRRFY 237
Query: 252 LSGKPDIAMRRLMQGFG 268
+G P + + G
Sbjct: 238 TTGNPADFAKVADKLLG 254
>gi|15889167|ref|NP_354848.1| glutamate racemase [Agrobacterium tumefaciens str. C58]
gi|22001824|sp|Q8UE93|MURI_AGRT5 RecName: Full=Glutamate racemase
gi|15156983|gb|AAK87633.1| glutamate racemase [Agrobacterium tumefaciens str. C58]
Length = 273
Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats.
Identities = 144/257 (56%), Positives = 186/257 (72%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+L+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK R++ LF +L
Sbjct: 13 KPVLVFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEEALKTRILSLFETLLQ 72
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
Y P + +IACNTAFTL +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++
Sbjct: 73 DYSPEVCIIACNTAFTLAGADLRARFPDMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 132
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI S+ +QCH+ LV S LA E + G + ++ + EIE CFI+ +GKRTD
Sbjct: 133 RAYTRDLIQSFATQCHVRLVGSENLARMAESWIRGEPVSDEAVLAEIEPCFIDSDGKRTD 192
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++VLACTHYP + +VFR+L+PWPVDWLD +++IARRAR L+P + D A+F S
Sbjct: 193 IVVLACTHYPFMANVFRRLAPWPVDWLDPAEAIARRARHLVPLPQDAEHPDGFDFAVFTS 252
Query: 254 GKPDIAMRRLMQGFGLK 270
GKPD A RRLMQGFGL
Sbjct: 253 GKPDFATRRLMQGFGLS 269
>gi|15924141|ref|NP_371675.1| glutamate racemase [Staphylococcus aureus subsp. aureus Mu50]
gi|15926734|ref|NP_374267.1| glutamate racemase [Staphylococcus aureus subsp. aureus N315]
gi|21282762|ref|NP_645850.1| glutamate racemase [Staphylococcus aureus subsp. aureus MW2]
gi|49485988|ref|YP_043209.1| glutamate racemase [Staphylococcus aureus subsp. aureus MSSA476]
gi|57650260|ref|YP_186024.1| glutamate racemase [Staphylococcus aureus subsp. aureus COL]
gi|87161415|ref|YP_493747.1| glutamate racemase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88194852|ref|YP_499650.1| glutamate racemase [Staphylococcus aureus subsp. aureus NCTC 8325]
gi|148267642|ref|YP_001246585.1| glutamate racemase [Staphylococcus aureus subsp. aureus JH9]
gi|150393697|ref|YP_001316372.1| glutamate racemase [Staphylococcus aureus subsp. aureus JH1]
gi|151221275|ref|YP_001332097.1| glutamate racemase [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156979472|ref|YP_001441731.1| glutamate racemase [Staphylococcus aureus subsp. aureus Mu3]
gi|161509325|ref|YP_001574984.1| glutamate racemase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221140452|ref|ZP_03564945.1| glutamate racemase [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|253317067|ref|ZP_04840280.1| glutamate racemase [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|253731764|ref|ZP_04865929.1| glutamate racemase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253733613|ref|ZP_04867778.1| glutamate racemase [Staphylococcus aureus subsp. aureus TCH130]
gi|255005936|ref|ZP_05144537.2| glutamate racemase [Staphylococcus aureus subsp. aureus Mu50-omega]
gi|257795120|ref|ZP_05644099.1| glutamate racemase [Staphylococcus aureus A9781]
gi|258407172|ref|ZP_05680321.1| glutamate racemase [Staphylococcus aureus A9763]
gi|258421737|ref|ZP_05684658.1| glutamate racemase [Staphylococcus aureus A9719]
gi|258432919|ref|ZP_05688608.1| glutamate racemase [Staphylococcus aureus A9299]
gi|258443409|ref|ZP_05691752.1| glutamate racemase [Staphylococcus aureus A8115]
gi|258446082|ref|ZP_05694244.1| glutamate racemase [Staphylococcus aureus A6300]
gi|258449805|ref|ZP_05697903.1| glutamate racemase [Staphylococcus aureus A6224]
gi|258454904|ref|ZP_05702867.1| glutamate racemase [Staphylococcus aureus A5937]
gi|262048731|ref|ZP_06021613.1| glutamate racemase [Staphylococcus aureus D30]
gi|262051669|ref|ZP_06023888.1| glutamate racemase [Staphylococcus aureus 930918-3]
gi|269202763|ref|YP_003282032.1| glutamate racemase [Staphylococcus aureus subsp. aureus ED98]
gi|282894178|ref|ZP_06302409.1| glutamate racemase [Staphylococcus aureus A8117]
gi|282919928|ref|ZP_06327657.1| glutamate racemase [Staphylococcus aureus A9765]
gi|282928673|ref|ZP_06336270.1| glutamate racemase [Staphylococcus aureus A10102]
gi|284024075|ref|ZP_06378473.1| glutamate racemase [Staphylococcus aureus subsp. aureus 132]
gi|294848141|ref|ZP_06788888.1| glutamate racemase [Staphylococcus aureus A9754]
gi|295405955|ref|ZP_06815764.1| glutamate racemase [Staphylococcus aureus A8819]
gi|296275637|ref|ZP_06858144.1| glutamate racemase [Staphylococcus aureus subsp. aureus MR1]
gi|297208211|ref|ZP_06924641.1| glutamate racemase [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|300912288|ref|ZP_07129731.1| glutamate racemase [Staphylococcus aureus subsp. aureus TCH70]
gi|304381292|ref|ZP_07363945.1| glutamate racemase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|54037867|sp|P63638|MURI_STAAN RecName: Full=Glutamate racemase
gi|54037868|sp|P63639|MURI_STAAW RecName: Full=Glutamate racemase
gi|54041261|sp|P63637|MURI_STAAM RecName: Full=Glutamate racemase
gi|56749202|sp|Q6GA64|MURI_STAAS RecName: Full=Glutamate racemase
gi|71151976|sp|Q5HGT3|MURI_STAAC RecName: Full=Glutamate racemase
gi|122539773|sp|Q2FZC6|MURI_STAA8 RecName: Full=Glutamate racemase
gi|123486328|sp|Q2FHT1|MURI_STAA3 RecName: Full=Glutamate racemase
gi|166231056|sp|A7X179|MURI_STAA1 RecName: Full=Glutamate racemase
gi|172048828|sp|A6QG53|MURI_STAAE RecName: Full=Glutamate racemase
gi|189030372|sp|A6U0W7|MURI_STAA2 RecName: Full=Glutamate racemase
gi|189030373|sp|A5IS36|MURI_STAA9 RecName: Full=Glutamate racemase
gi|189030374|sp|A8Z1T2|MURI_STAAT RecName: Full=Glutamate racemase
gi|13700950|dbj|BAB42246.1| glutamate racemase [Staphylococcus aureus subsp. aureus N315]
gi|14246921|dbj|BAB57313.1| glutamate racemase [Staphylococcus aureus subsp. aureus Mu50]
gi|21204200|dbj|BAB94898.1| glutamate racemase [Staphylococcus aureus subsp. aureus MW2]
gi|49244431|emb|CAG42859.1| putative glutamate racemase [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57284446|gb|AAW36540.1| glutamate racemase [Staphylococcus aureus subsp. aureus COL]
gi|87127389|gb|ABD21903.1| glutamate racemase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202410|gb|ABD30220.1| glutamate racemase [Staphylococcus aureus subsp. aureus NCTC 8325]
gi|147740711|gb|ABQ49009.1| glutamate racemase [Staphylococcus aureus subsp. aureus JH9]
gi|149946149|gb|ABR52085.1| glutamate racemase [Staphylococcus aureus subsp. aureus JH1]
gi|150374075|dbj|BAF67335.1| glutamate racemase [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156721607|dbj|BAF78024.1| glutamate racemase [Staphylococcus aureus subsp. aureus Mu3]
gi|160368134|gb|ABX29105.1| glutamate racemase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253724493|gb|EES93222.1| glutamate racemase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253728412|gb|EES97141.1| glutamate racemase [Staphylococcus aureus subsp. aureus TCH130]
gi|257789092|gb|EEV27432.1| glutamate racemase [Staphylococcus aureus A9781]
gi|257841327|gb|EEV65772.1| glutamate racemase [Staphylococcus aureus A9763]
gi|257842070|gb|EEV66498.1| glutamate racemase [Staphylococcus aureus A9719]
gi|257849359|gb|EEV73336.1| glutamate racemase [Staphylococcus aureus A9299]
gi|257851499|gb|EEV75438.1| glutamate racemase [Staphylococcus aureus A8115]
gi|257855140|gb|EEV78081.1| glutamate racemase [Staphylococcus aureus A6300]
gi|257856725|gb|EEV79628.1| glutamate racemase [Staphylococcus aureus A6224]
gi|257862784|gb|EEV85549.1| glutamate racemase [Staphylococcus aureus A5937]
gi|259160404|gb|EEW45429.1| glutamate racemase [Staphylococcus aureus 930918-3]
gi|259163187|gb|EEW47747.1| glutamate racemase [Staphylococcus aureus D30]
gi|262075053|gb|ACY11026.1| glutamate racemase [Staphylococcus aureus subsp. aureus ED98]
gi|269940644|emb|CBI49023.1| putative glutamate racemase [Staphylococcus aureus subsp. aureus
TW20]
gi|282589712|gb|EFB94798.1| glutamate racemase [Staphylococcus aureus A10102]
gi|282594644|gb|EFB99628.1| glutamate racemase [Staphylococcus aureus A9765]
gi|282763664|gb|EFC03793.1| glutamate racemase [Staphylococcus aureus A8117]
gi|285816830|gb|ADC37317.1| Glutamate racemase [Staphylococcus aureus 04-02981]
gi|294824941|gb|EFG41363.1| glutamate racemase [Staphylococcus aureus A9754]
gi|294969390|gb|EFG45410.1| glutamate racemase [Staphylococcus aureus A8819]
gi|296886950|gb|EFH25853.1| glutamate racemase [Staphylococcus aureus subsp. aureus ATCC 51811]
gi|298694438|gb|ADI97660.1| glutamate racemase [Staphylococcus aureus subsp. aureus ED133]
gi|300886534|gb|EFK81736.1| glutamate racemase [Staphylococcus aureus subsp. aureus TCH70]
gi|302332758|gb|ADL22951.1| putative glutamate racemase [Staphylococcus aureus subsp. aureus
JKD6159]
gi|302750973|gb|ADL65150.1| putative glutamate racemase [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|304340275|gb|EFM06216.1| glutamate racemase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|312829543|emb|CBX34385.1| glutamate racemase [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315128549|gb|EFT84554.1| glutamate racemase [Staphylococcus aureus subsp. aureus CGS03]
gi|315196875|gb|EFU27218.1| glutamate racemase [Staphylococcus aureus subsp. aureus CGS01]
gi|320141035|gb|EFW32882.1| glutamate racemase [Staphylococcus aureus subsp. aureus MRSA131]
gi|320143092|gb|EFW34882.1| glutamate racemase [Staphylococcus aureus subsp. aureus MRSA177]
gi|323440701|gb|EGA98411.1| glutamate racemase [Staphylococcus aureus O11]
gi|323442356|gb|EGA99985.1| glutamate racemase [Staphylococcus aureus O46]
gi|329313818|gb|AEB88231.1| Glutamate racemase [Staphylococcus aureus subsp. aureus T0131]
gi|329725174|gb|EGG61663.1| glutamate racemase [Staphylococcus aureus subsp. aureus 21172]
gi|329728845|gb|EGG65266.1| glutamate racemase [Staphylococcus aureus subsp. aureus 21193]
gi|329730728|gb|EGG67107.1| glutamate racemase [Staphylococcus aureus subsp. aureus 21189]
Length = 266
Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 96/260 (36%), Gaps = 5/260 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARK- 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L ++ + VIACNTA + + L+ T P + A T++ + +L T T
Sbjct: 60 LMEFDIKMLVIACNTATAVALEYLQKTLSIPVIGVIEPGARTAIMTTRNQNVLVLGTEGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ I +H V+ VE+ + I
Sbjct: 120 IKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYSDPTITSIV---IHQTLKRWRNSE 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
+D ++L CTHYPL+ + + AR LL N H + DH
Sbjct: 177 SDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTEHPDHRF 236
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
F +G P + + L
Sbjct: 237 FATGDPTHITNIIKEWLNLS 256
>gi|323489950|ref|ZP_08095171.1| glutamate racemase [Planococcus donghaensis MPA1U2]
gi|323396246|gb|EGA89071.1| glutamate racemase [Planococcus donghaensis MPA1U2]
Length = 267
Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats.
Identities = 56/257 (21%), Positives = 98/257 (38%), Gaps = 6/257 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ L+P Y+ D+ PYG ++ ++
Sbjct: 1 MNAPIGVIDSGVGGLTVAKEIMKLLPNEQICYIGDNARCPYGPRPLAEVRTYTWQ-MANA 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K + VIACNTA L+ P P + A + + I++L T T
Sbjct: 60 LMKKNIKMLVIACNTATAAALYSLQKNLPIPVIGVIFPGARAAVKSSTTNKIAVLGTSGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + S VS H+ ++ VE + + ++ +
Sbjct: 120 VKSGAYEKAVLSLVSSAHVIQLACPRFVPLVESDEYEG----EFAHRIVQETLATIAYEE 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-HAL 250
D +L CTHYPL+ ++ V L +++ A+ L N R H
Sbjct: 176 FDTAILGCTHYPLLQGFIEEVLGDTVHVLSSAEETAKDVERYLHYKNQFANREKPPVHRF 235
Query: 251 FLSGKPDIAMRRLMQGF 267
+ SG I + +
Sbjct: 236 YTSGSTQIFSSIVRKWL 252
>gi|57866660|ref|YP_188316.1| glutamate racemase [Staphylococcus epidermidis RP62A]
gi|242242450|ref|ZP_04796895.1| glutamate racemase [Staphylococcus epidermidis W23144]
gi|71151977|sp|Q5HQ24|MURI_STAEQ RecName: Full=Glutamate racemase
gi|57637318|gb|AAW54106.1| glutamate racemase [Staphylococcus epidermidis RP62A]
gi|242234100|gb|EES36412.1| glutamate racemase [Staphylococcus epidermidis W23144]
gi|319401537|gb|EFV89747.1| glutamate racemase [Staphylococcus epidermidis FRI909]
Length = 267
Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 98/260 (37%), Gaps = 5/260 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +KK L
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIARCPYGPRPGEEVKKFTTELAQK- 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L ++ + VIACNTA + D L++ P P + A T++ + +L T T
Sbjct: 60 LMEFDIKMLVIACNTATAVALDYLQNILPIPVIGVIEPGARTAIMTTKNQNVLVLGTEGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ I +++ V+ VE+ + + I +
Sbjct: 120 IKSEAYRTHIKKINPNVNVYSVACPGFVPLVEQMRYKDPTITNIV---IHQTLKQWRNSD 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D ++L CTHYPL+ + + + AR LL N H + H
Sbjct: 177 ADTVILGCTHYPLLYQPIYEYFSGTKTVISSGLETAREVSALLTFSNEHASYTEHPQHRF 236
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
F +G + + +K
Sbjct: 237 FATGDTTHIKNIIDEWLNMK 256
>gi|331092253|ref|ZP_08341081.1| glutamate racemase [Lachnospiraceae bacterium 2_1_46FAA]
gi|330401685|gb|EGG81264.1| glutamate racemase [Lachnospiraceae bacterium 2_1_46FAA]
Length = 276
Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats.
Identities = 55/255 (21%), Positives = 95/255 (37%), Gaps = 9/255 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL V++++ +P + +Y D PYG+ + + + L
Sbjct: 8 DAPIGVFDSGVGGLTVVKEIMQNLPNENLVYFGDTARVPYGSKSVDTIIRFSKQIV-RFL 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNT L D LR P K AA T++ + I+ T AT+
Sbjct: 67 QTKKVKAIVIACNTVSALALDILRQETDIPIIGVVKPGSKVAAEVTENKRVGIIGTEATV 126
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + I Y + + + VE + ++ I+ E +
Sbjct: 127 KSGVYTKFIQQYKPDIEVLAKACPLFVPLVE----EGFVDNRIAREAIDYYLHEMKQSGI 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ----TRVFDDH 248
D ++L CTHYPL+ + + ++ + A + LL N +
Sbjct: 183 DTLILGCTHYPLLYNPIMAYMGEGIRLVNPAYETALELKQLLEEKNLENVSQEAGKVPTY 242
Query: 249 ALFLSGKPDIAMRRL 263
+ S P
Sbjct: 243 EFYSSDAPVRFKTFA 257
>gi|114707294|ref|ZP_01440191.1| glutamate racemase [Fulvimarina pelagi HTCC2506]
gi|114537175|gb|EAU40302.1| glutamate racemase [Fulvimarina pelagi HTCC2506]
Length = 262
Score = 241 bits (616), Expect = 7e-62, Method: Composition-based stats.
Identities = 131/260 (50%), Positives = 182/260 (70%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
ILI DSG+GGL VL++ R LMP+ F+YVADD GFPYGNWE+ AL+ RL+ LF D+
Sbjct: 2 NDAPILILDSGVGGLTVLREARVLMPDRRFVYVADDAGFPYGNWEEDALRDRLVALFGDL 61
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ ++P+ VIACNTA TL + LR ++P M F+G VPAIK AA T+SGL+S+L+TP T
Sbjct: 62 IVAHEPLACVIACNTASTLALNALRQSYPRMKFVGTVPAIKPAAERTRSGLVSVLATPGT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+RR YT +LI + S+ + LV S+ LAS E Y G + E + EI CFIE+ G+R
Sbjct: 122 VRRQYTQDLIDQWASRVSVKLVGSVALASLAERYMRGGFVDEQAVLAEIAPCFIEENGRR 181
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
TD++VLACTHYP +V+ R+++PWPVDWLD +++IAR+A ++ T D A+F
Sbjct: 182 TDIVVLACTHYPFLVNRMRKMAPWPVDWLDPAEAIARQADRVVGDAGTRSMHGDFDPAVF 241
Query: 252 LSGKPDIAMRRLMQGFGLKS 271
SG PD A +R+++GFGL++
Sbjct: 242 TSGAPDYATQRIVRGFGLRT 261
>gi|322377632|ref|ZP_08052122.1| glutamate racemase [Streptococcus sp. M334]
gi|321281397|gb|EFX58407.1| glutamate racemase [Streptococcus sp. M334]
Length = 264
Score = 241 bits (616), Expect = 7e-62, Method: Composition-based stats.
Identities = 53/257 (20%), Positives = 103/257 (40%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P +Y+ D PYG +++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIREYTWQLVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNTA ++ +E+++ +P A +Q G I ++ TP T+
Sbjct: 63 TK-DVKMIVIACNTATAVVWEEIKAQLDIPVLGVILPGASAAIKSSQGGKIGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I+ + ++ A VE A + + + + + +
Sbjct: 122 QSDIYRQKINDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLRPLVGK-----V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HAL 250
D ++L CTHYPL+ + + + V +D+ R LL ++ R H
Sbjct: 177 DSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINRGRDVGPLHHRF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
+ + + +
Sbjct: 237 YTTASSQSFAQIGEEWL 253
>gi|86607856|ref|YP_476618.1| glutamate racemase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556398|gb|ABD01355.1| glutamate racemase [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 287
Score = 241 bits (615), Expect = 7e-62, Method: Composition-based stats.
Identities = 59/267 (22%), Positives = 100/267 (37%), Gaps = 18/267 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GGL V + +R +P+ IY D PYG + + + + +
Sbjct: 14 PIGVFDSGLGGLTVWRALRRRLPQERLIYFGDTARLPYGERSPEEILAFVRQILTWM-QA 72
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L V+ACNT+ L D +R F +P + A A Q I +L+T AT++
Sbjct: 73 QPVKLVVMACNTSSALALDHVRQEFALPVLGLILPGAQAALA--QGSRIGVLATVATVKS 130
Query: 135 TYTSNLIHSYV--------SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
S I Y + + +E + +++ E
Sbjct: 131 RAYSRAIQEYSALDPKRFPYPVYCWEQACPEFVPLIE----AGWLDSPALRQAAERYLQP 186
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-- 244
+ D +V CTHYPL+ + + L P V +D ++ L +
Sbjct: 187 LLQQGIDTLVYGCTHYPLLDPILKPLLPSSVKRVDPGMALVGSLARELSLWGLRRPSTAA 246
Query: 245 -FDDHALFLSGKPDIAMRRLMQGFGLK 270
+ H +SG P+ + G +
Sbjct: 247 QEEPHRFCVSGDPERFAQLATPWLGFR 273
>gi|237651133|ref|ZP_04525385.1| glutamate racemase [Streptococcus pneumoniae CCRI 1974]
gi|237820927|ref|ZP_04596772.1| glutamate racemase [Streptococcus pneumoniae CCRI 1974M2]
Length = 264
Score = 241 bits (615), Expect = 8e-62, Method: Composition-based stats.
Identities = 53/257 (20%), Positives = 103/257 (40%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P +Y+ D PYG +++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIREYTWQLVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNTA ++ +++++ +P A +Q G I ++ TP T+
Sbjct: 63 TK-DVKMIVIACNTATAVVWEKIKAQLDIPVLGVILPGASAAIKSSQGGKIGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IH + ++ A VE A + + + + + +
Sbjct: 122 QSDIYRKKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLRPLVGK-----V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HAL 250
D ++L CTHYPL+ + + + V +D+ R LL ++ R H
Sbjct: 177 DSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINRGRDAGPLHHRF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
+ + + +
Sbjct: 237 YTTASSQSFAQIGEEWL 253
>gi|307705571|ref|ZP_07642423.1| glutamate racemase [Streptococcus mitis SK597]
gi|307620848|gb|EFN99932.1| glutamate racemase [Streptococcus mitis SK597]
Length = 264
Score = 241 bits (615), Expect = 8e-62, Method: Composition-based stats.
Identities = 53/257 (20%), Positives = 102/257 (39%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P +Y+ D PYG +++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIREYTWQLVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNTA ++ +E+++ +P A + G I ++ TP T+
Sbjct: 63 TK-DVKMIVIACNTATAVVWEEIKAQLDIPVLGVILPGASAAIKSSPGGKIGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IH + ++ A VE A + + + + + +
Sbjct: 122 QSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLRPLVGK-----V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HAL 250
D ++L CTHYPL+ + + + V +D+ R LL ++ R H
Sbjct: 177 DSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINRGRDAGPLHHRF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
+ + + +
Sbjct: 237 YTTASSQSFAQIGEEWL 253
>gi|197303990|ref|ZP_03169022.1| hypothetical protein RUMLAC_02727 [Ruminococcus lactaris ATCC
29176]
gi|197296958|gb|EDY31526.1| hypothetical protein RUMLAC_02727 [Ruminococcus lactaris ATCC
29176]
Length = 273
Score = 241 bits (615), Expect = 8e-62, Method: Composition-based stats.
Identities = 53/258 (20%), Positives = 104/258 (40%), Gaps = 11/258 (4%)
Query: 12 LQN---SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ + +FDSG+GGL V +++ +P+ + +Y D PYG+ + + + +
Sbjct: 2 MNKKTAPVGVFDSGVGGLTVAREISRQLPDENIVYFGDTARVPYGSKSQNTIIRFSEQII 61
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
L + VIACNTA L D ++ F +P + A T++ + ++ T
Sbjct: 62 -RFLKTKEVKAIVIACNTASALALDAVKDEFDIPILGVVIPGARAAVEATKNRKVGVVGT 120
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + +I + + + + VEE ++ E+ IE
Sbjct: 121 EATVQSGMYTKVIQGMNPEITVIEKACPLFVPLVEEGFKEHQVTEEV----IEYYLESMR 176
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
D ++L CTHYPL+ R + ++ + A +CLL + H
Sbjct: 177 STDIDAMILGCTHYPLLRSKIRAYMGDKIQIVNPAYETAMDLKCLLEENDMANDGTEGQH 236
Query: 249 ---ALFLSGKPDIAMRRL 263
+ ++S + +
Sbjct: 237 SNYSFYVSDAAEKFRKFA 254
>gi|145296506|ref|YP_001139327.1| glutamate racemase [Corynebacterium glutamicum R]
gi|140846426|dbj|BAF55425.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 284
Score = 241 bits (615), Expect = 8e-62, Method: Composition-based stats.
Identities = 56/259 (21%), Positives = 108/259 (41%), Gaps = 9/259 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + +P IY+ D PYG +++ + + + L
Sbjct: 21 DAPIGIFDSGVGGLTVARTIIDQLPHESVIYIGDTANGPYGPLPIAKVREHAIRIADE-L 79
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACNTA + R + +PA+++A A T++G + ++ T T+
Sbjct: 80 VERGCKMIVIACNTASAAFLRDARERYSVPVVEVILPAVRRAVASTRNGKVGVIGTVGTI 139
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+L + ++ V+ VE + +I + + +
Sbjct: 140 NSGAYQDLFSA-SPSIVVNAVACPRFVDFVERGITSGR----QILNIAQDYLEPLQAEGV 194
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT---RVFDDHA 249
D +VL CTHYPL+ V + V + +++ A+ +L + + ++
Sbjct: 195 DTLVLGCTHYPLLSGVIQLAMGDHVSLVSSAEETAKDVLRILSQQDLLADPDMHPEPSYS 254
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+G P+I + + G
Sbjct: 255 FESTGDPEIFAQLSRRFLG 273
>gi|11386940|sp|Q9L4V5|MURI_CARST RecName: Full=Glutamate racemase
gi|8102037|gb|AAF72713.1|AF263927_1 glutamate racemase [Carnobacterium sp. St2]
Length = 268
Score = 241 bits (615), Expect = 8e-62, Method: Composition-based stats.
Identities = 52/260 (20%), Positives = 97/260 (37%), Gaps = 8/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +I DSG+GGL V+++ +P YV D PYG + ++K + L
Sbjct: 3 KQAIGFIDSGVGGLTVVKEAMRQLPNESIYYVGDTARCPYGPRPEDQVRKFTWE-MTHFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA +++ +P + A T + I ++ T T+
Sbjct: 62 LDKNIKMLVIACNTATAAALKDIKKKLAIPVIGVILPGSRAAIKATHTNRIGVIGTEGTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ +IHS ++ + ++ VE KK + + +
Sbjct: 122 KSNQYKKMIHSKDTKALVTSLACPKFVPLVESNEY----SSAIAKKVVAETLRPLKNEGL 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT---HQTRVFDDHA 249
D ++L CTHYPL+ + + V +D+ +L N Q + +
Sbjct: 178 DTLILGCTHYPLLRPIIQNTLGDSVTLIDSGAETVSEVSTILDYFNLAVDSQNKEKAERN 237
Query: 250 LFLSGKPDIAMRRLMQGFGL 269
+ +G + + L
Sbjct: 238 FYTTGSSQMFHAIASEWLQL 257
>gi|312862544|ref|ZP_07722786.1| glutamate racemase [Streptococcus vestibularis F0396]
gi|322517484|ref|ZP_08070357.1| glutamate racemase [Streptococcus vestibularis ATCC 49124]
gi|311101949|gb|EFQ60150.1| glutamate racemase [Streptococcus vestibularis F0396]
gi|322123966|gb|EFX95525.1| glutamate racemase [Streptococcus vestibularis ATCC 49124]
Length = 271
Score = 241 bits (615), Expect = 9e-62, Method: Composition-based stats.
Identities = 57/258 (22%), Positives = 102/258 (39%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V+++++ +P +Y+ D PYG +++ L L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELKRQLPHESIVYIGDSARAPYGPRPAGQIREYTWQLV-KFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA ++ +E++ +P A +QSG I ++ TP T+
Sbjct: 62 LTKDVKMIVIACNTATAVVWEEIKEALDIPVLGVVLPGSSAAIKSSQSGQIGVIGTPMTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I Q ++ +S A VE + + + + + +
Sbjct: 122 ASNIYEQKIKRLAPQMNVLSLSCPRFAPIVESNEINSSVAKKIVYESMAPLVDK-----V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--AL 250
D +VL CTHYPL+ + + + V +D+ R LL +++R +D
Sbjct: 177 DTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAETVRDVSVLLNYFEINRSREVEDKTEEY 236
Query: 251 FLSGKPDIAMRRLMQGFG 268
+ + Q G
Sbjct: 237 YTTASVLGFKEIAEQWLG 254
>gi|15608478|ref|NP_215854.1| glutamate racemase [Mycobacterium tuberculosis H37Rv]
gi|15840793|ref|NP_335830.1| glutamate racemase [Mycobacterium tuberculosis CDC1551]
gi|31792534|ref|NP_855027.1| glutamate racemase [Mycobacterium bovis AF2122/97]
gi|148661127|ref|YP_001282650.1| glutamate racemase [Mycobacterium tuberculosis H37Ra]
gi|148822559|ref|YP_001287313.1| glutamate racemase [Mycobacterium tuberculosis F11]
gi|167969085|ref|ZP_02551362.1| glutamate racemase [Mycobacterium tuberculosis H37Ra]
gi|215403185|ref|ZP_03415366.1| glutamate racemase [Mycobacterium tuberculosis 02_1987]
gi|215410983|ref|ZP_03419791.1| glutamate racemase [Mycobacterium tuberculosis 94_M4241A]
gi|215426667|ref|ZP_03424586.1| glutamate racemase [Mycobacterium tuberculosis T92]
gi|215430224|ref|ZP_03428143.1| glutamate racemase [Mycobacterium tuberculosis EAS054]
gi|215445520|ref|ZP_03432272.1| glutamate racemase [Mycobacterium tuberculosis T85]
gi|218753049|ref|ZP_03531845.1| glutamate racemase [Mycobacterium tuberculosis GM 1503]
gi|219557241|ref|ZP_03536317.1| glutamate racemase [Mycobacterium tuberculosis T17]
gi|253799614|ref|YP_003032615.1| glutamate racemase MurI [Mycobacterium tuberculosis KZN 1435]
gi|254364235|ref|ZP_04980281.1| glutamate racemase murI [Mycobacterium tuberculosis str. Haarlem]
gi|254550350|ref|ZP_05140797.1| glutamate racemase [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260186277|ref|ZP_05763751.1| glutamate racemase [Mycobacterium tuberculosis CPHL_A]
gi|260200395|ref|ZP_05767886.1| glutamate racemase [Mycobacterium tuberculosis T46]
gi|260204599|ref|ZP_05772090.1| glutamate racemase [Mycobacterium tuberculosis K85]
gi|289442780|ref|ZP_06432524.1| glutamate racemase [Mycobacterium tuberculosis T46]
gi|289446933|ref|ZP_06436677.1| glutamate racemase MurI [Mycobacterium tuberculosis CPHL_A]
gi|289554870|ref|ZP_06444080.1| glutamate racemase MurI [Mycobacterium tuberculosis KZN 605]
gi|289569351|ref|ZP_06449578.1| glutamate racemase MurI [Mycobacterium tuberculosis T17]
gi|289574004|ref|ZP_06454231.1| glutamate racemase MurI [Mycobacterium tuberculosis K85]
gi|289745090|ref|ZP_06504468.1| glutamate racemase MurI [Mycobacterium tuberculosis 02_1987]
gi|289749894|ref|ZP_06509272.1| glutamate racemase MurI [Mycobacterium tuberculosis T92]
gi|289753420|ref|ZP_06512798.1| glutamate racemase MurI [Mycobacterium tuberculosis EAS054]
gi|289757443|ref|ZP_06516821.1| glutamate racemase [Mycobacterium tuberculosis T85]
gi|289761499|ref|ZP_06520877.1| glutamate racemase MurI [Mycobacterium tuberculosis GM 1503]
gi|294994896|ref|ZP_06800587.1| glutamate racemase [Mycobacterium tuberculosis 210]
gi|297633891|ref|ZP_06951671.1| glutamate racemase [Mycobacterium tuberculosis KZN 4207]
gi|297730879|ref|ZP_06959997.1| glutamate racemase [Mycobacterium tuberculosis KZN R506]
gi|298524845|ref|ZP_07012254.1| glutamate racemase [Mycobacterium tuberculosis 94_M4241A]
gi|306775517|ref|ZP_07413854.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu001]
gi|306780667|ref|ZP_07419004.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu002]
gi|306784068|ref|ZP_07422390.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu003]
gi|306788429|ref|ZP_07426751.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu004]
gi|306792758|ref|ZP_07431060.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu005]
gi|306797162|ref|ZP_07435464.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu006]
gi|306803041|ref|ZP_07439709.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu008]
gi|306807235|ref|ZP_07443903.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu007]
gi|306967432|ref|ZP_07480093.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu009]
gi|306971625|ref|ZP_07484286.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu010]
gi|307079337|ref|ZP_07488507.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu011]
gi|307083902|ref|ZP_07493015.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu012]
gi|313658212|ref|ZP_07815092.1| glutamate racemase [Mycobacterium tuberculosis KZN V2475]
gi|54037866|sp|P63636|MURI_MYCBO RecName: Full=Glutamate racemase
gi|54041259|sp|P63635|MURI_MYCTU RecName: Full=Glutamate racemase
gi|166231043|sp|A5U238|MURI_MYCTA RecName: Full=Glutamate racemase
gi|1340104|emb|CAA98102.1| PROBABLE GLUTAMATE RACEMASE MURI [Mycobacterium tuberculosis H37Rv]
gi|13880988|gb|AAK45644.1| glutamate racemase [Mycobacterium tuberculosis CDC1551]
gi|31618123|emb|CAD94234.1| PROBABLE GLUTAMATE RACEMASE MURI [Mycobacterium bovis AF2122/97]
gi|134149749|gb|EBA41794.1| glutamate racemase murI [Mycobacterium tuberculosis str. Haarlem]
gi|148505279|gb|ABQ73088.1| glutamate racemase [Mycobacterium tuberculosis H37Ra]
gi|148721086|gb|ABR05711.1| glutamate racemase murI [Mycobacterium tuberculosis F11]
gi|253321117|gb|ACT25720.1| glutamate racemase MurI [Mycobacterium tuberculosis KZN 1435]
gi|289415699|gb|EFD12939.1| glutamate racemase [Mycobacterium tuberculosis T46]
gi|289419891|gb|EFD17092.1| glutamate racemase MurI [Mycobacterium tuberculosis CPHL_A]
gi|289439502|gb|EFD21995.1| glutamate racemase MurI [Mycobacterium tuberculosis KZN 605]
gi|289538435|gb|EFD43013.1| glutamate racemase MurI [Mycobacterium tuberculosis K85]
gi|289543105|gb|EFD46753.1| glutamate racemase MurI [Mycobacterium tuberculosis T17]
gi|289685618|gb|EFD53106.1| glutamate racemase MurI [Mycobacterium tuberculosis 02_1987]
gi|289690481|gb|EFD57910.1| glutamate racemase MurI [Mycobacterium tuberculosis T92]
gi|289694007|gb|EFD61436.1| glutamate racemase MurI [Mycobacterium tuberculosis EAS054]
gi|289709005|gb|EFD73021.1| glutamate racemase MurI [Mycobacterium tuberculosis GM 1503]
gi|289713007|gb|EFD77019.1| glutamate racemase [Mycobacterium tuberculosis T85]
gi|298494639|gb|EFI29933.1| glutamate racemase [Mycobacterium tuberculosis 94_M4241A]
gi|308215989|gb|EFO75388.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu001]
gi|308326496|gb|EFP15347.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu002]
gi|308331137|gb|EFP19988.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu003]
gi|308334978|gb|EFP23829.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu004]
gi|308338784|gb|EFP27635.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu005]
gi|308342425|gb|EFP31276.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu006]
gi|308346336|gb|EFP35187.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu007]
gi|308350259|gb|EFP39110.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu008]
gi|308354908|gb|EFP43759.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu009]
gi|308358852|gb|EFP47703.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu010]
gi|308362789|gb|EFP51640.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu011]
gi|308366436|gb|EFP55287.1| glutamate racemase MurI [Mycobacterium tuberculosis SUMu012]
gi|323720155|gb|EGB29258.1| glutamate racemase murI [Mycobacterium tuberculosis CDC1551A]
gi|326902961|gb|EGE49894.1| glutamate racemase murI [Mycobacterium tuberculosis W-148]
gi|328459360|gb|AEB04783.1| glutamate racemase MurI [Mycobacterium tuberculosis KZN 4207]
Length = 271
Score = 241 bits (615), Expect = 9e-62, Method: Composition-based stats.
Identities = 55/256 (21%), Positives = 104/256 (40%), Gaps = 8/256 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ +FDSG+GGL V + + +P+ +YV D PYG ++ + + D L
Sbjct: 7 PVGVFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPEIRAHALAIGDD-LVG 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
VIACN+A + + R + +PA+++A A T++G I ++ T AT+
Sbjct: 66 RGVKALVIACNSASSACLRDARERYQVPVVEVILPAVRRAVAATRNGRIGVIGTRATITS 125
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + I V+ VE + ++ +G + D
Sbjct: 126 HAYQDAFAA-ARDTEITAVACPRFVDFVERGVTSGR----QVLGLAQGYLEPLQRAEVDT 180
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHALFL 252
+VL CTHYPL+ + + V + +++ A+ +L I+ +
Sbjct: 181 LVLGCTHYPLLSGLIQLAMGENVTLVSSAEETAKEVVRVLTEIDLLRPHDAPPATRIFEA 240
Query: 253 SGKPDIAMRRLMQGFG 268
+G P+ + + G
Sbjct: 241 TGDPEAFTKLAARFLG 256
>gi|239782122|pdb|3HFR|A Chain A, Crystal Structure Of Glutamate Racemase From Listeria
Monocytogenes
gi|239782123|pdb|3HFR|B Chain B, Crystal Structure Of Glutamate Racemase From Listeria
Monocytogenes
gi|259090342|pdb|3IST|A Chain A, Crystal Structure Of Glutamate Racemase From Listeria
Monocytogenes In Complex With Succinic Acid
gi|259090343|pdb|3IST|B Chain B, Crystal Structure Of Glutamate Racemase From Listeria
Monocytogenes In Complex With Succinic Acid
gi|259090345|pdb|3ISV|A Chain A, Crystal Structure Of Glutamate Racemase From Listeria
Monocytogenes In Complex With Acetate Ion
gi|259090346|pdb|3ISV|B Chain B, Crystal Structure Of Glutamate Racemase From Listeria
Monocytogenes In Complex With Acetate Ion
Length = 269
Score = 241 bits (615), Expect = 9e-62, Method: Composition-based stats.
Identities = 54/256 (21%), Positives = 93/256 (36%), Gaps = 6/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +I DSG+GGL V++++ +P Y+ D PYG + + K ++ L
Sbjct: 5 KQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEX-TNFL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
VIACNTA ++R P + A T++ I +L T T+
Sbjct: 64 VDRGIKXLVIACNTATAAALYDIREKLDIPVIGVIQPGSRAALKATRNNKIGVLGTLGTV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + ++ S VE KK + + + +
Sbjct: 124 ESXAYPTALKGLNRRVEVDSLACPKFVSVVESGEYK----SAIAKKVVAESLLPLKSTKI 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHALF 251
D ++L CTHYPL+ + V +++ + A LL N T +H F
Sbjct: 180 DTVILGCTHYPLLKPIIENFXGDGVAVINSGEETASEVSALLDYHNLLDATDEEIEHRFF 239
Query: 252 LSGKPDIAMRRLMQGF 267
+G I
Sbjct: 240 TTGSTQIFKDIAKDWL 255
>gi|125974438|ref|YP_001038348.1| glutamate racemase [Clostridium thermocellum ATCC 27405]
gi|256005209|ref|ZP_05430177.1| glutamate racemase [Clostridium thermocellum DSM 2360]
gi|281418963|ref|ZP_06249981.1| glutamate racemase [Clostridium thermocellum JW20]
gi|125714663|gb|ABN53155.1| glutamate racemase [Clostridium thermocellum ATCC 27405]
gi|255990863|gb|EEU00977.1| glutamate racemase [Clostridium thermocellum DSM 2360]
gi|281407420|gb|EFB37680.1| glutamate racemase [Clostridium thermocellum JW20]
gi|316941574|gb|ADU75608.1| glutamate racemase [Clostridium thermocellum DSM 1313]
Length = 268
Score = 241 bits (615), Expect = 9e-62, Method: Composition-based stats.
Identities = 54/249 (21%), Positives = 101/249 (40%), Gaps = 6/249 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL VL++++ L+P +Y D PYG+ + K L
Sbjct: 3 NRPIGVFDSGLGGLTVLKEIKNLLPRESIVYFGDSGRAPYGSKSKETVVKYTFQDI-RFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA D+++++F P A T + + ++ T AT+
Sbjct: 62 LNQDIKMIVIACNTASACSLDQVKNSFDIPIVEVVGPGAATAVRETVNKKVGVIGTVATV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + I+ + + VE + D + E + + K
Sbjct: 122 SSGVYEKAILKLDPEIEIYQKACPLFVPLVE----EGWWENDIALRIAEEYLLPLKEKNI 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHALF 251
D +VL CTHYPL+ + ++ V + ++ +A+ + ++ + N ++ + +
Sbjct: 178 DTLVLGCTHYPLLYNTISKVMGDGVKLVSSALEVAKVVKEMIEKSNLNRDEKLNPVYRYY 237
Query: 252 LSGKPDIAM 260
S
Sbjct: 238 TSDSVYKFE 246
>gi|19553709|ref|NP_601711.1| glutamate racemase [Corynebacterium glutamicum ATCC 13032]
gi|62391349|ref|YP_226751.1| glutamate racemase [Corynebacterium glutamicum ATCC 13032]
gi|21325280|dbj|BAB99902.1| Glutamate racemase [Corynebacterium glutamicum ATCC 13032]
gi|41326690|emb|CAF21172.1| GLUTAMATE RACEMASE [Corynebacterium glutamicum ATCC 13032]
Length = 284
Score = 241 bits (615), Expect = 9e-62, Method: Composition-based stats.
Identities = 56/259 (21%), Positives = 108/259 (41%), Gaps = 9/259 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + +P IY+ D PYG +++ + + + L
Sbjct: 21 DAPIGIFDSGVGGLTVARTIIDQLPHESVIYIGDTANGPYGPLPIAKVREHAIRIADE-L 79
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACNTA + R + +PA+++A A T++G + ++ T T+
Sbjct: 80 VERGCKMIVIACNTASAAFLRDARERYSVPVVEVILPAVRRAVASTRNGKVGVIGTVGTI 139
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+L + ++ V+ VE + +I + + +
Sbjct: 140 NSGAYQDLFSA-SPSIVVNAVACPRFVDFVERGITSGR----QILNIAQDYLEPLQAEGV 194
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT---RVFDDHA 249
D +VL CTHYPL+ V + V + +++ A+ +L + + ++
Sbjct: 195 DTLVLGCTHYPLLSGVIQLAMGDHVSLVSSAEETAKDVLRILSQQDLLADPDMHPEPSYS 254
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+G P+I + + G
Sbjct: 255 FESTGDPEIFAQLSRRFLG 273
>gi|325663116|ref|ZP_08151566.1| glutamate racemase [Lachnospiraceae bacterium 4_1_37FAA]
gi|325470570|gb|EGC73800.1| glutamate racemase [Lachnospiraceae bacterium 4_1_37FAA]
Length = 286
Score = 241 bits (615), Expect = 9e-62, Method: Composition-based stats.
Identities = 59/262 (22%), Positives = 103/262 (39%), Gaps = 11/262 (4%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
E K I +FDSG+GGL V +++ +P +Y D PYG+ + + + +
Sbjct: 11 IENKKDMPIGVFDSGVGGLTVAREIMRQLPNESIVYFGDTARVPYGSKSETTIIRYSRQI 70
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
L + VIACNTA L D +R F P + A T + I ++
Sbjct: 71 I-RFLLTKEVKAIVIACNTASALALDAVRKEFKIPIIGVVAPGARAAREETINKKIGVIG 129
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT++ LI + Q + + + VEE KI ++ I+ +
Sbjct: 130 TEATVKSEIYKKLIQAEDPQISVSGRACPLFVPLVEEGFAKHKIT----REVIDIYLSDM 185
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT----- 242
D ++L CTHYPL+ R+ + ++ + A + LL +
Sbjct: 186 RESDIDTLILGCTHYPLLRSTIREYMGEKIHLVNPAYETAMDLKRLLEEEEMLRDAPVNG 245
Query: 243 -RVFDDHALFLSGKPDIAMRRL 263
+++ ++S D +
Sbjct: 246 QEEHGEYSFYVSDAADKFKQFA 267
>gi|151567723|pdb|2JFQ|A Chain A, Crystal Structure Of Staphylococcus Aureus Glutamate
Racemase In Complex With D-Glutamate
gi|151567724|pdb|2JFQ|B Chain B, Crystal Structure Of Staphylococcus Aureus Glutamate
Racemase In Complex With D-Glutamate
Length = 286
Score = 241 bits (615), Expect = 9e-62, Method: Composition-based stats.
Identities = 57/265 (21%), Positives = 96/265 (36%), Gaps = 5/265 (1%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + I + DSG+GGL V +++ +P Y+ D PYG +K+ +
Sbjct: 16 PRGSHMNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVE 75
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
+ L ++ + VIACNTA + + L+ T P + A T++ + +L
Sbjct: 76 IARK-LMEFDIKMLVIACNTATAVALEYLQKTLSISVIGVIEPGARTAIMTTRNQNVLVL 134
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T++ I +H V+ VE+ + I
Sbjct: 135 GTEGTIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYSDPTITSIV---IHQTLKR 191
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVF 245
+D ++L CTHYPL+ + + AR LL N H +
Sbjct: 192 WRNSESDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTEH 251
Query: 246 DDHALFLSGKPDIAMRRLMQGFGLK 270
DH F +G + + L
Sbjct: 252 PDHRFFATGDTTHITNIIKEWLNLS 276
>gi|314933347|ref|ZP_07840712.1| glutamate racemase [Staphylococcus caprae C87]
gi|313653497|gb|EFS17254.1| glutamate racemase [Staphylococcus caprae C87]
Length = 266
Score = 241 bits (615), Expect = 9e-62, Method: Composition-based stats.
Identities = 52/257 (20%), Positives = 93/257 (36%), Gaps = 5/257 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +++ +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGDEVRQFTTEIAQK- 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L ++ + VIACNTA + + L+ P P + A T++ + +L T T
Sbjct: 60 LMEFDIKMLVIACNTATAVALEHLQRLLPIPVIGVIEPGARTAIMTTKNQNVLVLGTEGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ I +++ V+ VE+ + I +
Sbjct: 120 IKSEAYRTHIKKINPNVNVYGVACPGFVPLVEQMRYNDPTITSIV---IHQTLKQWRNSD 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D ++L CTHYPL+ + + AR LL N H + H
Sbjct: 177 ADTVILGCTHYPLLYKPIYDYFDGEKTVISSGLETAREVSALLTFSNEHASYTEHPKHRF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
F +G + +
Sbjct: 237 FATGDTTHIKNIIAEWL 253
>gi|291571969|dbj|BAI94241.1| glutamate racemase [Arthrospira platensis NIES-39]
Length = 285
Score = 241 bits (615), Expect = 9e-62, Method: Composition-based stats.
Identities = 55/256 (21%), Positives = 97/256 (37%), Gaps = 7/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL VL+++ +P +Y AD PYG + + + + + +
Sbjct: 8 QKIAIFDSGVGGLTVLRELYRQLPNESILYFADTARLPYGTRSPEEIVQFVREIITWAV- 66
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ ++ACNT+ L + +RS F +P + A +Q I +++TPAT
Sbjct: 67 AQDVKMVLMACNTSSALALEVVRSEFDIPILGLILPGARAAI--SQGERIGVIATPATAA 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I + V +E+ + ++ +R D
Sbjct: 125 SNAYRQAIQEINPAVQVWQVGCPAFVPLIEQNRIHDPCTLEAARE----YLTPLIQQRID 180
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++ CTHYP + V R L P V +D + + L + + +S
Sbjct: 181 TLIYGCTHYPHLAPVLRSLLPAAVKLVDPAVHLVEAVAQELELLGLRHGDLPRPTRFCVS 240
Query: 254 GKPDIAMRRLMQGFGL 269
G + +Q G
Sbjct: 241 GCAEQFANLSVQWLGY 256
>gi|329116659|ref|ZP_08245376.1| glutamate racemase [Streptococcus parauberis NCFD 2020]
gi|326907064|gb|EGE53978.1| glutamate racemase [Streptococcus parauberis NCFD 2020]
Length = 264
Score = 241 bits (615), Expect = 9e-62, Method: Composition-based stats.
Identities = 55/257 (21%), Positives = 96/257 (37%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++R +P + +Y+ D PYG +++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELRRQLPHENIVYIGDSARAPYGPRPAEQIREFTWDLVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + V ACNTA + +E++ +P A T + + ++ TP T+
Sbjct: 63 TK-DVKMIVFACNTATAVAWEEVKEALSIPVLGVILPGSSAAIKSTTNRKVGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + ++ VE IK KK + GK
Sbjct: 122 SSNIYQEKIQLLAPMLSVISLACPKFVPIVESNE----IKSSVAKKVVYDTLSPLVGK-V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV--FDDHAL 250
D +VL CTHYPL+ + + + V +D+ R LL + +H
Sbjct: 177 DTLVLGCTHYPLLRPIIQNVMGPGVKLIDSGAECVRDISVLLNYFQINANPKEIEKNHRF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
+ + +
Sbjct: 237 YTTAGVESFQEIATDWL 253
>gi|313890894|ref|ZP_07824518.1| glutamate racemase [Streptococcus pseudoporcinus SPIN 20026]
gi|313120792|gb|EFR43907.1| glutamate racemase [Streptococcus pseudoporcinus SPIN 20026]
Length = 264
Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats.
Identities = 51/257 (19%), Positives = 95/257 (36%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P + +YV D PYG +++ L + L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPYENIVYVGDSARAPYGPRPAEQIREYTWELVN-FL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V ACNTA + +E++ +P A T G + ++ TP T+
Sbjct: 62 VTKNVKMIVFACNTATAVAWEEVKEALDIPVLGVILPGSSAAIKSTTKGHVGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + ++ VE + + + + + +
Sbjct: 122 TSDIYRQKIQLLAPAVEVISLACPKFVPIVESNEIQSSVAKKVVYETLAPLVGK-----V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA--L 250
D +VL CTHYPL+ + + + V +D+ R LL + +R +
Sbjct: 177 DTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFEINSSRYQEKVRHYF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
+ + P+I
Sbjct: 237 YTTASPEIFQEIASVWL 253
>gi|297246515|ref|ZP_06930353.1| glutamate racemase [Staphylococcus aureus A8796]
gi|297176621|gb|EFH35884.1| glutamate racemase [Staphylococcus aureus A8796]
Length = 266
Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 96/260 (36%), Gaps = 5/260 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQFTVEIARK- 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L ++ + VIACNTA + + L+ T P + A T++ + +L T T
Sbjct: 60 LMEFDIKMLVIACNTATAVALEYLQKTLSIPVIGVIEPGARTAIMTTRNQNVLVLGTEGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ I +H V+ VE+ + I
Sbjct: 120 IKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYSDPTITSIV---IHQTLKRWRNSE 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
+D ++L CTHYPL+ + + AR LL N H + DH
Sbjct: 177 SDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTEHPDHRF 236
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
F +G P + + L
Sbjct: 237 FATGDPTHITNIIKEWLNLS 256
>gi|110633622|ref|YP_673830.1| glutamate racemase [Mesorhizobium sp. BNC1]
gi|110284606|gb|ABG62665.1| glutamate racemase [Chelativorans sp. BNC1]
Length = 274
Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats.
Identities = 129/257 (50%), Positives = 182/257 (70%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ IL FDSGIGGL V+++ R L+PE+ ++YVADD FPYG WE+ AL+ RL+ LF ++
Sbjct: 8 SPILFFDSGIGGLSVVKEARVLLPEHPYVYVADDAAFPYGAWEEGALRARLVELFGSLIA 67
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++ P L VIACNTA TL +LR+ +PS F+G VPAIK AA T+SGL+S+L+TP T++
Sbjct: 68 RFAPSLIVIACNTASTLAIADLRAAYPSQLFVGTVPAIKPAAERTRSGLVSVLATPGTVK 127
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI +Y ++CH+ LV S LAS E+Y + E+ ++KEIE CF+E++G+RTD
Sbjct: 128 RQYTRDLISAYAAKCHVRLVGSENLASLAEKYMREGFVDEEAVRKEIEPCFMERDGQRTD 187
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++VLACTHYP +V+ R+++PWPVDW+D S++IARRA L + D A F S
Sbjct: 188 IVVLACTHYPFLVNRMRKMAPWPVDWIDTSEAIARRALTLAETLPPPARPDLPDRACFTS 247
Query: 254 GKPDIAMRRLMQGFGLK 270
G P ++RRL GFG +
Sbjct: 248 GNPPASLRRLASGFGFR 264
>gi|148989674|ref|ZP_01821006.1| glutamate racemase [Streptococcus pneumoniae SP6-BS73]
gi|147924991|gb|EDK76073.1| glutamate racemase [Streptococcus pneumoniae SP6-BS73]
Length = 264
Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats.
Identities = 54/257 (21%), Positives = 103/257 (40%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P +Y+ D PYG +++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIREYTWQLVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNTA ++ +E+++ +P A +Q G I ++ TP T+
Sbjct: 63 TK-DVKMIVIACNTATAVVWEEIKAQLDIPVLGVILPGASAAIKSSQGGKIGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IH + ++ A VE A + + + + + +
Sbjct: 122 QSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLRPLVGK-----V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HAL 250
D ++L CTHYPL+ + + + V +D+ R LL ++ R H
Sbjct: 177 DSLILGCTHYPLLRPIIQNVMGAKVQLIDSGAECVRDISVLLNYFEINRGRDAGPLHHRF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
+ + + +
Sbjct: 237 YTTASSQSFAQIGEEWL 253
>gi|21903447|sp|Q9XDZ7|MURI_CORGL RecName: Full=Glutamate racemase
Length = 273
Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats.
Identities = 56/259 (21%), Positives = 108/259 (41%), Gaps = 9/259 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + +P IY+ D PYG +++ + + + L
Sbjct: 10 DAPIGIFDSGVGGLTVARTIIDQLPHESVIYIGDTANGPYGPLPIAKVREHAIRIADE-L 68
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACNTA + R + +PA+++A A T++G + ++ T T+
Sbjct: 69 VERGCKMIVIACNTASAAFLRDARERYSVPVVEVILPAVRRAVASTRNGKVGVIGTVGTI 128
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+L + ++ V+ VE + +I + + +
Sbjct: 129 NSGAYQDLFSA-SPSIVVNAVACPRFVDFVERGITSGR----QILNIAQDYLEPLQAEGV 183
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT---RVFDDHA 249
D +VL CTHYPL+ V + V + +++ A+ +L + + ++
Sbjct: 184 DTLVLGCTHYPLLSGVIQLAMGDHVSLVSSAEETAKDVLRILSQQDLLADPDMHPEPSYS 243
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+G P+I + + G
Sbjct: 244 FESTGDPEIFAQLSRRFLG 262
>gi|242373382|ref|ZP_04818956.1| glutamate racemase [Staphylococcus epidermidis M23864:W1]
gi|242348745|gb|EES40347.1| glutamate racemase [Staphylococcus epidermidis M23864:W1]
Length = 266
Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats.
Identities = 53/257 (20%), Positives = 93/257 (36%), Gaps = 5/257 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEEVKQFTTEIAQK- 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L ++ + VIACNTA + + L+ P P + A T++ + +L T T
Sbjct: 60 LMEFNIKMLVIACNTATAVALEHLQKLLPIPVIGVIEPGARTAIMTTKNQNVLVLGTEGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ I +++ V+ VE+ + I +
Sbjct: 120 IKSEAYRTHIKKINPNVNVYGVACPGFVPLVEQMRYNDPTITSIV---IHQTLKQWRNSD 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D ++L CTHYPL+ + + AR LL N H + H
Sbjct: 177 ADTVILGCTHYPLLYKPIYDYFDGTKTVISSGLETAREVSALLTFSNEHASYTEHPKHRF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
F +G + +
Sbjct: 237 FATGDTTHIENIIAEWL 253
>gi|325294218|ref|YP_004280732.1| Glutamate racemase [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325064666|gb|ADY72673.1| Glutamate racemase [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 263
Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats.
Identities = 64/257 (24%), Positives = 114/257 (44%), Gaps = 10/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I IFDSG+GGL VL+ +R +P IY D PYG + + + + +L
Sbjct: 3 ERPIGIFDSGVGGLTVLRALRKKLPSEDLIYFGDTARVPYGTKSPKTIIRYSIEN-TKLL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
++ + ++ACNT+ + + L+S F + LG + P + A + T+SG + ++ T AT
Sbjct: 62 KRFNVKMVIVACNTSSSYALEILKSEFSDVPILGVINPGARLAVSATKSGKVGVIGTEAT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ IH C + + +EE + + ++ + GK
Sbjct: 122 IKSGAYRKAIHFINPSCLVFEKVCPLFVPLIEEGWLNDPVTLEVARR----YVLPLLGKG 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTHYPLI + ++ V +D++ +IA LP + + +
Sbjct: 178 IDTLVLGCTHYPLIKDILLKIC-KNVTLIDSAQAIADEVAKALPSK---KESGKGNVKIL 233
Query: 252 LSGKPDIAMRRLMQGFG 268
+S K D + G
Sbjct: 234 VSDKTDRFEKIAKMIMG 250
>gi|121637269|ref|YP_977492.1| glutamate racemase [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224989743|ref|YP_002644430.1| glutamate racemase [Mycobacterium bovis BCG str. Tokyo 172]
gi|166231041|sp|A1KIC8|MURI_MYCBP RecName: Full=Glutamate racemase
gi|254766119|sp|C1AMY3|MURI_MYCBT RecName: Full=Glutamate racemase
gi|121492916|emb|CAL71387.1| Probable glutamate racemase murI [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224772856|dbj|BAH25662.1| glutamate racemase [Mycobacterium bovis BCG str. Tokyo 172]
Length = 271
Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats.
Identities = 55/256 (21%), Positives = 104/256 (40%), Gaps = 8/256 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ +FDSG+GGL V + + +P+ +YV D PYG ++ + + D L
Sbjct: 7 PVGVFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPEIRAHALAIGDD-LVG 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
VIACN+A + + R + +PA+++A A T++G I ++ T AT+
Sbjct: 66 RGVKALVIACNSASSACLRDARERYQVPVVEVILPAVRRAVAATRNGRIGVIGTRATITS 125
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + I V+ VE + ++ +G + D
Sbjct: 126 HAYQDAFAA-ARDTEITAVACPRFVDFVELGVTSGR----QVLGLAQGYLEPLQRAEVDT 180
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHALFL 252
+VL CTHYPL+ + + V + +++ A+ +L I+ +
Sbjct: 181 LVLGCTHYPLLSGLIQLAMGENVTLVSSAEETAKEVVRVLTEIDLLRPHDAPPATRIFEA 240
Query: 253 SGKPDIAMRRLMQGFG 268
+G P+ + + G
Sbjct: 241 TGDPEAFTKLAARFLG 256
>gi|118619134|ref|YP_907466.1| glutamate racemase [Mycobacterium ulcerans Agy99]
gi|183984029|ref|YP_001852320.1| glutamate racemase MurI [Mycobacterium marinum M]
gi|166231044|sp|A0PUH6|MURI_MYCUA RecName: Full=Glutamate racemase
gi|229486244|sp|B2HQH3|MURI_MYCMM RecName: Full=Glutamate racemase
gi|118571244|gb|ABL05995.1| glutamate racemase MurI [Mycobacterium ulcerans Agy99]
gi|183177355|gb|ACC42465.1| glutamate racemase MurI [Mycobacterium marinum M]
Length = 271
Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats.
Identities = 58/256 (22%), Positives = 103/256 (40%), Gaps = 8/256 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ IFDSG+GGL V + + +P+ +YV D PYG ++ + + D L
Sbjct: 7 PVGIFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPEVRAHALAIGDD-LVG 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
VIACNTA + R + +PA+++A A T++G I ++ T AT+
Sbjct: 66 RGVKALVIACNTASAACLRDARERYDVPVVEVILPAVRRAVATTRNGRIGVIGTRATITS 125
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + I V+ VE + ++ EG + D
Sbjct: 126 HAYQDAFAA-ARDTEITAVACPRFVDFVERGVTSGR----QVLGLAEGYLEPLQRSGVDT 180
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA--LFL 252
+VL CTHYPL+ + + + V + +++ A+ +L + +
Sbjct: 181 LVLGCTHYPLLSGLIQLVMGDNVTLVSSAEETAKEVLRVLTERDILRPHDAPPATRLFEA 240
Query: 253 SGKPDIAMRRLMQGFG 268
+G P+ M + G
Sbjct: 241 TGDPEAFMALAARFLG 256
>gi|225021576|ref|ZP_03710768.1| hypothetical protein CORMATOL_01597 [Corynebacterium matruchotii
ATCC 33806]
gi|224945567|gb|EEG26776.1| hypothetical protein CORMATOL_01597 [Corynebacterium matruchotii
ATCC 33806]
Length = 288
Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats.
Identities = 61/269 (22%), Positives = 104/269 (38%), Gaps = 14/269 (5%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
MKI N + I IFDSG+GGL V + + +P Y+ D PYG +
Sbjct: 21 MKITN-------NSPIGIFDSGVGGLTVARTIMEQLPGESITYIGDTAHSPYGPLPIAEV 73
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+K + + + L + + VIACNTA + R + PA+++A A T++
Sbjct: 74 RKHALRIADE-LVERGSKMLVIACNTASAACLRDARERYDVPVIEVIHPAVRRAVATTRN 132
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G I ++ T T+ +L I + VE + +I
Sbjct: 133 GRIGVIGTSGTINSGAYQDLFSV-NPNVEITAQACPRFVDFVERGITSGR----QILGVA 187
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ + D +VL CTHYPL+ V + V + +++ A+ L +
Sbjct: 188 QAYIEPLQTAGVDTLVLGCTHYPLLSGVIQLAIGDNVTLVSSAEETAKDVLKQLSTTDML 247
Query: 241 QT-RVFDDHALFLSGKPDIAMRRLMQGFG 268
H +G P++ + + G
Sbjct: 248 ADESTTPIHHFESTGDPELFSQLAKRFLG 276
>gi|209524014|ref|ZP_03272566.1| glutamate racemase [Arthrospira maxima CS-328]
gi|209495686|gb|EDZ95989.1| glutamate racemase [Arthrospira maxima CS-328]
Length = 284
Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats.
Identities = 55/256 (21%), Positives = 98/256 (38%), Gaps = 7/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL VL+++ +P +Y AD PYG + + + + + +
Sbjct: 8 QKIAIFDSGVGGLTVLRELYRQLPNESILYFADTARLPYGTRSPEEIVQFVREIITWAV- 66
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ ++ACNT+ L + +RS F +P + A +Q I +++TPAT
Sbjct: 67 AQDVKMVLMACNTSSALALEVVRSEFDIPILGLILPGSRAAI--SQGERIGVIATPATAA 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I + V +E+ + ++ +R D
Sbjct: 125 SNAYRQAIQEINPAVQVWQVGCPAFVPLIEQNRIHDPCTLEVARE----YLAPLIQQRID 180
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++ CTHYP + V R L P V +D + + L + + + +S
Sbjct: 181 TLIYGCTHYPHLAPVLRSLLPASVKLVDPAVHLVEAVVQELELLGLRHSDLPRPTRFCVS 240
Query: 254 GKPDIAMRRLMQGFGL 269
G + +Q G
Sbjct: 241 GCAEQFANLSVQWLGY 256
>gi|258451847|ref|ZP_05699868.1| glutamate racemase [Staphylococcus aureus A5948]
gi|257860455|gb|EEV83282.1| glutamate racemase [Staphylococcus aureus A5948]
Length = 266
Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 96/260 (36%), Gaps = 5/260 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARK- 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L ++ + VIACNTA + + L+ T P + A T++ + +L T T
Sbjct: 60 LMEFDIKMLVIACNTATAVALEYLQKTLSIPVIGVIEPGARTAIMTTRNQNVLVLGTEGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ I +H V+ VE+ + I
Sbjct: 120 IKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYSDPTITSIV---IHQTLKRWCNSE 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
+D ++L CTHYPL+ + + AR LL N H + DH
Sbjct: 177 SDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTEHPDHRF 236
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
F +G P + + L
Sbjct: 237 FATGDPTHITNIIKEWLNLS 256
>gi|169628573|ref|YP_001702222.1| glutamate racemase [Mycobacterium abscessus ATCC 19977]
gi|169240540|emb|CAM61568.1| Probable glutamate racemase MurI [Mycobacterium abscessus]
Length = 282
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 57/263 (21%), Positives = 103/263 (39%), Gaps = 13/263 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + +P+ +YV D PYG ++ + + D L
Sbjct: 3 DAPIGIFDSGVGGLTVARAIIDQLPDEDILYVGDTGNGPYGPLTIPEIRTHALTIGDD-L 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
VIACNTA + R + + + V PA+++A T + I ++ T AT
Sbjct: 62 VGRGVKALVIACNTASAACLRDARERYAPVPVIEVVLPAVRRAVHTTHNNKIGVIGTEAT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + I V+ VE + ++ + EG + +
Sbjct: 122 IASGAYQDAFAA-ARDTEITAVACPRFVDFVERGITSGR----QVLQLAEGYLEPLQRAQ 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF------ 245
D +VL CTHYPL+ + + V + +++ A+ +L + +
Sbjct: 177 VDTVVLGCTHYPLLSGLIQLAMGEDVTLVSSAEETAKDLLRVLSEKDLLRPHPERPGTAS 236
Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268
+ +G P+ + G
Sbjct: 237 PNRVFEATGDPEAFRALAARFLG 259
>gi|315640905|ref|ZP_07896001.1| glutamate racemase [Enterococcus italicus DSM 15952]
gi|315483323|gb|EFU73823.1| glutamate racemase [Enterococcus italicus DSM 15952]
Length = 272
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 50/260 (19%), Positives = 94/260 (36%), Gaps = 7/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I DSG+GGL V+++ +P + IY+ D PYG + +
Sbjct: 1 MDKNQPIGFIDSGVGGLTVVKEALKQLPNENIIYLGDTARCPYGPRPAEQVIAFTWE-MT 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L + VIACNTA + +E++ T +P + A T + I ++ T
Sbjct: 60 RFLLNKNIKMLVIACNTATAVALEEIKKTLSIPVIGVILPGSRAAIKATHTNQIGVIGTE 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ ++ + I ++ VE + + KK + E
Sbjct: 120 GTIKSASYERVLQEKSPKAKILSLACPKFVPIVE----SNQFQTSVAKKIVAESLRYFEK 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDD 247
+ D ++L CTHYP++ + + + V +D+ LL T
Sbjct: 176 QPVDTLILGCTHYPILRPLIQNVMGSKVKLIDSGAETVGEVSTLLDYFQMANTTLTTERS 235
Query: 248 HALFLSGKPDIAMRRLMQGF 267
+ +G + + +
Sbjct: 236 MTFYTTGSTKMFDQIAKEWL 255
>gi|27467761|ref|NP_764398.1| glutamate racemase [Staphylococcus epidermidis ATCC 12228]
gi|251810598|ref|ZP_04825071.1| glutamate racemase [Staphylococcus epidermidis BCM-HMP0060]
gi|282876402|ref|ZP_06285269.1| glutamate racemase [Staphylococcus epidermidis SK135]
gi|293366868|ref|ZP_06613544.1| glutamate racemase [Staphylococcus epidermidis M23864:W2(grey)]
gi|29839516|sp|Q8CPL0|MURI_STAES RecName: Full=Glutamate racemase
gi|27315305|gb|AAO04440.1|AE016746_230 glutamate racemase [Staphylococcus epidermidis ATCC 12228]
gi|251805758|gb|EES58415.1| glutamate racemase [Staphylococcus epidermidis BCM-HMP0060]
gi|281295427|gb|EFA87954.1| glutamate racemase [Staphylococcus epidermidis SK135]
gi|291319169|gb|EFE59539.1| glutamate racemase [Staphylococcus epidermidis M23864:W2(grey)]
gi|329730002|gb|EGG66393.1| glutamate racemase [Staphylococcus epidermidis VCU144]
gi|329734459|gb|EGG70772.1| glutamate racemase [Staphylococcus epidermidis VCU045]
gi|329736265|gb|EGG72537.1| glutamate racemase [Staphylococcus epidermidis VCU028]
Length = 267
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 56/260 (21%), Positives = 98/260 (37%), Gaps = 5/260 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +KK L
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIARCPYGPRPGEEVKKFTTELAQK- 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L ++ + VIACNTA + + L++ P P + A T++ + +L T T
Sbjct: 60 LMEFDIKMLVIACNTATAVALNYLQNILPIPVIGVIEPGARTAIMTTKNQNVLVLGTEGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ I +++ V+ VE+ + + I +
Sbjct: 120 IKSEAYRTHIKKINPNVNVYSVACPGFVPLVEQMRYKDPTITNIV---IHQTLKQWRNSD 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D ++L CTHYPL+ + + + AR LL N H + H
Sbjct: 177 ADTVILGCTHYPLLYQPIYEYFSGTKTVISSGLETAREVSALLTFSNEHASYTEHPQHRF 236
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
F +G + + +K
Sbjct: 237 FATGDTTHIKNIIDEWLNMK 256
>gi|116252373|ref|YP_768211.1| glutamate racemase [Rhizobium leguminosarum bv. viciae 3841]
gi|115257021|emb|CAK08115.1| putative glutamate racemase [Rhizobium leguminosarum bv. viciae
3841]
Length = 267
Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats.
Identities = 142/258 (55%), Positives = 191/258 (74%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+L+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK+R++ LF +L+
Sbjct: 9 KPVLVFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEQALKERVIGLFGRLLE 68
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++ P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++
Sbjct: 69 EHDPEVCIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 128
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI S+ QCH+ LV S LA E Y G + ++ + EI+ CF+EKEG++TD
Sbjct: 129 RAYTRDLIQSFAQQCHVRLVGSENLARMAEAYIRGDVVSDEAVLSEIDQCFVEKEGRKTD 188
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++VLACTHYP + ++FR+L+PWPVDWLD +++IARRAR L+P+I D A+F S
Sbjct: 189 IVVLACTHYPFMANLFRRLAPWPVDWLDPAEAIARRARTLVPQIADAVHPDNFDFAVFTS 248
Query: 254 GKPDIAMRRLMQGFGLKS 271
G PD A RRLMQGFGL +
Sbjct: 249 GNPDFATRRLMQGFGLST 266
>gi|147677257|ref|YP_001211472.1| glutamate racemase [Pelotomaculum thermopropionicum SI]
gi|146273354|dbj|BAF59103.1| glutamate racemase [Pelotomaculum thermopropionicum SI]
Length = 265
Score = 240 bits (613), Expect = 2e-61, Method: Composition-based stats.
Identities = 71/255 (27%), Positives = 117/255 (45%), Gaps = 7/255 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I FDSG+GGL V+++ R L+P FIY AD PYG+ L+KR + +L++
Sbjct: 6 PIGFFDSGVGGLSVMKEARALLPSEDFIYFADSAYCPYGDKPPEVLRKRAFAICDFLLER 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L VIACNT D++R S+ +G PA+K A + T++G I +L+T TL
Sbjct: 66 GT-RLIVIACNTISIAALDDVRRYV-SVPVVGIEPAVKPAVSATRNGKIGVLATGVTLAG 123
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ L+ Y ++ L VE + E + +E + D
Sbjct: 124 ERFNALVRRYGRGIEVYTQPCPGLVELVE----SGNWERPEAEIMLERYLGPLLARGVDT 179
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-ALFLS 253
+VL CTHYP + + +L+ V +D ++AR+ + +L + F S
Sbjct: 180 VVLGCTHYPFLRPLVEKLAGGGVTVIDTGRAVARQIKNVLEASGLASGKTAPGTERFFTS 239
Query: 254 GKPDIAMRRLMQGFG 268
+P++ + +G
Sbjct: 240 ARPEVVEPVVRALWG 254
>gi|283470360|emb|CAQ49571.1| glutamate racemase [Staphylococcus aureus subsp. aureus ST398]
Length = 266
Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats.
Identities = 56/260 (21%), Positives = 95/260 (36%), Gaps = 5/260 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARK- 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L ++ + VIACNTA + + L+ T P + A T++ + +L T T
Sbjct: 60 LMEFDIKMLVIACNTATAVALEYLQKTLSIPVIGVIEPGARTAIMTTRNQNVLVLGTEGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ I +H V+ VE+ + I +
Sbjct: 120 IKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYNDPTITSIV---IHQTLKRWRNSK 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D ++L CTHYPL+ + + AR LL N H + DH
Sbjct: 177 ADTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTEHPDHRF 236
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
F +G + + L
Sbjct: 237 FATGDTTHITNIIKEWLNLS 256
>gi|322373870|ref|ZP_08048405.1| glutamate racemase [Streptococcus sp. C150]
gi|321277242|gb|EFX54312.1| glutamate racemase [Streptococcus sp. C150]
Length = 271
Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats.
Identities = 56/258 (21%), Positives = 100/258 (38%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V+++++ +P +Y+ D PYG +++ L L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELKRQLPHESVVYIGDSARAPYGPRPAEQIREYTWQLV-RFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA ++ +E++ +P A +QSG I ++ TP T+
Sbjct: 62 LTKNVKMIVIACNTATAVVWEEIKEALDIPVLGVVLPGSSAAIKSSQSGKIGVIGTPMTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I Q + + A VE + + + + + +
Sbjct: 122 ASNIYEQKIKRLAPQMAVLSLPCPRFAPIVESNEIKSSVAKKIVYESMAPLVGK-----V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--AL 250
D +VL CTHYPL+ + + + V +D+ R LL +++R +D
Sbjct: 177 DTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAETVRDVSVLLNYFEINRSREVEDKTEEY 236
Query: 251 FLSGKPDIAMRRLMQGFG 268
+ + Q G
Sbjct: 237 YTTASVRGFKEIADQWLG 254
>gi|289167204|ref|YP_003445471.1| glutamate racemase, COG0796 [Streptococcus mitis B6]
gi|288906769|emb|CBJ21603.1| glutamate racemase, COG0796 [Streptococcus mitis B6]
Length = 264
Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats.
Identities = 54/257 (21%), Positives = 102/257 (39%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P +Y+ D PYG +++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIREYTWQLVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNTA ++ +E+++ +P A +Q G I ++ TP T+
Sbjct: 63 TK-DVKMIVIACNTATAVVWEEIKAQLDIPVLGVILPGASAAIKSSQGGKIGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
IH + ++ A VE A + + + + + +
Sbjct: 122 ESDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLRPLVGK-----V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HAL 250
D ++L CTHYPL+ + + + V +D+ R LL ++ R H
Sbjct: 177 DSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINRGRDARPLHHRF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
+ + + +
Sbjct: 237 YTTASSQSFAQIGEEWL 253
>gi|241204880|ref|YP_002975976.1| glutamate racemase [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240858770|gb|ACS56437.1| glutamate racemase [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 267
Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats.
Identities = 142/257 (55%), Positives = 191/257 (74%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+L+FDSGIGGL VL+++R LMPE FIYVADD GFPYG WE+ ALK+R++ LF +L+
Sbjct: 9 KPVLVFDSGIGGLTVLREVRVLMPERGFIYVADDAGFPYGGWEEQALKERVIGLFGRLLE 68
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++ P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++
Sbjct: 69 EHDPEVCIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 128
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI S+ QCH+ LV S LA E Y G + ++ + EI+ CF+EKEG++TD
Sbjct: 129 RAYTRDLIQSFAQQCHVRLVGSENLARMAEAYIRGDAVSDEAVLTEIDQCFVEKEGRKTD 188
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++VLACTHYP + ++FR+L+PWPVDWLD +++IARRAR L+P+I D A+F S
Sbjct: 189 IVVLACTHYPFMANLFRRLAPWPVDWLDPAEAIARRARTLVPQIADAVHPDNFDFAVFTS 248
Query: 254 GKPDIAMRRLMQGFGLK 270
G PD A RRLMQGFGL
Sbjct: 249 GNPDFATRRLMQGFGLS 265
>gi|225575569|ref|ZP_03784179.1| hypothetical protein RUMHYD_03661 [Blautia hydrogenotrophica DSM
10507]
gi|225037202|gb|EEG47448.1| hypothetical protein RUMHYD_03661 [Blautia hydrogenotrophica DSM
10507]
Length = 273
Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats.
Identities = 52/259 (20%), Positives = 98/259 (37%), Gaps = 10/259 (3%)
Query: 10 KKLQN--SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+L + +FDSGIGGL V +++ +P +Y D PYG+ + + +
Sbjct: 1 MRLDREAPVGVFDSGIGGLTVAREIMRNLPSEKIVYFGDTARVPYGSKSKDTVLRYSRQI 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
L+ V+ACNTA E++ + AA T + + ++
Sbjct: 61 I-RFLETENVKAIVVACNTASAFALSEIQKEMNLPIIGVIEAGARVAAETTMNKKVGVIG 119
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+ + S + ++ + VEE + E+ E E
Sbjct: 120 TEGTIHSGIHERWLKSLDQEITVYGKPCPLFVPLVEEGWLKDPVTEEI----AERYLREL 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR---V 244
K D ++L CTHYPL+ + +++ V ++ + A + LL + N T
Sbjct: 176 LEKEVDTLILGCTHYPLLRSLIQKVVGPEVKLVNPAYETALELKKLLSQENLLSTGRGQE 235
Query: 245 FDDHALFLSGKPDIAMRRL 263
+ ++S + +
Sbjct: 236 EFPYRFYVSDLAEKFRKFA 254
>gi|331002651|ref|ZP_08326166.1| glutamate racemase [Lachnospiraceae oral taxon 107 str. F0167]
gi|330407064|gb|EGG86568.1| glutamate racemase [Lachnospiraceae oral taxon 107 str. F0167]
Length = 267
Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats.
Identities = 58/254 (22%), Positives = 100/254 (39%), Gaps = 6/254 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I IFDSG+GGL V +++ MP+ +Y D PYG+ + K +
Sbjct: 1 MNLPIGIFDSGVGGLTVAKEIVAQMPDESTVYFGDTARVPYGSKSGDTIIKYSRQIV-KF 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L VIACNTA D L++ A T+ G I ++ T T
Sbjct: 60 LQTKNVKAIVIACNTASAFALDILKTEIDIPIMGVIHAGAVTAIKTTKVGRIGVVGTEGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ I ++ + + +L VE+ ++ ++ I E + +
Sbjct: 120 ISSGIYKKTIQDINNELEVIQKACPLLVPLVEDGLINDRVTDEI----ISRYVSELKSRH 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-HAL 250
D +VL CTHYPL+ F ++ V ++ + A+ + LL + N T+ H
Sbjct: 176 IDSLVLGCTHYPLLYKTFGRIMGEGVSLVNPAYETAKELKSLLEQKNLCATKDGGIFHDF 235
Query: 251 FLSGKPDIAMRRLM 264
++S +
Sbjct: 236 YVSDMAERFSDFAS 249
>gi|256824843|ref|YP_003148803.1| glutamate racemase [Kytococcus sedentarius DSM 20547]
gi|256688236|gb|ACV06038.1| glutamate racemase [Kytococcus sedentarius DSM 20547]
Length = 285
Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats.
Identities = 54/255 (21%), Positives = 89/255 (34%), Gaps = 7/255 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL V + + +P +Y+ D PYG +++ + L
Sbjct: 5 PIGIFDSGLGGLTVARAVIDHLPHESTVYLGDTHHAPYGPRPIAEVRRLALDSLDA-LMD 63
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
VIACN+A + + R + PA ++AA T++G + ++ST AT
Sbjct: 64 RGVKALVIACNSASAAVLHDARERYSVPVIEVIRPAARRAAGITRTGAVGVISTQATHTS 123
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + + VE I E+ + D
Sbjct: 124 GAYRDAFAAV-PSVQLRSQPCPRFVHFVE----SGTISGPEVFAAATEYLQPLKEAGVDT 178
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALFLS 253
++L CTHYPL+ V V + +++ A L H +
Sbjct: 179 LILGCTHYPLLRGVIAYEMGPEVSLVSSAEETAAELLRTLADRGELAPDATVPTHEFLTT 238
Query: 254 GKPDIAMRRLMQGFG 268
G P + G
Sbjct: 239 GDPSQFSELARRFLG 253
>gi|329766985|ref|ZP_08258513.1| glutamate racemase [Gemella haemolysans M341]
gi|328837710|gb|EGF87335.1| glutamate racemase [Gemella haemolysans M341]
Length = 264
Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats.
Identities = 55/257 (21%), Positives = 95/257 (36%), Gaps = 5/257 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ N+I +FDSG+GGL V +++ +P Y D PYG+ + K
Sbjct: 1 MNNAIGVFDSGVGGLTVAREIMRQLPNETIYYFGDVKNCPYGDKTREEIIKYTDRAV-KY 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + V+ACNTA + L+ + P ++A T++ + +L T T
Sbjct: 60 LIDKGVKMVVLACNTATAAALNYLQDKYDIPIIGVVQPGARRAIQATENNKVLVLGTKFT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ I + S + + +E + +D KK I
Sbjct: 120 AKSKVYDIEIENINSDIQVVDKACPAFVPFIE---SEGNVDKDATKKIIHETLENTRNLG 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHAL 250
D +VL CTHYP++ + + + + AR +L HQ R DH
Sbjct: 177 VDTVVLGCTHYPILKKDIEEYYGNNIKVISSGREAAREVSSVLGYAKLHQKRFNKKDHEF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
++S + +
Sbjct: 237 YISEASENFNNIASKWL 253
>gi|256750841|ref|ZP_05491725.1| glutamate racemase [Thermoanaerobacter ethanolicus CCSD1]
gi|256750176|gb|EEU63196.1| glutamate racemase [Thermoanaerobacter ethanolicus CCSD1]
Length = 264
Score = 240 bits (612), Expect = 2e-61, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 107/258 (41%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL VL+++ ++P +IY D PYG+ + +KK + + +
Sbjct: 3 SRPIGVFDSGVGGLTVLKRLVEVLPGEDYIYFGDTKRVPYGDRSEEEIKKFAKQILNFMR 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACNT +I +S + + F + A YT + I +++T T+
Sbjct: 63 -EQKVKAVVIACNTTCAVIN---KSEYDVVLFDVLKAGAESAVLYTINKKIGVIATTRTV 118
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I ++ + +E+ + C E + K
Sbjct: 119 ESKSYEKNIKIIDKNIEVYQKACPEFVPLIEKGLYN----SPIAYETASKCLKELKEKDI 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTHYPL+ V ++ V +D + +A + L + + ++ F+
Sbjct: 175 DTLVLGCTHYPLMASVIEEIMGENVKIVDPAIKLAYDVKDYLLKKDLLNPQIRGKAEFFV 234
Query: 253 SGKPDIAMRRLMQGFGLK 270
SG D ++ G K
Sbjct: 235 SGDKDNFIKTAEMLLGEK 252
>gi|163753921|ref|ZP_02161044.1| glutamate racemase [Kordia algicida OT-1]
gi|161326135|gb|EDP97461.1| glutamate racemase [Kordia algicida OT-1]
Length = 259
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 72/260 (27%), Positives = 119/260 (45%), Gaps = 7/260 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I IFDSG+GG + +++ +P H IY+AD PYG + + +++L
Sbjct: 3 NSPIGIFDSGVGGTSIWREIHKRLPSEHTIYLADSKNAPYGPKGKEKIIDLSVKN-TELL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + V+ACNTA T LR + + F+G PAIK AA T+SG I IL+T TL
Sbjct: 62 LKKGCKMIVVACNTATTNAIRHLRKNY-DVPFIGIEPAIKPAALQTKSGTIGILATKGTL 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
Y + I L +E KI+ E++K ++
Sbjct: 121 SSELFHKTSDLYANGVQIIEQVGEGLVPLIE----NGKIESPEMEKLLKLYLTPMLHANI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHALF 251
D +VL C+HYP ++ + P V +D+ ++AR+ +L + + Q + +
Sbjct: 177 DYLVLGCSHYPYLIPKLQSFLPKHVKIIDSGIAVARQTEAILAKHDLSTQEETRGNCIFY 236
Query: 252 LSGKPDIAMRRLMQGFGLKS 271
+G P+I L F +++
Sbjct: 237 SNGNPEILQHILKHDFSVEA 256
>gi|116750432|ref|YP_847119.1| glutamate racemase [Syntrophobacter fumaroxidans MPOB]
gi|116750474|ref|YP_847161.1| glutamate racemase [Syntrophobacter fumaroxidans MPOB]
gi|116699496|gb|ABK18684.1| glutamate racemase [Syntrophobacter fumaroxidans MPOB]
gi|116699538|gb|ABK18726.1| glutamate racemase [Syntrophobacter fumaroxidans MPOB]
Length = 275
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 57/271 (21%), Positives = 110/271 (40%), Gaps = 6/271 (2%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M D + ++I +FDSGIGGL V++ + +P IY D PYG +
Sbjct: 1 MCHDMNFVKPDSNSAIGVFDSGIGGLTVVRALMERLPFESIIYFGDTARVPYGVKSVDTI 60
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
K + ++ L + Q L ++ACNT + ++ + P A T++
Sbjct: 61 SKFAGEI-TEFLLRQQVKLLIVACNTMAAVAREVIVGLSPVPVLDVIDAGASSAVEATRA 119
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+ ++ TPAT+ + IH + + I + + VE + +
Sbjct: 120 RYVGVIGTPATINSNAYARAIHRHDAGIRIFSQACPLFVPLVE----EGWLDHPVTRLTA 175
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ D +VL CTHYPL+ + +++ + +D+++++A R +L ++
Sbjct: 176 REYLRPVTTHQIDTLVLGCTHYPLLKPLLQKVVGKDIHLVDSAEAMAERTAAVLTEMDLW 235
Query: 241 Q-TRVFDDHALFLSGKPDIAMRRLMQGFGLK 270
+ D+ F+S P + G
Sbjct: 236 NRSASPPDYRFFVSDVPLRFQGIGERFLGRS 266
>gi|167038101|ref|YP_001665679.1| glutamate racemase [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|307266301|ref|ZP_07547841.1| glutamate racemase [Thermoanaerobacter wiegelii Rt8.B1]
gi|320116507|ref|YP_004186666.1| glutamate racemase [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|229486282|sp|B0KBP8|MURI_THEP3 RecName: Full=Glutamate racemase
gi|166856935|gb|ABY95343.1| glutamate racemase [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|306918679|gb|EFN48913.1| glutamate racemase [Thermoanaerobacter wiegelii Rt8.B1]
gi|319929598|gb|ADV80283.1| glutamate racemase [Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 264
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 108/258 (41%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL VL+++ ++P +IY D PYG+ + +KK + + +
Sbjct: 3 SRPIGVFDSGVGGLTVLKRLVEVLPGEDYIYFGDTKRVPYGDRSEEEIKKFAKQILNFMR 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACNT +I +S + + F + AA YT + I +++T T+
Sbjct: 63 -EQKVKAVVIACNTTCAVIN---KSEYDVVLFDVLKAGAESAALYTINKKIGVIATTRTV 118
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I ++ + +E+ + C E + K
Sbjct: 119 ESKSYEKNIKIIDKNIEVYQKACPEFVPLIEKGLYN----SPIAYETASKCLKELKEKDI 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTHYPL+ V ++ V +D + +A + L + + ++ F+
Sbjct: 175 DTLVLGCTHYPLMASVIEEIMGENVKIVDPAIKLAYDVKDYLLKKDLLNPQIRGKAEFFV 234
Query: 253 SGKPDIAMRRLMQGFGLK 270
SG D ++ G K
Sbjct: 235 SGDKDNFIKTAEMLLGEK 252
>gi|297583708|ref|YP_003699488.1| glutamate racemase [Bacillus selenitireducens MLS10]
gi|297142165|gb|ADH98922.1| glutamate racemase [Bacillus selenitireducens MLS10]
Length = 280
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 55/257 (21%), Positives = 93/257 (36%), Gaps = 6/257 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+Q I + DSG+GGL V+ ++ +P+ IY+ D PYG + + +
Sbjct: 1 MQRPIGVIDSGVGGLTVVSELMRQLPKEEIIYIGDTKRCPYGPRPAFEVAEYTWEMID-Y 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L L VIACNTA ++ D+ R P A T++ + ++ T T
Sbjct: 60 LMSRDIKLLVIACNTASAVVLDDARQALDIPVIGVIHPGAVAALKATENLEVGVIGTEGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + S + + ++ L VE +E K I
Sbjct: 120 ISSGAYYEELKSIHNDVKVVSLACPTLVPLVESNRY----TGEEAKAVIREALEPMLDYP 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHAL 250
D ++L CTHYP+I + + + + + D AR LL T H
Sbjct: 176 VDSLILGCTHYPMIEREIQDVVGEDIHVICSGDETARAVSTLLYHEQLLYTGERRPRHLF 235
Query: 251 FLSGKPDIAMRRLMQGF 267
+ +G +
Sbjct: 236 YTTGAKAMFQSIAESWL 252
>gi|118470579|ref|YP_889158.1| glutamate racemase [Mycobacterium smegmatis str. MC2 155]
gi|166231042|sp|A0R1X0|MURI_MYCS2 RecName: Full=Glutamate racemase
gi|118171866|gb|ABK72762.1| glutamate racemase [Mycobacterium smegmatis str. MC2 155]
Length = 277
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 106/260 (40%), Gaps = 12/260 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL V + + +P+ +YV D PYG ++ + + D L
Sbjct: 7 PIGIFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPQIRAHSLAIGDD-LVS 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
VIACNTA + + R + + + + PA+++A A T++G I ++ T AT+
Sbjct: 66 RGVKALVIACNTASSACLRDARERYSPVPVVEVILPAVRRAVAATRNGRIGVIGTQATIA 125
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + + V+ VE + ++ EG + D
Sbjct: 126 SGAYQDAFAA-ARDTEVFTVACPRFVDFVERGVTSGR----QVLGLAEGYLEPLQLAEVD 180
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-----H 248
+VL CTHYP++ + + V + +++ A+ +L ++ + D
Sbjct: 181 TLVLGCTHYPMLSGLIQLAMGDNVTLVSSAEETAKDLLRVLTELDLLRPHPDDPSVTAVR 240
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+G P+ + G
Sbjct: 241 RFEATGDPEAFTALAARFLG 260
>gi|55822242|ref|YP_140683.1| glutamate racemase [Streptococcus thermophilus CNRZ1066]
gi|116627188|ref|YP_819807.1| glutamate racemase [Streptococcus thermophilus LMD-9]
gi|81559855|sp|Q5M1I5|MURI_STRT1 RecName: Full=Glutamate racemase
gi|122268209|sp|Q03MG1|MURI_STRTD RecName: Full=Glutamate racemase
gi|55738227|gb|AAV61868.1| glutamate racemase [Streptococcus thermophilus CNRZ1066]
gi|116100465|gb|ABJ65611.1| glutamate racemase [Streptococcus thermophilus LMD-9]
Length = 271
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 56/258 (21%), Positives = 101/258 (39%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V+++++ +P +Y+ D PYG +++ L L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELKRQLPHESIVYIGDSARAPYGPRPAGQIREYTWQLV-KFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA ++ +E++ + +P A ++SG I ++ TP T+
Sbjct: 62 LTKDVKMIVIACNTATAVVWEEIKESLDIPVLGVVLPGSSAAIKSSRSGQIGVIGTPMTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I Q ++ +S A VE + + + + + R
Sbjct: 122 SSNIYEQKIKRLAPQMNVLSLSCPRFAPIVESNEINSSVAKKIVYESMAPLVD-----RV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFDDHAL 250
D +VL CTHYPL+ + + + V +D+ R LL +++R
Sbjct: 177 DTLVLGCTHYPLLRPIIQNVMGLSVKLIDSGAETVRDVSVLLNYFEINRSREVKDKTEEY 236
Query: 251 FLSGKPDIAMRRLMQGFG 268
+ + Q G
Sbjct: 237 YTTASVLGFKEIAEQWLG 254
>gi|49483313|ref|YP_040537.1| glutamate racemase [Staphylococcus aureus subsp. aureus MRSA252]
gi|257425201|ref|ZP_05601627.1| glutamate racemase [Staphylococcus aureus subsp. aureus 55/2053]
gi|257427864|ref|ZP_05604262.1| glutamate racemase [Staphylococcus aureus subsp. aureus 65-1322]
gi|257430499|ref|ZP_05606881.1| glutamate racemase [Staphylococcus aureus subsp. aureus 68-397]
gi|257433261|ref|ZP_05609619.1| glutamate racemase [Staphylococcus aureus subsp. aureus E1410]
gi|257436100|ref|ZP_05612147.1| glutamate racemase [Staphylococcus aureus subsp. aureus M876]
gi|258423807|ref|ZP_05686693.1| glutamate racemase [Staphylococcus aureus A9635]
gi|282903699|ref|ZP_06311587.1| glutamate racemase [Staphylococcus aureus subsp. aureus C160]
gi|282905467|ref|ZP_06313322.1| glutamate racemase [Staphylococcus aureus subsp. aureus Btn1260]
gi|282908441|ref|ZP_06316272.1| glutamate racemase [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282910725|ref|ZP_06318528.1| glutamate racemase [Staphylococcus aureus subsp. aureus WBG10049]
gi|282913925|ref|ZP_06321712.1| glutamate racemase [Staphylococcus aureus subsp. aureus M899]
gi|282918848|ref|ZP_06326583.1| glutamate racemase [Staphylococcus aureus subsp. aureus C427]
gi|282923970|ref|ZP_06331646.1| glutamate racemase [Staphylococcus aureus subsp. aureus C101]
gi|283957893|ref|ZP_06375344.1| glutamate racemase [Staphylococcus aureus subsp. aureus A017934/97]
gi|293500960|ref|ZP_06666811.1| glutamate racemase [Staphylococcus aureus subsp. aureus 58-424]
gi|293509917|ref|ZP_06668626.1| glutamate racemase [Staphylococcus aureus subsp. aureus M809]
gi|293526504|ref|ZP_06671189.1| glutamate racemase [Staphylococcus aureus subsp. aureus M1015]
gi|295427637|ref|ZP_06820269.1| glutamate racemase [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297591408|ref|ZP_06950046.1| glutamate racemase [Staphylococcus aureus subsp. aureus MN8]
gi|56749237|sp|Q6GHT5|MURI_STAAR RecName: Full=Glutamate racemase
gi|49241442|emb|CAG40126.1| putative glutamate racemase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257272177|gb|EEV04309.1| glutamate racemase [Staphylococcus aureus subsp. aureus 55/2053]
gi|257274705|gb|EEV06192.1| glutamate racemase [Staphylococcus aureus subsp. aureus 65-1322]
gi|257278627|gb|EEV09246.1| glutamate racemase [Staphylococcus aureus subsp. aureus 68-397]
gi|257281354|gb|EEV11491.1| glutamate racemase [Staphylococcus aureus subsp. aureus E1410]
gi|257284382|gb|EEV14502.1| glutamate racemase [Staphylococcus aureus subsp. aureus M876]
gi|257846039|gb|EEV70067.1| glutamate racemase [Staphylococcus aureus A9635]
gi|282313942|gb|EFB44334.1| glutamate racemase [Staphylococcus aureus subsp. aureus C101]
gi|282316658|gb|EFB47032.1| glutamate racemase [Staphylococcus aureus subsp. aureus C427]
gi|282321993|gb|EFB52317.1| glutamate racemase [Staphylococcus aureus subsp. aureus M899]
gi|282325330|gb|EFB55639.1| glutamate racemase [Staphylococcus aureus subsp. aureus WBG10049]
gi|282328106|gb|EFB58388.1| glutamate racemase [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282330759|gb|EFB60273.1| glutamate racemase [Staphylococcus aureus subsp. aureus Btn1260]
gi|282595317|gb|EFC00281.1| glutamate racemase [Staphylococcus aureus subsp. aureus C160]
gi|283790042|gb|EFC28859.1| glutamate racemase [Staphylococcus aureus subsp. aureus A017934/97]
gi|290920576|gb|EFD97639.1| glutamate racemase [Staphylococcus aureus subsp. aureus M1015]
gi|291095965|gb|EFE26226.1| glutamate racemase [Staphylococcus aureus subsp. aureus 58-424]
gi|291467367|gb|EFF09884.1| glutamate racemase [Staphylococcus aureus subsp. aureus M809]
gi|295127995|gb|EFG57629.1| glutamate racemase [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297576294|gb|EFH95010.1| glutamate racemase [Staphylococcus aureus subsp. aureus MN8]
gi|312438474|gb|ADQ77545.1| glutamate racemase [Staphylococcus aureus subsp. aureus TCH60]
gi|315193821|gb|EFU24216.1| putative glutamate racemase [Staphylococcus aureus subsp. aureus
CGS00]
Length = 266
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 56/260 (21%), Positives = 95/260 (36%), Gaps = 5/260 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARK- 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L ++ + VIACNTA + + L+ T P + A T++ + +L T T
Sbjct: 60 LMEFDIKMLVIACNTATAVALEYLQKTLSIPVIGVIEPGARTAIMTTRNQNVLVLGTEGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ I +H V+ VE+ + I
Sbjct: 120 IKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYSDPTITSIV---IHQTLKRWRNSE 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
+D ++L CTHYPL+ + + AR LL N H + DH
Sbjct: 177 SDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTEHPDHRF 236
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
F +G + + L
Sbjct: 237 FATGDTTHITNIIKEWLNLS 256
>gi|16330377|ref|NP_441105.1| glutamate racemase [Synechocystis sp. PCC 6803]
gi|2492985|sp|P73737|MURI_SYNY3 RecName: Full=Glutamate racemase
gi|1652867|dbj|BAA17785.1| glutamate racemase [Synechocystis sp. PCC 6803]
Length = 279
Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats.
Identities = 55/260 (21%), Positives = 105/260 (40%), Gaps = 7/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ ++ I +FDSG+GGL VL+++ +P+ +Y D PYG + + + + +
Sbjct: 3 EPQRSRIGVFDSGVGGLTVLRELYRQLPKESILYFGDTARLPYGKRSPQVILQYVREILT 62
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ + + + ++ACNT+ L + ++ F +P + A Q I ++STP
Sbjct: 63 WMAAE-EVKMVIMACNTSSALALETVQQEFNMPILGVILPGARAAVR--QGRRIGVISTP 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT + IH + ++ +E+ + K G
Sbjct: 120 ATAASNAYRHAIHEITPDALVWQMACPEFVPLIEQNRLHDPYTLEVAK----GYLQPLLD 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D +V CTHY + VF+Q+ P + +D + + + AR L + + +
Sbjct: 176 ADIDTLVFGCTHYRHLTPVFQQILPSHIRLVDPASHVVKAARQELEVMGLRNSEMSIATR 235
Query: 250 LFLSGKPDIAMRRLMQGFGL 269
+SG P Q G
Sbjct: 236 FTVSGCPQQFAELSHQWLGF 255
>gi|82750757|ref|YP_416498.1| glutamate racemase [Staphylococcus aureus RF122]
gi|123549008|sp|Q2YXC5|MURI_STAAB RecName: Full=Glutamate racemase
gi|82656288|emb|CAI80702.1| glutamate racemase [Staphylococcus aureus RF122]
Length = 266
Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats.
Identities = 56/260 (21%), Positives = 94/260 (36%), Gaps = 5/260 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARK- 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + + VIACNTA + + L+ T P + A T++ + +L T T
Sbjct: 60 LMGFDIKMLVIACNTATAVALEYLQKTLSIPVIGVIEPGARTAIMTTRNQNVLVLGTEGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ I +H V+ VE+ + I
Sbjct: 120 IKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYSDPTITSIV---IHQTLKRWRNSE 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
+D ++L CTHYPL+ + + AR LL N H + DH
Sbjct: 177 SDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTEHPDHRF 236
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
F +G + + L
Sbjct: 237 FATGDTTHITNIIKEWLNLS 256
>gi|282891233|ref|ZP_06299736.1| hypothetical protein pah_c048o068 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498926|gb|EFB41242.1| hypothetical protein pah_c048o068 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 280
Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats.
Identities = 66/257 (25%), Positives = 109/257 (42%), Gaps = 6/257 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
N I +FDSGIGGL V++ + L+P +Y D FPYGN + + +
Sbjct: 9 NNNPIGMFDSGIGGLTVMRAVMQLLPYESVLYFGDTAHFPYGNNAAETIIQYSLANA-HF 67
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + L VIACNTA L+ F P+I+ A A TQSG I++L T T
Sbjct: 68 LMEQDIKLLVIACNTASAFAFSTLQDQFLIPIIDVISPSIEAAIAQTQSGSIAVLGTKGT 127
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R I + Q + ++ +LA VE ++ + ++ +
Sbjct: 128 IRSGVYKQKILDLMPQARVVSLACPLLAPLVE----EQWLEHPATRLIVQEYLQPLKKSD 183
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-AL 250
D ++L CTHYPL+ + + V +D++ + A + +L + H
Sbjct: 184 VDTLILGCTHYPLLKSLIEEEMEGQVKIIDSASACALKVEEILGNQQLQSLKEKTPHFRY 243
Query: 251 FLSGKPDIAMRRLMQGF 267
++S P+ + Q
Sbjct: 244 YVSDDPERFQQAGEQFL 260
>gi|315658541|ref|ZP_07911413.1| glutamate racemase [Staphylococcus lugdunensis M23590]
gi|315496870|gb|EFU85193.1| glutamate racemase [Staphylococcus lugdunensis M23590]
Length = 269
Score = 239 bits (611), Expect = 3e-61, Method: Composition-based stats.
Identities = 56/260 (21%), Positives = 91/260 (35%), Gaps = 5/260 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K + I + DSG+GGL V +++ +P Y+ D PYG +K L
Sbjct: 1 MKNMNKPIGVIDSGVGGLTVAKEIIRQLPNETIYYLGDIARCPYGPRPGEEVKAFTTELA 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L ++ + VIACNTA + + L+ P + A T++ + IL T
Sbjct: 61 NK-LMEFDIKMLVIACNTATAVALEHLQHILSIPVIGVIEPGARTAIMTTKNQHVLILGT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ + I + V+ VE+ I I
Sbjct: 120 EGTIKSEAYRHHIKRINPNVEVTGVACPGFVPLVEQMRYNDPTITSII---IHQTLKHWR 176
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDD 247
D ++L CTHYPL+ + + AR LL N H +
Sbjct: 177 NSIADTVILGCTHYPLLYQPLNDYFGGDKTVISSGLETAREVSALLTFSNEHASYTAQPQ 236
Query: 248 HALFLSGKPDIAMRRLMQGF 267
H F +G + +
Sbjct: 237 HRFFSTGDTTHITNIIAEWL 256
>gi|312277667|gb|ADQ62324.1| Glutamate racemase [Streptococcus thermophilus ND03]
Length = 271
Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats.
Identities = 56/258 (21%), Positives = 100/258 (38%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V+++++ +P +Y+ D PYG +++ L L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELKRQLPHESIVYIGDSARAPYGPRPAGQIREYTWQLV-KFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA ++ +E++ +P A ++SG I ++ TP T+
Sbjct: 62 LTKDVKMIVIACNTATAVVWEEIKEALDIPVLGVVLPGSSAAIKSSRSGQIGVIGTPMTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I Q ++ +S A VE + + + + + R
Sbjct: 122 SSNIYEQKIKRLAPQMNVLSLSCPRFAPIVESNEINSSVAKKIVYESMAPLVD-----RV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFDDHAL 250
D +VL CTHYPL+ + + + V +D+ R LL +++R
Sbjct: 177 DTLVLGCTHYPLLRPIIQNVMGLSVKLIDSGAETVRDVSVLLNYFEINRSREVKDKTEEY 236
Query: 251 FLSGKPDIAMRRLMQGFG 268
+ + Q G
Sbjct: 237 YTTASVLGFKEIAEQWLG 254
>gi|213965871|ref|ZP_03394062.1| glutamate racemase [Corynebacterium amycolatum SK46]
gi|213951449|gb|EEB62840.1| glutamate racemase [Corynebacterium amycolatum SK46]
Length = 288
Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats.
Identities = 57/257 (22%), Positives = 105/257 (40%), Gaps = 9/257 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL V + + +P +Y+ D PYG +++ + + L
Sbjct: 26 PIGIFDSGVGGLTVARAIMDQLPHESIMYIGDTANGPYGPLRIAEVRQHAEAIADE-LVA 84
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ VIACNTA + R +P +PA+++A + T++G + ++ T AT+R
Sbjct: 85 RGCKMIVIACNTASAAFLRDARERYPVPVVEVILPAVRRAVSTTRNGKVGVIGTAATIRS 144
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+L + + V VE + +I EG + D
Sbjct: 145 RAYQDLFDAV-PGVDVSAVDCPRFVDFVERGITSGR----QILGLAEGYLAPLQADGVDT 199
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH---QTRVFDDHALF 251
+VL CTHYPL+ V + V + +++ ++ +L + + ++
Sbjct: 200 LVLGCTHYPLLSGVIQLAMGEDVALVSSAEETSKDVLRILTKTDMLADPESNPNPVRTFE 259
Query: 252 LSGKPDIAMRRLMQGFG 268
+G P + + G
Sbjct: 260 STGDPQVFASLAKRFLG 276
>gi|159036256|ref|YP_001535509.1| glutamate racemase [Salinispora arenicola CNS-205]
gi|157915091|gb|ABV96518.1| glutamate racemase [Salinispora arenicola CNS-205]
Length = 293
Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats.
Identities = 56/260 (21%), Positives = 95/260 (36%), Gaps = 10/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + +P +Y+ D PYG +++ + L
Sbjct: 3 DAPIGIFDSGVGGLTVARALTDQLPGEDLVYLGDTAHVPYGPKPIADVRRHALACLDQ-L 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
L VIACN+A + R + PA+++A A T++G + ++ T AT+
Sbjct: 62 MDAGAKLLVIACNSAAAACLHDARERYSVPVVEVIRPAVRRAVAATRNGRVGVIGTSATI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + V+ VE + +
Sbjct: 122 TSGAYEDAFAA-APHITVTGVACPEFVEFVERGITSG----SALHSIAQRYLTPLRASGI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR----INTHQTRVFDDH 248
D +VL CTHYPL+ + + V + ++D A++ LL H
Sbjct: 177 DTLVLGCTHYPLLAGLLNLVMGNGVTLVSSADEAAKKVYRLLTEGVVPRRADDESRPARH 236
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+G P R + G
Sbjct: 237 RFIATGDPAPFERLTSRFLG 256
>gi|210614803|ref|ZP_03290332.1| hypothetical protein CLONEX_02546 [Clostridium nexile DSM 1787]
gi|210150572|gb|EEA81581.1| hypothetical protein CLONEX_02546 [Clostridium nexile DSM 1787]
Length = 275
Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats.
Identities = 60/266 (22%), Positives = 101/266 (37%), Gaps = 13/266 (4%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M IDN K + +FDSG+GGL V +++ +P + +Y D PYG+ +
Sbjct: 1 MSIDN-----KNAAPVGVFDSGVGGLTVAREIMRQLPNENLVYFGDTARVPYGSKSRDNI 55
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+ + L VIACNTA L D +R P + A TQ+
Sbjct: 56 IRYSRQII-HFLKTKGVKAIVIACNTASALALDVVREESDIPIIGVVEPGARAALQITQT 114
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I ++ T AT++ +I + + + VEE K+ E+ I
Sbjct: 115 KKIGVIGTEATVQSAMYGKIIKGLDPTVSVIGKACPLFVPLVEEGFAKHKVTEEI----I 170
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ + D ++L CTHYPL+ R + ++ + A + +L
Sbjct: 171 DYYLASMKESDIDSLILGCTHYPLLRSRIRAYLGDKIQLVNPAYETAMDLKYILKESGME 230
Query: 241 QTRVFDDHA---LFLSGKPDIAMRRL 263
+HA ++S D +
Sbjct: 231 NAGKEGEHATYSFYVSDAADKFKQFA 256
>gi|289422435|ref|ZP_06424278.1| glutamate racemase [Peptostreptococcus anaerobius 653-L]
gi|289157007|gb|EFD05629.1| glutamate racemase [Peptostreptococcus anaerobius 653-L]
Length = 268
Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats.
Identities = 52/256 (20%), Positives = 93/256 (36%), Gaps = 6/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL VL+++ + +Y D PYG + K + L
Sbjct: 3 NRPIGVFDSGLGGLTVLREIHKRLANEDTVYFGDTARVPYGPRSKETIIKYTFQAIN-FL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA +E ++ + + A YT + ++ ++ T T+
Sbjct: 62 IQQDVKAIVIACNTATARALEEAKAEYNVPIIGVIEAGARSAVEYTNNKVVGVIGTLGTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
N I S + + + VEE +I E K
Sbjct: 122 NSKAYVNTIRSMDESIRVIDKACPLFVPLVEEGWANEEISSTAAHM----YLDELVEKGV 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-ALF 251
D IVL CTHYP++ + ++ + A + +L + N + + +
Sbjct: 178 DSIVLGCTHYPILKRTIGMAVGQEIKLINPAKETALELKEILNQANLLNDKADEGVCKYY 237
Query: 252 LSGKPDIAMRRLMQGF 267
+S + + +
Sbjct: 238 VSDINEQFSKVASEFM 253
>gi|225571415|ref|ZP_03780411.1| hypothetical protein CLOHYLEM_07513 [Clostridium hylemonae DSM
15053]
gi|225159891|gb|EEG72510.1| hypothetical protein CLOHYLEM_07513 [Clostridium hylemonae DSM
15053]
Length = 273
Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 103/256 (40%), Gaps = 6/256 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K I +FDSG+GGL V +++ +P+ + +Y D PYG+ + + + +
Sbjct: 4 NKDRTAPIGVFDSGVGGLTVAREIMRQLPDENIVYFGDTARVPYGSKSRNNIIRFSRQII 63
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
L+ VIACNTA L D ++ VP + A T+S I ++ T
Sbjct: 64 -RFLETKGVKAIVIACNTASALALDVVKEESGIPIIGVIVPGARAAVKETKSKKIGVVGT 122
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ S +I + + + VEE + ++ IE E +
Sbjct: 123 EATIQSHTYSKVITDMEPEASVIGKPCPLFVPLVEEGFAKHHVTDEI----IEYYLDEMK 178
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDD 247
D ++L CTHYPL+ + V+ ++ + A + LL + + +
Sbjct: 179 HSDIDTMILGCTHYPLLRSRIMEYFGENVNIVNPAYETAMDLKALLAEHDMENNSGSLAR 238
Query: 248 HALFLSGKPDIAMRRL 263
+ ++S +
Sbjct: 239 YEFYVSDTAEKFKHFA 254
>gi|323136843|ref|ZP_08071924.1| glutamate racemase [Methylocystis sp. ATCC 49242]
gi|322398160|gb|EFY00681.1| glutamate racemase [Methylocystis sp. ATCC 49242]
Length = 267
Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats.
Identities = 112/266 (42%), Positives = 167/266 (62%), Gaps = 6/266 (2%)
Query: 12 LQNS--ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ IL+FDSG+GGL V ++ + P ++Y ADD GFPYG+W++ L R+M +
Sbjct: 1 MNRPPRILVFDSGLGGLTVFAEIVKIRPGADYVYCADDAGFPYGSWKEPELVDRVMKVME 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
++ ++ P + VIACNTA TL+ LR+ +P + F+G VPAIK AA +++S +IS+L+TP
Sbjct: 61 RLIAEHAPDMVVIACNTASTLVLPCLRARWPEIPFVGTVPAIKPAAEHSRSKMISVLATP 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ R YT NLI + + C + LV S LA E Y + ++EI EI CF E +G
Sbjct: 121 GTVARDYTQNLIAQFAADCRVALVGSTTLARLAENYMHHGSVCDEEIAAEIAPCFQESDG 180
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP---RINTHQTRVFD 246
+RTDV+VLACTHYPL++ F++L+PWPV+W+D + +IARRA LL + + R
Sbjct: 181 RRTDVVVLACTHYPLLLDAFQRLAPWPVEWIDPAPAIARRADQLLAGRFGRDESEPRAAP 240
Query: 247 DHALFLSG-KPDIAMRRLMQGFGLKS 271
A+F SG P +R + +GL +
Sbjct: 241 GRAVFTSGAAPAPQLRETLARYGLAA 266
>gi|119715551|ref|YP_922516.1| glutamate racemase [Nocardioides sp. JS614]
gi|119536212|gb|ABL80829.1| glutamate racemase [Nocardioides sp. JS614]
Length = 282
Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats.
Identities = 53/256 (20%), Positives = 95/256 (37%), Gaps = 6/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG GGL V + + +P +YV D PYG +++ + L
Sbjct: 18 DAPIGIFDSGFGGLTVARSVIDQLPHESIVYVGDTARQPYGPKPIGEVREYALECLD-HL 76
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACN+A + + R + PA ++A A +++G I ++ T AT
Sbjct: 77 VERGVKALVIACNSASAAMLRDARERYDVPVVEVIYPATRRAVAASRTGRIGVICTRATA 136
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + VE DE+ +
Sbjct: 137 ESMAYDDAFAA-APHVRLVTQPCPRFVDFVEAGVTSG----DELISVAHEYLDPLISEGV 191
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYPL+ V + V + +++ A+ +L + + + ++
Sbjct: 192 DTLILGCTHYPLLTGVISLVMGDNVTLVSSAEECAKDVYKMLVQTDLIRPSGEPAYSFLT 251
Query: 253 SGKPDIAMRRLMQGFG 268
+G P + G
Sbjct: 252 TGAPGEFETIGRRFLG 267
>gi|184200646|ref|YP_001854853.1| glutamate racemase [Kocuria rhizophila DC2201]
gi|183580876|dbj|BAG29347.1| glutamate racemase [Kocuria rhizophila DC2201]
Length = 297
Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats.
Identities = 62/261 (23%), Positives = 105/261 (40%), Gaps = 11/261 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL V + + +P +YV D PYG ++ + + D L
Sbjct: 14 NSPIGVFDSGVGGLTVARSIIDQLPNEEILYVGDTANGPYGPLPIAQVRSNALRIMDD-L 72
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFP---SMAFLGAV-PAIKQAAAYTQSGLISILST 128
L VIACNTA + + R + S+ + PA+++A A T+SG + ++ T
Sbjct: 73 VDSGVKLLVIACNTASAAVLRDARERYTRGYSIPVTEVIQPAVRRAVATTRSGRVGVIGT 132
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ ++ + Q I V+ VE E+ + +
Sbjct: 133 EATIGSRAYNDTFAA-APQLEITSVACPAFVEYVERGVTSG----PELLSTAQEYLQPLK 187
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDD 247
+ D +VL CTHYPL+ V + V+ + +++ AR L +
Sbjct: 188 DAQVDTLVLGCTHYPLLTAVISYVMGESVNLVSSAEETARDVYRSLLDNGLERDPSLAPH 247
Query: 248 HALFLSGKPDIAMRRLMQGFG 268
H +G P + G
Sbjct: 248 HEFLATGDPASFEVLAQRFLG 268
>gi|328543188|ref|YP_004303297.1| glutamate racemase [polymorphum gilvum SL003B-26A1]
gi|326412934|gb|ADZ69997.1| Glutamate racemase [Polymorphum gilvum SL003B-26A1]
Length = 258
Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats.
Identities = 141/253 (55%), Positives = 186/253 (73%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSGIGGL VL++ R LMPE F+YVADD FPYG W++ L+ RL+ LF+++ D++
Sbjct: 2 LLFDSGIGGLTVLREARVLMPERSFVYVADDAAFPYGGWDEAPLRARLLALFAELFDRFD 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
PV+S++ACNTAFTL +LR+ FP F+G VPAIK AA T+SGL+S+L+TP T+RR Y
Sbjct: 62 PVVSIVACNTAFTLAGADLRAAFPDRTFVGTVPAIKPAAERTRSGLVSVLATPGTVRRAY 121
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI S+ SQCH+ LV S LA E Y G + ++ + EI CF+EK+G RTD++V
Sbjct: 122 TRELIQSFASQCHVRLVGSQNLAPMAEAYIRGEPLSDEAVGAEIADCFLEKDGARTDIVV 181
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
LACTHYP + +VFR+LSPWPVDWLD +++IAR+AR L+P + + R DHA+F SG P
Sbjct: 182 LACTHYPFLANVFRRLSPWPVDWLDPAEAIARQARRLVPALAHLKDRTQTDHAVFTSGSP 241
Query: 257 DIAMRRLMQGFGL 269
D RRLMQGFGL
Sbjct: 242 DFPTRRLMQGFGL 254
>gi|167039186|ref|YP_001662171.1| glutamate racemase [Thermoanaerobacter sp. X514]
gi|300913219|ref|ZP_07130536.1| glutamate racemase [Thermoanaerobacter sp. X561]
gi|307723767|ref|YP_003903518.1| glutamate racemase [Thermoanaerobacter sp. X513]
gi|229486283|sp|B0K3R0|MURI_THEPX RecName: Full=Glutamate racemase
gi|166853426|gb|ABY91835.1| glutamate racemase [Thermoanaerobacter sp. X514]
gi|300889904|gb|EFK85049.1| glutamate racemase [Thermoanaerobacter sp. X561]
gi|307580828|gb|ADN54227.1| glutamate racemase [Thermoanaerobacter sp. X513]
Length = 264
Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats.
Identities = 61/257 (23%), Positives = 108/257 (42%), Gaps = 8/257 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL VL+++ ++P +IY D PYG+ + +KK + + +
Sbjct: 4 RPIGIFDSGVGGLTVLKRLVEVLPGEDYIYFGDTKRVPYGDRSEEEIKKFAKQILNFMR- 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ + VIACNT +I +S + + F + AA YT + I +++T T+
Sbjct: 63 EQKVKAVVIACNTTCAVIN---KSEYDVVLFDVLKAGAESAALYTINKKIGVIATTRTVE 119
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I ++ + +E+ + C E + K D
Sbjct: 120 SKSYEKNIKIIDKNIEVYQKACPEFVPLIEKGLYN----SPIAYETASKCLKELKEKDID 175
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTHYPL+ V ++ V +D + +A + L + + ++ F+S
Sbjct: 176 TLVLGCTHYPLMASVIEEIMGENVKIVDPAIKLAYDVKDYLLKKDLLNPQIRGKAEFFVS 235
Query: 254 GKPDIAMRRLMQGFGLK 270
G D ++ G K
Sbjct: 236 GDKDNFIKTAEMLLGEK 252
>gi|1709187|sp|P52974|MURI_STAHA RecName: Full=Glutamate racemase
gi|520574|gb|AAA20474.1| glutamate racemase [Staphylococcus haemolyticus]
gi|1093233|prf||2103194B Glu racemase
Length = 266
Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats.
Identities = 57/257 (22%), Positives = 94/257 (36%), Gaps = 5/257 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ L +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIARCPYGPRPGDEVKQFTTQLANK- 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L ++ + VIACNTA + + L+ P P + A T++ + IL T T
Sbjct: 60 LMQFDIKMLVIACNTATAVALEHLQQMLPIPVIGVIEPGSRTAIMTTKNQNVLILGTEGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + I H+ VE+ + I +
Sbjct: 120 IKSEAYRHHIKHINPNVHVLWCGLPGFVPLVEQMRYDDPTITSIV---IHQTLKQWRNTD 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D I+L CTHYPL+ + + AR LL N H + +H
Sbjct: 177 ADTIILGCTHYPLLYKPINDYFGGEKKVISSGLETAREVSALLTFSNEHASYTQHPEHRF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
F +G ++Q
Sbjct: 237 FATGDTVHIKNIILQWL 253
>gi|251787784|ref|YP_003002505.1| glutamate racemase [Dickeya zeae Ech1591]
gi|247536405|gb|ACT05026.1| glutamate racemase [Dickeya zeae Ech1591]
Length = 290
Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats.
Identities = 82/264 (31%), Positives = 143/264 (54%), Gaps = 4/264 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ + ++L+FDSG+GGL V ++R L+P+ H+IY D+ FPYG + + +R++ +
Sbjct: 19 DLPARPTVLVFDSGVGGLSVYDEVRKLLPDLHYIYAFDNEAFPYGEKPEQFIIERVLSIV 78
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ ++ L +IACNTA T+ LR F +G VPA+K AA T++G++ +L+T
Sbjct: 79 DAVEKQHPLSLVIIACNTASTISLPALRERF-DFPVVGVVPAVKPAAKLTRNGVVGLLAT 137
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++R+YT LI + C I L+ S L E G + E+ ++K + K
Sbjct: 138 RATVQRSYTHELISRFAHDCQILLLGSAELVEFAEAKLQGESVSEEVLRKILRPWL--KL 195
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
+ D +VL CTH+PL+ +++ P +D+ +IARR L+ ++ + +
Sbjct: 196 AEPPDTVVLGCTHFPLLAEELQRVLPDGTRLVDSGSAIARRTAWLIEHLDNPKCSTEKNL 255
Query: 249 ALFLSGKPD-IAMRRLMQGFGLKS 271
A LS P A+ +++ +G S
Sbjct: 256 AYCLSITPKVAALWPVLRRYGFNS 279
>gi|171911183|ref|ZP_02926653.1| glutamate racemase [Verrucomicrobium spinosum DSM 4136]
Length = 271
Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats.
Identities = 54/256 (21%), Positives = 102/256 (39%), Gaps = 6/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +FDSG+GGL V++ + L+P IY+ D PYG+ ++K + + L
Sbjct: 7 NAPLGVFDSGVGGLTVVRALLDLLPNESIIYLGDTARVPYGSKSPDTIRKFSVED-TQFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
V+ACNTA +LR F P ++ A + I+ T T+
Sbjct: 66 LSKGVKAVVVACNTATAHALPQLRQMFRVPVVGVLEPGVEATLADPACQRVGIIGTAGTI 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + I+ ++ +L VE I K + K
Sbjct: 126 KSHAYQHELAMRRPDLQIYAEATPLLVPLVE----EDWIDHPATKMVLREYLKPMLDKGM 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALF 251
D +VL CTHYPL+ + +++ V +D++ + A + +L +T + ++
Sbjct: 182 DTLVLGCTHYPLLKPLLKRILNNKVRMVDSALTCAEHVKRMLAEQGLERTAKGKPKLEVY 241
Query: 252 LSGKPDIAMRRLMQGF 267
L+ + + +
Sbjct: 242 LTDLSEHSEELAKRFL 257
>gi|227833923|ref|YP_002835630.1| Glutamate racemase [Corynebacterium aurimucosum ATCC 700975]
gi|262184926|ref|ZP_06044347.1| glutamate racemase [Corynebacterium aurimucosum ATCC 700975]
gi|227454939|gb|ACP33692.1| Glutamate racemase [Corynebacterium aurimucosum ATCC 700975]
Length = 258
Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats.
Identities = 57/256 (22%), Positives = 100/256 (39%), Gaps = 7/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I IFDSG+GGL V + + +P+ IY+ D PYG +++ + + L
Sbjct: 6 SPIGIFDSGVGGLTVARTIIEQLPDESIIYIGDTAHAPYGPRPIAQVRELSTAIADE-LV 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ + VIACNTA + R + PA+++A A T++G I ++ T T+
Sbjct: 65 ERGCKMLVIACNTATAAFLHDARERYDIPVVEVIRPAVRRAIATTRNGKIGVIGTEGTIN 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+L V+ + VE + +I EG + D
Sbjct: 125 SGAYQDLFAV-NPNVECEAVACPDFVNFVERGITAGR----QILGVAEGYLAPLQSAGVD 179
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALFL 252
+VL CTHYPL+ V + V + +++ + +L + +
Sbjct: 180 TLVLGCTHYPLLTGVIQLAIGDNVTLVSSAEETTKDVLRILTNTDLLAPAGQAPTRSFEC 239
Query: 253 SGKPDIAMRRLMQGFG 268
+G R + G
Sbjct: 240 TGDHAAFERLATRFLG 255
>gi|315652855|ref|ZP_07905828.1| glutamate racemase [Eubacterium saburreum DSM 3986]
gi|315484886|gb|EFU75295.1| glutamate racemase [Eubacterium saburreum DSM 3986]
Length = 269
Score = 239 bits (609), Expect = 4e-61, Method: Composition-based stats.
Identities = 62/254 (24%), Positives = 100/254 (39%), Gaps = 5/254 (1%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
L I +FDSG+GGL V +++ MP +Y D PYG+ + K + +
Sbjct: 3 SLNLPIGVFDSGVGGLTVAREIISQMPNEGIVYFGDTARVPYGSKSKDTVIKYSRQIVN- 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L VIACNTA D L++ A T+ G I ++ T
Sbjct: 62 FLQTKNVKAIVIACNTASAFALDILKTEINIPIIGVIHAGAITATKTTKVGRIGVVGTNG 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ IH S+ + + +L VEE + ++ I E + +
Sbjct: 122 TISSGIYEKTIHEINSELEVIQKACPLLVPLVEEGLINDSVTDEI----ISRYVSELKSR 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D +VL CTHYPL+ + FR++ V ++ + A+ + LL R N H
Sbjct: 178 HIDSLVLGCTHYPLLYNTFRRIMGEGVSLVNPAYETAKELKSLLIRENLCAGDGEVFHEF 237
Query: 251 FLSGKPDIAMRRLM 264
++S +
Sbjct: 238 YVSDMAERFSDFAS 251
>gi|261819555|ref|YP_003257661.1| glutamate racemase [Pectobacterium wasabiae WPP163]
gi|261603568|gb|ACX86054.1| glutamate racemase [Pectobacterium wasabiae WPP163]
Length = 285
Score = 239 bits (609), Expect = 5e-61, Method: Composition-based stats.
Identities = 83/272 (30%), Positives = 143/272 (52%), Gaps = 4/272 (1%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
+ ++ P + ++L+FDSG+GGL V ++R L+P+ H+IY D+ FPYG +
Sbjct: 11 ISLEAIPSNLPSRPTVLVFDSGVGGLSVYDEIRQLLPDLHYIYAFDNEAFPYGEKSQQFI 70
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + S + ++Q L VIACNTA T+ LR F + +G VPA+K AA T++
Sbjct: 71 IERVVEIVSAVQQRHQLALVVIACNTASTISLPALRERF-TFPVVGVVPAVKPAAKLTRN 129
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T AT++R YT LI + + C I + S L E G I E++K +
Sbjct: 130 GVVGLLATRATVQRPYTHELIARFATDCQILSLGSSELVELAEAKLQGETISISELQKIL 189
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ + D +VL CTH+PL+ + P +D+ +IA+R L+ ++
Sbjct: 190 RPWL--RLPEPPDTVVLGCTHFPLLAEELKMALPEGTRLVDSGAAIAKRTAWLIANLDNP 247
Query: 241 QTRVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271
+ L+ P +A + ++Q +G S
Sbjct: 248 PLSTDKNLVYCLTITPKVATLWPILQRYGFDS 279
>gi|307822892|ref|ZP_07653122.1| glutamate racemase [Methylobacter tundripaludum SV96]
gi|307735667|gb|EFO06514.1| glutamate racemase [Methylobacter tundripaludum SV96]
Length = 270
Score = 238 bits (608), Expect = 5e-61, Method: Composition-based stats.
Identities = 74/259 (28%), Positives = 122/259 (47%), Gaps = 7/259 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
N I +FDSG+GGL VL ++R +P +YVAD PYG+ ++ R + + +
Sbjct: 1 MNAANPIGVFDSGVGGLSVLHEIRRALPGEDLLYVADSAHAPYGDKSQQFIENRSIAI-T 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L V+ACNTA LRS F SM + PA+K A+ ++SG+I +L+T
Sbjct: 60 EFLVSRNAKAIVVACNTATGAAITTLRSRF-SMPIIAMEPAVKPASENSKSGVIGVLATS 118
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
TL L Y + I + L +VE + D+ + +E +
Sbjct: 119 RTLASDNFVKLFARYGADVEILGQACPGLVEQVE----AGDLSGDKTRILLERYVLPLLE 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDH 248
+ D +VL CTHYP + + RQ++ V +D++ ++AR+ R L ++
Sbjct: 175 RGADTLVLGCTHYPFLAPLIRQIAGPGVTVIDSAAAVARQLRRRLEVVDLLADGARVGGE 234
Query: 249 ALFLSGKPDIAMRRLMQGF 267
+ + SG D A+ Q +
Sbjct: 235 SCWTSGVVDKALPLFAQLW 253
>gi|311743615|ref|ZP_07717421.1| glutamate racemase [Aeromicrobium marinum DSM 15272]
gi|311312745|gb|EFQ82656.1| glutamate racemase [Aeromicrobium marinum DSM 15272]
Length = 272
Score = 238 bits (608), Expect = 5e-61, Method: Composition-based stats.
Identities = 56/258 (21%), Positives = 98/258 (37%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG GGL V + + +P +Y+ D PYG +++ + L
Sbjct: 3 DAPIGIFDSGFGGLTVARAVLDQLPHESVLYLGDTARQPYGPLPISQVREYALDCLD-HL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACN+A + + R + VPA ++A T++G + ++ T +T
Sbjct: 62 VDHGVKALVIACNSASAAVLRDARERYAVPVVEVIVPATRRAVNATRNGRVGVICTQSTA 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + +H + VE G +E+ +
Sbjct: 122 TSRAYDDAFAA-NPSIELHTRACPRFVEFVEAGVTGG----EELITVAREYLAPLKEAGV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFDDHAL 250
D +VL CTHYPL+ V + V + +++ A+ LL R + + H
Sbjct: 177 DTLVLGCTHYPLLTGVVSYVMGDTVTLVSSAEETAKDVFALLAREDLARGPGASAPRHRF 236
Query: 251 FLSGKPDIAMRRLMQGFG 268
+G+P + G
Sbjct: 237 MTTGRPGEFGEIGRRFLG 254
>gi|229553813|ref|ZP_04442538.1| glutamate racemase with xanthosine/inosine pyrophosphatase of HAM1
family protein [Lactobacillus rhamnosus LMS2-1]
gi|229312836|gb|EEN78809.1| glutamate racemase with xanthosine/inosine pyrophosphatase of HAM1
family protein [Lactobacillus rhamnosus LMS2-1]
Length = 485
Score = 238 bits (608), Expect = 5e-61, Method: Composition-based stats.
Identities = 54/262 (20%), Positives = 99/262 (37%), Gaps = 6/262 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ I DSG+GGL V+++ +P + IY+ D PYG ++ + +
Sbjct: 1 MMNKQPIGFIDSGVGGLTVVKEALHQLPAENTIYLGDQARLPYGPRPAEQVQAFTWQMVN 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+L K+ + VIACNTA +++ P + A TQ+G I I++T
Sbjct: 61 FLLTKH-IKMLVIACNTATAAALPLIKARLKIPVIGVIKPGSRAALKATQTGHIGIIATE 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ + + + +++ S VE K+ +
Sbjct: 120 GTVKSGAYPKALRAKAPNIRLTSLAAPKFVSLVESNEA----HSPIAKRVVADTLQPLLH 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDH 248
+ D +VL CTHYP++ + + + V +D+ LL + H
Sbjct: 176 QDIDTLVLGCTHYPILRPIIQNVMGEDVTLIDSGAETVNDVSMLLDYFDLANDGSEVPTH 235
Query: 249 ALFLSGKPDIAMRRLMQGFGLK 270
+ +G P + LK
Sbjct: 236 TYYTTGAPSMFDELGESWLELK 257
>gi|148984333|ref|ZP_01817628.1| glutamate racemase [Streptococcus pneumoniae SP3-BS71]
gi|149003922|ref|ZP_01828736.1| glutamate racemase [Streptococcus pneumoniae SP14-BS69]
gi|147758062|gb|EDK65067.1| glutamate racemase [Streptococcus pneumoniae SP14-BS69]
gi|147923622|gb|EDK74735.1| glutamate racemase [Streptococcus pneumoniae SP3-BS71]
gi|301800660|emb|CBW33304.1| glutamate racemase [Streptococcus pneumoniae OXC141]
Length = 264
Score = 238 bits (608), Expect = 5e-61, Method: Composition-based stats.
Identities = 54/257 (21%), Positives = 102/257 (39%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P +Y+ D PYG + + L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIGEYTWQLVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNTA ++ +E+++ +P A +Q G I ++ TP T+
Sbjct: 63 TK-DVKMIVIACNTATAVVWEEIKAQLDIPVLGVILPGASAAIKSSQGGKIGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IH + ++ A VE A + + + + + +
Sbjct: 122 QSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLRPLVGK-----V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HAL 250
D ++L CTHYPL+ + + + V +D+ R LL ++ R H
Sbjct: 177 DSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINRGRDAGPLHHRF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
+ + + +
Sbjct: 237 YTTASSQSFAQIGEEWL 253
>gi|187250694|ref|YP_001875176.1| glutamate racemase [Elusimicrobium minutum Pei191]
gi|186970854|gb|ACC97839.1| Glutamate racemase [Elusimicrobium minutum Pei191]
Length = 264
Score = 238 bits (608), Expect = 5e-61, Method: Composition-based stats.
Identities = 51/252 (20%), Positives = 111/252 (44%), Gaps = 5/252 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I IFDSG+GGL +L+ ++ +P+ +FIY D PYG+ + + + +
Sbjct: 2 NNKPIGIFDSGLGGLTILRALQNDLPKENFIYFGDSARVPYGSKSKSTVLQYSLEIA-KF 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ V+ACNTA + L+ F A T++ ++++ T T
Sbjct: 61 LETQNIKFLVVACNTASAFALEALKKELSIPVFGVIEAGAYAAVTKTKNKKVAVIGTSGT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ +I+++ + + +++ + +E K E +
Sbjct: 121 VSSGSYKKVINAFDKKVKVFEIATPLFVPFIE----EGWADTRAAKLVAEEYLSAVKKSG 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
+D ++L CTHYP+I + +++ V+ +D++++I++ L + +T+ ++
Sbjct: 177 SDTLILGCTHYPIIKTLIKKIMGSKVNLIDSAETISKATAGFLKSKDMLKTKGSGSVKIY 236
Query: 252 LSGKPDIAMRRL 263
S PD+ ++
Sbjct: 237 ASDAPDLFAKKA 248
>gi|258651923|ref|YP_003201079.1| glutamate racemase [Nakamurella multipartita DSM 44233]
gi|258555148|gb|ACV78090.1| glutamate racemase [Nakamurella multipartita DSM 44233]
Length = 301
Score = 238 bits (608), Expect = 5e-61, Method: Composition-based stats.
Identities = 57/256 (22%), Positives = 97/256 (37%), Gaps = 8/256 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL V + + +P YV D PYG +++ + D L
Sbjct: 39 PIGIFDSGVGGLTVARAIIDQLPGERVRYVGDTANGPYGPLPIAEVRRHALA-VGDRLVD 97
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ VIACNTA + R + PA+++A A T++G + ++ T AT+
Sbjct: 98 SGVKILVIACNTASAACLADARERYDVPVVEVIRPAVRRAIAATRTGEVGVIGTSATIAS 157
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ +H V+ VE + ++ + + D
Sbjct: 158 GAYQDAFDV-NPGVRVHAVACPSFVDFVERGITSGR----QVIGLAQAYLGPLQRTNLDT 212
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HALFL 252
+VL CTHYPL+ + V + ++D A+ L ++ H
Sbjct: 213 LVLGCTHYPLLTGALSLVMGDQVTLVSSADETAKDVYRKLTELDLLAPGTRPSAPHEFLA 272
Query: 253 SGKPDIAMRRLMQGFG 268
+G P + + G
Sbjct: 273 TGDPAPFTKLGRRFLG 288
>gi|253997247|ref|YP_003049311.1| glutamate racemase [Methylotenera mobilis JLW8]
gi|253983926|gb|ACT48784.1| glutamate racemase [Methylotenera mobilis JLW8]
Length = 270
Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats.
Identities = 64/256 (25%), Positives = 119/256 (46%), Gaps = 7/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GG+ VLQ + L+P +YVAD PYGN ++ R + ++
Sbjct: 12 QRPIAVFDSGVGGISVLQHIHTLLPNEQLLYVADSKYAPYGNKSPAEIQARCTEITDFLI 71
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA D +R + ++ +G PA+K AA +++G+I +L+T TL
Sbjct: 72 ANH-AKAIVVACNTATAAAIDMMREKY-TLPIIGMEPAVKPAATASRNGIIGVLATTGTL 129
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ SY + + + L VE ++ D + ++ +
Sbjct: 130 KSAQFAGLLESYGRNVKVVTQACVGLVECVERGE----LQADATLQLVQKYCQPLLDEGA 185
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHALF 251
D IVL CTHYP + + Q+ V +D ++A++ + L ++ + +
Sbjct: 186 DTIVLGCTHYPFVRPLIEQVVGAQVSLIDTGAAVAKQLQKRLSALDLLTNNQQRGRVQFW 245
Query: 252 LSGKPDIAMRRLMQGF 267
+ + A + + +
Sbjct: 246 TNSAAENAKQVVENLW 261
>gi|223043787|ref|ZP_03613830.1| glutamate racemase [Staphylococcus capitis SK14]
gi|222442884|gb|EEE48986.1| glutamate racemase [Staphylococcus capitis SK14]
Length = 266
Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats.
Identities = 53/257 (20%), Positives = 94/257 (36%), Gaps = 5/257 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGDEVKQFTTEIAQK- 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L ++ + VIACNTA + + L++ P P + A T++ + +L T T
Sbjct: 60 LMEFDIKMLVIACNTATAVALEHLQTLLPIPVIGVIEPGARTAIMTTKNQNVLVLGTEGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ I +++ V+ VE+ + I +
Sbjct: 120 IKSEAYRTHIKKINPNVNVYGVACPGFVPLVEQMRYNDPTITSIV---IHQTLKQWRNSD 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D ++L CTHYPL+ + + AR LL N H + H
Sbjct: 177 ADTVILGCTHYPLLYKPIYDYFDGEKTVISSGLETAREVSALLTFSNEHASYTEHPKHRF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
F +G + +
Sbjct: 237 FATGDTTHIKNIIAEWL 253
>gi|195978747|ref|YP_002123991.1| glutamate racemase [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|195975452|gb|ACG62978.1| glutamate racemase MurI [Streptococcus equi subsp. zooepidemicus
MGCS10565]
Length = 292
Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats.
Identities = 52/257 (20%), Positives = 92/257 (35%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V+ ++ +P IY+ D PYG +++ L +L
Sbjct: 31 NRPIGFLDSGVGGLTVVSELMRQLPHEKIIYIGDSARAPYGPRPAEQIREYTWELVRFLL 90
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K+ + V ACNTA + +E++ +P A T G + ++ T T+
Sbjct: 91 TKH-VKMIVFACNTATAVAWEEVKEALDIPVLGVILPGASAAIKATSGGKVGVIGTSMTI 149
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + ++ VE + + + + + +
Sbjct: 150 SSGIYQEKIQLLAPTVQVTSLACPRFVPIVESNEISSSVAKKIVYETLAPLVGK-----I 204
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--RINTHQTRVFDDHAL 250
D +VL CTHYPL+ + + + V +D+ R LL IN + H
Sbjct: 205 DTLVLGCTHYPLLRTIIQNVLGPQVKLIDSGAECVRDISVLLNYFEINGSRDDEHRRHHF 264
Query: 251 FLSGKPDIAMRRLMQGF 267
+ + D
Sbjct: 265 YTTAGSDSFQAIASAWL 281
>gi|160944622|ref|ZP_02091849.1| hypothetical protein FAEPRAM212_02135 [Faecalibacterium prausnitzii
M21/2]
gi|158443806|gb|EDP20810.1| hypothetical protein FAEPRAM212_02135 [Faecalibacterium prausnitzii
M21/2]
gi|295104374|emb|CBL01918.1| glutamate racemase [Faecalibacterium prausnitzii SL3/3]
Length = 274
Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats.
Identities = 54/258 (20%), Positives = 92/258 (35%), Gaps = 3/258 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL ++++R +P IY D PYG+ + + + L
Sbjct: 3 NRPIGVFDSGLGGLTGVRELRKRLPHEDIIYFGDTGRVPYGSRSPETILQYARQDVA-FL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ AC T + + P A ++AA T++ I ++ T AT+
Sbjct: 62 LSKNVKCIMAACGTVSSTYPAAEAAQLPVPYLGVVDAAAREAAFVTRNRRIGVIGTAATI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE--DEIKKEIEGCFIEKEGK 190
R L+ V I + + VE K I E
Sbjct: 122 RSRSYEKLLRQLVPGVEITARACPLFVPLVEAGYVDHSEAGKQQITKLVIAQYLTEVREA 181
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D ++L CTHYPL+ + + V +D + + A +L +
Sbjct: 182 GVDTLILGCTHYPLLKSMIGEFMGPGVTLVDPAMTAAHHLERMLAERGLRASHESGQAHF 241
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S PD ++ G
Sbjct: 242 YVSDVPDSFVQTADLFLG 259
>gi|254422538|ref|ZP_05036256.1| glutamate racemase [Synechococcus sp. PCC 7335]
gi|196190027|gb|EDX84991.1| glutamate racemase [Synechococcus sp. PCC 7335]
Length = 307
Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats.
Identities = 64/274 (23%), Positives = 110/274 (40%), Gaps = 11/274 (4%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M I + + I +FDSG+GGL VL++MR +P IY D PYGN +
Sbjct: 1 MSIPALSSKLRSNFKIGVFDSGVGGLTVLREMRSHLPAESIIYFGDTARVPYGNRSKSEI 60
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+ + + + ++ + L V+ACNT+ L+ +E+RS FP +P + A +
Sbjct: 61 LRFVREIIAWMIRL-EVKLIVMACNTSSALVLEEVRSEFPIPILGIVLPGARGAVKTGK- 118
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I ++ST AT + + S + V +E K+
Sbjct: 119 -RIGVVSTEATAKSDAYLQAVQEIDSTIRVWQVGCPEFVPLIESGRSYDPYTLTVAKR-- 175
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
D +V CTHYP + VF+Q+ P + +D + ++ A L +
Sbjct: 176 --YLEPLIAAGIDTLVYGCTHYPHLAPVFKQILPTRIKLVDPAKHLSVAAAQELEILGLC 233
Query: 241 QTRVFDD----HALFLSGKPDIAMRRLMQGFGLK 270
+ + ++SG P + Q G +
Sbjct: 234 NSNAVETGATPTEFYVSGDPLKFAKVSQQWLGYR 267
>gi|332982127|ref|YP_004463568.1| glutamate racemase [Mahella australiensis 50-1 BON]
gi|332699805|gb|AEE96746.1| glutamate racemase [Mahella australiensis 50-1 BON]
Length = 268
Score = 238 bits (608), Expect = 6e-61, Method: Composition-based stats.
Identities = 47/256 (18%), Positives = 85/256 (33%), Gaps = 6/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL V++++ +P +Y D PYG + K + L
Sbjct: 3 NRPIGVFDSGVGGLTVVKEIMKQLPAEDIVYFGDTARVPYGTRSRDTVIKFTLQSV-RFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
V+ACNTA + + + F A T++ I ++ T T+
Sbjct: 62 MSQGIKAVVLACNTASAISLEVAQQQFDVPILGVIEGGAIAAVHATKNKRIGVIGTEGTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + VEE + E
Sbjct: 122 NSGAYERAIKLLDDSIETFAKPCPLFVPLVEEGLQ----DSEIAYMAAREYLSFFEDTGI 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALF 251
D +++ CTHYPL+ + R+ V ++ ++ A + L +++ + F
Sbjct: 178 DTLLMGCTHYPLMANTIRRAVGTGVKLINPAEKTALILKRTLLQMDILNDGAKHPRYRYF 237
Query: 252 LSGKPDIAMRRLMQGF 267
S + +
Sbjct: 238 ASDDGERFKKIGSSFL 253
>gi|229159921|ref|ZP_04287928.1| Glutamate racemase [Bacillus cereus R309803]
gi|228623660|gb|EEK80479.1| Glutamate racemase [Bacillus cereus R309803]
Length = 276
Score = 238 bits (607), Expect = 6e-61, Method: Composition-based stats.
Identities = 50/258 (19%), Positives = 101/258 (39%), Gaps = 5/258 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + + L
Sbjct: 7 NSVIGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFIFEMVE-FL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ V+ACNT +L+ P + A T+ G I ++ T T+
Sbjct: 66 KQFPLKALVVACNTGAAAALTDLQEALSIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTI 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ +H + +H + LA+ VE I + ++++ + +
Sbjct: 126 KSNMYEKALHELDTYLEVHSHACPTLATVVENQLEDIAY----VTQQVKQALLPLTKEDI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYPL+ ++ V + +++ A +L ++ H F
Sbjct: 182 DTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDKLNPKHRFFT 241
Query: 253 SGKPDIAMRRLMQGFGLK 270
+G + G +
Sbjct: 242 TGSVASFEHIAERWLGYQ 259
>gi|332522432|ref|ZP_08398684.1| glutamate racemase [Streptococcus porcinus str. Jelinkova 176]
gi|332313696|gb|EGJ26681.1| glutamate racemase [Streptococcus porcinus str. Jelinkova 176]
Length = 264
Score = 238 bits (607), Expect = 6e-61, Method: Composition-based stats.
Identities = 50/257 (19%), Positives = 94/257 (36%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P + +Y+ D PYG +K+ L + L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPYENIVYIGDSARAPYGPRPAEQIKEYTWELVN-FL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V ACNTA + +E++ +P A T +G + ++ TP T+
Sbjct: 62 MTKNVKMIVFACNTATAVAWEEVKEALDIPVLGVILPGSSAAIKSTTNGRVGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + ++ VE + + + + + +
Sbjct: 122 ISDIYRQKIQLLAPAVEVTSLACPKFVPIVESNEIQSSVAKKVVYETLAPLVGK-----V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA--L 250
D +VL CTHYPL+ + + + V +D+ R LL + R +
Sbjct: 177 DTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFEINSGRYQEKVRHYF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
+ + P+
Sbjct: 237 YTTASPETFQEIASVWL 253
>gi|73662954|ref|YP_301735.1| glutamate racemase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|123642328|sp|Q49WR7|MURI_STAS1 RecName: Full=Glutamate racemase
gi|72495469|dbj|BAE18790.1| glutamate racemase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 269
Score = 238 bits (607), Expect = 7e-61, Method: Composition-based stats.
Identities = 58/261 (22%), Positives = 103/261 (39%), Gaps = 5/261 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I + DSG+GGL V +++ +P Y+ D PYG+ E +++ L
Sbjct: 1 MEKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIERCPYGSREGSEVRQFTTELAQK- 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + + VIACNTA + + L++ P P + A T++ + IL T T
Sbjct: 60 LMTFDIKMLVIACNTATAVALNHLQNILPIPVIGVIEPGARTAIMTTKNNDVLILGTEGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + I + + ++ A VE+ I I I
Sbjct: 120 IKSEAYRHHIKAINPNVEVTGIACPSFAPMVEQMRYKDPIITSII---IHQNLKHWRNSN 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D ++L CTHYPL+ + + AR LL N H + H
Sbjct: 177 ADTVILGCTHYPLLYQPINDYFGGEKTVISSGLETAREVSALLTFSNEHAGYQRQPKHRF 236
Query: 251 FLSGKPDIAMRRLMQGFGLKS 271
F++G+ + R + + + +
Sbjct: 237 FVTGETEYIERIITEWLNISA 257
>gi|159900727|ref|YP_001546974.1| glutamate racemase [Herpetosiphon aurantiacus ATCC 23779]
gi|229486239|sp|A9AXC6|MURI_HERA2 RecName: Full=Glutamate racemase
gi|159893766|gb|ABX06846.1| glutamate racemase [Herpetosiphon aurantiacus ATCC 23779]
Length = 254
Score = 238 bits (607), Expect = 7e-61, Method: Composition-based stats.
Identities = 69/251 (27%), Positives = 108/251 (43%), Gaps = 7/251 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL L+ +R L+P IY AD PYG + + IL
Sbjct: 3 DQPIGMFDSGVGGLSTLRDLRALLPHEDIIYYADTGNCPYGGRSHEEIVALS-ERITYIL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L V+ACNTA D LR F S++F+G P IK A A T++G++ +++T AT+
Sbjct: 62 LERGVKLIVVACNTATLHAVDYLREHF-SISFVGMEPGIKPAIAQTKTGVVGVMATQATV 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
LI Y + + L +E ++ + + +
Sbjct: 121 AGERFQRLIARYAGDVQVVPQACPGLVELIEAGE----LQSETTRDAVARYVAPLLKAGA 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALF 251
D IVL CTHYP + + ++ V LD ++AR+ + LL + +
Sbjct: 177 DTIVLGCTHYPFLRSLIADVAGPNVALLDTGAAVARQTQRLLAAADLLNPQTSQGSIEWL 236
Query: 252 LSGKPDIAMRR 262
SG P +
Sbjct: 237 TSGDPAHFAKI 247
>gi|295092631|emb|CBK78738.1| glutamate racemase [Clostridium cf. saccharolyticum K10]
Length = 271
Score = 238 bits (607), Expect = 7e-61, Method: Composition-based stats.
Identities = 55/261 (21%), Positives = 91/261 (34%), Gaps = 8/261 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I +FDSG+GGL V +++ MPE +Y D PYG + + +
Sbjct: 1 MDRNAPIGVFDSGVGGLTVAREIMRQMPEEKLVYFGDTARVPYGTKSQETVIRYSRQII- 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L + VIACNTA + + K A T++ I I+ T
Sbjct: 60 RFLRTKEVKAIVIACNTATACALETVEKDLDIPIIGVIHAGAKAAVEATKNRKIGIIGTE 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+R + L+ + + VEE + ++ +
Sbjct: 120 ATIRSGVYTELMKQMNPAIEVTGKPCPLFVPLVEEGLLHDSVTDEI----ASRYLASLKE 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT---HQTRVFD 246
K D +V+ CTHYPL+ +L V ++ + AR + LL +
Sbjct: 176 KYIDTLVMGCTHYPLLRSTLARLMGEEVTLINPAYETARELKSLLGEKELTCIPGEAGGE 235
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ F+S +
Sbjct: 236 KYQFFVSDMAERFKSFATAIL 256
>gi|225867935|ref|YP_002743883.1| glutamate racemase [Streptococcus equi subsp. zooepidemicus]
gi|225871149|ref|YP_002747096.1| glutamate racemase [Streptococcus equi subsp. equi 4047]
gi|254766125|sp|C0M7R0|MURI_STRE4 RecName: Full=Glutamate racemase
gi|259509918|sp|C0MGG5|MURI_STRS7 RecName: Full=Glutamate racemase
gi|225700553|emb|CAW95041.1| glutamate racemase [Streptococcus equi subsp. equi 4047]
gi|225701211|emb|CAW98144.1| glutamate racemase [Streptococcus equi subsp. zooepidemicus]
Length = 264
Score = 238 bits (607), Expect = 7e-61, Method: Composition-based stats.
Identities = 52/257 (20%), Positives = 92/257 (35%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V+ ++ +P IY+ D PYG +++ L +L
Sbjct: 3 NRPIGFLDSGVGGLTVVSELMRQLPHEKIIYIGDSARAPYGPRPAEQIREYTWELVRFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K+ + V ACNTA + +E++ +P A T G + ++ T T+
Sbjct: 63 TKH-VKMIVFACNTATAVAWEEVKEALDIPVLGVILPGASAAIKATSGGKVGVIGTSMTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + ++ VE + + + + + +
Sbjct: 122 SSGIYQEKIQLLAPTVQVTSLACPRFVPIVESNEISSSVAKKIVYETLAPLVGK-----I 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--RINTHQTRVFDDHAL 250
D +VL CTHYPL+ + + + V +D+ R LL IN + H
Sbjct: 177 DTLVLGCTHYPLLRTIIQNVLGPQVKLIDSGAECVRDISVLLNYFEINGSRDDEHRRHHF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
+ + D
Sbjct: 237 YTTAGSDSFQAIASAWL 253
>gi|154250720|ref|YP_001411544.1| glutamate racemase [Parvibaculum lavamentivorans DS-1]
gi|154154670|gb|ABS61887.1| glutamate racemase [Parvibaculum lavamentivorans DS-1]
Length = 276
Score = 238 bits (607), Expect = 7e-61, Method: Composition-based stats.
Identities = 61/260 (23%), Positives = 109/260 (41%), Gaps = 5/260 (1%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K + +I +FDSGIGG+ VL+ +R +P +Y+ D PYG + +
Sbjct: 4 KSERAIGVFDSGIGGITVLKALRAALPHEDLVYLGDTARLPYGTKSPETVTAYATQ-ATK 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
L ++ + VIACNTA + L + +G + P K A T+SG I ++ T
Sbjct: 63 HLMEHGVKMVVIACNTASAVAIGPLTEALKPLPVIGVIEPGAKAGVAATKSGRIGVIGTE 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+R IH+ + + + + EE ++ E K+ + F +
Sbjct: 123 ATVRGGAYMRAIHALDPKAQVTQAPCGLFVTLAEEGWTSGEVAEAAAKRYLAPLFKGRNA 182
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDH 248
D +VL CTH+P++ + +++ V +D++ + A+ L + R
Sbjct: 183 P--DTLVLGCTHFPVLARIIKKVVGKNVKLVDSAATTAKAVEAALAEQGLASRRRGKGKT 240
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+ + R FG
Sbjct: 241 RFLATDSAERFARVGGIFFG 260
>gi|297625966|ref|YP_003687729.1| glutamate racemase [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296921731|emb|CBL56289.1| Glutamate racemase [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 272
Score = 238 bits (607), Expect = 7e-61, Method: Composition-based stats.
Identities = 58/252 (23%), Positives = 96/252 (38%), Gaps = 8/252 (3%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ + I IFDSG GGL V + + L+P IY+ D PYG +++ ++
Sbjct: 2 NRDVNAPIGIFDSGFGGLTVARAVVDLLPREDIIYLGDTARAPYGPRPIAEVREFVLQAL 61
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
L VIACNT + + R + +PA ++AA T++G + ++ T
Sbjct: 62 D-SLVARGVKSLVIACNTGSSAALHDARERYDLPITEVVLPAARKAARITRNGRVGVICT 120
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T ++ + S + VE E+ + +
Sbjct: 121 RGTAISRSYNDALA--ASPVKLFTQVCPRFVEFVEAGIT----TGPEVLQLAREYLAPLQ 174
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DD 247
D ++L CTHYPL+ V + V + +SD AR L R + +T
Sbjct: 175 ADDIDTLILGCTHYPLLSGVISYVMGEDVTLVSSSDECARAVFAELTRDDLLRTEPHEPQ 234
Query: 248 HALFLSGKPDIA 259
F +G P
Sbjct: 235 REFFTTGDPAQF 246
>gi|86357929|ref|YP_469821.1| glutamate racemase [Rhizobium etli CFN 42]
gi|86282031|gb|ABC91094.1| glutamate racemase (required for biosynthesis of D-glutamate and
peptidoglycan) protein [Rhizobium etli CFN 42]
Length = 266
Score = 238 bits (607), Expect = 7e-61, Method: Composition-based stats.
Identities = 141/258 (54%), Positives = 188/258 (72%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+L+FDSGIGGL VL++ R LMPE F+YVADD GFPYG WE+ ALK+R++ LF +L
Sbjct: 9 KPVLVFDSGIGGLTVLREARVLMPERGFVYVADDAGFPYGGWEEQALKERIIGLFGKLLQ 68
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
Y P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++
Sbjct: 69 DYHPEVCIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 128
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI S+ QCH+ LV S LA E Y G + ++ + EI+ CF+EKEG +TD
Sbjct: 129 RAYTRDLIQSFAQQCHVRLVGSENLARMAEAYIRGDAVSDEAVLAEIDQCFVEKEGYKTD 188
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++VLACTHYP + ++FR+L+PWPVDWLD +++IARRAR L+P + D A+F S
Sbjct: 189 IVVLACTHYPFMANLFRRLAPWPVDWLDPAEAIARRARTLVPLVADAVHPDNFDFAVFTS 248
Query: 254 GKPDIAMRRLMQGFGLKS 271
G PD A RRLMQGFGL++
Sbjct: 249 GNPDFATRRLMQGFGLRA 266
>gi|199598101|ref|ZP_03211524.1| Glutamate racemase with xanthosine/inosine pyrophosphatase of HAM1
family protein [Lactobacillus rhamnosus HN001]
gi|258507777|ref|YP_003170528.1| glutamate racemase [Lactobacillus rhamnosus GG]
gi|199591027|gb|EDY99110.1| Glutamate racemase with xanthosine/inosine pyrophosphatase of HAM1
family protein [Lactobacillus rhamnosus HN001]
gi|257147704|emb|CAR86677.1| Glutamate racemase [Lactobacillus rhamnosus GG]
gi|259649124|dbj|BAI41286.1| glutamate racemase [Lactobacillus rhamnosus GG]
Length = 484
Score = 238 bits (607), Expect = 8e-61, Method: Composition-based stats.
Identities = 54/260 (20%), Positives = 99/260 (38%), Gaps = 6/260 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I DSG+GGL V+++ +P + IY+ D PYG ++ + + +
Sbjct: 2 NKQPIGFIDSGVGGLTVVKEALHQLPAENTIYLGDQARLPYGPRPAEQVQAFTWQMVNFL 61
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K+ + VIACNTA +++ P + A TQ+G I I++T T
Sbjct: 62 LTKH-IKMLVIACNTATAAALPLIKARLKIPVIGVIKPGSRAALKATQTGHIGIIATEGT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + + + +++ S VE K+ + +
Sbjct: 121 VKSGAYPKALRAKAPDIRLTSLAAPKFVSLVESNEA----HSPIAKRVVADTLQPLLHQD 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHAL 250
D +VL CTHYP++ + + + V +D+ LL + H
Sbjct: 177 IDTLVLGCTHYPILRPIIQNVMGEDVTLIDSGAETVNDVSMLLDYFDLANDGSEVPTHTY 236
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
+ +G P + LK
Sbjct: 237 YTTGAPSMFDELGESWLELK 256
>gi|255324315|ref|ZP_05365436.1| glutamate racemase [Corynebacterium tuberculostearicum SK141]
gi|255298645|gb|EET77941.1| glutamate racemase [Corynebacterium tuberculostearicum SK141]
Length = 259
Score = 238 bits (607), Expect = 8e-61, Method: Composition-based stats.
Identities = 57/256 (22%), Positives = 99/256 (38%), Gaps = 7/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I IFDSG+GGL V + + +P IY D PYG ++ + L
Sbjct: 6 SPIGIFDSGVGGLTVARAVMEQLPHESVIYTGDTAHSPYGPRPISEVRAFSQDVADR-LV 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ + VIACNTA + R + PA+++A + T++G I ++ T T++
Sbjct: 65 ERGCKMLVIACNTATAAFLHDARERYDIPIVEVIRPAVRRAMSTTRNGKIGVIGTEGTIK 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+L + + VE + +I EG + + D
Sbjct: 125 SGAYQDLFAL-NPKVQAFATACPDFVPFVERGITAGR----QILGVAEGYLAPLQEQGVD 179
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALFL 252
+VL CTHYPL+ + + V + +S+ + +L + H
Sbjct: 180 TLVLGCTHYPLLTGIIQLAMGDNVSLVTSSEETTKDVMRILTETDMLAPAENQPVHTFES 239
Query: 253 SGKPDIAMRRLMQGFG 268
+G P+ R + G
Sbjct: 240 TGDPEAFARLATRFLG 255
>gi|113474067|ref|YP_720128.1| glutamate racemase [Trichodesmium erythraeum IMS101]
gi|122965316|sp|Q11A19|MURI_TRIEI RecName: Full=Glutamate racemase
gi|110165115|gb|ABG49655.1| glutamate racemase [Trichodesmium erythraeum IMS101]
Length = 270
Score = 238 bits (607), Expect = 8e-61, Method: Composition-based stats.
Identities = 61/261 (23%), Positives = 108/261 (41%), Gaps = 7/261 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ Q I IFDSGIGGL VL+++ +P+ +Y AD PYG + + + + +
Sbjct: 4 ETRQKRIGIFDSGIGGLTVLRELYRQLPKESILYFADTARLPYGTRTTEEILQFVDEIIT 63
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L K + ++ACNT+ L ++++S F VP A + I +++TP
Sbjct: 64 -WLVKSGVKMVLMACNTSSALALEKVKSKFDVPILGLIVPGANTAVKQGK--RIGVIATP 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT I + + V +E+ ++ + + E +
Sbjct: 121 ATAASNAYRYAILEANASVQVWQVGCPYFVPLIEQN----QLHDPYTYQIAEEYLMPLIQ 176
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
++ D +V CTHYP + + R L P V ++D + S+ + L +N +
Sbjct: 177 QQIDTLVYGCTHYPYLEPILRSLLPKSVIFVDPAVSLVKVVARELKIMNLENDKTPKPTK 236
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
+S P +Q G K
Sbjct: 237 FVVSSSPQKFADLSLQLLGYK 257
>gi|283770211|ref|ZP_06343103.1| glutamate racemase [Staphylococcus aureus subsp. aureus H19]
gi|283460358|gb|EFC07448.1| glutamate racemase [Staphylococcus aureus subsp. aureus H19]
Length = 266
Score = 237 bits (606), Expect = 8e-61, Method: Composition-based stats.
Identities = 56/260 (21%), Positives = 95/260 (36%), Gaps = 5/260 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARK- 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L ++ + VIACNTA + + L+ T P + A T++ + +L T T
Sbjct: 60 LMEFDIKMLVIACNTATAVALEYLQKTLSIPVIGVIEPGARTAIMTTRNQNVLVLGTEGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ I +H V+ VE+ + I
Sbjct: 120 IKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYSDPTITSIV---IHQTLKRWRNSE 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
+D ++L CTHYPL+ + + AR LL N H + DH
Sbjct: 177 SDTVILGCTHYPLLYKPIYDYFDGKKTVISSGLETAREVSALLTFSNEHASYTEHPDHRF 236
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
F +G + + L
Sbjct: 237 FATGDTTHITNIIKEWLNLS 256
>gi|319784057|ref|YP_004143533.1| glutamate racemase [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317169945|gb|ADV13483.1| glutamate racemase [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 266
Score = 237 bits (606), Expect = 8e-61, Method: Composition-based stats.
Identities = 130/261 (49%), Positives = 175/261 (67%), Gaps = 4/261 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ IL+FDSGIGGL VL++ R LMP+ FIYVADD FPYG WE+ AL+ ++ LF +L
Sbjct: 3 ERPILMFDSGIGGLTVLREARVLMPDRRFIYVADDAAFPYGAWEEPALRVHILELFGKLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+++ P +SVIACNTA TL+ D LR FP F+G VPAIK AA T+SGL+S+L+TP T+
Sbjct: 63 ERFAPAISVIACNTASTLVIDALRDRFPEHPFVGMVPAIKPAAERTRSGLVSVLATPGTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT +LI + +CH+ LV S LA E Y + E+ ++ EI CF+E++ RT
Sbjct: 123 KRQYTRDLISKWAQKCHVRLVGSDRLAGLAEIYMREGFVDEEAVRAEITPCFVERDALRT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR----VFDDH 248
D++VLACTHYP + + R+ +PWPVDWLD +++IARRA LL I+ D
Sbjct: 183 DIVVLACTHYPFLANRMRKTAPWPVDWLDPAEAIARRALSLLADIDPSGRGEMLPEGPDL 242
Query: 249 ALFLSGKPDIAMRRLMQGFGL 269
A+F S + D RRLMQGFGL
Sbjct: 243 AVFTSKRADFPTRRLMQGFGL 263
>gi|295108801|emb|CBL22754.1| glutamate racemase [Ruminococcus obeum A2-162]
Length = 272
Score = 237 bits (606), Expect = 9e-61, Method: Composition-based stats.
Identities = 46/254 (18%), Positives = 96/254 (37%), Gaps = 8/254 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +FDSG+GGL V +++ +P +Y D PYG+ + + + L
Sbjct: 5 NAPVGVFDSGVGGLTVAREIMRNLPSEKIVYFGDTARVPYGSKSKDTVIRYSSQIV-HFL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA + ++ + AA T++ + ++ T T+
Sbjct: 64 REQNVKAIVIACNTASAFALEAVQDKLDIPVLGVIEAGARVAAEETKNKRVGVIGTVGTV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + + + + VE + + + E + ++
Sbjct: 124 GSGIHESYLKRLDPEITVIGKACPLFVPLVE----EGWLHDPVTVEVASRYLQELKDEQV 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD---DHA 249
D ++L CTHYPLI +++ V ++ + A + LL +++ T +
Sbjct: 180 DTLILGCTHYPLIRSTIQEVMGEKVRLVNPAYETALELKSLLTKMDLLSTGEQQAEFPYR 239
Query: 250 LFLSGKPDIAMRRL 263
++S D
Sbjct: 240 FYVSDLADEFKEFA 253
>gi|147677122|ref|YP_001211337.1| glutamate racemase [Pelotomaculum thermopropionicum SI]
gi|146273219|dbj|BAF58968.1| glutamate racemase [Pelotomaculum thermopropionicum SI]
Length = 266
Score = 237 bits (606), Expect = 9e-61, Method: Composition-based stats.
Identities = 53/260 (20%), Positives = 95/260 (36%), Gaps = 6/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ +I +FDSGIGGL V ++ +P IY D PYG+ L + +
Sbjct: 1 MRKTGAIGLFDSGIGGLTVAVEVYRQLPAESTIYFGDTAHVPYGSRNPGELYRFASRIVD 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L+ + ACNT+ +L L+ P + A T + I +++T
Sbjct: 61 -FLEGEGAKYIIFACNTSSSLSLPILQERKAVPMIGLIKPGVAAALQKTVNRRIGVIATE 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT++ + + ++ L VE G + +++ +
Sbjct: 120 ATVKSGAYERELKRQDENVQVFCQAASRLVPLVEAGETGTPAAAEAVRE----YLFPLKE 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDH 248
D ++L CTHYP + + V +D + + A L R+ +H
Sbjct: 176 AGIDTLILGCTHYPFLKPLIAGEMGPGVQLVDPAAATVEEAGKELQRLGLAAGGPAVPEH 235
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+SG P + + G
Sbjct: 236 RFVVSGDPAAFQKAARRFLG 255
>gi|258538968|ref|YP_003173467.1| glutamate racemase [Lactobacillus rhamnosus Lc 705]
gi|257150644|emb|CAR89616.1| Glutamate racemase [Lactobacillus rhamnosus Lc 705]
Length = 484
Score = 237 bits (606), Expect = 9e-61, Method: Composition-based stats.
Identities = 54/260 (20%), Positives = 99/260 (38%), Gaps = 6/260 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I DSG+GGL V+++ +P + IY+ D PYG ++ + + +
Sbjct: 2 NKQPIGFIDSGVGGLTVVKEALHQLPAENTIYLGDQARLPYGPRPAEQVQAFTWQMVNFL 61
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K+ + VIACNTA +++ P + A TQ+G I I++T T
Sbjct: 62 LTKH-IKMLVIACNTATAAALPLIKARLKIPVIGVIKPGSRAALKATQTGHIGIIATEGT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + + + +++ S VE K+ + +
Sbjct: 121 VKSGAYPKALRAKAPNIRLTSLAAPKFVSLVESNEA----HSPIAKRVVADTLQPLLHQD 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHAL 250
D +VL CTHYP++ + + + V +D+ LL + H
Sbjct: 177 IDTLVLGCTHYPILRPIIQNVMGEDVTLIDSGAETVNDVSMLLDYFDLANDGSEVPTHTY 236
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
+ +G P + LK
Sbjct: 237 YTTGAPSMFDELGESWLELK 256
>gi|120405243|ref|YP_955072.1| glutamate racemase [Mycobacterium vanbaalenii PYR-1]
gi|119958061|gb|ABM15066.1| glutamate racemase [Mycobacterium vanbaalenii PYR-1]
Length = 281
Score = 237 bits (606), Expect = 9e-61, Method: Composition-based stats.
Identities = 56/260 (21%), Positives = 106/260 (40%), Gaps = 12/260 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL V + + +P+ IY+ D PYG ++ + + D L
Sbjct: 11 PIGIFDSGVGGLTVARAVIDQLPDEDIIYIGDTGNGPYGPLTIPEIRAHALAIGDD-LAG 69
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
VIACN+A + + R + + + + PA+++A A T++G I ++ T AT+
Sbjct: 70 RGIKALVIACNSASSACLRDARERYAPIPVVEVILPAVRRAVATTRNGRIGVIGTAATIA 129
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + + V+ VE + ++ EG + D
Sbjct: 130 SGAYQDTFAA-ARDIEVFGVACPRFVDFVERGVTSGR----QVLGLAEGYLEPLQRAEVD 184
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-----H 248
+VL CTHYP++ + + + V + +++ A+ +L + + D
Sbjct: 185 TLVLGCTHYPMLSGLIQLVMGDHVTLVSSAEETAKDLLRVLTKRELLKPHPGDPAVRAHR 244
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+G P+ + G
Sbjct: 245 QFEATGDPEAFTALAARFLG 264
>gi|325286852|ref|YP_004262642.1| Glutamate racemase [Cellulophaga lytica DSM 7489]
gi|324322306|gb|ADY29771.1| Glutamate racemase [Cellulophaga lytica DSM 7489]
Length = 263
Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats.
Identities = 65/244 (26%), Positives = 118/244 (48%), Gaps = 6/244 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
N I +FDSG+GG + +++ L+P + IY+AD PYG + + + +++L
Sbjct: 3 NNPIGVFDSGVGGTSIWKEIHKLLPLENTIYLADSANAPYGKKSPEDILRLSIKN-TELL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + V+ACNTA T LR T+ +++F+G PAIK A + S + +L+T TL
Sbjct: 62 LQHNCKIIVVACNTATTNAITYLRETYTNVSFIGIEPAIKPAVLQSNSKTVGVLATKGTL 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + ++ I L +E E K ++ +
Sbjct: 122 SSSLFHSTVKNHAEGIKIIEKEGEGLVPLIESGKA----TSVEAKDLLKTFLEPMLEQNI 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251
D +VL CTHYP ++ V ++L P V+ +D+ +++AR+ + +L R N V H +
Sbjct: 178 DYLVLGCTHYPYLIPVLKELLPAHVNIIDSGEAVARQTKAILERENLLNRGNVASSHKFY 237
Query: 252 LSGK 255
+
Sbjct: 238 TNAD 241
>gi|311741210|ref|ZP_07715034.1| glutamate racemase [Corynebacterium pseudogenitalium ATCC 33035]
gi|311303380|gb|EFQ79459.1| glutamate racemase [Corynebacterium pseudogenitalium ATCC 33035]
Length = 259
Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats.
Identities = 58/256 (22%), Positives = 100/256 (39%), Gaps = 7/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I IFDSG+GGL V + + +P IY D PYG ++ +D L
Sbjct: 6 SPIGIFDSGVGGLTVARAVMEQLPHESVIYTGDTAHSPYGPRPISEVRAFS-QGVADRLV 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ + VIACNTA + R + PA+++A + T++G I ++ T T++
Sbjct: 65 ERGCKMLVIACNTATAAFLHDARERYDIPIVEVIRPAVRRAMSTTRNGKIGVIGTEGTIK 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+L + + VE + +I EG + + D
Sbjct: 125 SGAYQDLFAL-NPKVQAFATACPDFVPFVERGITAGR----QILGVAEGYLAPLQAQGVD 179
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALFL 252
+VL CTHYPL+ + + V + +S+ + +L + H
Sbjct: 180 TLVLGCTHYPLLTGIIQLAMGDNVSLVTSSEETTKDVMRILTETDMLAPAENQPVHTFES 239
Query: 253 SGKPDIAMRRLMQGFG 268
+G P+ R + G
Sbjct: 240 TGDPEAFARLAARFLG 255
>gi|283796789|ref|ZP_06345942.1| glutamate racemase [Clostridium sp. M62/1]
gi|291075679|gb|EFE13043.1| glutamate racemase [Clostridium sp. M62/1]
gi|295115201|emb|CBL36048.1| glutamate racemase [butyrate-producing bacterium SM4/1]
Length = 271
Score = 237 bits (606), Expect = 1e-60, Method: Composition-based stats.
Identities = 54/261 (20%), Positives = 91/261 (34%), Gaps = 8/261 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I +FDSG+GGL V +++ MPE +Y D PYG + + +
Sbjct: 1 MDRNAPIGVFDSGVGGLTVAREIMRQMPEEKLVYFGDTARVPYGTKSQETVIRYSRQII- 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L + VIACNTA + + + A T++ I I+ T
Sbjct: 60 RFLRTKEVKAIVIACNTATACALETVEKDLDIPIIGVIHAGARAAVEATKNRKIGIIGTE 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+R + L+ + + VEE + ++ +
Sbjct: 120 ATIRSGVYTELMKQMNPAIEVTGKPCPLFVPLVEEGLLHDSVTDEI----ASRYLASLKE 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT---HQTRVFD 246
K D +V+ CTHYPL+ +L V ++ + AR + LL +
Sbjct: 176 KYIDTLVMGCTHYPLLRSTLARLMGEEVTLINPAYETARELKSLLGEKELTCIPGEAGGE 235
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ F+S +
Sbjct: 236 KYQFFVSDMAERFKSFATAIL 256
>gi|323483118|ref|ZP_08088510.1| hypothetical protein HMPREF9474_00259 [Clostridium symbiosum
WAL-14163]
gi|323691441|ref|ZP_08105713.1| glutamate racemase [Clostridium symbiosum WAL-14673]
gi|323403538|gb|EGA95844.1| hypothetical protein HMPREF9474_00259 [Clostridium symbiosum
WAL-14163]
gi|323504487|gb|EGB20277.1| glutamate racemase [Clostridium symbiosum WAL-14673]
Length = 275
Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats.
Identities = 56/261 (21%), Positives = 96/261 (36%), Gaps = 12/261 (4%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I +FDSG+GGL V++++ MP+ +Y D PYGN + + +
Sbjct: 1 MDRNAPIGVFDSGVGGLTVMREIMRQMPDERIVYFGDTARVPYGNKSKETVIRYSQQII- 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L + VIACNTA + + + + A T++G I I+ T
Sbjct: 60 RFLQTKEVKAIVIACNTASACALEAVEKSLDIPIIGVISAGSRAAVEATRNGKIGIIGTE 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+R S + + + VEE + ++ +G
Sbjct: 120 ATIRSGVYSEEMKQLRGDIEVTGKPCPLFVPLVEEGLLHDSVTDEI----ASRYLACLKG 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
K D +V+ CTHYPL+ F++L V ++ + A + LL + +
Sbjct: 176 KYIDTLVMGCTHYPLLRSTFKRLMGDDVTLVNPAYETAVELKGLLKEKGMTRGAKSEGVE 235
Query: 250 -------LFLSGKPDIAMRRL 263
F+S +
Sbjct: 236 DTREQYQFFVSDLAEKFTNFA 256
>gi|218663166|ref|ZP_03519096.1| glutamate racemase [Rhizobium etli IE4771]
Length = 450
Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats.
Identities = 141/258 (54%), Positives = 190/258 (73%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+L+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK+R++ LF +L+
Sbjct: 193 KPVLVFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEQALKERIIGLFGKLLN 252
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
Y P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++
Sbjct: 253 DYDPEVCIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 312
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI S+ QCH+ LV S LA E Y G + +D + EI+ CF+EK+G++TD
Sbjct: 313 RAYTRDLIQSFAQQCHVRLVGSENLARMAEAYIRGDAVSDDAVLAEIDQCFVEKDGQKTD 372
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++VLACTHYP + ++FR+++PWPVDWLD +++IARRAR L+P + D A+F S
Sbjct: 373 IVVLACTHYPFMANLFRRIAPWPVDWLDPAEAIARRARTLVPLVADAVHPDNFDFAMFTS 432
Query: 254 GKPDIAMRRLMQGFGLKS 271
G+ D A RRLMQGFGLK+
Sbjct: 433 GQQDFATRRLMQGFGLKA 450
>gi|218291114|ref|ZP_03495129.1| glutamate racemase [Alicyclobacillus acidocaldarius LAA1]
gi|218238925|gb|EED06133.1| glutamate racemase [Alicyclobacillus acidocaldarius LAA1]
Length = 281
Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats.
Identities = 59/256 (23%), Positives = 106/256 (41%), Gaps = 6/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSGIGGL V M+ +P +Y D PYG+ + +++ + + L+
Sbjct: 6 RPIGVFDSGIGGLTVFHAMKRRLPHESMVYFGDRARCPYGDRDPQEVERFALEI-GRYLE 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
L V+ACNTA + L+ P QA +++G I ++ T T+
Sbjct: 65 CLGIKLLVVACNTATAVALPRLKEELGIEVVGVIEPGASQAIEASETGRIGVIGTSVTVS 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
++ + + + V+ + VE+ ++ D ++ + +R D
Sbjct: 125 SHAYADALRALRPDVSVIEVACPLFVPLVEQ----GHVEGDAVEAVVHESLQPLLQERID 180
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALFL 252
+VL CTHYPL++ V R++ + + ++D+ A+R LL D
Sbjct: 181 TLVLGCTHYPLLMPVIRRVLGPAIRVISSADATAQRVARLLAERGLEAPDDHVPDACFLT 240
Query: 253 SGKPDIAMRRLMQGFG 268
+G L FG
Sbjct: 241 TGDTTSLRMALATWFG 256
>gi|55820352|ref|YP_138794.1| glutamate racemase [Streptococcus thermophilus LMG 18311]
gi|81561031|sp|Q5M627|MURI_STRT2 RecName: Full=Glutamate racemase
gi|55736337|gb|AAV59979.1| glutamate racemase [Streptococcus thermophilus LMG 18311]
Length = 271
Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats.
Identities = 56/258 (21%), Positives = 101/258 (39%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V+++++ +P +Y+ D PYG +++ L L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELKRQLPYESIVYIGDSARAPYGPRPAGQIREYTWQLV-KFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA ++ +E++ + +P A ++SG I ++ TP T+
Sbjct: 62 LTKDVKMIVIACNTATAVVWEEIKESLDIPVLGVVLPGSSAAIKSSRSGQIGVIGTPMTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I Q ++ +S A VE + + + + + R
Sbjct: 122 SSNIYEQKIKRLAPQMNVLSLSCPRFAPIVESNEINSSVAKKIVYESMAPLVD-----RV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFDDHAL 250
D +VL CTHYPL+ + + + V +D+ R LL +++R
Sbjct: 177 DTLVLGCTHYPLLRPIIQNVMGLSVKLIDSGAETVRDVSVLLNYFEINRSREVKDKTEEY 236
Query: 251 FLSGKPDIAMRRLMQGFG 268
+ + Q G
Sbjct: 237 YTTASVLGFKEIAEQWLG 254
>gi|302206779|gb|ADL11121.1| Glutamate racemase [Corynebacterium pseudotuberculosis C231]
gi|302331332|gb|ADL21526.1| Glutamate racemase [Corynebacterium pseudotuberculosis 1002]
gi|308277024|gb|ADO26923.1| Glutamate racemase [Corynebacterium pseudotuberculosis I19]
Length = 297
Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats.
Identities = 62/259 (23%), Positives = 109/259 (42%), Gaps = 9/259 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I IFDSG+GGL V + + +P+ IY+ D PYG+ +++ M + + L
Sbjct: 33 SSPIGIFDSGVGGLTVARAIMEQLPQESVIYIGDTANSPYGSKPIAQVRELSMRIGDE-L 91
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA + +LR + +PA+++A A T++G I +L T T+
Sbjct: 92 VARGCKMIVIACNTATSAALRDLRERYSIPVVGVILPAVRRAVAATRNGKIGVLGTQGTI 151
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
L + ++ + S VE + +I +G +
Sbjct: 152 ASGAYQELFAA-SPGVEVYAQACPSFVSFVERGITSGR----QILGVAQGYTEGLQSAGV 206
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT---RVFDDHA 249
D +VL CTHYPL+ V + V + +S+ + +L R + +
Sbjct: 207 DTLVLGCTHYPLLTGVIQLAVGDNVTLISSSEECVKDVLKVLSRNDMLAEATADKPPSRS 266
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+G P + + M+ G
Sbjct: 267 FESTGDPALFEQLAMRFLG 285
>gi|326390909|ref|ZP_08212460.1| glutamate racemase [Thermoanaerobacter ethanolicus JW 200]
gi|325993057|gb|EGD51498.1| glutamate racemase [Thermoanaerobacter ethanolicus JW 200]
Length = 264
Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats.
Identities = 62/258 (24%), Positives = 109/258 (42%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL VL+++ ++P +IY D PYG+ + +KK + + +
Sbjct: 3 SRPIGVFDSGVGGLTVLKRLVEVLPGEDYIYFGDTKRVPYGDRSEEEIKKFAKQILNFMR 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACNT +I +S + + F + AA YT + I ++T T+
Sbjct: 63 -EQKVKAVVIACNTTCAVIN---KSEYDVVLFDVLKAGAESAALYTINKKIGAIATTRTV 118
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I ++ + +E+ I + K C E + K
Sbjct: 119 ESKSYEKNIKIIDKNIEVYQKACPEFVPLIEKGLYNSPIAYETANK----CLKELKEKDI 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTHYPL+ V ++ V +D + +A + L + + ++ F+
Sbjct: 175 DTLVLGCTHYPLMASVIEEIMGENVKIVDPAIKLAYDVKDYLLKKDLLNPQIRGKAEFFV 234
Query: 253 SGKPDIAMRRLMQGFGLK 270
SG D ++ G K
Sbjct: 235 SGDKDNFIKTAEMLLGEK 252
>gi|322411173|gb|EFY02081.1| glutamate racemase [Streptococcus dysgalactiae subsp. dysgalactiae
ATCC 27957]
Length = 264
Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 95/256 (37%), Gaps = 8/256 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I DSG+GGL V++++ +P +Y+ D PYG +++ L L
Sbjct: 4 RPIGFLDSGVGGLTVVRELMRQLPHEKVVYIGDSARAPYGPRPAEQIREYTWDLV-RFLL 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ V ACNTA + +E++ +P A T G + ++ TP T+
Sbjct: 63 TKNVKMIVFACNTATAVAWEEVKEALDIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I + ++ VE I+ KK + GK D
Sbjct: 123 SDIYRQKIQLLAPTVEVTSLACPKFVPIVESNE----IRSSVAKKVVYESLTPLVGK-ID 177
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHALF 251
+VL CTHYPL+ + + + V +D+ R LL + +R + H +
Sbjct: 178 TLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFEINGSRCQEKVKHHFY 237
Query: 252 LSGKPDIAMRRLMQGF 267
+ P+I
Sbjct: 238 TTASPEIFQEIASVWL 253
>gi|222086155|ref|YP_002544687.1| glutamate racemase [Agrobacterium radiobacter K84]
gi|221723603|gb|ACM26759.1| glutamate racemase [Agrobacterium radiobacter K84]
Length = 266
Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats.
Identities = 138/258 (53%), Positives = 190/258 (73%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+L+FDSGIGGL VL++ R LMPE FIYVADD GFPYG+WE+ AL++R++ LF+ +L
Sbjct: 9 KPVLMFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGDWEEQALRERIVGLFAKLLA 68
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
Y P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++
Sbjct: 69 DYDPEICIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 128
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI S+ +QCH+ LV S LA E Y G + +D + E+ CF+E +G++TD
Sbjct: 129 RAYTRDLIQSFATQCHVRLVGSENLARIAEAYIRGGTVSDDAVLAEVGQCFVEMDGRKTD 188
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++VLACTHYP + ++FR+L+PWPVDWLD +++IARRAR L+P++ D A+F S
Sbjct: 189 IVVLACTHYPFMANIFRRLAPWPVDWLDPAEAIARRARSLVPQVADAVHPDTYDFAVFTS 248
Query: 254 GKPDIAMRRLMQGFGLKS 271
G PD RRLMQGFGL++
Sbjct: 249 GTPDFPTRRLMQGFGLRA 266
>gi|50123157|ref|YP_052324.1| glutamate racemase [Pectobacterium atrosepticum SCRI1043]
gi|81643623|sp|Q6CZB6|MURI_ERWCT RecName: Full=Glutamate racemase
gi|49613683|emb|CAG77134.1| glutamate racemase [Pectobacterium atrosepticum SCRI1043]
Length = 285
Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats.
Identities = 84/272 (30%), Positives = 143/272 (52%), Gaps = 4/272 (1%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
+ ++ P + +IL+FDSG+GGL V ++R L+P+ H+IY D+ FPYG +
Sbjct: 11 ISLEAIPSNLPSRPTILVFDSGVGGLSVYDEIRQLLPDLHYIYAFDNEAFPYGEKSQQFI 70
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + S + ++Q L VIACNTA T+ LR F + +G VPA+K AA T++
Sbjct: 71 IERVVEIVSAVQQRHQLALVVIACNTASTISLPALRERF-TFPVVGVVPAVKPAAKLTRN 129
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T AT++R YT LI + + C I + S L E G I E++K +
Sbjct: 130 GVVGLLATRATVQRPYTHELITRFATDCQILSLGSSELVELAEAKLQGEAISISELQKIL 189
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ + D +VL CTH+PL+ + + P +D+ +IA+R L+ ++
Sbjct: 190 RPWL--RLTEPPDTVVLGCTHFPLLAEELKMVLPEGTRLVDSGAAIAKRTAWLIANLDNP 247
Query: 241 QTRVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271
+ L P +A + ++Q +G S
Sbjct: 248 PLSTDRNLVYCLKITPKVATLWPILQRYGFNS 279
>gi|153811627|ref|ZP_01964295.1| hypothetical protein RUMOBE_02019 [Ruminococcus obeum ATCC 29174]
gi|149832368|gb|EDM87453.1| hypothetical protein RUMOBE_02019 [Ruminococcus obeum ATCC 29174]
Length = 273
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 54/254 (21%), Positives = 96/254 (37%), Gaps = 8/254 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL V +++ +P +Y D PYG+ + + + L
Sbjct: 6 DAPIGVFDSGVGGLTVAREIMRNLPSEKIVYFGDTARVPYGSKSRDTVIRYSRQII-HFL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ Q VIACNTA D ++ K AA T + + ++ T T+
Sbjct: 65 KEQQAKAIVIACNTASAFALDAVQHEQDIPVLGVIGAGAKVAAEETVNKRVGVIGTVGTV 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + + + VEE + + + E + K
Sbjct: 125 GSGIHEAYLKKLDPEITVIGKACPLFVPLVEEGWLHDPVTVEVANR----YLQELKDKDV 180
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD---HA 249
D ++L CTHYPLI R++ V ++ + A + LL + N T ++ +
Sbjct: 181 DTLILGCTHYPLIRSTIREVMGEKVRLVNPAYETALELKNLLQKTNMLSTGQQEEEFPYR 240
Query: 250 LFLSGKPDIAMRRL 263
++S D
Sbjct: 241 FYVSDLADEFKEFA 254
>gi|258511815|ref|YP_003185249.1| glutamate racemase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257478541|gb|ACV58860.1| glutamate racemase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 281
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 58/256 (22%), Positives = 103/256 (40%), Gaps = 6/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSGIGGL V M+ +P +Y D PYG+ + +++ + + L+
Sbjct: 6 RPIGVFDSGIGGLTVFHAMKRRLPHESMVYFGDRARCPYGDRDPDEVERFALEI-GRYLE 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L V+ACNTA + L+ P QA +++G I ++ T T+
Sbjct: 65 RLGIKLLVVACNTATAVALPRLKQELGIDVVGVIEPGASQAIEASETGRIGVIGTSVTVS 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + + V+ + VE+ ++ D ++ + R D
Sbjct: 125 SHAYAEALRVLRPDVSVVEVACPLFVPLVEQ----GHVEGDAVEAVVRESLQPLLEARID 180
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALFL 252
+VL CTHYPL++ V R++ + + ++D+ A R +L D
Sbjct: 181 TLVLGCTHYPLLMPVIRRVLGPSIRVISSADATAERVARVLAERGLEAPDHREPDACFLT 240
Query: 253 SGKPDIAMRRLMQGFG 268
+G L FG
Sbjct: 241 TGDTASLRMALATWFG 256
>gi|85860927|ref|YP_463129.1| glutamate racemase [Syntrophus aciditrophicus SB]
gi|123517831|sp|Q2LXZ9|MURI_SYNAS RecName: Full=Glutamate racemase
gi|85724018|gb|ABC78961.1| glutamate racemase [Syntrophus aciditrophicus SB]
Length = 270
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 108/258 (41%), Gaps = 6/258 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I +FDSG+GGL V++ + +P + +Y D PYG + + ++ L
Sbjct: 9 HPIGVFDSGVGGLTVVRALMERLPFENILYFGDTARVPYGVKSVETINAYARQI-TEFLL 67
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ + L +IACNT + + + S P ++A A T++ + ++ TP T+
Sbjct: 68 RQEVKLLIIACNTMAAVARQSVESLSPVPVLDVIDAGARRAVAETRTHSVGVIGTPTTIN 127
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ I + I + +L VE + + + + D
Sbjct: 128 SNAYARAICRLAPETRIFSQACALLVPLVE----EGWLDHPVTRLTAQEYLRPVLAEHID 183
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALFL 252
+VL CTHYPL+ + + ++ + +D+++++A LL + R+ ++ ++
Sbjct: 184 TLVLGCTHYPLLKALLQDVAGPDIHLVDSAEAMADATAELLQVQHLTNPERIPPEYRFYV 243
Query: 253 SGKPDIAMRRLMQGFGLK 270
+ P + + G
Sbjct: 244 TDVPLRFQQIGERFLGRS 261
>gi|257069150|ref|YP_003155405.1| glutamate racemase [Brachybacterium faecium DSM 4810]
gi|256559968|gb|ACU85815.1| glutamate racemase [Brachybacterium faecium DSM 4810]
Length = 270
Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats.
Identities = 51/262 (19%), Positives = 98/262 (37%), Gaps = 12/262 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I IFDSG+GGL V + + +P+ +Y+ D PYG ++ + + +
Sbjct: 2 NNAPIGIFDSGVGGLTVARAVLDQLPQEELVYIGDTAHGPYGPRPIAEVRSLALEIMDE- 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + + VIACNTA + + R + PA+++A A T++ + +++T T
Sbjct: 61 LVGHGVKMLVIACNTASAAVLRDARERYDVPVIEVIQPAVRRAVAATRNRRVGVIATEGT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + + + VE + E+ + E
Sbjct: 121 VTSRAYEDAFAA-APDLTLTAQACPRFVEFVE----NGVVSGREVVEMAEEYLAPVREAE 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTHYP++ + V + +++ A L + +F
Sbjct: 176 VDTLVLGCTHYPMLAGPISYVMGPDVTLVSSAEETALDVYSQLQATEQLRETQRPPRHVF 235
Query: 252 L-----SGKPDIAMRRLMQGFG 268
+G + R + G
Sbjct: 236 SQTAFGTGS-ENFARLSRRFLG 256
>gi|307945604|ref|ZP_07660940.1| glutamate racemase [Roseibium sp. TrichSKD4]
gi|307771477|gb|EFO30702.1| glutamate racemase [Roseibium sp. TrichSKD4]
Length = 267
Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats.
Identities = 132/261 (50%), Positives = 182/261 (69%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ + ILIFDSGIGGL VL+++R L+P +YVADD GFP G+WE+ LK+RL+ LF
Sbjct: 1 MQDRQPILIFDSGIGGLTVLRELRLLLPYETILYVADDAGFPLGDWEEPPLKERLLQLFD 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+L ++QP SVIACNTAFTL + LR+ P AF+G VPAIK AA T SGL+S+L+TP
Sbjct: 61 GLLVRFQPKASVIACNTAFTLAGEALRAAQPDHAFVGTVPAIKPAAERTASGLVSVLATP 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+RR YT NLI S+ +QCH+ LV S LA+ E+ G + ++ +K EI+ CF+EK+G
Sbjct: 121 GTVRRAYTKNLIDSFATQCHVRLVGSDALAAHAEQELRGEPVSDEALKAEIDACFLEKDG 180
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+RTD++VLACTHYP + + FR+L+PWPVDWLD + +IAR+ +L + D A
Sbjct: 181 RRTDIVVLACTHYPFLANRFRKLAPWPVDWLDPAGAIARQVVRVLGDDLYLEPVSVPDTA 240
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
F SG+ +++RL+ GFGL
Sbjct: 241 HFTSGQSTASLKRLLAGFGLS 261
>gi|332291481|ref|YP_004430090.1| glutamate racemase [Krokinobacter diaphorus 4H-3-7-5]
gi|332169567|gb|AEE18822.1| glutamate racemase [Krokinobacter diaphorus 4H-3-7-5]
Length = 268
Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats.
Identities = 69/257 (26%), Positives = 123/257 (47%), Gaps = 6/257 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ + +I +FDSGIGG + +++ +P + IY+AD PYG + +
Sbjct: 1 MQHKGNIGLFDSGIGGTSIWKEVVTHLPYENTIYLADSKHAPYGAKSKEEIIALSVKNTE 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L + + V+ACNTA T D LR + + F+G PAIK AA +++ I IL+T
Sbjct: 61 K-LIQLGAKIIVVACNTATTNAIDYLRKNY-DIPFIGIEPAIKPAALNSKNKTIGILATK 118
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
TL T + + + V L +E ++ +K+ ++
Sbjct: 119 GTLNSTLFQDTSEKWTQGTKVIEVIGEGLVPLIER----GDLESSVLKELLKSYVAPMIT 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
++ D +VL C+HYP ++ + +L P V +D+ ++AR+ + +L I +T +H
Sbjct: 175 QKIDYLVLGCSHYPYLIPLLTELLPEEVTIIDSGLAVARQTKSVLTEIKALETATTGNHQ 234
Query: 250 LFLSGKPDIAMRRLMQG 266
LF +G P I + L++
Sbjct: 235 LFTNGDPSILKKVLVRF 251
>gi|306836771|ref|ZP_07469732.1| glutamate racemase [Corynebacterium accolens ATCC 49726]
gi|304567358|gb|EFM42962.1| glutamate racemase [Corynebacterium accolens ATCC 49726]
Length = 259
Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats.
Identities = 57/259 (22%), Positives = 104/259 (40%), Gaps = 7/259 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ I IFDSG+GGL V + + +P+ IY D PYG ++ + +
Sbjct: 3 NASSPIGIFDSGVGGLTVARAVMEQLPQESVIYKGDTAHGPYGPRPISQVRAFSQDIADE 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L + + VIACNTA + R + PA+++A + T++G I ++ T
Sbjct: 63 -LVERGCKMLVIACNTATAAFLHDARERYDIPILEVIRPAVRRAMSTTRNGKIGVIGTEG 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ +L + + + VE + +I EG + +
Sbjct: 122 TIKSGAYQDLFAVNPNVEAVAA-ACPDFVPFVERGITAGR----QILGVAEGYLAPLQAQ 176
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHA 249
D +VL CTHYPL+ + + V + +S+ + LL + H+
Sbjct: 177 GVDTLVLGCTHYPLLTGIIQLAMGENVSLVTSSEETTKDVMRLLTETDMLAPEGNQPVHS 236
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+G P++ + + G
Sbjct: 237 FESTGDPEVFAQLATRFLG 255
>gi|323126640|gb|ADX23937.1| glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis
ATCC 12394]
Length = 264
Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 95/256 (37%), Gaps = 8/256 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I DSG+GGL V++++ +P +Y+ D PYG +++ L L
Sbjct: 4 RPIGFLDSGVGGLTVVRELMRQLPHEKVVYIGDSARAPYGPRPAEQIREYTWDLV-RFLL 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ V ACNTA + +E++ +P A T G + ++ TP T+
Sbjct: 63 TKNVKMIVFACNTATAVAWEEVKEALDIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I + ++ VE I+ KK + GK D
Sbjct: 123 SDIYRQKIQLLAPTVEVASLACPKFVPIVESNE----IRSSVAKKVVYESLTPLVGK-ID 177
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHALF 251
+VL CTHYPL+ + + + V +D+ R LL + +R + H +
Sbjct: 178 TLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFEINGSRCQEKVKHHFY 237
Query: 252 LSGKPDIAMRRLMQGF 267
+ P+I
Sbjct: 238 TTASPEIFQEIASVWL 253
>gi|300859076|ref|YP_003784059.1| glutamate racemase [Corynebacterium pseudotuberculosis FRC41]
gi|300686530|gb|ADK29452.1| Glutamate racemase [Corynebacterium pseudotuberculosis FRC41]
Length = 297
Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats.
Identities = 62/259 (23%), Positives = 109/259 (42%), Gaps = 9/259 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I IFDSG+GGL V + + +P+ IY+ D PYG+ +++ M + + L
Sbjct: 33 SSPIGIFDSGVGGLTVARAIMEQLPQESVIYIGDTANSPYGSKPIAQVRELSMRIGDE-L 91
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA + +LR + +PA+++A A T++G I +L T T+
Sbjct: 92 VARGCKMIVIACNTATSAALRDLRERYSIPVVGVILPAVRRAVAATRNGKIGVLGTQGTI 151
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
L + ++ + S VE + +I +G +
Sbjct: 152 ASGAYQELFAA-SPGVEVYAQACPSFVSFVERGITSGR----QILGVTQGYTEGLQSAGV 206
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT---RVFDDHA 249
D +VL CTHYPL+ V + V + +S+ + +L R + +
Sbjct: 207 DTLVLGCTHYPLLTGVIQLAVGDNVTLISSSEECVKDVLKVLSRNDMLAEATADKPPSRS 266
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+G P + + M+ G
Sbjct: 267 FESTGDPALFEQLAMRFLG 285
>gi|251781827|ref|YP_002996129.1| glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis
GGS_124]
gi|242390456|dbj|BAH80915.1| glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis
GGS_124]
Length = 265
Score = 237 bits (604), Expect = 2e-60, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 95/256 (37%), Gaps = 8/256 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I DSG+GGL V++++ +P +Y+ D PYG +++ L L
Sbjct: 5 RPIGFLDSGVGGLTVVRELMRQLPHEKVVYIGDSARAPYGPRPAEQIREYTWDLV-RFLL 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ V ACNTA + +E++ +P A T G + ++ TP T+
Sbjct: 64 TKNVKMIVFACNTATAVAWEEVKEALDIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIA 123
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I + ++ VE I+ KK + GK D
Sbjct: 124 SDIYRQKIQLLAPTVEVASLACPKFVPIVESNE----IRSSVAKKVVYESLTPLVGK-ID 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHALF 251
+VL CTHYPL+ + + + V +D+ R LL + +R + H +
Sbjct: 179 TLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFEINGSRCQEKVKHHFY 238
Query: 252 LSGKPDIAMRRLMQGF 267
+ P+I
Sbjct: 239 TTASPEIFQEIASVWL 254
>gi|238892365|ref|YP_002917099.1| glutamate racemase [Klebsiella pneumoniae NTUH-K2044]
gi|238544681|dbj|BAH61032.1| glutamate racemase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
Length = 283
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 80/261 (30%), Positives = 142/261 (54%), Gaps = 6/261 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++L+FDSG+GGL V ++R L+P H+IY D+V FPYG + + +R++ + + +
Sbjct: 21 RPTVLVFDSGVGGLSVYNEIRQLLPNLHYIYAFDNVAFPYGEKSEEFIVERVVEIVTAVQ 80
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+Y L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T T+
Sbjct: 81 QRYPLALAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGIVGLLATRGTV 139
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT LI + ++C I ++ S L E G + +E+++ + +E
Sbjct: 140 KRPYTRELIDRFANECRIEMLGSAELVELAEAKLHGEPVPLEELRRILRPWLRMQEPP-- 197
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF- 251
D +VL CTH+PL+ +++ P +D+ +IARR LL ++ A
Sbjct: 198 DTVVLGCTHFPLLQEELQRVLPEGTRLIDSGAAIARRTAWLLEHEAPDAKSSDENKAFCM 257
Query: 252 -LSGKPDIAMRRLMQGFGLKS 271
L+ + + + +++ +G +
Sbjct: 258 ALTAETEQLL-PVLRRYGFST 277
>gi|313884172|ref|ZP_07817938.1| glutamate racemase [Eremococcus coleocola ACS-139-V-Col8]
gi|312620619|gb|EFR32042.1| glutamate racemase [Eremococcus coleocola ACS-139-V-Col8]
Length = 280
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 56/259 (21%), Positives = 98/259 (37%), Gaps = 10/259 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I DSG GGL VL++ +P IY+ D PYG +++ + ++ L +
Sbjct: 5 PIGFIDSGFGGLTVLKQSLKQLPNESSIYLGDSARAPYGVRSVDEIRRFIWQ-MTNFLRE 63
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ VIACNT DE+R++ + A T++ + I+ TPAT+
Sbjct: 64 KGIKMLVIACNTGAAAALDEIRASLAIPVVGVIHAGSRAAILTTENNKVGIIGTPATINS 123
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ +IH +Q + + VE ++ + E + + D
Sbjct: 124 DSYARIIHEKNAQLQVFSKACPDFVPIVE----ENQMVQPETMNTVANYLAPLKNAGVDT 179
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-----FDDHA 249
+VL CTHYP + ++ V+ +D+ LL N ++ H
Sbjct: 180 LVLGCTHYPHLRPQIQEFMGPEVELIDSGVETINEVSALLDYFNLSRSAEDAQKMPPTHT 239
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+ +G R G
Sbjct: 240 YYTTGSGAKFARFAQMWLG 258
>gi|227502996|ref|ZP_03933045.1| glutamate racemase [Corynebacterium accolens ATCC 49725]
gi|227076057|gb|EEI14020.1| glutamate racemase [Corynebacterium accolens ATCC 49725]
Length = 259
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 57/259 (22%), Positives = 103/259 (39%), Gaps = 7/259 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ I IFDSG+GGL V + + +P+ IY D PYG ++ + +
Sbjct: 3 NASSPIGIFDSGVGGLTVARAVMEQLPQESVIYKGDTAHGPYGPRPISQVRAFSQDIADE 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L + + VIACNTA + R + PA+++A + T++G I ++ T
Sbjct: 63 -LVERGCKMLVIACNTATAAFLHDARERYDIPILEVIRPAVRRAMSTTRNGKIGVIGTEG 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ +L + + + VE + +I EG + +
Sbjct: 122 TIKSGAYQDLFAVNPNVEAVAA-ACPDFVPFVERGITAGR----QILGVAEGYLAPLQAQ 176
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-HA 249
D +VL CTHYPL+ + V + +S+ + LL + H+
Sbjct: 177 GVDTLVLGCTHYPLLTGTIQLAMGENVSLVTSSEETTKDVMRLLTETDMLAPEGNQTVHS 236
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+G P++ + + G
Sbjct: 237 FESTGDPEVFAQLATRFLG 255
>gi|222152578|ref|YP_002561753.1| glutamate racemase [Streptococcus uberis 0140J]
gi|254766128|sp|B9DTR9|MURI_STRU0 RecName: Full=Glutamate racemase
gi|222113389|emb|CAR41037.1| glutamate racemase [Streptococcus uberis 0140J]
Length = 264
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 56/257 (21%), Positives = 100/257 (38%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P +YV D PYG +++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHESIVYVGDSARAPYGPRPADQIREFTWELVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + V ACNTA + +E+++ +P A T SG + ++ TP T+
Sbjct: 63 TK-NVKMIVFACNTATAVAWEEVKNALSIPVLGVILPGSSAAIKSTTSGKVGVIGTPMTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I Q + ++ VE + + + + +E +
Sbjct: 122 QSDIYRQKIQLLAPQIEVLSLACPKFVPIVESNETKSSVAKKIVYETLEPLVGK-----V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFDDHAL 250
D +VL CTHYPL+ + + + V +D+ R LL + +R D+
Sbjct: 177 DTLVLGCTHYPLLRPIIQNVMGSEVTLIDSGAECIRDISVLLNYFQINASREEKKADNLF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
F + D
Sbjct: 237 FTTAGTDTFKEIANAWL 253
>gi|327439324|dbj|BAK15689.1| glutamate racemase [Solibacillus silvestris StLB046]
Length = 266
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 55/257 (21%), Positives = 96/257 (37%), Gaps = 6/257 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V + + L+P Y+ D PYG ++ +
Sbjct: 1 MNAPIGVIDSGVGGLTVAKAIMELLPNETIYYIGDTARCPYGPRTKQEVRNFTWE-MAKA 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+K + VIACNTA + + L+ P + A T+ + +L+T T
Sbjct: 60 LEKMNVKMLVIACNTATAVALESLQKHMPFPVLGVINAGARAAIKKTKRNEVVVLATEGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + S ++ I ++ VE + D + E +R
Sbjct: 120 IKSGAYEEAVKSLSTKAKIIPLACPTFVPLVESGEYEGQFSYD----LVAKGLKPLEDER 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D ++L CTHYP++ V L +++ A+ +L +T H L
Sbjct: 176 FDTVILGCTHYPILQKQIEAAVGSQVHVLSSAEETAKDVEAILSYTGQLRTDEEPPKHIL 235
Query: 251 FLSGKPDIAMRRLMQGF 267
SG I +
Sbjct: 236 HASGSVPIFRSIAERWL 252
>gi|324997298|ref|ZP_08118410.1| glutamate racemase [Pseudonocardia sp. P1]
Length = 283
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 64/262 (24%), Positives = 108/262 (41%), Gaps = 8/262 (3%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
E+ + I IFDSG+GGL V + + L+P +YV D PYG +++ + +
Sbjct: 4 ERGIDAPIGIFDSGVGGLTVARSVIDLLPAEQIVYVGDTAHSPYGPRTIADIRRLALQIG 63
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L + VIACN+A + R +P PA+++A A T++G I ++ T
Sbjct: 64 DE-LVESGVKALVIACNSASAACLADFRERYPVPVVEVVRPAVRRAVAATRNGRIGVIGT 122
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ ++ + I V+ VE + ++ EG +
Sbjct: 123 QATIASGAYADAFDA-ARDTEITSVACPRFVDFVERGTTSGR----QVLGVAEGYLEPLQ 177
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-- 246
D +VL CTHYPL+ V + V + ++D AR L + +
Sbjct: 178 RAGVDTVVLGCTHYPLLTGVLEIVLGPDVTLVSSADETARTLVRTLHTRDLLRDDTAPAA 237
Query: 247 DHALFLSGKPDIAMRRLMQGFG 268
H +G P+ R + G
Sbjct: 238 AHRFLATGDPEPFRRLGRRFLG 259
>gi|49474225|ref|YP_032267.1| glutamate racemase [Bartonella quintana str. Toulouse]
gi|81647061|sp|Q6FZU3|MURI_BARQU RecName: Full=Glutamate racemase
gi|49239729|emb|CAF26111.1| Glutamate racemase [Bartonella quintana str. Toulouse]
Length = 270
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 127/260 (48%), Positives = 174/260 (66%), Gaps = 1/260 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL FDSGIGGL VL+++R L+PE FIYVADD GFPYGNWE++ LK ++ +F+++
Sbjct: 2 NERPILFFDSGIGGLTVLREVRVLIPETQFIYVADDAGFPYGNWEENVLKNHILKVFTNL 61
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L Y P L V+ACNT TL+ +LR FP F+G VPAIK AA T+SG IS+L+TP T
Sbjct: 62 LTLYNPTLCVVACNTVSTLMMADLRKEFPHTLFVGTVPAIKLAAKQTKSGFISVLATPGT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT LI+S+ QCH+ LV S LA+ E+Y G I +E++ EI CF E+ GK
Sbjct: 122 VKRAYTRELINSFAGQCHVQLVGSEKLAAFAEDYLRGKPIDLEELRNEILPCFFEQNGKY 181
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQTRVFDDHAL 250
TD IVLACTHYP ++++FR+ + WPV W+D + +IA+ R LL R+ T+ D AL
Sbjct: 182 TDTIVLACTHYPFLINLFREQALWPVKWIDPAKAIAKHIRSLLPERMYHKNTKKLKDFAL 241
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
F S + + L++ FGL
Sbjct: 242 FTSQNITSSTKHLLKEFGLN 261
>gi|327190530|gb|EGE57624.1| glutamate racemase protein (required for biosynthesis of
D-glutamate and peptidoglycan) [Rhizobium etli CNPAF512]
Length = 266
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 141/258 (54%), Positives = 188/258 (72%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
IL+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK+R++ LF +L
Sbjct: 9 KPILLFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEQALKERIIGLFGKLLT 68
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
Y P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++
Sbjct: 69 DYDPEVCIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 128
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI S+ QCH+ LV S LA E Y G + +D + EI+ CF+EK+ ++TD
Sbjct: 129 RAYTRDLIQSFAQQCHVRLVGSENLARMAEAYIRGDTVSDDAVLAEIDQCFVEKDDQKTD 188
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++VLACTHYP + ++FR+++PWPVDWLD +++IARRAR L+P I D A+F S
Sbjct: 189 IVVLACTHYPFMANLFRRIAPWPVDWLDPAEAIARRARTLVPLIADAVHPDNFDFAVFTS 248
Query: 254 GKPDIAMRRLMQGFGLKS 271
G+ D A RRLMQGFGL++
Sbjct: 249 GQQDFATRRLMQGFGLRA 266
>gi|241663373|ref|YP_002981733.1| glutamate racemase [Ralstonia pickettii 12D]
gi|240865400|gb|ACS63061.1| glutamate racemase [Ralstonia pickettii 12D]
Length = 280
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 58/258 (22%), Positives = 103/258 (39%), Gaps = 6/258 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ Q + +FDSG+GGL VL+ + +P +Y+AD PYG + +R + +
Sbjct: 4 RAQAPVGVFDSGLGGLSVLRAISAELPAESLLYLADSRHAPYGEKSPEFIAERTLRVCE- 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L VIACNTA LR ++ +G P +K A A ++S ++ +L+T +
Sbjct: 63 WLVDQGCKALVIACNTATAQAVHVLREKL-AVPVIGVEPGLKPAVATSKSRVVGVLATES 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TLR + L+ + C + L +E + + ++
Sbjct: 122 TLRSEKFARLLAAASGDCKVLSQPGYGLVPLIERGDT----HSPAVLELLQAYLQPMLDA 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D +VL CTHYP + R+++ + +D ++AR L +
Sbjct: 178 HADTLVLGCTHYPFLEDAIREIAGDRLTLIDTGHAVARHLGRTLSAAGLRSSDQAASPRF 237
Query: 251 FLSGKPDIAMRRLMQGFG 268
+G + G
Sbjct: 238 MSTGDVLPLQAMVAALLG 255
>gi|220913060|ref|YP_002488369.1| glutamate racemase [Arthrobacter chlorophenolicus A6]
gi|219859938|gb|ACL40280.1| glutamate racemase [Arthrobacter chlorophenolicus A6]
Length = 360
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 60/260 (23%), Positives = 103/260 (39%), Gaps = 11/260 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GGL V + + +P +YV D PYG ++ + + + L
Sbjct: 43 RPIGVFDSGVGGLTVARSIIDQLPNESILYVGDTAHGPYGPLPIAEVRANALGVMDE-LV 101
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTP 129
L IACN+A + + R + + + + PA+++A A T+SG + ++ T
Sbjct: 102 DSGVKLLTIACNSASAAVLRDARERYTAKYGIPVIEVIQPAVRRAVAATRSGRVGVIGTS 161
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ + + HI V+ S VE E+ E +
Sbjct: 162 ATVGSRAYEDTFAA-APDLHITSVACPEFVSYVEAGIT----TGPELLAVAEEYLAPLKA 216
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDH 248
D +VL CTHYPL+ V + V + +++ A+ L N +T +H
Sbjct: 217 SGVDTVVLGCTHYPLLTGVISYVMGADVTLVSSAEETAKDVYRALATNNLQRTAATPPEH 276
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+G + G
Sbjct: 277 HFVATGDAAQFETLARRFLG 296
>gi|150026137|ref|YP_001296963.1| glutamate racemase [Flavobacterium psychrophilum JIP02/86]
gi|149772678|emb|CAL44161.1| Glutamate racemase [Flavobacterium psychrophilum JIP02/86]
Length = 259
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 66/262 (25%), Positives = 112/262 (42%), Gaps = 12/262 (4%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
N I +FDSGIGG + +++ L+P + IY+AD PYG + +
Sbjct: 1 MSNNNPIGLFDSGIGGTSIWKEIHQLLPNENTIYLADSKNAPYGKKSKQEIIELCFKNID 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L + V+ACNTA T ++R + + +G PAIK AA TQ+ I IL+T
Sbjct: 61 -YLVSQNCKMIVVACNTATTNAIIQIREKYK-IPIIGIEPAIKPAANKTQTQTIGILATK 118
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ + + SY + I L +E I+ E+ K +
Sbjct: 119 GTINSELFNKQVESY-TNIKIIEQIGYGLVELIENGE----IESPEMTKLLTSYLEPMIK 173
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D +VL C+HYP +V +++ P + +D+ ++AR+ + +L + N T +
Sbjct: 174 ANIDYLVLGCSHYPYLVPAIKKIIPENIKIIDSGQAVARQTKTILEKNNLLNTTTKNSQQ 233
Query: 250 -LFLSGKPDIAMRRLMQGFGLK 270
+ + P + G
Sbjct: 234 IFYANSNPTVLKNI----LGFS 251
>gi|227113199|ref|ZP_03826855.1| glutamate racemase [Pectobacterium carotovorum subsp. brasiliensis
PBR1692]
Length = 285
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 81/272 (29%), Positives = 142/272 (52%), Gaps = 4/272 (1%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
+ + P + ++L+FDSG+GGL V ++R L+P+ H+IY D+ FPYG +
Sbjct: 11 ISQEAIPSNLPSRPTVLVFDSGVGGLSVYDEIRQLLPDLHYIYAFDNEAFPYGEKSQQFI 70
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Q L VIACNTA T+ LR F + +G VPA+K AA T++
Sbjct: 71 IERVVEIVNAVQLRHQLALVVIACNTASTISLPALRERF-TFPVVGVVPAVKPAAKLTRN 129
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T AT++R YT LI + + C I + S L E G I E+++ +
Sbjct: 130 GVVGLLATRATVQRPYTHELIARFATDCQILSLGSSELVELAEAKLQGETISISELQRIL 189
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ + D +VL CTH+PL+ + P +D+ +IA+R L+ ++
Sbjct: 190 RPWL--RLPEPPDTVVLGCTHFPLLAEELKMALPDGTRLVDSGSAIAKRTAWLIANLDNP 247
Query: 241 QTRVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271
+ L+ P +A + ++Q +G S
Sbjct: 248 PLSTDKNLVYCLTITPKVATLWPILQRYGFDS 279
>gi|190892000|ref|YP_001978542.1| glutamate racemase (required for biosynthesis of D-glutamate and
peptidoglycan) [Rhizobium etli CIAT 652]
gi|190697279|gb|ACE91364.1| glutamate racemase protein (required for biosynthesis of
D-glutamate and peptidoglycan) [Rhizobium etli CIAT 652]
Length = 266
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 139/258 (53%), Positives = 188/258 (72%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
IL+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK+R++ LF +L
Sbjct: 9 KPILLFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEQALKERIIGLFGKLLT 68
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
Y P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++
Sbjct: 69 DYDPEVCIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 128
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI S+ QC++ LV S LA E Y G + +D + EI+ CF+EK+ ++TD
Sbjct: 129 RAYTRDLIQSFAQQCNVRLVGSENLARMAEAYIRGDTVSDDAVLAEIDQCFVEKDDQKTD 188
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++VLACTHYP + ++FR+++PWPVDWLD +++IARRAR L+P + D A+F S
Sbjct: 189 IVVLACTHYPFMANLFRRIAPWPVDWLDPAEAIARRARTLVPLVADAVHPDNFDFAVFTS 248
Query: 254 GKPDIAMRRLMQGFGLKS 271
G+ D A RRLMQGFGL++
Sbjct: 249 GQQDFATRRLMQGFGLRA 266
>gi|241889903|ref|ZP_04777201.1| glutamate racemase [Gemella haemolysans ATCC 10379]
gi|241863525|gb|EER67909.1| glutamate racemase [Gemella haemolysans ATCC 10379]
Length = 264
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 56/257 (21%), Positives = 95/257 (36%), Gaps = 5/257 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ N+I +FDSG+GGL V +++ +P Y D PYG+ + K
Sbjct: 1 MNNAIGVFDSGVGGLTVAREIMRQLPNETIYYFGDVKNCPYGDKTKEEIIKNTDRAV-KF 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L L V+ACNTA D L++ + P ++A T++ + +L T T
Sbjct: 60 LIDKGVKLVVLACNTATAAALDYLQNKYEVPIIGVVQPGARRAIQATENNKVLVLGTKFT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
I + S + + +E + ++ K I
Sbjct: 120 ANSKVYDIEIENINSDIIVFDKACPAFVPFIE---SEGNLDKEATKNLISDTLGNTNTLG 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHAL 250
D +VL CTHYP++ + + + + AR +L HQ + +H
Sbjct: 177 VDTVVLGCTHYPILKKDIEEYYGNNIKVISSGREAAREVSTVLGYTKLHQKKFNKKEHRF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
F+S K D +
Sbjct: 237 FISQKSDNFDSIASKWL 253
>gi|300741330|ref|ZP_07071351.1| glutamate racemase [Rothia dentocariosa M567]
gi|300380515|gb|EFJ77077.1| glutamate racemase [Rothia dentocariosa M567]
Length = 346
Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats.
Identities = 57/268 (21%), Positives = 100/268 (37%), Gaps = 12/268 (4%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P I +FDSG+GGL V + + +P IYV D PYG + ++ +
Sbjct: 23 PAGPTSSAPIGVFDSGVGGLTVARAIMDQLPHERIIYVGDTAHGPYGPLKIAEVRANALR 82
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ----AAAYTQSGL 122
+ + L + VIACNTA + + R + + + I+ A A T++
Sbjct: 83 IMDE-LVDSGVKMLVIACNTASAAVLRDARERYTRHYGIPVIEVIQPAARRALAATRNRK 141
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I +++T AT+ + + V+ VE+ E+ + E
Sbjct: 142 IGVIATEATVTSRAYEDTFA-IAPNLMVQSVACPRFVEFVEKGVTSG----PELLRTAEE 196
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ D +VL CTHYPL+ + + V + ++D A+ L N
Sbjct: 197 YLQPLKDSGVDTLVLGCTHYPLLTGIISYIMGEDVTLVSSADETAKDVYRALLTENIENP 256
Query: 243 --RVFDDHALFLSGKPDIAMRRLMQGFG 268
H +G+ + + G
Sbjct: 257 DLETNPHHEFLATGESETFENLARRFLG 284
>gi|68535566|ref|YP_250271.1| glutamate racemase [Corynebacterium jeikeium K411]
gi|68263165|emb|CAI36653.1| murI [Corynebacterium jeikeium K411]
Length = 288
Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats.
Identities = 54/267 (20%), Positives = 111/267 (41%), Gaps = 9/267 (3%)
Query: 5 NYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64
N + I +FDSG+GGL V + + +P + +Y+ D PYG+ +++
Sbjct: 14 NVQAVQANNAPIGVFDSGVGGLTVARAIVDQLPHENLVYIGDTANSPYGDKPLAQVRELS 73
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
+ + L + + V+ACN+A + + R + +PA+++AAA T++G I
Sbjct: 74 IRIAD-TLAERGCKMIVVACNSASSAFIRDARERYSIPVVEVILPAVRRAAAATRNGRIG 132
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
++ T AT+ +L + + + VE + ++ E
Sbjct: 133 VIGTQATVNSMSYQDLFAAI-PGVEAYAQACPQFVPFVERGMTSGR----QLMGLAENYL 187
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
+ + D +VL CTHYPL+ V + + V +++++ A+ L +
Sbjct: 188 APLKAQGVDTVVLGCTHYPLLTGVVQLVMGEDVTLINSAEETAKTVYRTLAEQDLLADED 247
Query: 245 FD---DHALFLSGKPDIAMRRLMQGFG 268
+ + + +G P + + G
Sbjct: 248 SERTVNLSFESTGDPQRFAKLAGRFLG 274
>gi|304570642|ref|YP_832062.2| glutamate racemase [Arthrobacter sp. FB24]
Length = 351
Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats.
Identities = 60/268 (22%), Positives = 105/268 (39%), Gaps = 12/268 (4%)
Query: 7 PCEKKL-QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
P + + I IFDSG+GGL V + + +P +YV D PYG ++ +
Sbjct: 35 PDDSPMGSRPIGIFDSGVGGLTVARSIIDQLPNESILYVGDTANGPYGPLPIAEVRANAL 94
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSG 121
+ + L L IACN+A + + R + + + + PA+++A A T+SG
Sbjct: 95 GVMDE-LVDSGVKLLTIACNSASAAVLRDARERYTARYGIPVIEVIQPAVRRAVAATRSG 153
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ ++ T AT+ + + HI V+ S VE E+
Sbjct: 154 RVGVIGTSATIGSRAYEDTFAA-APDLHITSVACPAFVSYVEAGIT----TGPELLAVAR 208
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
D +VL CTHYPL+ V + V + +++ A+ L + +
Sbjct: 209 EYLEPLRTAGVDTVVLGCTHYPLLTGVISYVMGEDVTLVSSAEETAKDVYRALVSHDLQR 268
Query: 242 T-RVFDDHALFLSGKPDIAMRRLMQGFG 268
T +H +G+ + G
Sbjct: 269 TLEAPPEHHFIATGEAGQFETLARRFLG 296
>gi|289551045|ref|YP_003471949.1| Glutamate racemase [Staphylococcus lugdunensis HKU09-01]
gi|289180577|gb|ADC87822.1| Glutamate racemase [Staphylococcus lugdunensis HKU09-01]
Length = 266
Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats.
Identities = 55/257 (21%), Positives = 90/257 (35%), Gaps = 5/257 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K L +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIIRQLPNETIYYLGDIARCPYGPRPGDEVKAFTTELANK- 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L ++ + VIACNTA + + L+ P + A T++ + IL T T
Sbjct: 60 LMEFDIKMLVIACNTATAVALEHLQHILSIPVIGVIEPGARTAIMTTKNQHVLILGTEGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + I + V+ VE+ I I
Sbjct: 120 IKSEAYRHHIKRINPNVEVTGVACPGFVPLVEQMRYNDPTITSII---IHQTLKHWRNSI 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D ++L CTHYPL+ + + AR LL N H + H
Sbjct: 177 ADTVILGCTHYPLLYQPLNDYFGGDKTVISSGLETAREVSALLTFSNEHASYTAQPQHRF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
F +G + +
Sbjct: 237 FSTGDTTHITNIIAEWL 253
>gi|160947016|ref|ZP_02094219.1| hypothetical protein PEPMIC_00978 [Parvimonas micra ATCC 33270]
gi|158447400|gb|EDP24395.1| hypothetical protein PEPMIC_00978 [Parvimonas micra ATCC 33270]
Length = 267
Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats.
Identities = 56/261 (21%), Positives = 109/261 (41%), Gaps = 7/261 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
SI +FDSGIGGL V++++ ++P +Y D PYG + +K+ L
Sbjct: 3 NRSIGVFDSGIGGLTVVKELTKILPNEKIVYFGDTARVPYGTRSEETIKRFSKECIE-FL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ +IACNT + + L+ F +P K A+ T++ I ++ T AT+
Sbjct: 62 NQKDIKALIIACNTVSAVALEMLKELFDIYILGVIIPGSKMASYVTKNKKIGVIGTNATV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I S S+ ++ + + VEE +I + K E +
Sbjct: 122 LSGAYEKCIKSENSENIVYSKACPLFVPIVEEGLSNTEIALETAKY----YLNELINQDV 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHAL 250
D IV+ CTHYP++ + + + + ++ + A + L N + ++
Sbjct: 178 DTIVMGCTHYPILENTIKAVVGKDISLVNPAKETANEMKKYLEFNNLLNEESENIKNNIF 237
Query: 251 FLSGKPDIAMRRLMQGFGLKS 271
+++ + + L+ + S
Sbjct: 238 YITDDENKFKKNLLDFIKIDS 258
>gi|24380092|ref|NP_722047.1| glutamate racemase [Streptococcus mutans UA159]
gi|29839525|sp|Q8DSQ5|MURI_STRMU RecName: Full=Glutamate racemase
gi|24378087|gb|AAN59353.1|AE015000_11 putative glutamate racemase [Streptococcus mutans UA159]
Length = 264
Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats.
Identities = 56/257 (21%), Positives = 100/257 (38%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P IY+ D PYG +K L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKTYTWELVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + + V ACNTA ++ +E++ +P A T SG I I+ TP T+
Sbjct: 63 TK-KVKMIVFACNTATAVVWEEVKEKLDIPVLGVILPGSSAAIKSTISGQIGIIGTPMTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I Q + ++ VE + + + + + +
Sbjct: 122 KSNIYEQKIRDLSPQMKVRSLACPKFVPIVESNKMNSSVAKKIVYESLSPLVGK-----I 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHAL 250
D +VL CTHYPL+ + + + V+ +D+ R LL + +++R H
Sbjct: 177 DTLVLGCTHYPLLRPIIQNVMGPDVELIDSGAECVRDISVLLNYFDLNRSRTSKVLHHRF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
+ +
Sbjct: 237 YTTASVASFKEIASDWL 253
>gi|311113410|ref|YP_003984632.1| glutamate racemase [Rothia dentocariosa ATCC 17931]
gi|310944904|gb|ADP41198.1| glutamate racemase [Rothia dentocariosa ATCC 17931]
Length = 346
Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats.
Identities = 58/268 (21%), Positives = 101/268 (37%), Gaps = 12/268 (4%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P I +FDSG+GGL V + + +P IYV D PYG + ++ +
Sbjct: 23 PAGPTSSAPIGVFDSGVGGLTVARAIMDQLPHERIIYVGDTAHGPYGPLKIAEVRANALR 82
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ----AAAYTQSGL 122
+ + L + VIACNTA + + R + + + I+ A A T++
Sbjct: 83 IMDE-LVDSGVKMLVIACNTASAAVLRDARERYTRHYGIPVIEVIQPAARRALAATRNRK 141
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I +++T AT+ + + V+ VE+ E+ + E
Sbjct: 142 IGVIATEATVTSRAYEDTFA-IAPNLMVQSVACPRFVEFVEKGVTSG----PELLRTAEE 196
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ R D +VL CTHYPL+ + + V + ++D A+ L N
Sbjct: 197 YLQPLKDSRVDTLVLGCTHYPLLTGIISYIMGEGVTLVSSADETAKDVYRALLTENIENP 256
Query: 243 --RVFDDHALFLSGKPDIAMRRLMQGFG 268
H +G+ + + G
Sbjct: 257 DLETNPHHEFLATGESETFENLARRFLG 284
>gi|284928811|ref|YP_003421333.1| glutamate racemase [cyanobacterium UCYN-A]
gi|284809270|gb|ADB94975.1| glutamate racemase [cyanobacterium UCYN-A]
Length = 281
Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats.
Identities = 55/255 (21%), Positives = 108/255 (42%), Gaps = 7/255 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL V Q++ L+P+ +Y AD+ PYGN + + + + + +
Sbjct: 8 PIGIFDSGVGGLTVFQEIHKLLPQESILYFADNARLPYGNRSSTEILQFVREILNWMSYS 67
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ ++V+ACNT+ L + +R F +P + A Y+ + ++ST AT +
Sbjct: 68 -KVKMAVMACNTSSALALEAVRKEFNFPILGVVLPGARAATKYSH--RVGVISTLATAKS 124
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
I + V L +E ++ +KK K D
Sbjct: 125 DSYRQAIQEINPNIKVWQVGCPELVPLIERDKIYDFHTQEILKK----YINPLLEKNIDT 180
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
++ CTHY + + + + P+ ++ +D + +A+ + L ++ + + ++G
Sbjct: 181 LIYGCTHYRHLEEIIKNIIPYKIELIDPAYYVAQSVKKELEIMSLRKRSPGFNVRFVVTG 240
Query: 255 KPDIAMRRLMQGFGL 269
P R + G
Sbjct: 241 SPKNFSRLSKKCLGY 255
>gi|145222944|ref|YP_001133622.1| glutamate racemase [Mycobacterium gilvum PYR-GCK]
gi|145215430|gb|ABP44834.1| glutamate racemase [Mycobacterium gilvum PYR-GCK]
Length = 278
Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 12/261 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL V + + +P IYV D PYG ++ + + D L
Sbjct: 7 RPIGIFDSGVGGLTVARAVIDQLPHEDIIYVGDTGNGPYGPLTIPQIRAHALAIGDD-LA 65
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
VIACN+A + + R + + + + PA+++A A T++G I ++ T AT+
Sbjct: 66 GRGIKALVIACNSASSACLRDARERYAPIPVVEVILPAVRRAVAATRNGRIGVIGTAATI 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + V+ VE + ++ E + +
Sbjct: 126 ASGAYQDSFAA-ARDIEVFGVACPRFVDFVERGVTSGR----QVLGLAEAYLEPLQRAQV 180
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD----- 247
D +VL CTHYP++ + + V + +++ A+ +L + D
Sbjct: 181 DTLVLGCTHYPMLSGLIQLAMGDHVTLVSSAEETAKDLLRVLTERELLKPHTGDPAAPAR 240
Query: 248 HALFLSGKPDIAMRRLMQGFG 268
+G P+ + G
Sbjct: 241 RVFEATGDPEAFTALAARFLG 261
>gi|329770518|ref|ZP_08261896.1| glutamate racemase [Gemella sanguinis M325]
gi|328836267|gb|EGF85936.1| glutamate racemase [Gemella sanguinis M325]
Length = 264
Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats.
Identities = 51/257 (19%), Positives = 98/257 (38%), Gaps = 5/257 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ N+I +FDSG+GGL V +++ +P Y D PYG+ + +
Sbjct: 1 MNNAIGVFDSGVGGLTVAREIMRQLPNETIYYFGDVKNCPYGDKKKDEIIINTEKAI-KY 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + ++ACNTA + L+ + P ++A T++ + +L T T
Sbjct: 60 LINQGVKMIILACNTATAAALEYLQEKYDLPIIGVVQPGARRAIQATENNKVLVLGTKFT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
I + S ++ + +E + ++E I+ +
Sbjct: 120 TTSEVYDIEIQNINSDIVVYDKACPSFVPFIE---SEGYLNKEEADDIIKETLNDTIDLG 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHAL 250
D +VL CTHYP++ + + + + AR +L HQ++ +H
Sbjct: 177 MDTVVLGCTHYPMLKKNIEEFYGNQIKVISSGREAAREVSTVLGYSKLHQSKVNKTEHKF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
F+S K + +
Sbjct: 237 FISAKSENFDNIASKWL 253
>gi|227329569|ref|ZP_03833593.1| glutamate racemase [Pectobacterium carotovorum subsp. carotovorum
WPP14]
Length = 285
Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats.
Identities = 83/272 (30%), Positives = 142/272 (52%), Gaps = 4/272 (1%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
+ + P + +IL+FDSG+GGL V ++R L+P+ H+IY D+ FPYG +
Sbjct: 11 ISQEAIPSNLPSRPTILVFDSGVGGLSVYDEIRQLLPDLHYIYAFDNEAFPYGEKSQQFI 70
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Q L VIACNTA T+ LR F + +G VPA+K AA T++
Sbjct: 71 IERVVEIVNAVQQRHQLALVVIACNTASTISLPALRERF-TFPVVGVVPAVKPAAKLTRN 129
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T AT++R YT LI + + C I + S L E G I E++K +
Sbjct: 130 GVVGLLATRATVQRPYTHELIARFATDCQILSLGSSELVELAESKLQGETISISELQKIL 189
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ + D +VL CTH+PL+ + P +D+ +IA+R L+ ++
Sbjct: 190 RPWL--RLPEPPDTVVLGCTHFPLLAEELKMALPDGTRLVDSGAAIAKRTAWLIANLDNP 247
Query: 241 QTRVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271
+ L+ P +A + ++Q +G S
Sbjct: 248 PLSTDKNLVYCLAITPKVATLWPILQRYGFDS 279
>gi|229822946|ref|ZP_04449016.1| hypothetical protein GCWU000282_00238 [Catonella morbi ATCC 51271]
gi|229787759|gb|EEP23873.1| hypothetical protein GCWU000282_00238 [Catonella morbi ATCC 51271]
Length = 286
Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats.
Identities = 49/258 (18%), Positives = 94/258 (36%), Gaps = 10/258 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I DSG GGL V+++ +P IY+ D+ PYG +K + L + L K
Sbjct: 8 PIGFIDSGYGGLTVVKQSLKQLPNESIIYLGDNARCPYGPRSMEEVKDYIWQL-TRFLLK 66
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ VIACNT +E+R T P + A T++ I ++ T T+
Sbjct: 67 KGIKMLVIACNTGTAAALEEIRQTLDIPVVGVIHPGSRAAIERTENNHIGVIGTQGTIAS 126
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
++ + V+ VE++ + ++++ + + D
Sbjct: 127 NLYERVMKDKADYLQVTSVACPSFVQLVEDHQLNSPLAWQQVRESLSA----FDQTGIDT 182
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-----FDDHA 249
+V+ CTHYP + + + + V +D+ LL ++
Sbjct: 183 LVMGCTHYPHLKPLIQAVMGQGVTLIDSGVETLNEVSMLLDYFGLSRSAKDAQIQPPSQH 242
Query: 250 LFLSGKPDIAMRRLMQGF 267
+ +G + +
Sbjct: 243 FYTTGDAKQFAQFVTAWL 260
>gi|50913675|ref|YP_059647.1| glutamate racemase [Streptococcus pyogenes MGAS10394]
gi|68052498|sp|Q5XDP9|MURI_STRP6 RecName: Full=Glutamate racemase
gi|50902749|gb|AAT86464.1| Glutamate racemase [Streptococcus pyogenes MGAS10394]
Length = 264
Score = 236 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 57/256 (22%), Positives = 96/256 (37%), Gaps = 8/256 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I DSG+GGL V+ ++ +P +Y+ D PYG +K+ L + L
Sbjct: 4 RPIGFLDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVN-FLL 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ V ACNTA + +E+++T +P A T G + ++ TP T+
Sbjct: 63 TQNVKMIVFACNTATAVAWEEVKATLDIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I + ++ VE + KK + GK D
Sbjct: 123 SDIYRKKIQLLAPSVQVRSLACPKFVPIVESNE----MCSSIAKKIVYDSLSPLVGK-ID 177
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHALF 251
+VL CTHYPL+ + + + V +D+ R LL + + + +H F
Sbjct: 178 TLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQKAVEHRFF 237
Query: 252 LSGKPDIAMRRLMQGF 267
+ P+I
Sbjct: 238 TTANPEIFQEIASIWL 253
>gi|71902958|ref|YP_279761.1| glutamate racemase [Streptococcus pyogenes MGAS6180]
gi|123640458|sp|Q48V50|MURI_STRPM RecName: Full=Glutamate racemase
gi|71802053|gb|AAX71406.1| glutamate racemase [Streptococcus pyogenes MGAS6180]
Length = 264
Score = 236 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 94/256 (36%), Gaps = 8/256 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I DSG+GGL V+ ++ +P +Y+ D PYG +K+ L + L
Sbjct: 4 RPIGFLDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVN-FLL 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ V ACNTA + +E+++ +P A T G + ++ TP T+
Sbjct: 63 TQNVKMIVFACNTATAVAWEEVKAALDIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I + ++ VE + KK + GK D
Sbjct: 123 SDIYRKKIQLLAPSVQVRSLACPKFVPIVESNE----MCSSIAKKIVYDSLSPLVGK-ID 177
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHALF 251
+VL CTHYPL+ + + + V +D+ R LL + + + H F
Sbjct: 178 TLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQKAVKHRFF 237
Query: 252 LSGKPDIAMRRLMQGF 267
+ P+I
Sbjct: 238 TTANPEIFQEIASIWL 253
>gi|153853948|ref|ZP_01995281.1| hypothetical protein DORLON_01272 [Dorea longicatena DSM 13814]
gi|149753330|gb|EDM63261.1| hypothetical protein DORLON_01272 [Dorea longicatena DSM 13814]
Length = 316
Score = 236 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 56/250 (22%), Positives = 100/250 (40%), Gaps = 6/250 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I +FDSG+GGL V +++ +P + +Y D PYG+ + + + + L
Sbjct: 53 AIGVFDSGVGGLTVTREIMRQLPNENVVYFGDTARVPYGSKSKNNIIRFSRQII-RFLKT 111
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
VIACNTA L + ++ F VP + A T++G I +L T AT++
Sbjct: 112 KNVKAIVIACNTASALALETVQQEFDIPIIGVIVPGARAAVRETRNGQIGVLGTEATIKS 171
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ I + + + + VEE KI E+ I+ + D
Sbjct: 172 ETYTKEIRKLMPEAEVIGKPCPLFVPLVEEGFAKHKITEEV----IDIYLSDMRKSEIDT 227
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALFLS 253
++L CTHYPL+ V ++ + A + +L T + ++S
Sbjct: 228 LILGCTHYPLLRSRIMAYFGEKVHIVNPAYETAMDLKKILEEQKIANTSGEPAAYDFYVS 287
Query: 254 GKPDIAMRRL 263
+ +
Sbjct: 288 DAAEKFKKFA 297
>gi|289706341|ref|ZP_06502699.1| glutamate racemase [Micrococcus luteus SK58]
gi|289556836|gb|EFD50169.1| glutamate racemase [Micrococcus luteus SK58]
Length = 310
Score = 236 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 57/264 (21%), Positives = 95/264 (35%), Gaps = 16/264 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GGL V + + +P +YV D PYG ++ + + + L
Sbjct: 13 PIGVFDSGVGGLTVARAIMDQLPHESILYVGDTEHSPYGPRPIAEVRALALAIMDE-LVA 71
Query: 75 YQPVLSVIACNTAFTLIKDELRST----FPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
VIACN+A + + R PA+++A A T++G I ++ T A
Sbjct: 72 RGVKALVIACNSASAAVLRDARERYTGGHGIPVIEVIQPAVRRAVAATRTGRIGVIGTEA 131
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + + I V+ VE E+ +
Sbjct: 132 TVGSRAYEDSFSA-APHLEITSVACPRFVEFVEAGIT----TGPELLETAREYTAPLRAA 186
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--- 247
D +VL CTHYPL+ + V + +++ A+ L R+
Sbjct: 187 GVDTLVLGCTHYPLLTGALSLVMGEDVTLVSSAEETAKDLYRELVRLGLEHPHSAAGSGQ 246
Query: 248 ---HALFLSGKPDIAMRRLMQGFG 268
H +G PD + G
Sbjct: 247 ATRHRFAATGDPDHFQALARRFLG 270
>gi|21909798|ref|NP_664066.1| glutamate racemase [Streptococcus pyogenes MGAS315]
gi|28896509|ref|NP_802859.1| glutamate racemase [Streptococcus pyogenes SSI-1]
gi|25453114|sp|Q8K8I8|MURI_STRP3 RecName: Full=Glutamate racemase
gi|21903983|gb|AAM78869.1| putative glutamate racemase [Streptococcus pyogenes MGAS315]
gi|28811763|dbj|BAC64692.1| putative glutamate racemase [Streptococcus pyogenes SSI-1]
Length = 264
Score = 236 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 94/256 (36%), Gaps = 8/256 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I DSG+GGL V+ ++ +P +Y+ D PYG +K+ L + L
Sbjct: 4 RPIGFLDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVN-FLL 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ V ACNTA + +E+++ +P A T G + ++ TP T+
Sbjct: 63 TQNVKMIVFACNTATAVAWEEVKAALDIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I + ++ VE + KK + GK D
Sbjct: 123 SDIYRKKIQLLAPSVQVRSLACPKFVPIVESNE----MCSSIAKKIVYDSLAPLVGK-ID 177
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHALF 251
+VL CTHYPL+ + + + V +D+ R LL + + + H F
Sbjct: 178 TLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQKAVKHRFF 237
Query: 252 LSGKPDIAMRRLMQGF 267
+ P+I
Sbjct: 238 TTANPEIFQEIASIWL 253
>gi|289577814|ref|YP_003476441.1| glutamate racemase [Thermoanaerobacter italicus Ab9]
gi|289527527|gb|ADD01879.1| glutamate racemase [Thermoanaerobacter italicus Ab9]
Length = 264
Score = 236 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 61/257 (23%), Positives = 108/257 (42%), Gaps = 8/257 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL VL+++ ++P +IY D PYG+ + +KK + + +
Sbjct: 4 RPIGIFDSGVGGLTVLKRLVEVLPGEDYIYFGDTKRVPYGDRSEEEIKKFAKQILNFMR- 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ + VIACNT +I +S + + F + AA YT + I +++T T+
Sbjct: 63 EQKVKAVVIACNTTCAVIN---KSEYDVVLFDVLKAGAESAALYTINKKIGVIATTRTVE 119
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I ++ + +E+ + C E + + D
Sbjct: 120 SKSYEKNIKIIDKNIKVYQKACPEFVPLIEKGLYN----SPIAYETASNCLKELKERDID 175
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTHYPL++ V ++ V +D + +A + L R + + F+S
Sbjct: 176 TLVLGCTHYPLMMEVIEEIVGENVKIVDPAIKLAYDVKDYLLRRDLFNIQNIGKTKFFVS 235
Query: 254 GKPDIAMRRLMQGFGLK 270
G D ++ G K
Sbjct: 236 GDKDNFIKTAEMLLGEK 252
>gi|309782392|ref|ZP_07677116.1| glutamate racemase [Ralstonia sp. 5_7_47FAA]
gi|308918729|gb|EFP64402.1| glutamate racemase [Ralstonia sp. 5_7_47FAA]
Length = 282
Score = 236 bits (601), Expect = 4e-60, Method: Composition-based stats.
Identities = 58/258 (22%), Positives = 101/258 (39%), Gaps = 6/258 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + +R + +
Sbjct: 4 RAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKPPEFIAERTLRVCE- 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L VIACNTA LR ++ +G P +K A A ++S ++ +L+T +
Sbjct: 63 WLVDQGCKALVIACNTATAQAVHVLREKL-AVPVIGVEPGLKPAVATSKSRVVGVLATES 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TLR + L+ C + L +E + + +
Sbjct: 122 TLRSEKFARLLAGASGDCKVLSQPGYGLVPLIERGDT----HSPAVLELLRAYLQPMLDA 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D +VL CTHYP + +++ + +D ++AR L +
Sbjct: 178 NADTLVLGCTHYPFLEDAIHEIAGDRLTLIDTGHAVARHLGRTLAAAGLQASGQAATPCF 237
Query: 251 FLSGKPDIAMRRLMQGFG 268
+G + G
Sbjct: 238 MSTGDVLPLQAMVAALLG 255
>gi|291546372|emb|CBL19480.1| glutamate racemase [Ruminococcus sp. SR1/5]
Length = 273
Score = 236 bits (601), Expect = 4e-60, Method: Composition-based stats.
Identities = 51/254 (20%), Positives = 101/254 (39%), Gaps = 8/254 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +FDSGIGGL V +++ +P +Y D PYG+ + + + L
Sbjct: 6 NAPVGVFDSGIGGLTVAREIMRNLPSEKIVYFGDTARVPYGSKSRETVIRYSRQII-HFL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + V+ACNTA D ++ K AA T++ + I+ T T+
Sbjct: 65 QEQKVKAIVVACNTASAFALDAVKDELDIPILGVIEAGAKVAAQETRNKRVGIIGTVGTV 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
++ + + + + + VEE + E+ ++ E + +
Sbjct: 125 GSGIHASYLKELDPEITVIGKACPLFVPLVEEGWYHDPVTEEVARR----YLKELQEQEI 180
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD---HA 249
D ++L CTHYPL+ R++ V ++ + A + LL R++ V + +
Sbjct: 181 DTLILGCTHYPLLRSTIRKIMGEEVCLVNPAYETALELKKLLSRLDLSSNEVAQEEFPYR 240
Query: 250 LFLSGKPDIAMRRL 263
++S +
Sbjct: 241 FYVSDLAEKFKDFA 254
>gi|220906704|ref|YP_002482015.1| glutamate racemase [Cyanothece sp. PCC 7425]
gi|219863315|gb|ACL43654.1| glutamate racemase [Cyanothece sp. PCC 7425]
Length = 295
Score = 236 bits (601), Expect = 4e-60, Method: Composition-based stats.
Identities = 65/271 (23%), Positives = 109/271 (40%), Gaps = 10/271 (3%)
Query: 2 KIDNYPCEKKLQN--SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHA 59
+ P + L SI +FDSG+GGL VL+ ++ +P+ F+Y AD PYGN
Sbjct: 10 GLSLRPANQSLSQQASIGVFDSGVGGLTVLRVLQQHLPQESFLYFADTAHLPYGNRCQAE 69
Query: 60 LKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119
+ + + + + + ++ACNT+ L D +R+ F +P + A +
Sbjct: 70 IVTFARQILTWM-TEQGVKMVIVACNTSSALALDIVRTEFNLPILGLILPGARTAVQ--R 126
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
I I++T AT+ I Q + +S +E+ + +
Sbjct: 127 GKRIGIIATAATVASECYPQAILEANPQLQVWQMSCPEFVPLIEQNRINDPYTLEVART- 185
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
R D ++ CTHYP + V R++ P V +D + S+ A L +
Sbjct: 186 ---YLQPLIESRIDTLIYGCTHYPHLESVIRKVLPRSVQRIDPARSVVTAAARELELLGL 242
Query: 240 -HQTRVFDDHALFLSGKPDIAMRRLMQGFGL 269
Q+R F SG P+ R Q G
Sbjct: 243 RKQSRQTSSTRFFASGCPEQFARVSSQWLGY 273
>gi|257438473|ref|ZP_05614228.1| glutamate racemase [Faecalibacterium prausnitzii A2-165]
gi|257199052|gb|EEU97336.1| glutamate racemase [Faecalibacterium prausnitzii A2-165]
Length = 274
Score = 236 bits (601), Expect = 4e-60, Method: Composition-based stats.
Identities = 55/258 (21%), Positives = 94/258 (36%), Gaps = 3/258 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL ++++R +P + +Y D PYG+ + + + +L
Sbjct: 3 NRPIGVFDSGLGGLTGVRELRRRLPHENIVYFGDTGRVPYGSRSPETILQYARQDIAFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + AC T + P A ++AA T++ I ++ T AT+
Sbjct: 63 SK-DVKCIMAACGTVSSTYPAAEAEKLPVPYLGVVDAAAREAAFSTRNRRIGVIGTAATI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE--DEIKKEIEGCFIEKEGK 190
R L+ V I + VE + + K I E
Sbjct: 122 RSRSYEALLRRLVPGVEITARPCPLFVPLVEAGYVDHSAPDKQEITKLVIAQYLTEIRDA 181
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D ++L CTHYPLI + + V +D + + A +L
Sbjct: 182 GVDTLILGCTHYPLIKTMIGEFMGRNVVLVDPAKTAAHHLERILSERGLKADHPAGQAHF 241
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S PD ++ G
Sbjct: 242 YVSDAPDGFVQTADLFLG 259
>gi|56808577|ref|ZP_00366308.1| COG0796: Glutamate racemase [Streptococcus pyogenes M49 591]
gi|94987933|ref|YP_596034.1| glutamate racemase [Streptococcus pyogenes MGAS9429]
gi|94991817|ref|YP_599916.1| glutamate racemase [Streptococcus pyogenes MGAS2096]
gi|209558858|ref|YP_002285330.1| glutamate racemase [Streptococcus pyogenes NZ131]
gi|166231057|sp|Q1JDD6|MURI_STRPB RecName: Full=Glutamate racemase
gi|166231058|sp|Q1JNA9|MURI_STRPC RecName: Full=Glutamate racemase
gi|226707592|sp|B5XJX3|MURI_STRPZ RecName: Full=Glutamate racemase
gi|94541441|gb|ABF31490.1| glutamate racemase [Streptococcus pyogenes MGAS9429]
gi|94545325|gb|ABF35372.1| Glutamate racemase [Streptococcus pyogenes MGAS2096]
gi|209540059|gb|ACI60635.1| Glutamate racemase [Streptococcus pyogenes NZ131]
Length = 264
Score = 236 bits (601), Expect = 4e-60, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 94/256 (36%), Gaps = 8/256 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I DSG+GGL V+ ++ +P +Y+ D PYG +K+ L + L
Sbjct: 4 RPIGFLDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVN-FLL 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ V ACNTA + +E+++ +P A T G + ++ TP T+
Sbjct: 63 TQNVKMIVFACNTATAVAWEEVKAALDIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I + ++ VE + KK + GK D
Sbjct: 123 SDIYRKKIQLLAPSIQVRSLACPKFVPIVESNE----MCSSIAKKIVYDSLAPLVGK-ID 177
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHALF 251
+VL CTHYPL+ + + + V +D+ R LL + + + H F
Sbjct: 178 TLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQKAVKHRFF 237
Query: 252 LSGKPDIAMRRLMQGF 267
+ P+I
Sbjct: 238 TTANPEIFQEIASIWL 253
>gi|229143571|ref|ZP_04271996.1| Glutamate racemase [Bacillus cereus BDRD-ST24]
gi|296501581|ref|YP_003663281.1| glutamate racemase [Bacillus thuringiensis BMB171]
gi|228639927|gb|EEK96332.1| Glutamate racemase [Bacillus cereus BDRD-ST24]
gi|296322633|gb|ADH05561.1| glutamate racemase [Bacillus thuringiensis BMB171]
Length = 276
Score = 236 bits (601), Expect = 4e-60, Method: Composition-based stats.
Identities = 51/255 (20%), Positives = 99/255 (38%), Gaps = 5/255 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + + L ++
Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQSFVFEMVE-FLKQF 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA EL+ P + A T+ I ++ T T++
Sbjct: 69 PLKALVVACNTAAAAALTELQEALSIPVIGVIHPGARAAIKVTKKEKIGVIGTVGTIKSN 128
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+H + +H + LA+ VE I + ++++ + + D +
Sbjct: 129 MYEKALHELDTYLEVHSHACPNLATVVENRLEDIAY----VTQQVKQALLPLTKEDIDTL 184
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYPL+ ++ V + +++ A +L + H F +G
Sbjct: 185 ILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTGS 244
Query: 256 PDIAMRRLMQGFGLK 270
+ G +
Sbjct: 245 VLSFEHIAERWLGYQ 259
>gi|88856297|ref|ZP_01130956.1| glutamate racemase [marine actinobacterium PHSC20C1]
gi|88814381|gb|EAR24244.1| glutamate racemase [marine actinobacterium PHSC20C1]
Length = 288
Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats.
Identities = 54/262 (20%), Positives = 96/262 (36%), Gaps = 12/262 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL V + + +P +YV D + PYG +++ + + L
Sbjct: 13 DAPIGVFDSGVGGLTVARAIIDQLPHESIVYVGDTLHSPYGPKPIADVRRYALEVMDR-L 71
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILST 128
L VIACNTA + + R + + V PA + A T++ + ++ T
Sbjct: 72 VDDGVKLLVIACNTASAAMLRDARERYTEAYGIEVVEVIQPATRAAVRQTRNRRVGVIGT 131
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ + + S + + VE E+ E +
Sbjct: 132 EGTIKSRAYEDAFAA-ASDIELFTQACPRFVEFVEAGVT----TGPEVLAVAEEYLAPLK 186
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-D 247
D +VL CTHYP I + + V + +++ A L + + +
Sbjct: 187 KAEIDTLVLGCTHYPHISAAIQYVMGREVTLVSSAEETAYDVYSTLVAHDLLRDPSQPAN 246
Query: 248 HALFLSG-KPDIAMRRLMQGFG 268
H +G R + G
Sbjct: 247 HTFEATGPDKHGFTRLASRFMG 268
>gi|158429235|pdb|2OHO|A Chain A, Structural Basis For Glutamate Racemase Inhibitor
gi|158429236|pdb|2OHO|B Chain B, Structural Basis For Glutamate Racemase Inhibitor
Length = 273
Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 95/256 (37%), Gaps = 8/256 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I DSG+GGL V+ ++ +P +Y+ D PYG +K+ L + L
Sbjct: 13 RPIGFLDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVN-FLL 71
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ V ACNTA + +E+++ +P A T G + ++ TP T+
Sbjct: 72 TQNVKMIVFACNTATAVAWEEVKAALDIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVA 131
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I + ++ VE + KK + GK D
Sbjct: 132 SDIYRKKIQLLAPSIQVRSLACPKFVPIVESNE----MCSSIAKKIVYDSLAPLVGK-ID 186
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHALF 251
+VL CTHYPL+ + + + V +D+ R LL + + + +H F
Sbjct: 187 TLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQKAVEHRFF 246
Query: 252 LSGKPDIAMRRLMQGF 267
+ P+I
Sbjct: 247 TTANPEIFQEIASIWL 262
>gi|30019021|ref|NP_830652.1| glutamate racemase [Bacillus cereus ATCC 14579]
gi|229126278|ref|ZP_04255296.1| Glutamate racemase [Bacillus cereus BDRD-Cer4]
gi|29894563|gb|AAP07853.1| Glutamate racemase [Bacillus cereus ATCC 14579]
gi|228657270|gb|EEL13090.1| Glutamate racemase [Bacillus cereus BDRD-Cer4]
Length = 276
Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats.
Identities = 51/255 (20%), Positives = 99/255 (38%), Gaps = 5/255 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + + L ++
Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQSFVFEMVE-FLKQF 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA EL+ P + A T+ G I ++ T T++
Sbjct: 69 PLKALVVACNTAAAAALTELQEALSIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIKSN 128
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+H + +H + LA+ VE + ++++ + + D +
Sbjct: 129 MYEKALHELDTYLEVHSYACPTLATVVENQLE----DTAYVTQQVKQALLPLTKEDIDTL 184
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYPL+ ++ V + +++ A +L + H F +G
Sbjct: 185 ILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTGS 244
Query: 256 PDIAMRRLMQGFGLK 270
+ G +
Sbjct: 245 VLSFEHIAERWLGYQ 259
>gi|255321272|ref|ZP_05362438.1| glutamate racemase [Acinetobacter radioresistens SK82]
gi|255301826|gb|EET81077.1| glutamate racemase [Acinetobacter radioresistens SK82]
Length = 276
Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats.
Identities = 64/261 (24%), Positives = 117/261 (44%), Gaps = 11/261 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSGIGGL V Q++ +P +Y AD PYG D +++ L
Sbjct: 7 DAPIGIFDSGIGGLSVAQEIARHLPHEQILYYADTAHVPYGPRSDQNIRELTAQAIE-WL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ +V+ACNTA D LR + S +G VPA+K A +++ ++++L+TPAT
Sbjct: 66 YRQGCKAAVVACNTASAFSLDYLRKHYGESFPIIGLVPALKPAVLQSKTKVVAVLATPAT 125
Query: 132 LRRTYTSNLIHSYVS--QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
R ++I + + ++ + L VE+ + + +KK ++
Sbjct: 126 FRGNLIKDVIERFAMPTGVKVLPITCLELVPLVEQGLQMSQQCLNTLKKILQ----PVVE 181
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH---QTRVFD 246
+ D +VL CTHYP + + + + +D+ ++AR+ +L +
Sbjct: 182 QGADHLVLGCTHYPFLKPAIQAIFGQQLTLVDSGQAVARQTARILIKNELLGEQTCESET 241
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
++SG ++ ++Q
Sbjct: 242 RIQCYVSGHNAENLKPILQHL 262
>gi|19745519|ref|NP_606655.1| glutamate racemase [Streptococcus pyogenes MGAS8232]
gi|139474362|ref|YP_001129078.1| glutamate racemase [Streptococcus pyogenes str. Manfredo]
gi|24418567|sp|Q8P2D3|MURI_STRP8 RecName: Full=Glutamate racemase
gi|166231061|sp|A2RG97|MURI_STRPG RecName: Full=Glutamate racemase
gi|19747638|gb|AAL97154.1| putative glutamate racemase [Streptococcus pyogenes MGAS8232]
gi|134272609|emb|CAM30876.1| glutamate racemase [Streptococcus pyogenes str. Manfredo]
Length = 264
Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 95/256 (37%), Gaps = 8/256 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I DSG+GGL V+ ++ +P +Y+ D PYG +K+ L + L
Sbjct: 4 RPIGFLDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVN-FLL 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ V ACNTA + +E+++ +P A T G + ++ TP T+
Sbjct: 63 TQNVKMIVFACNTATAVAWEEVKAALDIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I + ++ VE + KK + GK D
Sbjct: 123 SDIYRKKIQLLAPSVQVRSLACPKFVPIVESNE----MCSSIAKKIVYDSLSPLVGK-ID 177
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHALF 251
+VL CTHYPL+ + + + V +D+ R LL + + + +H F
Sbjct: 178 TLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQKAVEHRFF 237
Query: 252 LSGKPDIAMRRLMQGF 267
+ P+I
Sbjct: 238 TTANPEIFQEIASIWL 253
>gi|209549543|ref|YP_002281460.1| glutamate racemase [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209535299|gb|ACI55234.1| glutamate racemase [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 266
Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats.
Identities = 143/258 (55%), Positives = 187/258 (72%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
IL+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK+R++ LF+ +L
Sbjct: 9 KPILLFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEQALKERVIGLFAKLLA 68
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
Y P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T+R
Sbjct: 69 DYDPEVCIIACNTAFTLVGADLRAAFPQMIFVGTVPAIKPAAERTRSGLVSVLATPGTVR 128
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI S+ QCH+ LV S LA E Y G + +D + EI+ CF+EK+G +TD
Sbjct: 129 RAYTRDLIQSFAQQCHVRLVGSENLARMAEAYIRGDTVSDDAVLAEIDQCFVEKDGHKTD 188
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++VLACTHYP + ++FR+L+PWPVDWLD +++IARRAR L+P D A+F S
Sbjct: 189 IVVLACTHYPFMANLFRRLAPWPVDWLDPAEAIARRARTLVPAAADAVHPDNFDFAVFTS 248
Query: 254 GKPDIAMRRLMQGFGLKS 271
G D A RRLMQGFGL++
Sbjct: 249 GHQDFATRRLMQGFGLRA 266
>gi|295100376|emb|CBK97921.1| glutamate racemase [Faecalibacterium prausnitzii L2-6]
Length = 274
Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats.
Identities = 52/258 (20%), Positives = 91/258 (35%), Gaps = 3/258 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL ++++R +P + +Y D PYG+ + + + L
Sbjct: 3 NRPIGVFDSGLGGLTGVRELRKRLPNENIVYFGDTGRVPYGSRSPETILQYARQDIA-FL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ AC T ++ + P A ++AA T++ I ++ T AT+
Sbjct: 62 LSKDVKCIMAACGTVSSIYPAAEAAKLPVPYLGVVDAAAREAAFVTRNRRIGVIGTAATI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE--DEIKKEIEGCFIEKEGK 190
R ++ V I + VE + + I E
Sbjct: 122 RSRSYETVLRKLVPGVEITAQPCPLFVPLVEAGYVDHSALDKQQVTRLVIAQYLAEVREA 181
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D ++L CTHYPLI + V +D + + A L +
Sbjct: 182 GVDTLILGCTHYPLIKEMIGWYMGRNVTLVDPAQTAAHHLERTLSERGLKGNHEKGEAHF 241
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S PD + G
Sbjct: 242 YVSDVPDSFAQTADLFLG 259
>gi|218463622|ref|ZP_03503713.1| glutamate racemase [Rhizobium etli Kim 5]
Length = 266
Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats.
Identities = 141/258 (54%), Positives = 190/258 (73%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+L+FDSGIGGL VL++ R LMPE FIYVADD GFPYG WE+ ALK+R++ LF +L+
Sbjct: 9 KPVLVFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEQALKERIIGLFGKLLN 68
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
Y P + +IACNTAFTL+ +LR+ FP M F+G VPAIK AA T+SGL+S+L+TP T++
Sbjct: 69 DYDPEVCIIACNTAFTLVGADLRAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVK 128
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI S+ QCH+ LV S LA E Y G + +D + EI+ CF+E++G++TD
Sbjct: 129 RAYTRDLIQSFAQQCHVRLVGSENLARMAEAYIRGDALSDDAVLAEIDQCFVERDGQKTD 188
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++VLACTHYP + ++FR+++PWPVDWLD +++IARRAR L+P I D A+F S
Sbjct: 189 IVVLACTHYPFMANLFRRIAPWPVDWLDPAEAIARRARTLVPLIADAVHPDNFDFAMFTS 248
Query: 254 GKPDIAMRRLMQGFGLKS 271
G+ D A RRLMQGFGLK+
Sbjct: 249 GQQDFATRRLMQGFGLKA 266
>gi|315443407|ref|YP_004076286.1| glutamate racemase [Mycobacterium sp. Spyr1]
gi|315261710|gb|ADT98451.1| glutamate racemase [Mycobacterium sp. Spyr1]
Length = 278
Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats.
Identities = 56/261 (21%), Positives = 104/261 (39%), Gaps = 12/261 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL V + + +P+ IYV D PYG ++ + + D L
Sbjct: 7 RPIGIFDSGVGGLTVARAVIDQLPDEDIIYVGDTGNGPYGPLTIPQIRAHALAIGDD-LA 65
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
VIACN+A + + R + + + + PA+++A A T++G I ++ T AT+
Sbjct: 66 GRGIKALVIACNSASSACLRDARERYAPIPVVEVILPAVRRAVAATRNGRIGVIGTAATI 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + V+ VE + ++ E + +
Sbjct: 126 ASGAYQDSFAA-ARDIEVFGVACPRFVDFVERGVTSGR----QVLGLAEAYLEPLQRAQV 180
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD----- 247
D +VL CTHYP++ + + V + +++ A+ +L + D
Sbjct: 181 DTLVLGCTHYPMLSGLIQLAMGDHVTLVSSAEETAKDLLRVLTERELLKPHTGDPAAPAR 240
Query: 248 HALFLSGKPDIAMRRLMQGFG 268
+G P+ + G
Sbjct: 241 RVFEATGDPEAFTALAARFLG 261
>gi|312199600|ref|YP_004019661.1| glutamate racemase [Frankia sp. EuI1c]
gi|311230936|gb|ADP83791.1| glutamate racemase [Frankia sp. EuI1c]
Length = 343
Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats.
Identities = 58/258 (22%), Positives = 99/258 (38%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL V + + +P +Y D PYG +++ + L
Sbjct: 3 DAPIGVFDSGVGGLTVARAILDQLPHEPLLYFGDTAHAPYGPRPIAEVRRLALDAMD-TL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
L VIACNTA + R + +PA ++A A T+SG + ++ T AT+
Sbjct: 62 VAEGVKLLVIACNTASAACLRDARERYDVPVVEVVLPAARRAVAATRSGRVGVIGTVATI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + + VS VE + ++ E +
Sbjct: 122 TSRAYDDAVAA-APDVTLTSVSCPAFVDFVERGTTAGR----QLLGLAEAYLAPLQEADV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFDDHAL 250
D ++L CTHYPL+ V + V + +++ A+ +L R + H
Sbjct: 177 DTLILGCTHYPLLTGVIGLVMGESVTLVSSAEETAKDTYRVLARGGLFRDPELPPPVHRF 236
Query: 251 FLSGKPDIAMRRLMQGFG 268
+G P R + G
Sbjct: 237 LATGDPRSFTRIGRRFLG 254
>gi|290579929|ref|YP_003484321.1| putative glutamate racemase [Streptococcus mutans NN2025]
gi|254996828|dbj|BAH87429.1| putative glutamate racemase [Streptococcus mutans NN2025]
Length = 264
Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats.
Identities = 56/257 (21%), Positives = 100/257 (38%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P IY+ D PYG +K L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKTYTWELVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + + V ACNTA ++ +E++ +P A T SG I I+ TP T+
Sbjct: 63 TK-KVKMIVFACNTATAVVWEEVKEKLDIPVLGVILPGSSAAIKSTISGQIGIIGTPMTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I Q + ++ VE + + + + + +
Sbjct: 122 KSNIYEQKILDLSPQMKVRSLACPKFVPIVESNKMNSSVAKKIVYESLSPLVGK-----I 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHAL 250
D +VL CTHYPL+ + + + V+ +D+ R LL + +++R H
Sbjct: 177 DTLVLGCTHYPLLRPIIQNVMGPDVELIDSGAECVRDISVLLNYFDLNRSRTSKVLHHRF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
+ +
Sbjct: 237 YTTASVASFKEIASDWL 253
>gi|326803296|ref|YP_004321114.1| glutamate racemase [Aerococcus urinae ACS-120-V-Col10a]
gi|326650395|gb|AEA00578.1| glutamate racemase [Aerococcus urinae ACS-120-V-Col10a]
Length = 273
Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats.
Identities = 52/259 (20%), Positives = 102/259 (39%), Gaps = 8/259 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I DSG+GGL V+++ +P IY+ D+ PYG + + + L
Sbjct: 1 MKRPIGFLDSGVGGLTVVKEAMRQLPNESIIYIGDNARCPYGPRPEAEINEFTQELVD-F 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + + VIACNTA + + +R P + A Y+++G I IL+T AT
Sbjct: 60 LLEQNIKMLVIACNTATAVSLERIRQRVNIPVIGVIHPGARAANRYSENGHIGILATEAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + N++ + ++ + VE + KK + + +
Sbjct: 120 INSHFYQNVLLDHNKHLILYPLVCSKFVPLVE----SGQYSSPIAKKIVAESLYDLKQTA 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD---DH 248
D ++L CTHYPL+ + ++ V +++ +L N ++ +
Sbjct: 176 IDTLILGCTHYPLLAPLIQKFMGPGVRLVNSGAETVSDVSAILDLYNLAESSWNPEAATY 235
Query: 249 ALFLSGKPDIAMRRLMQGF 267
+ +G +
Sbjct: 236 QFYTTGGVTMFKDIAKTWL 254
>gi|15674511|ref|NP_268685.1| glutamate racemase [Streptococcus pyogenes M1 GAS]
gi|71910117|ref|YP_281667.1| glutamate racemase [Streptococcus pyogenes MGAS5005]
gi|20177988|sp|Q9A1B7|MURI_STRP1 RecName: Full=Glutamate racemase
gi|158429234|pdb|2OHG|A Chain A, Structural Basis For Glutamte Racemase Inhibition
gi|158429237|pdb|2OHV|A Chain A, Structural Basis For Glutamate Racemase Inhibition
gi|13621614|gb|AAK33406.1| putative glutamate racemase [Streptococcus pyogenes M1 GAS]
gi|71852899|gb|AAZ50922.1| glutamate racemase [Streptococcus pyogenes MGAS5005]
Length = 264
Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 95/256 (37%), Gaps = 8/256 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I DSG+GGL V+ ++ +P +Y+ D PYG +K+ L + L
Sbjct: 4 RPIGFLDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVN-FLL 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ V ACNTA + +E+++ +P A T G + ++ TP T+
Sbjct: 63 TQNVKMIVFACNTATAVAWEEVKAALDIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I + ++ VE + KK + GK D
Sbjct: 123 SDIYRKKIQLLAPSIQVRSLACPKFVPIVESNE----MCSSIAKKIVYDSLAPLVGK-ID 177
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHALF 251
+VL CTHYPL+ + + + V +D+ R LL + + + +H F
Sbjct: 178 TLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQKAVEHRFF 237
Query: 252 LSGKPDIAMRRLMQGF 267
+ P+I
Sbjct: 238 TTANPEIFQEIASIWL 253
>gi|319953665|ref|YP_004164932.1| glutamate racemase [Cellulophaga algicola DSM 14237]
gi|319422325|gb|ADV49434.1| Glutamate racemase [Cellulophaga algicola DSM 14237]
Length = 259
Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats.
Identities = 62/250 (24%), Positives = 108/250 (43%), Gaps = 7/250 (2%)
Query: 12 LQ-NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ I IFDSG+GG + +++ L+P IY+AD PYG + + ++
Sbjct: 1 MNLQPIGIFDSGVGGTSIWKEIHKLLPNEDTIYLADSKNAPYGEKSADEILNLSIKN-TE 59
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L + VIACNTA T LR T+ + F+G PAIK AA ++S I +L+T
Sbjct: 60 FLLNLGCKIIVIACNTATTNAIAYLRKTY-DIPFIGIEPAIKPAALNSKSKTIGVLATKG 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TL + +Y + L +E E++ + +
Sbjct: 119 TLTSALFNTTSKNYSEGITVIDQDGEGLVPLIESGKVNGV----EVRNLLLKYLNPMIHQ 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D +VL CTHYP ++ V +++ V +D+ +++A+ + +L + + H
Sbjct: 175 GIDYLVLGCTHYPYLIPVIQEIVSDKVTIIDSGEAVAKHTKSILEKFKLSASDQLSKHQF 234
Query: 251 FLSGKPDIAM 260
+ + D
Sbjct: 235 YSNKNADELK 244
>gi|297544101|ref|YP_003676403.1| glutamate racemase [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
gi|296841876|gb|ADH60392.1| glutamate racemase [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
Length = 264
Score = 235 bits (600), Expect = 5e-60, Method: Composition-based stats.
Identities = 61/257 (23%), Positives = 107/257 (41%), Gaps = 8/257 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL VL+++ ++P +IY D PYG+ + +KK + + +
Sbjct: 4 RPIGIFDSGVGGLTVLKRLVEVLPGEDYIYFGDTKRVPYGDRSEEEIKKFAKQILNFMR- 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ + VIACNT +I +S + + F + AA YT + I +++T T+
Sbjct: 63 EQKVKAVVIACNTTCAVIN---KSEYDVVLFDVLKAGAESAALYTINKKIGVIATTRTVE 119
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I ++ + +E+ + C E + D
Sbjct: 120 SKSYEKNIKIIDKNIKVYQKACPEFVPLIEKGLYN----SPIAFETASNCLKELRERDID 175
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTHYPL++ V ++ V +D + +A + L R + + F+S
Sbjct: 176 TLVLGCTHYPLMMEVIEEIVGENVKIVDPAIKLAYDVKDYLLRRDLFNIQNIGKTKFFVS 235
Query: 254 GKPDIAMRRLMQGFGLK 270
G D ++ G K
Sbjct: 236 GDKDNFIKTAEMLLGEK 252
>gi|152967707|ref|YP_001363491.1| glutamate racemase [Kineococcus radiotolerans SRS30216]
gi|151362224|gb|ABS05227.1| glutamate racemase [Kineococcus radiotolerans SRS30216]
Length = 282
Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats.
Identities = 56/264 (21%), Positives = 96/264 (36%), Gaps = 8/264 (3%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P I IFDSG+GGL V + + +P YV D PYG +++ +
Sbjct: 3 PARPDADLPIGIFDSGVGGLTVARAVLDQLPHEAVHYVGDTAHAPYGPKPIAEVRRLALD 62
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
+ L + + VIACN+A + + R + PA+++A T++G + ++
Sbjct: 63 VLDR-LVESGVKMLVIACNSASAAMLRDARERYDVPVVEVIQPAVRRAVRATRNGRVGVI 121
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T AT+ + + + + VE E+ G
Sbjct: 122 GTRATISSRAYEDAFAA-APHLALTTAACPAFVEFVERGVTSG----PELLTAARGYLAP 176
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRV 244
D +VL CTHYPL++ V R + V + +++ A L + R
Sbjct: 177 AIAADVDTLVLGCTHYPLLMAVLRSVVGDDVTLVSSAEETAFDVYRELAARELLRPDDRP 236
Query: 245 FDDHALFLSGKPDIAMRRLMQGFG 268
H +G + G
Sbjct: 237 EPRHRFTSTGDSAAFRHLARRFLG 260
>gi|262380044|ref|ZP_06073199.1| glutamate racemase [Acinetobacter radioresistens SH164]
gi|262298238|gb|EEY86152.1| glutamate racemase [Acinetobacter radioresistens SH164]
Length = 289
Score = 235 bits (599), Expect = 6e-60, Method: Composition-based stats.
Identities = 64/261 (24%), Positives = 117/261 (44%), Gaps = 11/261 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSGIGGL V Q++ +P +Y AD PYG D +++ L
Sbjct: 20 DAPIGIFDSGIGGLSVAQEIARHLPHEQILYYADTAHVPYGPRSDQNIRELTAQAIE-WL 78
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ +V+ACNTA D LR + S +G VPA+K A +++ ++++L+TPAT
Sbjct: 79 YRQGCKAAVVACNTASAFSLDYLRKHYGESFPIIGLVPALKPAVLQSKTKVVAVLATPAT 138
Query: 132 LRRTYTSNLIHSYVS--QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
R ++I + + ++ + L VE+ + + +KK ++
Sbjct: 139 FRGNLIKDVIERFAMPTGVKVLPITCLELVPLVEQGLQMSQQCLNTLKKILQ----PVVE 194
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH---QTRVFD 246
+ D +VL CTHYP + + + + +D+ ++AR+ +L +
Sbjct: 195 QGADHLVLGCTHYPFLKPAIQAIFGQQLTLVDSGQAVARQTARILIKNELLGEQTCESET 254
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
++SG ++ ++Q
Sbjct: 255 RIQCYVSGHNAENLKPILQHL 275
>gi|134097799|ref|YP_001103460.1| glutamate racemase [Saccharopolyspora erythraea NRRL 2338]
gi|291005565|ref|ZP_06563538.1| glutamate racemase [Saccharopolyspora erythraea NRRL 2338]
gi|189030368|sp|A4F910|MURI_SACEN RecName: Full=Glutamate racemase
gi|133910422|emb|CAM00535.1| glutamate racemase [Saccharopolyspora erythraea NRRL 2338]
Length = 271
Score = 235 bits (599), Expect = 6e-60, Method: Composition-based stats.
Identities = 54/255 (21%), Positives = 100/255 (39%), Gaps = 7/255 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL V + + +P YV D PYG ++ R + + L
Sbjct: 5 PIGIFDSGVGGLTVARAIMDQLPGEALRYVGDTANAPYGPRPLADIRARTLAITD-SLVA 63
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ VIACN+A + R + +PA+++A A T++G + ++ T AT+
Sbjct: 64 EGVKMLVIACNSASAACLRDARERYDVPVVEVVLPAVRRAVATTRNGRVGVIGTQATITS 123
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + + + A VE + ++ + + D
Sbjct: 124 RAYDDAF-TAAPGVTLSTAACPRFADFVERGITSGR----QVLGLAQAYLDPLQQADVDT 178
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHALFLS 253
+VL CTHYPL+ V + V + +++ A+ +L + + H +
Sbjct: 179 LVLGCTHYPLLTGVLQLAMGDHVTLVSSAEETAKDVLRVLTEHDLLAEADGEPAHEFRAT 238
Query: 254 GKPDIAMRRLMQGFG 268
G + + + G
Sbjct: 239 GSGESFAKLARRFLG 253
>gi|74317540|ref|YP_315280.1| glutamate racemase [Thiobacillus denitrificans ATCC 25259]
gi|74057035|gb|AAZ97475.1| glutamate racemase [Thiobacillus denitrificans ATCC 25259]
Length = 265
Score = 235 bits (599), Expect = 6e-60, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 103/256 (40%), Gaps = 9/256 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I +FDSGIGGL V++ + +P + +Y D PYG + + L
Sbjct: 7 SPIGVFDSGIGGLTVVRALMERLPYENIVYFGDTARVPYGVKSVETIAHFTTQIA-QFLL 65
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L VIACNT + ++ P + L + A AA+ I ++ TP T+
Sbjct: 66 EKDVKLLVIACNTMAAVAAQVVKDLSP-VPVLDVIDAG--AASARGGKKIGVIGTPTTIN 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ IH Y IH + + VE + + + + + D
Sbjct: 123 SNAYARAIHDYAPDSRIHSQACPLFVPLVE----EGWLDNEVTRLTAQDYMKPLLAEHID 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHALFL 252
+VL CTHYPL+ + R++ V +D+++++A + +L + + ++
Sbjct: 179 TLVLGCTHYPLLKPLLREVVGDGVALVDSAEAMAEQVAAVLAEKSLANPGPAQPRYDFYV 238
Query: 253 SGKPDIAMRRLMQGFG 268
+ P + G
Sbjct: 239 TDVPLRFQTIGERFLG 254
>gi|91774979|ref|YP_544735.1| glutamate racemase [Methylobacillus flagellatus KT]
gi|91708966|gb|ABE48894.1| glutamate racemase [Methylobacillus flagellatus KT]
Length = 270
Score = 235 bits (599), Expect = 6e-60, Method: Composition-based stats.
Identities = 65/255 (25%), Positives = 112/255 (43%), Gaps = 7/255 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ +I +FDSG+GGL VL+ ++ +P H +YVAD + PYG + +R +
Sbjct: 8 SMTPAIGVFDSGVGGLSVLRHIQQQLPHEHLLYVADSLNAPYGPKPQAFIIERSRNIA-Q 66
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L + V+ACNTA LR+ + +G PA+K AAA T+SG++ +L+T
Sbjct: 67 FLIESGAKAIVVACNTATAAAIRILRNEL-DIPVIGMEPAVKPAAAATRSGVVGVLATTG 125
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TL+ + L+ Y + + + L +E + + + G +
Sbjct: 126 TLKSAQFAALLEHYGKHIKVVAQACVGLVECIERGE----LDTPSTRALVAGYVAPLMEE 181
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHA 249
D IVL CTHYP I + ++ V +D ++AR+ L +R
Sbjct: 182 GADTIVLGCTHYPFIKPLIADIAGPDVVLIDTGAAVARQVGHRLEEAGLLTASRAPGSVK 241
Query: 250 LFLSGKPDIAMRRLM 264
+ + A + +
Sbjct: 242 AWTNSAAGNAQQLIR 256
>gi|257056887|ref|YP_003134719.1| glutamate racemase [Saccharomonospora viridis DSM 43017]
gi|256586759|gb|ACU97892.1| glutamate racemase [Saccharomonospora viridis DSM 43017]
Length = 265
Score = 234 bits (598), Expect = 7e-60, Method: Composition-based stats.
Identities = 58/256 (22%), Positives = 104/256 (40%), Gaps = 8/256 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL V + + +P YV D + PYG +++ + L
Sbjct: 10 PIGIFDSGVGGLTVARAVADQLPAERLRYVGDTLHAPYGPLPIARVRELALRALD-GLVA 68
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
VIACNTA + R + F +PA ++A A T++G + ++ T T+R
Sbjct: 69 DGVKALVIACNTASAACLRDARERYDIPVFEVVLPAARRAVATTRNGHVGLIGTEGTVRS 128
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + + + V+ VE + +I +G D
Sbjct: 129 RAYDDALA--ATGVRLSSVACPRFVEFVERGVTSGR----QILGLAQGYLEPLTRADVDT 182
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALFLS 253
++L CTHYPL+ V + + V + +++ A+ +L ++ R +H +
Sbjct: 183 LILGCTHYPLLTGVLQTVMGPDVTLVSSAEETAKDVVRVLTELDLLADRDEPPEHEFIAT 242
Query: 254 GKPDIAMRRLMQGFGL 269
G + + + GL
Sbjct: 243 GPAEPFTKLARRFMGL 258
>gi|187929182|ref|YP_001899669.1| glutamate racemase [Ralstonia pickettii 12J]
gi|229486249|sp|B2U6V5|MURI_RALPJ RecName: Full=Glutamate racemase
gi|187726072|gb|ACD27237.1| glutamate racemase [Ralstonia pickettii 12J]
Length = 282
Score = 234 bits (598), Expect = 7e-60, Method: Composition-based stats.
Identities = 58/258 (22%), Positives = 100/258 (38%), Gaps = 6/258 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + R + +
Sbjct: 4 RAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKSPEYIADRTLRVCE- 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L VIACNTA LR ++ +G P +K A A ++S ++ +L+T +
Sbjct: 63 WLVDQGCKALVIACNTATAQAVHVLREKL-AVPVIGVEPGLKPAVATSKSRVVGVLATES 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TLR + L+ C + L +E + + +
Sbjct: 122 TLRSEKFARLLAGASGDCKVLSQPGYGLVPLIERGDT----HSPAVLELLRAYLQPMLDA 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D +VL CTHYP + +++ + +D ++AR L +
Sbjct: 178 NADTLVLGCTHYPFLEDAIHEIAGDRLTLIDTGHAVARHLGRTLAAAGLQASGQAATPCF 237
Query: 251 FLSGKPDIAMRRLMQGFG 268
+G + G
Sbjct: 238 MSTGDVLPLQAMVAALLG 255
>gi|308177066|ref|YP_003916472.1| glutamate racemase [Arthrobacter arilaitensis Re117]
gi|307744529|emb|CBT75501.1| glutamate racemase [Arthrobacter arilaitensis Re117]
Length = 307
Score = 234 bits (598), Expect = 7e-60, Method: Composition-based stats.
Identities = 60/263 (22%), Positives = 104/263 (39%), Gaps = 11/263 (4%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ I IFDSG+GGL V + + +P +YV D PYG ++ + + +
Sbjct: 14 EANTPIGIFDSGVGGLTVARAIIDQLPGESLVYVGDTANSPYGPLPIAQVRANALGVMDE 73
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISIL 126
L L VIACN+A + + R + + + V PA+++A A T++G I I+
Sbjct: 74 -LVDGGVKLLVIACNSASAAVLRDARERYTARYGIPVVEVIQPAVRRAVAGTKNGKIGII 132
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T AT+ + + + V+ VE E+ + +
Sbjct: 133 GTQATVGSRAYEDAFAA-APNLQVSTVACPRFVEFVESGITAG----AELLEIAQEYLAP 187
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVF 245
+ + D +VL CTHYPL+ V + V + +++ A+ L R +
Sbjct: 188 LQAAQVDTLVLGCTHYPLLTGVISYVMGDSVTLVSSAEETAKDVFRALTRHSLVRNDGAA 247
Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268
H +G D + G
Sbjct: 248 ARHEFLATGNADSFGVLARRFLG 270
>gi|294670141|ref|ZP_06735066.1| glutamate racemase [Neisseria elongata subsp. glycolytica ATCC
29315]
gi|291308068|gb|EFE49311.1| glutamate racemase [Neisseria elongata subsp. glycolytica ATCC
29315]
Length = 270
Score = 234 bits (598), Expect = 7e-60, Method: Composition-based stats.
Identities = 54/265 (20%), Positives = 102/265 (38%), Gaps = 9/265 (3%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
Q I +FDSG+GGL ++ + +P + +Y D PYG ++ +
Sbjct: 2 NTPNQRPIGVFDSGVGGLTNVRALMERLPLENIVYFGDTARVPYGVKSRATIETFTAQIV 61
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILS 127
+L ++ VIACNT + ++R +M L + A + A A T++ I +++
Sbjct: 62 GFML-EHDVKALVIACNTIAAVAGHKVRQMAGNMPVLDVISAGAQAALATTRNNHIGVIA 120
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+ + IH + + + VE + + +
Sbjct: 121 TNTTVNSNAYAREIHRRNPAARVQSQACPLFVPLVE----EGWLDHEVTRLTAREYLKPL 176
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV--F 245
+ D +VL CTHYPL+ + +Q +P + +D++ + A L
Sbjct: 177 LAEDVDTLVLGCTHYPLLKPLLQQEAPQ-LQLVDSALTTAEAVAQALQAEGLLNDGTGQT 235
Query: 246 DDHALFLSGKPDIAMRRLMQGFGLK 270
D+ ++S P + G
Sbjct: 236 ADYRFYVSDIPLRFQTIGERFLGRS 260
>gi|269128064|ref|YP_003301434.1| glutamate racemase [Thermomonospora curvata DSM 43183]
gi|268313022|gb|ACY99396.1| glutamate racemase [Thermomonospora curvata DSM 43183]
Length = 270
Score = 234 bits (598), Expect = 8e-60, Method: Composition-based stats.
Identities = 54/258 (20%), Positives = 97/258 (37%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG GGL V + + +P+ +Y+ D PYG ++ + + L
Sbjct: 3 DAPIGIFDSGYGGLTVARAILDQLPDEPILYLGDSARQPYGPRPIAEVRAFALQMLDQ-L 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACN+A + + R + PA ++AA T +G + +++T AT+
Sbjct: 62 VAEGVKMLVIACNSASAAMLRDARERYDVPIVEVIKPATRRAARATTNGRVGLIATHATV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + V+ VE E+
Sbjct: 122 TSRAYEDAFAA-APHIELTSVACPRFVEFVEAGITKG----PELLSVARSYLQPIVDAGC 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFDDHAL 250
D ++L CTHYPL++ + V + +++ A+ +L + T H
Sbjct: 177 DTLILGCTHYPLLIGAISYVVGDGVTLVSSAEETAKDVYRVLQDQGLARAETASPPVHRF 236
Query: 251 FLSGKPDIAMRRLMQGFG 268
++G P R + G
Sbjct: 237 LVTGDPAEFARLGRRFLG 254
>gi|206577595|ref|YP_002241172.1| glutamate racemase [Klebsiella pneumoniae 342]
gi|288937809|ref|YP_003441868.1| glutamate racemase [Klebsiella variicola At-22]
gi|290513035|ref|ZP_06552398.1| glutamate racemase [Klebsiella sp. 1_1_55]
gi|226707588|sp|B5XZ09|MURI_KLEP3 RecName: Full=Glutamate racemase
gi|206566653|gb|ACI08429.1| glutamate racemase [Klebsiella pneumoniae 342]
gi|288892518|gb|ADC60836.1| glutamate racemase [Klebsiella variicola At-22]
gi|289774417|gb|EFD82422.1| glutamate racemase [Klebsiella sp. 1_1_55]
Length = 283
Score = 234 bits (598), Expect = 8e-60, Method: Composition-based stats.
Identities = 80/261 (30%), Positives = 141/261 (54%), Gaps = 6/261 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++L+FDSG+GGL V ++R L+P H+IY D+V FPYG + + +R++ + + +
Sbjct: 21 RPTVLVFDSGVGGLSVYNEIRQLLPNLHYIYAFDNVAFPYGEKSEEFIVERVVEIVTAVQ 80
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+Y L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T T+
Sbjct: 81 QRYPLALAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGIVGLLATRGTV 139
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT LI + ++C I ++ S L E G + +E+++ + +E
Sbjct: 140 KRPYTRELIDRFANECRIEMLGSAELVELAEAKLHGEPVPLEELRRILRPWLRMQEPP-- 197
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF- 251
D +VL CTH+PL+ +++ P +D+ +IARR LL ++ A
Sbjct: 198 DTVVLGCTHFPLLQEELQRVLPEGTRLIDSGAAIARRTAWLLEHEAPDAKSSDENKAFCM 257
Query: 252 -LSGKPDIAMRRLMQGFGLKS 271
L+ + + + ++ +G +
Sbjct: 258 ALTAETEQLL-PVLHRYGFPT 277
>gi|269955858|ref|YP_003325647.1| glutamate racemase [Xylanimonas cellulosilytica DSM 15894]
gi|269304539|gb|ACZ30089.1| glutamate racemase [Xylanimonas cellulosilytica DSM 15894]
Length = 268
Score = 234 bits (598), Expect = 8e-60, Method: Composition-based stats.
Identities = 57/263 (21%), Positives = 95/263 (36%), Gaps = 12/263 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I +FDSG+GGL V + + +P +Y+ D PYG A++ + + D
Sbjct: 2 NDAPIGVFDSGVGGLTVARAILDQLPHEQVLYIGDTANAPYGPKPLAAVRAMALAVMDD- 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILS 127
L L VIACN+A + + R + + V PA ++A ++SG I ++
Sbjct: 61 LVDQGVKLLVIACNSATAVALPDARERYEVRRGIPVVEVIRPAARRAVVTSRSGRIGVIG 120
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT+ + H I + VE EI
Sbjct: 121 TKATIDSRAYEDAFHVT-PGLIITTQACPEFVPLVERGITSG----PEILAAAHRYLDPV 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245
D +VL CTHYPL+ + V + +++ A+ L ++
Sbjct: 176 RDAGVDTLVLGCTHYPLLAGAISYVMGEDVTLVSSAEETAKDVYRTLVASGLERSPQAGP 235
Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268
+H +G + G
Sbjct: 236 PEHRFVSTGDTAAFEEVARRFLG 258
>gi|239917359|ref|YP_002956917.1| glutamate racemase [Micrococcus luteus NCTC 2665]
gi|281414158|ref|ZP_06245900.1| glutamate racemase [Micrococcus luteus NCTC 2665]
gi|239838566|gb|ACS30363.1| glutamate racemase [Micrococcus luteus NCTC 2665]
Length = 310
Score = 234 bits (598), Expect = 8e-60, Method: Composition-based stats.
Identities = 57/264 (21%), Positives = 95/264 (35%), Gaps = 16/264 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GGL V + + +P +YV D PYG ++ + + + L
Sbjct: 13 PIGVFDSGVGGLTVARAIMDQLPHESILYVGDTEHSPYGPRPIAEVRALALAIMDE-LVA 71
Query: 75 YQPVLSVIACNTAFTLIKDELRST----FPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
VIACN+A + + R PA+++A A T++G I ++ T A
Sbjct: 72 RGVKALVIACNSASAAVLRDARERYTGGHGIPVIEVIQPAVRRAVAATRTGRIGVIGTEA 131
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + + I V+ VE E+ +
Sbjct: 132 TVGSRAYEDSFSA-APHLAITSVACPRFVEFVEAGIT----TGPELLETAREYTAPLRAA 186
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--- 247
D +VL CTHYPL+ + V + +++ A+ L R+
Sbjct: 187 GVDTLVLGCTHYPLLTGALSLVMGEDVTLVSSAEETAKDLYRELVRLGLEHPHSAAGSGQ 246
Query: 248 ---HALFLSGKPDIAMRRLMQGFG 268
H +G PD + G
Sbjct: 247 ATRHRFAATGDPDHFQALARRFLG 270
>gi|239629726|ref|ZP_04672757.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|239528412|gb|EEQ67413.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
paracasei 8700:2]
Length = 578
Score = 234 bits (598), Expect = 8e-60, Method: Composition-based stats.
Identities = 51/257 (19%), Positives = 99/257 (38%), Gaps = 6/257 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I DSG+GGL V+++ +P +Y+ D PYG ++ + + +
Sbjct: 96 NKQPIGFIDSGVGGLTVVKEALHQLPAESSVYLGDQARLPYGPRPAEQVQAFTWQMVNFL 155
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K+ + VIACNTA +++ P + A TQ+G I I++T T
Sbjct: 156 LKKH-IKMLVIACNTATAAALPLIKANLDIPVIGVIKPGSRAALKATQTGHIGIIATEGT 214
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + + + I +++ S VE K+ + +
Sbjct: 215 VKSGAYVKALRAKAPKIRITSLAAPKFVSLVESNEA----HSPIAKRVVADTLQPLLHED 270
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHAL 250
D ++L CTHYP++ + + + V +D+ LL + + + H
Sbjct: 271 IDTLILGCTHYPILRPLIQNVMGDQVTLIDSGAETVNDVSMLLDYFDLANNSGDTPTHEY 330
Query: 251 FLSGKPDIAMRRLMQGF 267
+ +G P +
Sbjct: 331 YTTGAPSMFDELGEAWL 347
>gi|225017223|ref|ZP_03706415.1| hypothetical protein CLOSTMETH_01149 [Clostridium methylpentosum
DSM 5476]
gi|224949998|gb|EEG31207.1| hypothetical protein CLOSTMETH_01149 [Clostridium methylpentosum
DSM 5476]
Length = 268
Score = 234 bits (598), Expect = 8e-60, Method: Composition-based stats.
Identities = 58/258 (22%), Positives = 107/258 (41%), Gaps = 4/258 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++I IFDSG+GGL V+++++ ++P + +Y D PYG + S
Sbjct: 2 NNSAIGIFDSGVGGLTVVKELKRILPHENLVYFGDTGRVPYGTRSRQTIIDYAKQDLS-F 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + +++ AC T ++ +E+ P +PA++ A + T SG I +L T AT
Sbjct: 61 LKSKEIKMAIAACGTVSAVLPNEIIDELPFPYTGVLLPAVQTACSKTISGHIGVLGTSAT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R I + + I + + VE ++ + + + G
Sbjct: 121 IRSGAYGKAIRTILPNARITGIPCPLFVPLVENGY--VQRDNQVTRLVAQDYLKQVLGSD 178
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHAL 250
D ++L CTH+PL+ + + V +D AR A +L T+ ++
Sbjct: 179 IDTLILGCTHFPLLKAIIGDIVGPDVRLIDPGRETARFAASVLTSEGLLNTQEERGSYSF 238
Query: 251 FLSGKPDIAMRRLMQGFG 268
F+S P+ G
Sbjct: 239 FVSDSPESFTESANLFLG 256
>gi|319957379|ref|YP_004168642.1| glutamate racemase [Nitratifractor salsuginis DSM 16511]
gi|319419783|gb|ADV46893.1| glutamate racemase [Nitratifractor salsuginis DSM 16511]
Length = 278
Score = 234 bits (598), Expect = 8e-60, Method: Composition-based stats.
Identities = 70/256 (27%), Positives = 114/256 (44%), Gaps = 9/256 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL VL+ + +P +Y+AD PYG ++ + + + ++
Sbjct: 15 IGIFDSGLGGLTVLRPIMQALPGAEILYLADTAHAPYGEKSREEIRSYSLGIAEYFIREH 74
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA + LR FP + +G P IK A ++S + IL+TPATL
Sbjct: 75 DVDALVVACNTATSAAIATLRERFPDLPIVGTEPGIKPAVRASRSAKVGILATPATLAGE 134
Query: 136 YTSNLIHSYVSQCHI--HLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
L ++ + + L R+E ++ E ++ +EG D
Sbjct: 135 KYQALAERLCTEHEVQLFEQACPGLVERIERGE----VESPECRRMLEGWLAPMREAGVD 190
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
IVL CTHYPL R++ PV ++ ++IARR LL ++ L+ +
Sbjct: 191 TIVLGCTHYPLAASAIREVMGTPVTLIETGEAIARRLLSLLGECE-SKSNGEPVLKLYAT 249
Query: 254 G--KPDIAMRRLMQGF 267
G + L + +
Sbjct: 250 GPIDTEAVEHILGRSY 265
>gi|300775208|ref|ZP_07085070.1| glutamate racemase [Chryseobacterium gleum ATCC 35910]
gi|300505948|gb|EFK37084.1| glutamate racemase [Chryseobacterium gleum ATCC 35910]
Length = 276
Score = 234 bits (598), Expect = 8e-60, Method: Composition-based stats.
Identities = 55/258 (21%), Positives = 109/258 (42%), Gaps = 7/258 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V ++++ L+P IY D PYG A+ + + ++ L
Sbjct: 14 SQPIGIFDSGVGGLTVAKEIKRLLPNEDLIYFGDTKHLPYGEKSREAIIEYSTKI-TNFL 72
Query: 73 DKYQPVLSVIACNTAFTLIKDE-LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ VIACNTA +E ++S + + + + + +Y + +++T AT
Sbjct: 73 LEQNCKAIVIACNTATANALNEVMQSVAGRVPVIDVINPVAEKVSYEIHNNVGVIATKAT 132
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ I + + +++ +L +EE I I + K
Sbjct: 133 VNSGLYKKSIRKHNKWIKVDELATPLLVPAIEEGFKNHPIT----HAIIYNYLSNSKLKN 188
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHAL 250
+ ++L CTHYPL++ +Q V +D+ + +A + ++ + + ++
Sbjct: 189 IETLILGCTHYPLLIDEIKQYYGNRVRVIDSPNIVANHLKIIMDKYHLLNENNPKPNYHF 248
Query: 251 FLSGKPDIAMRRLMQGFG 268
+LS + + FG
Sbjct: 249 YLSDLTKNFEKISKKFFG 266
>gi|332704699|ref|ZP_08424787.1| Glutamate racemase [Desulfovibrio africanus str. Walvis Bay]
gi|332554848|gb|EGJ51892.1| Glutamate racemase [Desulfovibrio africanus str. Walvis Bay]
Length = 282
Score = 234 bits (598), Expect = 9e-60, Method: Composition-based stats.
Identities = 63/266 (23%), Positives = 110/266 (41%), Gaps = 6/266 (2%)
Query: 7 PCEKKLQN-SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
P I +FDSG+GGL VL+ +R L+P F Y+ D PYG ++ + +
Sbjct: 4 PMNTINNRLPIGVFDSGVGGLTVLRALRELLPGEDFRYLGDTARLPYGTKSRESVVRYAL 63
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLIS 124
S L L V+ACNTA +L +P + +G V P + A +G I+
Sbjct: 64 Q-SSRHLVAQGVKLLVVACNTATAAALPDLAEAYPGIPVVGVVRPGARAGCALNTNGRIA 122
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+++T +T++ I I + + + EE + E +K+ ++ F
Sbjct: 123 VMATESTVQGGAYQAAIRELCPNMRIEAAACSLFVALAEEGWTEGPLVEGIVKRYLDPLF 182
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT---HQ 241
E + +VL CTH+P++ +++ V +D++ + A+ R LL R
Sbjct: 183 ARFEDQPPTSLVLGCTHFPMLAGAIAKVAGEGVTVIDSAVTTAQEVRELLVRHGLGHPEP 242
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
R F + + R
Sbjct: 243 DRPDAKTYFFATDGRERFARVGSIFL 268
>gi|271502433|ref|YP_003335459.1| glutamate racemase [Dickeya dadantii Ech586]
gi|270345988|gb|ACZ78753.1| glutamate racemase [Dickeya dadantii Ech586]
Length = 290
Score = 234 bits (598), Expect = 9e-60, Method: Composition-based stats.
Identities = 83/264 (31%), Positives = 143/264 (54%), Gaps = 4/264 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ + ++L+FDSG+GGL V ++R L+P+ H+IY D+ FPYG + + +R++ +
Sbjct: 19 DLPNRPTVLVFDSGVGGLSVYDEVRKLLPDLHYIYAFDNEAFPYGEKPEQFIIERVLSIV 78
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ ++ L +IACNTA T+ LR+ F +G VPA+K AA T++G++ +L+T
Sbjct: 79 EAVEKQHPLSLVIIACNTASTISLPALRTRF-DFPVVGVVPAVKPAAKLTRNGVVGLLAT 137
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++R+YT LI + C I L+ S L E G + ED ++K + K
Sbjct: 138 RATVQRSYTHELISRFAHDCQILLLGSAELVEFAEAKLQGESVSEDVLRKILRPWL--KL 195
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
+ D +VL CTH+PL+ + + P +D+ +IARR L+ ++ + +
Sbjct: 196 PEPPDTVVLGCTHFPLLTEELQHVLPDGTRLVDSGSAIARRTAWLIEHLDNPKCSTEKNL 255
Query: 249 ALFLSGKPD-IAMRRLMQGFGLKS 271
A LS P A+ +++ +G S
Sbjct: 256 AYCLSITPKVAALWPVLRRYGFHS 279
>gi|15676369|ref|NP_273505.1| glutamate racemase [Neisseria meningitidis MC58]
gi|218768777|ref|YP_002343289.1| glutamate racemase [Neisseria meningitidis Z2491]
gi|60392794|sp|P0A0Q9|MURI_NEIMA RecName: Full=Glutamate racemase
gi|60392795|sp|P0A0R0|MURI_NEIMB RecName: Full=Glutamate racemase
gi|6274531|gb|AAF06679.1|AF163663_4 putative glutamate racemase MurI [Neisseria meningitidis]
gi|7225684|gb|AAF40895.1| glutamate racemase [Neisseria meningitidis MC58]
gi|121052785|emb|CAM09131.1| glutamate racemase [Neisseria meningitidis Z2491]
gi|254672785|emb|CBA06865.1| Glutamate racemase [Neisseria meningitidis alpha275]
gi|316985801|gb|EFV64744.1| glutamate racemase [Neisseria meningitidis H44/76]
gi|319411017|emb|CBY91415.1| glutamate racemase [Neisseria meningitidis WUE 2594]
gi|325136845|gb|EGC59443.1| glutamate racemase [Neisseria meningitidis M0579]
gi|325140970|gb|EGC63477.1| glutamate racemase [Neisseria meningitidis CU385]
gi|325199643|gb|ADY95098.1| glutamate racemase [Neisseria meningitidis H44/76]
Length = 270
Score = 234 bits (598), Expect = 9e-60, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 106/258 (41%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + L
Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVD-FL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
++ VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 66 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VE ++ + + +
Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVE----EGWLEHEVTRLTVCEYLKPLLADG 181
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 182 IDTLVLGCTHFPLLKPLIGREAG-NVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 240
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 241 YVSDIPLKFRTIGERFLG 258
>gi|222148423|ref|YP_002549380.1| glutamate racemase [Agrobacterium vitis S4]
gi|221735411|gb|ACM36374.1| glutamate racemase [Agrobacterium vitis S4]
Length = 269
Score = 234 bits (597), Expect = 9e-60, Method: Composition-based stats.
Identities = 139/257 (54%), Positives = 185/257 (71%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
IL+FDSGIGGL VL++ R LMPE FIY+ADD GFPYGNWE+ LK R++ LF+ +L
Sbjct: 9 KPILVFDSGIGGLTVLREARVLMPERGFIYIADDAGFPYGNWEEEPLKARIVSLFASLLA 68
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+Y P ++AC+TAFTL LR FP M F+G VPAIK AA ++SGLIS+L+TP T++
Sbjct: 69 QYDPEAVIVACSTAFTLAGAALREAFPGMRFIGTVPAIKPAAERSRSGLISVLATPGTVK 128
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI S+ SQC ++LV S LA E Y G ++E +K EI CFIEK+G +TD
Sbjct: 129 RAYTRDLIQSFASQCEVNLVGSQHLARLAEAYIRGESVEEAVLKAEIAPCFIEKQGAKTD 188
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++VLACTHYP + +VFR+L+PWPVDWLD +++IAR+AR L+P ++ D A+F S
Sbjct: 189 IVVLACTHYPFLANVFRKLAPWPVDWLDPAEAIARQARRLVPVVDEGAHSDDYDFAVFTS 248
Query: 254 GKPDIAMRRLMQGFGLK 270
G+P + RLMQGFGL+
Sbjct: 249 GQPVFSTHRLMQGFGLR 265
>gi|288940398|ref|YP_003442638.1| glutamate racemase [Allochromatium vinosum DSM 180]
gi|288895770|gb|ADC61606.1| glutamate racemase [Allochromatium vinosum DSM 180]
Length = 282
Score = 234 bits (597), Expect = 9e-60, Method: Composition-based stats.
Identities = 72/258 (27%), Positives = 119/258 (46%), Gaps = 8/258 (3%)
Query: 12 LQN--SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ I +FDSG+GGL VL+++R L+P +YVAD PYG+ ++ R + +
Sbjct: 1 MNPHHPIGVFDSGLGGLTVLREIRRLLPGEDLLYVADSAHAPYGDKSMAFIESRSIAITE 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+L++ V+ACNTA LR+ + ++ + PA+K A T+SG++++L+T
Sbjct: 61 FLLER-GAKAIVVACNTATGAAAKLLRTQY-NVPLIAMEPAVKPAVERTRSGVVAVLATR 118
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
TL S L+ + I L L RVE + + ++ + G
Sbjct: 119 RTLASHNFSVLLGRLETDAEILLQPCPGLVERVE----AGDLAGEGTRELLRGYLEPLLA 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+ D +VL CTHYPL+ + ++L+ V LD+ +AR+ R L
Sbjct: 175 RGADTLVLGCTHYPLLTPLIQELAGPDVLILDSGIGVARQVRRRLSEAELLAPEERTGRE 234
Query: 250 LFLSGKPDIAMRRLMQGF 267
F + P M LM
Sbjct: 235 RFWTSAPPARMHALMARL 252
>gi|226311374|ref|YP_002771268.1| glutamate racemase [Brevibacillus brevis NBRC 100599]
gi|226094322|dbj|BAH42764.1| probable glutamate racemase [Brevibacillus brevis NBRC 100599]
Length = 270
Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats.
Identities = 50/258 (19%), Positives = 103/258 (39%), Gaps = 5/258 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ +I + DSG+GGL V +++ +PE +YV D+ PYG+ ++ +
Sbjct: 1 MSRERAIAVIDSGVGGLTVAKEVMRQLPEERIVYVGDNARCPYGSKSPEEIRTYSFQMID 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ + VIACNTA ++ +E P P + A T++G I ++ T
Sbjct: 61 -YVMRTPLKALVIACNTATAVVLEEAIGDLPLPVIGVIEPGARAAVQVTKNGRIGVIGTE 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+R + ++ ++ VE + +E ++ ++
Sbjct: 120 TTIRTKAYERALLRIQPDLYVAGMACPAFVPLVESHMAN----TEEARRVVKETLAPFLH 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+ D ++L CTHYPL+ + ++ V +++++ AR + + +H
Sbjct: 176 EDLDTLILGCTHYPLLAPIISEVMGDRVRLINSAEETARELSLQIATDAERKQIERPEHL 235
Query: 250 LFLSGKPDIAMRRLMQGF 267
SG + +
Sbjct: 236 FVTSGDANKFRTIAEEWL 253
>gi|297250774|ref|ZP_06865032.2| glutamate racemase [Neisseria polysaccharea ATCC 43768]
gi|296837995|gb|EFH21933.1| glutamate racemase [Neisseria polysaccharea ATCC 43768]
Length = 327
Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 106/258 (41%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + L
Sbjct: 64 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVD-FL 122
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
++ VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 123 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 182
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VE ++ + + +
Sbjct: 183 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVE----EGWLEHEVTRLTVCEYLKPLLADG 238
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 239 IDTLVLGCTHFPLLKPLISREAG-NVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 297
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 298 YVSDIPLKFRTIGERFLG 315
>gi|154484251|ref|ZP_02026699.1| hypothetical protein EUBVEN_01963 [Eubacterium ventriosum ATCC
27560]
gi|149734728|gb|EDM50645.1| hypothetical protein EUBVEN_01963 [Eubacterium ventriosum ATCC
27560]
Length = 270
Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats.
Identities = 51/252 (20%), Positives = 95/252 (37%), Gaps = 6/252 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+I +FDSG+GGL V +++ +PE Y D PYG+ + + + L
Sbjct: 5 NAAIGVFDSGVGGLTVAREIIRQLPEESITYFGDTARVPYGSKSKDTIIRYSRQII-RFL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
V+ACNTA D + P K A T++ I I+ T T+
Sbjct: 64 KTKNVKAIVVACNTASAFALDTIEKEIDIPIIGVVKPGAKSAVESTKNKRIGIIGTEGTI 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + IHS + + + + VEE + ++ + +
Sbjct: 124 KSELYTQYIHSIDPEITVVGKACPLFVPLVEEGMLHDSVTDEV----ASRYLESMKEENI 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALF 251
D ++L CTHYPL+ ++ V+ ++ + A LL + + ++ +
Sbjct: 180 DSLILGCTHYPLLRSTVGKIMGPEVNLVNPAYETAISLDGLLRQNGIRADKDAKPEYEFY 239
Query: 252 LSGKPDIAMRRL 263
+S +
Sbjct: 240 VSDAEEKFKEFA 251
>gi|325134824|gb|EGC57460.1| glutamate racemase [Neisseria meningitidis M13399]
Length = 270
Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats.
Identities = 58/258 (22%), Positives = 107/258 (41%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + L
Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVD-FL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
++ VIACNT ++ ++R +M L + A K A + T++ I I++T T
Sbjct: 66 LEHDVKAMVIACNTIAAVVGQKIRQKTGNMPVLDVISAGAKAALSTTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VE ++ + + +
Sbjct: 126 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVE----EGWLEHEVTRLTVCEYLKPLLADG 181
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 182 IDTLVLGCTHFPLLKPLIGREAG-NVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 240
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 241 YVSDIPLKFRTIGERFLG 258
>gi|317151766|ref|YP_004119814.1| glutamate racemase [Desulfovibrio aespoeensis Aspo-2]
gi|316942017|gb|ADU61068.1| glutamate racemase [Desulfovibrio aespoeensis Aspo-2]
Length = 279
Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats.
Identities = 65/262 (24%), Positives = 110/262 (41%), Gaps = 7/262 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL VL+ +R MP +Y+ D PYG + + + ++ L
Sbjct: 6 KLPIGMFDSGVGGLTVLRALRERMPCEDVVYLGDTARLPYGTKSPQTVSRYAVQCAAE-L 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+ + L V+ACNTA + LR +P + +G V P + A T++ I +++T AT
Sbjct: 65 VRREIKLLVVACNTASAVAIGPLREAYPGIPVIGVVEPGAQAACRATRNQAIGVIATEAT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ IH+ + I + + EE + E + + F G
Sbjct: 125 IAGGAYHRAIHAIAPEARIVGHPCQLFVALAEEGWIDGPVAEGVAARYLHPVFRPASGTE 184
Query: 192 ----TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-D 246
D +VL CTH+PL+ R + V +D++ + A L R+N +
Sbjct: 185 SPVIPDTLVLGCTHFPLLAPAIRSVLDPSVVIVDSAATTAETVYAELARLNLGRPGTGCG 244
Query: 247 DHALFLSGKPDIAMRRLMQGFG 268
D A + R + G
Sbjct: 245 DTAYLTTDDAARFARTGTRFLG 266
>gi|302877351|ref|YP_003845915.1| glutamate racemase [Gallionella capsiferriformans ES-2]
gi|302580140|gb|ADL54151.1| glutamate racemase [Gallionella capsiferriformans ES-2]
Length = 266
Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats.
Identities = 70/255 (27%), Positives = 113/255 (44%), Gaps = 6/255 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+I +FDSG+GGL VL+ +R L+P IYVAD PYG+ +++R + L + L
Sbjct: 5 SGAIGVFDSGVGGLSVLRHIRQLLPNERLIYVADSAHVPYGDKSARYIEQRSIEL-TRFL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
VIACNTA LR F S +G PA+K A A T++G++ +L+T TL
Sbjct: 64 ISQGADAIVIACNTATAAAAATLRRDF-SCPIIGMEPAVKPAVAATKNGIVGVLATIGTL 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
S L+ Y I L +VE + ++ +E +
Sbjct: 123 ESARFSALLERYAGNVTIVTQGCPGLVEQVERGDLTGPLT----RELVERYTTPLLEQGA 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP + + R ++ + +D +++AR L + + +
Sbjct: 179 DTLILGCTHYPFLAGLIRDIAGQDIQLIDTGEAVARHLLRRLQTELSDRAPTQASVQFWT 238
Query: 253 SGKPDIAMRRLMQGF 267
SG A + +
Sbjct: 239 SGDEARASTIISALW 253
>gi|313667842|ref|YP_004048126.1| glutamate racemase [Neisseria lactamica ST-640]
gi|313005304|emb|CBN86737.1| glutamate racemase [Neisseria lactamica 020-06]
gi|325202734|gb|ADY98188.1| glutamate racemase [Neisseria meningitidis M01-240149]
Length = 270
Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 106/258 (41%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + L
Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVD-FL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
++ VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 66 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VE ++ + + +
Sbjct: 126 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVE----EGWLEHEVTRLTVCEYLKPLLADG 181
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 182 IDTLVLGCTHFPLLKPLIGREAG-NVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 240
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 241 YVSDIPLKFRTIGERFLG 258
>gi|302384966|ref|YP_003820788.1| glutamate racemase [Clostridium saccharolyticum WM1]
gi|302195594|gb|ADL03165.1| glutamate racemase [Clostridium saccharolyticum WM1]
Length = 272
Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats.
Identities = 53/255 (20%), Positives = 97/255 (38%), Gaps = 8/255 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL V +++ MP+ +Y D PYG+ + + + L
Sbjct: 5 NSPIGVFDSGVGGLTVAREIMRQMPDERIVYFGDTARVPYGSKSCSTVIRFTRQII-RFL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
VIACNTA + + + A T++G I I+ T T+
Sbjct: 64 LTQDVKAIVIACNTATACALEAVEKEVEIPIVGVIHAGARTAVDSTKNGKIGIIGTEGTI 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R + ++ + +L VEE + ++ E +GK
Sbjct: 124 RSGVYTRVMKEMREDIDVTGKPCPLLVPLVEEGLLHDSVTDEI----ASRYLSELKGKYI 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH---QTRVFDDHA 249
D +VL CTHYPL+ +L V ++ + A + +L + ++ + +
Sbjct: 180 DTLVLGCTHYPLLRSTVGRLMGPEVTLVNPAYETALELKQILEGKDLLCGQESNDVEKYH 239
Query: 250 LFLSGKPDIAMRRLM 264
++S +
Sbjct: 240 FYVSDLAEKFTSFAA 254
>gi|282895562|ref|ZP_06303696.1| Glutamate racemase [Raphidiopsis brookii D9]
gi|281199402|gb|EFA74266.1| Glutamate racemase [Raphidiopsis brookii D9]
Length = 292
Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats.
Identities = 54/257 (21%), Positives = 99/257 (38%), Gaps = 7/257 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ I +FDSG+GGL VL+++ +P IY D PYG + + + + +
Sbjct: 25 KSPIGVFDSGVGGLTVLRQVYQQLPNESVIYFGDTAHLPYGIRSQKEILGYVREILNWM- 83
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + ++ACNT+ L + +R + PA K A + I +++TPAT
Sbjct: 84 EQQGVKMVIMACNTSSALTLETVRLEYKFPILGMISPATKFAVNVGK--RIGVIATPATA 141
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I + VS +E+ K +
Sbjct: 142 KSNAYRQAIMELKPNVQVWQVSCPEFVPLIEQNRLHDPYTLAVAK----SYLEPLLAQEI 197
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++ CTHYPL+ + + L P + +D + + R + L +N + +
Sbjct: 198 DTLIYGCTHYPLLEPIIKTLIPNHIHLVDPAVHVVRVCQRELEILNIKNHLLPMPTRFVV 257
Query: 253 SGKPDIAMRRLMQGFGL 269
SG P + G
Sbjct: 258 SGSPQHFSQSGTPWLGY 274
>gi|307128966|ref|YP_003880982.1| glutamate racemase [Dickeya dadantii 3937]
gi|306526495|gb|ADM96425.1| glutamate racemase [Dickeya dadantii 3937]
Length = 290
Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 82/264 (31%), Positives = 146/264 (55%), Gaps = 4/264 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ + ++L+FDSG+GGL V ++R L+P+ H+IY D+ FPYG + + +R++ +
Sbjct: 19 DLPARPTVLVFDSGVGGLSVYDEVRKLLPDLHYIYTFDNEAFPYGEKPEQFIIERVVSIV 78
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ ++ L +IACNTA T+ LR+ F + +G VPA+K AA T++G++ +L+T
Sbjct: 79 DAVEKQHPLSLVIIACNTASTISLPALRARF-NFPVVGVVPAVKPAAKLTRNGVVGLLAT 137
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++R YT LI + + C I L+ S L E G + E+ ++K ++ K
Sbjct: 138 RATVQRPYTHELISRFANDCQILLLGSAELVEWGEAKLQGETVPEEVLRKILKPWL--KL 195
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
+ D +VL CTH+PL+ +Q+ P +D+ +IARR L+ ++ + +
Sbjct: 196 PEPPDTVVLGCTHFPLLSEELQQVLPDGTRLVDSGTAIARRTAWLIEHLDNPKLSTERNL 255
Query: 249 ALFLSGKPD-IAMRRLMQGFGLKS 271
A LS P A+ +++ +G +
Sbjct: 256 AYCLSITPKVAALSPVLRRYGFSA 279
>gi|269214987|ref|ZP_05987513.2| glutamate racemase [Neisseria lactamica ATCC 23970]
gi|269208607|gb|EEZ75062.1| glutamate racemase [Neisseria lactamica ATCC 23970]
Length = 326
Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 106/258 (41%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + L
Sbjct: 63 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVD-FL 121
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
++ VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 122 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 181
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VE ++ + + +
Sbjct: 182 VNSNAYARAIHRSNPDTLVRTQAAPLLVPLVE----EGWLEHEVTRLTVCEYLKPLLADG 237
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 238 IDTLVLGCTHFPLLKPLIGREAG-NVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 296
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 297 YVSDIPLKFRTIGERFLG 314
>gi|317495245|ref|ZP_07953615.1| glutamate racemase [Gemella moribillum M424]
gi|316914667|gb|EFV36143.1| glutamate racemase [Gemella moribillum M424]
Length = 264
Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 51/257 (19%), Positives = 98/257 (38%), Gaps = 5/257 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++N+I +FDSG+GGL V +++ +P Y D PYG+ + K
Sbjct: 1 MKNAIGVFDSGVGGLTVAREIMRQLPNETIYYFGDVKNCPYGDKTKDEIIKNTEKAVE-F 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + V+ACNTA + L+ + P ++A T++ + +L T T
Sbjct: 60 LINQGVKMIVLACNTATAAALEYLQDRYNLPIIGVVQPGARRAIQATENNNVLVLGTQFT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
I + S ++ + +E + E +K ++ + +
Sbjct: 120 ADSKVYDKEIKNINSDIVVYDKACPTFCPFIE---AEGNLVEGATQKLLKDVLFDTKLLD 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHAL 250
D +VL CTHYP++ + + + + AR +L Q + +H
Sbjct: 177 IDTVVLGCTHYPILKKDIEEYYGNNIKVISSGHEAARDVSTVLGYAKLLQKKLNKTEHKF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
F+S + + +
Sbjct: 237 FISKESEHFNNIASKWL 253
>gi|269218711|ref|ZP_06162565.1| glutamate racemase [Actinomyces sp. oral taxon 848 str. F0332]
gi|269211822|gb|EEZ78162.1| glutamate racemase [Actinomyces sp. oral taxon 848 str. F0332]
Length = 275
Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 55/260 (21%), Positives = 97/260 (37%), Gaps = 11/260 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL V + + PE Y+ D PYG +++ + + L
Sbjct: 4 RPIGIFDSGVGGLTVARAIIDQFPEESITYIGDTAHTPYGPKPIAQVRELALDIMD-SLV 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTP 129
+ VIACN+A + + R + + + V PA+++A + T++ I ++ T
Sbjct: 63 DSGVKMLVIACNSASAAVLHDARERYQAARSIPVVEVIQPAVRRAVSATRNRRIGVIGTE 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ + + + + VE ++++ E
Sbjct: 123 ATIGSGAYEDAFAA-APHLTLTTAACPEFVELVEAGITAG----PQVEEVAERYLAPVRD 177
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDH 248
D +VL CTHYPL+ V + ++D AR L + D
Sbjct: 178 AGVDTLVLGCTHYPLLAGAIGYTMGESVTLVSSADETARDVYAKLASRDLFAPPGNEPDR 237
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+ +G P + G
Sbjct: 238 RFYATGDPARFGELAGRFLG 257
>gi|163840216|ref|YP_001624621.1| glutamate racemase [Renibacterium salmoninarum ATCC 33209]
gi|162953692|gb|ABY23207.1| glutamate racemase [Renibacterium salmoninarum ATCC 33209]
Length = 306
Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 59/271 (21%), Positives = 102/271 (37%), Gaps = 12/271 (4%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
++ +P + Q + IFDSG+GGL V + + +P YV D PYG ++
Sbjct: 1 MNQHPVVQ-AQAPLGIFDSGVGGLTVARSVIDQLPNESIFYVGDTANAPYGPLPIAEVRA 59
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRS----TFPSMAFLGAVPAIKQAAAYT 118
+ + + L L VIACN+A + + R PA+++A A T
Sbjct: 60 NALGVMDE-LVDSGVKLLVIACNSATAAVLPDARERYTLRHGIPVVEVIRPAVRRAVAAT 118
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
++G I ++ T AT+ + S + + VE E+
Sbjct: 119 RNGRIGVIGTEATIGSRAYEDSFAV-ASDLQVTSAACPKFVEFVELGITAG----PELLN 173
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
E + D +VL CTHYPL+ V + V + +++ A+ L +
Sbjct: 174 TAEEYLAPLKAAGVDTLVLGCTHYPLLTGVISYVMGDGVTLVSSAEETAKDVYKALIEHD 233
Query: 239 THQTRV-FDDHALFLSGKPDIAMRRLMQGFG 268
+T H +G + + G
Sbjct: 234 LERTENLPPQHRFISTGDAEGFGTLARRFLG 264
>gi|291612568|ref|YP_003522725.1| glutamate racemase [Sideroxydans lithotrophicus ES-1]
gi|291582680|gb|ADE10338.1| glutamate racemase [Sideroxydans lithotrophicus ES-1]
Length = 268
Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 73/259 (28%), Positives = 113/259 (43%), Gaps = 8/259 (3%)
Query: 12 LQNS--ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+Q + I +FDSG+GGL VLQ +R +P IYVAD PYG+ ++ R + + +
Sbjct: 1 MQPAGAIGVFDSGVGGLSVLQHIRHTLPHERLIYVADSGHVPYGDKSPAFIEARALAI-T 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L VIACNTA LR F M L PA+K A A TQS ++ +L+T
Sbjct: 60 RFLISQGAEAIVIACNTATAAAAHTLRVKFNKMPILAMEPAVKPAIAVTQSRVVGVLATV 119
Query: 130 ATLRRTYTSNLIHSYVSQC-HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
TL + L+ Y I L +VE + ++ +E
Sbjct: 120 GTLESARFAALLEKYGGWKVKIETQGCPGLVEQVERGE----LHSARTRELVERYTAPLL 175
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
K D ++L CTHYP + + R++ + +D ++AR + + +
Sbjct: 176 RKGADTLILGCTHYPFLAPLIREIVGDNITLIDTGAAVARHLQHRVKAELPPRIVGEASE 235
Query: 249 ALFLSGKPDIAMRRLMQGF 267
F SG P+ A R + +
Sbjct: 236 RFFTSGDPEQASRIMSMLW 254
>gi|282916399|ref|ZP_06324161.1| glutamate racemase [Staphylococcus aureus subsp. aureus D139]
gi|282319839|gb|EFB50187.1| glutamate racemase [Staphylococcus aureus subsp. aureus D139]
Length = 266
Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 56/260 (21%), Positives = 95/260 (36%), Gaps = 5/260 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG +K+ + +
Sbjct: 1 MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGQCPYGPRPGEQVKQYTVEIARK- 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L ++ + VIACNTA + + L+ T P + A T++ + +L T T
Sbjct: 60 LMEFDIKMLVIACNTATAVALEYLQKTLSIPVIGVIEPGARTAIMTTRNQNVLVLGTEGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ I +H V+ VE+ + I
Sbjct: 120 IKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYSDPTITSIV---IHQTLKRWRNSE 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
+D ++L CTHYPL+ + + AR LL N H + DH
Sbjct: 177 SDTVILGCTHYPLLYKPIYDYFDGKKTVISSGLETAREVSALLTFSNEHASYTEHPDHRF 236
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
F +G + + L
Sbjct: 237 FATGDTTHITNIIKEWLNLS 256
>gi|269213840|ref|ZP_05982968.2| glutamate racemase [Neisseria cinerea ATCC 14685]
gi|269145167|gb|EEZ71585.1| glutamate racemase [Neisseria cinerea ATCC 14685]
Length = 293
Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 106/258 (41%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + L
Sbjct: 30 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIEHFSMQIVD-FL 88
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
++ VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 89 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 148
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VE ++ + + +
Sbjct: 149 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVE----EGWLEHEVTRLTVCEYLKPLLADG 204
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 205 IDTLVLGCTHFPLLKPLIGREAG-NVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 263
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 264 YVSDIPLKFRTIGERFLG 281
>gi|148655659|ref|YP_001275864.1| glutamate racemase [Roseiflexus sp. RS-1]
gi|189030367|sp|A5UTG1|MURI_ROSS1 RecName: Full=Glutamate racemase
gi|148567769|gb|ABQ89914.1| glutamate racemase [Roseiflexus sp. RS-1]
Length = 272
Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 71/254 (27%), Positives = 122/254 (48%), Gaps = 7/254 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSGIGG+ VL+++R L+P + +Y+AD PYG+ L+ + ++
Sbjct: 7 RPIGLFDSGIGGMTVLREVRRLLPGENLLYLADQARCPYGSRSPDELRAIAAACAAWLIA 66
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L V+ACNTA +LR FP++ F+G VP +K AA+ T+SG++ +L+TPATL
Sbjct: 67 R-GAKLVVVACNTASAAALADLRRRFPAIPFVGMVPPVKPAASRTRSGVVGVLATPATLA 125
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
++I + H+ + L ++E + E + G D
Sbjct: 126 GDLLHDVISRWAEGVHVIEQACPGLVEQIE----EGALDSPETMALLRGYVTPLLDAGAD 181
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFDDHALF 251
IVL CTHYPL+V R ++ LD + ++A+R ++ + +
Sbjct: 182 TIVLGCTHYPLLVPQLRAIAGDDTLILDAAPAVAQRVAQIVQERGLMRNVNTLSGAITCA 241
Query: 252 LSGKPDIAMRRLMQ 265
+G P+ + +
Sbjct: 242 TTGDPERFANLIHR 255
>gi|260579687|ref|ZP_05847548.1| glutamate racemase [Corynebacterium jeikeium ATCC 43734]
gi|258602179|gb|EEW15495.1| glutamate racemase [Corynebacterium jeikeium ATCC 43734]
Length = 288
Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats.
Identities = 55/264 (20%), Positives = 110/264 (41%), Gaps = 9/264 (3%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
E+ I +FDSG+GGL V + + +P + +Y+ D PYG+ +++ + +
Sbjct: 17 VEQANNAPIGVFDSGVGGLTVARAIVDQLPHENLVYIGDTANSPYGDKPLARVRELSIGI 76
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
L + + V+ACN+A + + R + +PA+++AAA T++G I ++
Sbjct: 77 AD-TLAERGCKMIVVACNSASSAFIRDARERYSIPVVEVILPAVRRAAAATRNGKIGVIG 135
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT+ +L + + + VE + ++ E
Sbjct: 136 TQATVSSRSYQDLFAAI-PGVEAYAQACPQFVPFVERGMTSGR----QLMGLAENYLAPL 190
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD- 246
+ + D +VL CTHYPL+ V + + V +++++ A+ L +
Sbjct: 191 KAEGVDTVVLGCTHYPLLAGVVQLVMGEDVTLINSAEETAKTVYRTLAEQDLLADEDPGR 250
Query: 247 --DHALFLSGKPDIAMRRLMQGFG 268
D + +G P + + G
Sbjct: 251 AVDLSFESTGDPQRFAKLAGRFLG 274
>gi|227494818|ref|ZP_03925134.1| glutamate racemase [Actinomyces coleocanis DSM 15436]
gi|226831270|gb|EEH63653.1| glutamate racemase [Actinomyces coleocanis DSM 15436]
Length = 272
Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats.
Identities = 62/263 (23%), Positives = 103/263 (39%), Gaps = 13/263 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + +P+ +YV D PYG +++ + + + L
Sbjct: 3 NAPIGIFDSGLGGLTVARSIMDKLPQEQILYVGDTAHTPYGTKPIATVRELALNVMDE-L 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILST 128
+ VIACNTA + + R + A + V PA K A A T++ I +++T
Sbjct: 62 ASRGVKMLVIACNTASAAVLRDARERYEVDAGIPVVEVIQPASKAAVAATRNRKIGVIAT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ + + + VE+ E+ + +
Sbjct: 122 AATVTSGAYKDAFAVV-PDLEVTQQACPRFVEFVEKGIT----TGAELNEVAREYLDPVK 176
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-- 246
D +VL CTHYPL+ + Q V + +S+S A L R N + V
Sbjct: 177 TAGVDTLVLGCTHYPLLTGLISQHMGERVTLISSSESAANEVYQRLVRENLTASEVDPLQ 236
Query: 247 -DHALFLSGKPDIAMRRLMQGFG 268
H + +G + + G
Sbjct: 237 VQHEFYGTGSLESFAPLARRFLG 259
>gi|116611238|gb|ABK03962.1| glutamate racemase [Arthrobacter sp. FB24]
Length = 312
Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats.
Identities = 59/261 (22%), Positives = 102/261 (39%), Gaps = 11/261 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + +P +YV D PYG ++ + + + L
Sbjct: 3 SRPIGIFDSGVGGLTVARSIIDQLPNESILYVGDTANGPYGPLPIAEVRANALGVMDE-L 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILST 128
L IACN+A + + R + + + + PA+++A A T+SG + ++ T
Sbjct: 62 VDSGVKLLTIACNSASAAVLRDARERYTARYGIPVIEVIQPAVRRAVAATRSGRVGVIGT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ + + HI V+ S VE E+
Sbjct: 122 SATIGSRAYEDTFAA-APDLHITSVACPAFVSYVEAGIT----TGPELLAVAREYLEPLR 176
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDD 247
D +VL CTHYPL+ V + V + +++ A+ L + +T +
Sbjct: 177 TAGVDTVVLGCTHYPLLTGVISYVMGEDVTLVSSAEETAKDVYRALVSHDLQRTLEAPPE 236
Query: 248 HALFLSGKPDIAMRRLMQGFG 268
H +G+ + G
Sbjct: 237 HHFIATGEAGQFETLARRFLG 257
>gi|253686599|ref|YP_003015789.1| glutamate racemase [Pectobacterium carotovorum subsp. carotovorum
PC1]
gi|259509917|sp|C6DHQ3|MURI_PECCP RecName: Full=Glutamate racemase
gi|251753177|gb|ACT11253.1| glutamate racemase [Pectobacterium carotovorum subsp. carotovorum
PC1]
Length = 285
Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats.
Identities = 83/272 (30%), Positives = 142/272 (52%), Gaps = 4/272 (1%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
+ + P + ++L+FDSG+GGL V ++R L+P+ H+IY D+ FPYG +
Sbjct: 11 ISPEAIPSNLPSRPTVLVFDSGVGGLSVYDEIRQLLPDLHYIYAFDNEAFPYGEKSQQFI 70
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++Q L VIACNTA T+ LR F + +G VPA+K AA T++
Sbjct: 71 IERVVEIVNAVQLRHQLALVVIACNTASTISLPALRERF-TFPVVGVVPAVKPAAKLTRN 129
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
G++ +L+T AT++R YT LI + + C I + S L E G I E++K +
Sbjct: 130 GVVGLLATRATVQRPYTHELIARFATDCQILSLGSSELVELAEAKLQGETISISELQKIL 189
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ + D +VL CTH+PL+ + P +D+ +IARR L+ ++
Sbjct: 190 RPWL--RLPEPPDTVVLGCTHFPLLAEELKAALPDGTRLVDSGAAIARRTAWLIANLDNP 247
Query: 241 QTRVFDDHALFLSGKPDIA-MRRLMQGFGLKS 271
+ L+ P +A + ++Q +G S
Sbjct: 248 PLSTDKNLVYCLAITPKVATLWPILQRYGFDS 279
>gi|49475603|ref|YP_033644.1| glutamate racemase [Bartonella henselae str. Houston-1]
gi|81647897|sp|Q6G3D5|MURI_BARHE RecName: Full=Glutamate racemase
gi|49238410|emb|CAF27637.1| Glutamate racemase [Bartonella henselae str. Houston-1]
Length = 270
Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats.
Identities = 133/259 (51%), Positives = 181/259 (69%), Gaps = 1/259 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L FDSGIGGL VL+++R L+PE FIYVADDVGFPYGNWE++ LK R++ +F+++L
Sbjct: 3 ERPVLFFDSGIGGLTVLREVRSLIPEKQFIYVADDVGFPYGNWEENVLKNRILKIFTNLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Y P L VIACNT TL+ +LR FP + F+G VPAIK AA T+SG IS+L+TP T+
Sbjct: 63 TVYNPALCVIACNTVSTLMIADLRERFPHILFVGTVPAIKLAAEQTKSGFISVLATPGTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+RTYT LI+S+ QCH+ LV S LA E Y G + +E++ EI CF++K GK T
Sbjct: 123 KRTYTHELINSFAGQCHVQLVGSEKLAGFAENYLRGQSVDLEELRNEILPCFVKKNGKHT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALF 251
D+IVLACTHYP ++H FR+ + W V W+D S +IA+R R LLP+ HQT + ++D ALF
Sbjct: 183 DIIVLACTHYPFLLHFFREQALWHVQWIDPSKAIAKRTRSLLPQRIHHQTVKKYEDFALF 242
Query: 252 LSGKPDIAMRRLMQGFGLK 270
S + +RL++ F L
Sbjct: 243 TSQNITSSTKRLLKEFSLN 261
>gi|167628589|ref|YP_001679088.1| glutamate racemase, putative [Heliobacterium modesticaldum Ice1]
gi|167591329|gb|ABZ83077.1| glutamate racemase, putative [Heliobacterium modesticaldum Ice1]
Length = 284
Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats.
Identities = 63/259 (24%), Positives = 102/259 (39%), Gaps = 8/259 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL V +++ MP +Y AD PYG L + + + L
Sbjct: 5 QPIGIFDSGVGGLTVAREVFRQMPGEEILYFADTAHVPYGPRPASELIRFALEITD-FLV 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
L ++ACNT+ +L D +R P ++A +++G I +L+T AT+R
Sbjct: 64 AEGAKLILVACNTSSSLALDIIRERHKVPVVGVVDPGAEEAVRLSRNGRIGVLATEATIR 123
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ S + S + + VE DE + + D
Sbjct: 124 KGAHSRRVGELNSAMQVFGQACPRFVPLVESGRYSG----DEARAASKQYLAPLIEAGVD 179
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH---QTRVFDDHAL 250
IVL CTHYP + V R++ + +D + + + L+ R H
Sbjct: 180 TIVLGCTHYPFLEPVIREVIGEKITLIDPACQTVAQGKALMERGIIPFRDPRGPKPRHRF 239
Query: 251 FLSGKPDIAMRRLMQGFGL 269
++SG P R G+
Sbjct: 240 YVSGDPVSFARVGGALLGV 258
>gi|325963803|ref|YP_004241709.1| glutamate racemase [Arthrobacter phenanthrenivorans Sphe3]
gi|323469890|gb|ADX73575.1| glutamate racemase [Arthrobacter phenanthrenivorans Sphe3]
Length = 332
Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats.
Identities = 57/261 (21%), Positives = 101/261 (38%), Gaps = 11/261 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL V + + +P +YV D PYG ++ + + + L
Sbjct: 23 SRPIGVFDSGVGGLTVARSIIDQLPNESILYVGDTAHGPYGPLPIAEVRANALGVMDE-L 81
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILST 128
L IACN+A + + R + + + + PA+++A A T+SG + ++ T
Sbjct: 82 VDSGVKLLTIACNSASAAVLRDARERYTAKYGIPVIEVIQPAVRRAVAATRSGRVGVIGT 141
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ + + I V+ S VE + E +
Sbjct: 142 SATIGSRAYEDTFAA-APDLAITSVACPEFVSYVEAGIT----TGPALLAVAEEYLAPLK 196
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDD 247
D +VL CTHYPL+ V + V + +++ A+ L + +T +
Sbjct: 197 AAGVDTVVLGCTHYPLLTGVISYVMGADVTLVSSAEETAKDVYRALATHDLQRTDDAPPE 256
Query: 248 HALFLSGKPDIAMRRLMQGFG 268
H +G + G
Sbjct: 257 HHFVATGDAGQFEALARRFLG 277
>gi|319745525|gb|EFV97827.1| glutamate racemase [Streptococcus agalactiae ATCC 13813]
Length = 290
Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats.
Identities = 54/257 (21%), Positives = 97/257 (37%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V+++M +PE I++ D PYG +++ + + +L
Sbjct: 29 SRPIGFLDSGVGGLTVVKEMFRQLPEEEVIFIGDQARAPYGPRPAQQIREFTWQMVNFLL 88
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNTA + E++ +P A T SG + I+ TP T+
Sbjct: 89 TK-NVKMIVIACNTATAVAWQEIKEKLDIPVLGVILPGASAAIKSTNSGKVGIIGTPMTV 147
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I + + ++ VE + + + + + +
Sbjct: 148 KSDAYRQKIQALSPNTAVVSLACPKFVPIVESNQMSSSLAKKVVYETLSPLVGKL----- 202
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHAL 250
D ++L CTHYPL+ + + + V +D+ R LL + H
Sbjct: 203 DTLILGCTHYPLLRPIIQNVMGAEVKLIDSGAETVRDISVLLNYFEINHNWQNKHGGHHF 262
Query: 251 FLSGKPDIAMRRLMQGF 267
+ + P Q
Sbjct: 263 YTTASPKGFKEIAEQWL 279
>gi|284029805|ref|YP_003379736.1| glutamate racemase [Kribbella flavida DSM 17836]
gi|283809098|gb|ADB30937.1| glutamate racemase [Kribbella flavida DSM 17836]
Length = 290
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 93/258 (36%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG GGL V + + +P +Y+ D PYG +++ + L
Sbjct: 26 DAPIGIFDSGFGGLTVARAVLDQLPHEPILYLGDTARQPYGPKSIAEVREYALECLD-HL 84
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACN+A + + R + +PA ++A A T++ + ++ T +T
Sbjct: 85 VEAGVKALVIACNSASAAMLRDARERYDVPVVEVILPAARRAVAATRNQRVGVICTRSTA 144
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + Q + + VE E+
Sbjct: 145 ASLAYDDAFAA-APQVELTTQACPKFVDFVESGVTSG----PELLAAAHEYLDPLVEAGV 199
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFDDHAL 250
D ++L CTHYPL+ V + V + +++ A+ +L + + H
Sbjct: 200 DTLILGCTHYPLLTGVISYVMGDEVTLVSSAEEGAKDVYGVLTKAGLLRDNTLPEPRHRF 259
Query: 251 FLSGKPDIAMRRLMQGFG 268
+G P + G
Sbjct: 260 VTTGDPADFAAIGSRFLG 277
>gi|262041735|ref|ZP_06014926.1| glutamate racemase [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|259040922|gb|EEW42002.1| glutamate racemase [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
Length = 260
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 80/257 (31%), Positives = 139/257 (54%), Gaps = 6/257 (2%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 2 LVFDSGVGGLSVYNEIRQLLPNLHYIYAFDNVAFPYGEKSEEFIVERVVEIVTAVQQRYS 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T T++R Y
Sbjct: 62 LALAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRPY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S L E G + +E+++ + +E D +V
Sbjct: 121 TRELIDRFANECRIEMLGSAELVELAEAKLHGEPVPLEELRRILRPWLRMQEPP--DTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF--LSG 254
L CTH+PL+ +++ P +D+ +IARR LL ++ A L+
Sbjct: 179 LGCTHFPLLQEELQRVLPEGTRLIDSGAAIARRTAWLLEHEAPDAKSSDENKAFCMALTA 238
Query: 255 KPDIAMRRLMQGFGLKS 271
+ + + +++ +G +
Sbjct: 239 ETEQLL-PVLRRYGFST 254
>gi|37528551|ref|NP_931896.1| glutamate racemase [Photorhabdus luminescens subsp. laumondii TTO1]
gi|81572235|sp|Q7MYE4|MURI_PHOLL RecName: Full=Glutamate racemase
gi|36787989|emb|CAE17106.1| glutamate racemase [Photorhabdus luminescens subsp. laumondii TTO1]
Length = 287
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 90/264 (34%), Positives = 142/264 (53%), Gaps = 6/264 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K + ++L+FDSG+GGL + Q++R L+P+ H+IYV D+ FPYG + + +R++ +
Sbjct: 21 NKAARPTVLVFDSGVGGLSIYQEIRQLLPDLHYIYVFDNEAFPYGEKSEEFIVERVVQIV 80
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
I K+ + VIACNTA T+ LR F S +G VPAIK AA T++G++ +L+T
Sbjct: 81 GAIQQKHPLTIVVIACNTASTVSLPALRERF-SFPVVGVVPAIKPAAKLTRNGVVGLLAT 139
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ R+YT LI + + C I + S L E G K+ D +KK ++ K+
Sbjct: 140 RATVNRSYTKELIEKFATGCRIESIGSAELVELAEIKLHGGKVSPDILKKILKPWLGMKK 199
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
D +VL CTH+PL+ Q+ P +D+ +IARR L+ N D
Sbjct: 200 PP--DTVVLGCTHFPLLAEELVQILPDGTRLIDSGVAIARRTAWLVKHQNNLVCTSADSL 257
Query: 249 ALF--LSGKPDIAMRRLMQGFGLK 270
A ++ D A+ ++Q +G
Sbjct: 258 AYCMKVNTDTD-ALIPVLQEYGFS 280
>gi|25011689|ref|NP_736084.1| glutamate racemase [Streptococcus agalactiae NEM316]
gi|77407235|ref|ZP_00784198.1| glutamate racemase [Streptococcus agalactiae H36B]
gi|77414377|ref|ZP_00790532.1| glutamate racemase [Streptococcus agalactiae 515]
gi|29839529|sp|Q8E3V7|MURI_STRA3 RecName: Full=Glutamate racemase
gi|24413229|emb|CAD47308.1| Unknown [Streptococcus agalactiae NEM316]
gi|77159567|gb|EAO70723.1| glutamate racemase [Streptococcus agalactiae 515]
gi|77174157|gb|EAO77063.1| glutamate racemase [Streptococcus agalactiae H36B]
Length = 264
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 54/257 (21%), Positives = 97/257 (37%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V+++M +PE I++ D PYG +++ + + +L
Sbjct: 3 SRPIGFLDSGVGGLTVVKEMFRQLPEEEVIFIGDQARAPYGPRPAQQIREFTWQMVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNTA + E++ +P A T SG + I+ TP T+
Sbjct: 63 TK-NVKMIVIACNTATAVAWQEIKEKLDIPVLGVILPGASAAIKSTNSGKVGIIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I + + ++ VE + + + + + +
Sbjct: 122 KSDAYRQKIQALSPNTAVVSLACPKFVPIVESNQMSSSLAKKVVYETLSPLVGKL----- 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHAL 250
D ++L CTHYPL+ + + + V +D+ R LL + H
Sbjct: 177 DTLILGCTHYPLLRPIIQNVMGAEVKLIDSGAETVRDISVLLNYFEINHNWQNKHGGHHF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
+ + P Q
Sbjct: 237 YTTASPKGFKEIAEQWL 253
>gi|119961466|ref|YP_948293.1| glutamate racemase [Arthrobacter aurescens TC1]
gi|119948325|gb|ABM07236.1| glutamate racemase [Arthrobacter aurescens TC1]
Length = 373
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 56/260 (21%), Positives = 99/260 (38%), Gaps = 11/260 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL V + + +P +YV D PYG ++ + + + L
Sbjct: 57 RPIGIFDSGVGGLTVARSIIDQLPNESILYVGDTANGPYGPLPIAEVRANALGVMDE-LV 115
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILSTP 129
L IACN+A + + R + + + + PA+++A + T+SG I ++ T
Sbjct: 116 DSGVKLLTIACNSASAAVLRDARERYTARYGIPVIEVIQPAVRRAVSATRSGKIGVIGTS 175
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ + + I V+ + VE ++ +
Sbjct: 176 ATVGSRAYEDTFAA-APDLTITSVACPAFVNFVEAGIT----TGPDLLAAANEYLEPLKS 230
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDH 248
D +VL CTHYPL+ V + V + +++ A+ L +T H
Sbjct: 231 AGVDTVVLGCTHYPLLTGVISFVMGEDVTLVSSAEETAKDVYRALANHGIQRTEAQAPSH 290
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+G + G
Sbjct: 291 EFVATGDATQFETLARRFLG 310
>gi|152972756|ref|YP_001337902.1| glutamate racemase [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|330001329|ref|ZP_08303946.1| hypothetical protein HMPREF9538_01616 [Klebsiella sp. MS 92-3]
gi|150957605|gb|ABR79635.1| glutamate racemase [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|328537720|gb|EGF63925.1| hypothetical protein HMPREF9538_01616 [Klebsiella sp. MS 92-3]
Length = 260
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 80/257 (31%), Positives = 139/257 (54%), Gaps = 6/257 (2%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 2 LVFDSGVGGLSVYNEIRQLLPNLHYIYAFDNVAFPYGEKSEEFIVERVVEIVTAVQQRYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T T++R Y
Sbjct: 62 LALAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRPY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S L E G + +E+++ + +E D +V
Sbjct: 121 TRELIDRFANECRIEMLGSAELVELAEAKLHGEPVPLEELRRILRPWLRMQEPP--DTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF--LSG 254
L CTH+PL+ +++ P +D+ +IARR LL ++ A L+
Sbjct: 179 LGCTHFPLLQEELQRVLPEGTRLIDSGAAIARRTAWLLEHEAPDAKSSDENKAFCMALTA 238
Query: 255 KPDIAMRRLMQGFGLKS 271
+ + + +++ +G +
Sbjct: 239 ETEQLL-PVLRRYGFST 254
>gi|282901288|ref|ZP_06309214.1| Glutamate racemase [Cylindrospermopsis raciborskii CS-505]
gi|281193783|gb|EFA68754.1| Glutamate racemase [Cylindrospermopsis raciborskii CS-505]
Length = 285
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 54/256 (21%), Positives = 98/256 (38%), Gaps = 7/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I +FDSG+GGL VL+++ +P IY D PYG + + + + + +
Sbjct: 23 SPIGVFDSGVGGLTVLRQVYQQLPNESVIYFGDTAHLPYGIRSQKEILGYVREILNWM-E 81
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ + ++ACNT+ L + +R + PA K A + I +++TPAT +
Sbjct: 82 QQGVKMVIMACNTSSALTLETVRLEYKFPILGMISPATKFAVNVGK--RIGVIATPATAK 139
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I + VS +E+ K + D
Sbjct: 140 SNAYRQAIMELKVNVQVWQVSCPEFVPLIEQNRLHDPYTLAVAK----SYLEPLLAQEID 195
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++ CTHYPL+ + + L P + +D + + R + L +N + +S
Sbjct: 196 TLIYGCTHYPLLEPIIKTLIPNHIHLVDPAVHVVRVCQRELEILNIKNRLLPMPTRFVVS 255
Query: 254 GKPDIAMRRLMQGFGL 269
G P + G
Sbjct: 256 GSPQQFSQSGTPWLGY 271
>gi|256375157|ref|YP_003098817.1| glutamate racemase [Actinosynnema mirum DSM 43827]
gi|255919460|gb|ACU34971.1| glutamate racemase [Actinosynnema mirum DSM 43827]
Length = 264
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 55/255 (21%), Positives = 99/255 (38%), Gaps = 7/255 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + +P YV D PYG ++K + L L
Sbjct: 5 DAPIGIFDSGVGGLTVARAIMDQLPAERIRYVGDTANGPYGPLPIAQVRKHALDLADK-L 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA + R + +PA+++A A T+SG + ++ T +T+
Sbjct: 64 VADGVKMLVIACNTASAACLRDARERYDVPVVEVVLPAVRRAVATTRSGRVGVIGTQSTI 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + V+ VE + ++ + +
Sbjct: 124 TSGAYQDTFAA-ARDVQVTAVACPRFVDFVERGTTSGR----QVLGIAQAYLEPLQRADV 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTHYPL+ V + + V + +++ + +L + + D
Sbjct: 179 DTLVLGCTHYPLLTGVVQLVMGDGVTLVSSAEETVKDVVRVLTERDQFR-EGEPDQRFTS 237
Query: 253 SGKPDIAMRRLMQGF 267
+G + R +
Sbjct: 238 TGSVETFERLARRFL 252
>gi|94993693|ref|YP_601791.1| glutamate racemase [Streptococcus pyogenes MGAS10750]
gi|306827957|ref|ZP_07461224.1| glutamate racemase [Streptococcus pyogenes ATCC 10782]
gi|166231060|sp|Q1J8B4|MURI_STRPF RecName: Full=Glutamate racemase
gi|94547201|gb|ABF37247.1| Glutamate racemase [Streptococcus pyogenes MGAS10750]
gi|304429876|gb|EFM32918.1| glutamate racemase [Streptococcus pyogenes ATCC 10782]
Length = 264
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 55/256 (21%), Positives = 94/256 (36%), Gaps = 8/256 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I DSG+GGL V+ ++ +P +Y+ D PYG +K+ L + L
Sbjct: 4 RPIGFLDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVN-FLL 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ V ACNTA + +E+++ +P A T G + ++ TP T+
Sbjct: 63 TQNVKMIVFACNTATAVAWEEVKAALDIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I + ++ VE + KK + GK D
Sbjct: 123 SDIYRKKIQLLAPSVQVRSLACPKFVPIVESNE----MCSSIAKKIVYDSLAPLVGK-ID 177
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHALF 251
+VL CTHYPL+ + + + V +D+ R LL + + + +H F
Sbjct: 178 TLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQKAVEHRFF 237
Query: 252 LSGKPDIAMRRLMQGF 267
+ +I
Sbjct: 238 TTANSEIFQEIASIWL 253
>gi|197121115|ref|YP_002133066.1| glutamate racemase [Anaeromyxobacter sp. K]
gi|220915816|ref|YP_002491120.1| glutamate racemase [Anaeromyxobacter dehalogenans 2CP-1]
gi|196170964|gb|ACG71937.1| glutamate racemase [Anaeromyxobacter sp. K]
gi|219953670|gb|ACL64054.1| glutamate racemase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 259
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 57/257 (22%), Positives = 102/257 (39%), Gaps = 9/257 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I IFDSG+GGL V + + +P +Y+ D PYG + + + +
Sbjct: 1 MSR-IGIFDSGVGGLTVQRAILAALPSADTVYLGDTARVPYGTKSAETVTQYSLRNA-RV 58
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + + L V+ACNTA + LR+ P P + AA +++G I ++ T T
Sbjct: 59 LARREIDLLVVACNTASAVALPALRAELPVPVLGVVEPGARVAAKASRTGRIGVIGTQGT 118
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ I + + + EE ++ ++ +
Sbjct: 119 VASGAYQAAILRERPGAEVVARACPLFVPLAEEGWTD--PDDEVVRGVVRRYLDPLRDAA 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTHYPL+ + P V +D++D+IA R +P + H
Sbjct: 177 IDTLVLGCTHYPLLREAIARALPE-VRLVDSADAIAEEVRARIPAV----AGRSGVHRFL 231
Query: 252 LSGKPDIAMRRLMQGFG 268
++ P+ + + G
Sbjct: 232 VTDVPERFLGVAGRFLG 248
>gi|51891480|ref|YP_074171.1| glutamate racemase [Symbiobacterium thermophilum IAM 14863]
gi|81610699|sp|Q67SL6|MURI_SYMTH RecName: Full=Glutamate racemase
gi|51855169|dbj|BAD39327.1| glutamate racemase [Symbiobacterium thermophilum IAM 14863]
Length = 277
Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats.
Identities = 66/257 (25%), Positives = 105/257 (40%), Gaps = 7/257 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG GGL V + + L+P+ + IY D FPYG ++ +
Sbjct: 9 QRPIGLFDSGEGGLTVARAVADLLPQENLIYACDTAHFPYGPRPLAEVRAFFRRFMEFFV 68
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+ L ++ACNTA D L + + LG V P AA + +G I + +T T
Sbjct: 69 -EQNCKLVIVACNTATAAAIDLLLADAFPIPALGVVQPGAAMAAEASVTGRIGVAATQGT 127
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
I + ++ + IL R EE I E+++E+E C +R
Sbjct: 128 CDSGIYPQTIRLFRPDAYVVQQACPILVIRAEEGV----ISGPEVRREVERCLAPILAER 183
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-HAL 250
D +VL CTH+P + V + + V +D + A + LL R
Sbjct: 184 VDTLVLGCTHFPHMAKVIQDVVGPAVRLVDPGKATAVQVADLLRRRGLLNPGPGPGQRRA 243
Query: 251 FLSGKPDIAMRRLMQGF 267
F +G P + + +
Sbjct: 244 FTTGDPQRFLEVACRLW 260
>gi|116494343|ref|YP_806077.1| bifunctional glutamate racemase/xanthosine/inosine pyrophosphatase
[Lactobacillus casei ATCC 334]
gi|116104493|gb|ABJ69635.1| Glutamate racemase with xanthosine/inosine pyrophosphatase of HAM1
family [Lactobacillus casei ATCC 334]
Length = 484
Score = 233 bits (594), Expect = 3e-59, Method: Composition-based stats.
Identities = 50/257 (19%), Positives = 99/257 (38%), Gaps = 6/257 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I DSG+GGL V+++ +P +Y+ D PYG ++ + + +
Sbjct: 2 NKQPIGFIDSGVGGLTVVKEALHQLPAESSVYLGDQARLPYGPRPAEQVQAFTWQMVNFL 61
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K+ + VIACNTA +++ P + A TQ+G I I++T T
Sbjct: 62 LKKH-IKMLVIACNTATAAALPLIKANLDIPVIGVIKPGSRAALKATQTGHIGIIATEGT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + + + + +++ S VE K+ + +
Sbjct: 121 VKSGAYVKALRAKAPKIRLTSLAAPKFVSLVESNEA----HSPIAKRVVADTLQPLLHED 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHAL 250
D ++L CTHYP++ + + + V +D+ LL + + + H
Sbjct: 177 IDTLILGCTHYPILRPLIQNVMGDQVTLIDSGAETVNDVSMLLDYFDLANNSGDTPTHEY 236
Query: 251 FLSGKPDIAMRRLMQGF 267
+ +G P +
Sbjct: 237 YTTGAPSMFDELGEAWL 253
>gi|227354692|ref|ZP_03839111.1| glutamate racemase [Proteus mirabilis ATCC 29906]
gi|227165202|gb|EEI50027.1| glutamate racemase [Proteus mirabilis ATCC 29906]
Length = 288
Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats.
Identities = 83/265 (31%), Positives = 142/265 (53%), Gaps = 3/265 (1%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ ++L+FDSG+GGL + +++R +P+ H+IYV D+ FPYG + +R++ +
Sbjct: 20 AQSTANPTVLVFDSGVGGLSIYREIREKLPDAHYIYVFDNEAFPYGEKPQEFIIERVVRI 79
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
S + +++ VIACNTA T+ LR+ F + +G VPAIK AA T +G++ +L+
Sbjct: 80 VSAVAQQHELAAIVIACNTASTVSLPALRAKFTDIPIVGVVPAIKPAAKLTCNGVVGLLA 139
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT++R YT LI + ++C +HL+ S L E+ G K+ DE+++ + K
Sbjct: 140 TRATVKRPYTHELIERFATECKVHLLGSAELVELAEKKLHGEKVSCDELRRILAPWLKMK 199
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
E D +VL CTH+PL+ + P +D+ +IARR L+ + +
Sbjct: 200 EPP--DTVVLGCTHFPLLEEELLSVLPDGTRIIDSGGAIARRTAWLVVNQDKIRGSKEIS 257
Query: 248 HALFLSGKP-DIAMRRLMQGFGLKS 271
A L ++ ++ FG K+
Sbjct: 258 FAYCLKEDEYSELLKPVLADFGFKT 282
>gi|94989807|ref|YP_597907.1| glutamate racemase [Streptococcus pyogenes MGAS10270]
gi|166231059|sp|Q1JIG0|MURI_STRPD RecName: Full=Glutamate racemase
gi|94543315|gb|ABF33363.1| Glutamate racemase [Streptococcus pyogenes MGAS10270]
Length = 264
Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 96/256 (37%), Gaps = 8/256 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I DSG+GGL V+ ++ +P +Y+ D PYG +K+ L + L
Sbjct: 4 RAIGFLDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVN-FLL 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ V ACNTA + +E+++ +P A T G + ++ TP T+
Sbjct: 63 TQNVKMIVFACNTATAVAWEEVKAALDIPVLGVILPGASAAIKSTTKGQVGVIGTPMTVA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I + ++ VE + KK + GK D
Sbjct: 123 SDIYRKKIQLLAPSVQVRSLACPKFVPIVESNE----MCSSIAKKIVYDSLSPLVGK-ID 177
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHALF 251
+VL CTHYPL+ + + + V +D+ R LL + + + +H F
Sbjct: 178 TLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQKAVEHRFF 237
Query: 252 LSGKPDIAMRRLMQGF 267
+ P+I
Sbjct: 238 TTANPEIFQEIASIWL 253
>gi|227534493|ref|ZP_03964542.1| glutamate racemase [Lactobacillus paracasei subsp. paracasei ATCC
25302]
gi|227187892|gb|EEI67959.1| glutamate racemase [Lactobacillus paracasei subsp. paracasei ATCC
25302]
Length = 484
Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats.
Identities = 50/257 (19%), Positives = 99/257 (38%), Gaps = 6/257 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I DSG+GGL V+++ +P +Y+ D PYG ++ + + +
Sbjct: 2 NKQPIGFIDSGVGGLTVVKEALHQLPAESSVYLGDQARLPYGPRPAEQVQAFTWQMVNFL 61
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K+ + VIACNTA +++ P + A TQ+G I I++T T
Sbjct: 62 LKKH-IKMLVIACNTATAAALPLIKANLDIPVIGVIKPGSRAALKATQTGHIGIIATEGT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + + + + +++ S VE K+ + +
Sbjct: 121 VKSGAYVKALRAKAPKIRLTSLAAPKFVSLVESNEA----HSPIAKRVVADTLQPLLHED 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHAL 250
D ++L CTHYP++ + + + V +D+ LL + + + H
Sbjct: 177 IDTLILGCTHYPILRPLIQNVMGDQVTLIDSGAETVNDVSMLLDYFDLANNSGDTPTHEY 236
Query: 251 FLSGKPDIAMRRLMQGF 267
+ +G P +
Sbjct: 237 YTTGAPSMFDELGEAWL 253
>gi|283458299|ref|YP_003362918.1| glutamate racemase [Rothia mucilaginosa DY-18]
gi|283134333|dbj|BAI65098.1| glutamate racemase [Rothia mucilaginosa DY-18]
Length = 350
Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats.
Identities = 58/269 (21%), Positives = 102/269 (37%), Gaps = 12/269 (4%)
Query: 6 YPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
P I +FDSG+GGL V + + +P IYV D PYG + ++ +
Sbjct: 21 APVGPTAAAPIGVFDSGVGGLTVARAIMDQLPHERIIYVGDTAHGPYGPLKIAEVRANAL 80
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSG 121
+ + L + VIACNTA + + R + + + PA ++A A T++
Sbjct: 81 RIMDE-LVDSGVKMLVIACNTASAAVLRDARERYTRQYGIPVIEVIQPAARRALAATRNR 139
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I +++T AT+ + +H V+ VE+ E+ +
Sbjct: 140 KIGVIATEATVTSRAYEDTFAIT-PNLEVHSVACPRFVEFVEKGITSG----PELLETAR 194
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D +VL CTHYPL+ V + V + ++D A+ L
Sbjct: 195 EYLQPLKDAGVDTLVLGCTHYPLLAGVISYIMGEDVTLVSSADETAKDVYRELLNHAIES 254
Query: 242 --TRVFDDHALFLSGKPDIAMRRLMQGFG 268
H +G+ + + + G
Sbjct: 255 PVPEENPHHEFLATGETETFSQLARRFLG 283
>gi|290477203|ref|YP_003470120.1| glutamate racemase [Xenorhabdus bovienii SS-2004]
gi|289176553|emb|CBJ83362.1| glutamate racemase [Xenorhabdus bovienii SS-2004]
Length = 287
Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats.
Identities = 90/261 (34%), Positives = 139/261 (53%), Gaps = 4/261 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K + +ILIFDSG+GGL V Q++R L+PE H+IY D+ FPYG + +R++ +
Sbjct: 22 KTARPTILIFDSGVGGLSVYQEIRQLLPELHYIYAFDNEAFPYGEKTAEVIIERVVQVVD 81
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+I ++ + +IACNTA T+ LR F S +G VPAIK AA T + +I +L+T
Sbjct: 82 EIQKRHPLAIVIIACNTASTVSLPALRERF-SFPVVGVVPAIKPAAKLTCNRVIGLLATR 140
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ R YT LI + + C +H + S L E G KI + ++K ++ KE
Sbjct: 141 ATVNRDYTKELIARFATDCQVHSIGSAELVELAERKLHGEKIPLEILEKILKPWLRMKEP 200
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D ++L CTH+PLI Q+ P +D+ +IARR L+ N+ D+ A
Sbjct: 201 P--DTVILGCTHFPLIAEELSQVFPDGTRLIDSGAAIARRTVWLVKNQNSLFLTTADNLA 258
Query: 250 LFLS-GKPDIAMRRLMQGFGL 269
A+R +++ +G
Sbjct: 259 YCTKIDLNSEALRPVLRDYGF 279
>gi|86157092|ref|YP_463877.1| glutamate racemase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85773603|gb|ABC80440.1| glutamate racemase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 259
Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats.
Identities = 56/257 (21%), Positives = 101/257 (39%), Gaps = 9/257 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I IFDSG+GGL V + + +P +Y+ D PYG + + + +
Sbjct: 1 MSR-IGIFDSGVGGLTVQRAILAALPSADTVYLGDTARVPYGTKSAETVTQYSLRNA-RV 58
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + + L V+ACNTA + LR+ P + AA +++G I ++ T T
Sbjct: 59 LARREIDLLVVACNTASAVALPALRAELSVPVLGVVDPGARVAAKASRTGRIGVIGTQGT 118
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ I + + + EE ++ ++ + G
Sbjct: 119 VASGAYQEAIRRERPGAEVVARACPLFVPLAEEGWTD--PDDEVVRGIVRRYLDPLRGAA 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTHYPL+ + P V +D++++IA R +P H
Sbjct: 177 IDTLVLGCTHYPLLRAAIARELPE-VRLVDSAEAIAEEVRARIPA----APGRTGVHRFL 231
Query: 252 LSGKPDIAMRRLMQGFG 268
++ P+ + + G
Sbjct: 232 VTDVPERFLAVAGRFLG 248
>gi|210623229|ref|ZP_03293668.1| hypothetical protein CLOHIR_01618 [Clostridium hiranonis DSM 13275]
gi|210153766|gb|EEA84772.1| hypothetical protein CLOHIR_01618 [Clostridium hiranonis DSM 13275]
Length = 267
Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats.
Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 6/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL VL++++ ++P +Y D PYG + K + +L
Sbjct: 3 KRGIGVFDSGLGGLTVLKEIKKILPNEDLVYFGDTARVPYGPRSKETIMKYTFQAINFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K VIACNTA E + + + AAA T++G + I+ T T+
Sbjct: 63 TK-DVKAIVIACNTATARSLVEAQEKYDIPIIGVIEAGARTAAASTKNGKVGIIGTEGTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + I + ++ + + VEE + + + E E K
Sbjct: 122 KSKAYNAEIKKIDKRIKVYGKACSLFVPIVEEGWAN----TEVARLTAKEYLKELEEKDV 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALF 251
D IVL CTHYPL+ + V ++ + A + +L N T+ + F
Sbjct: 178 DSIVLGCTHYPLLKRTIGEEVGMEVKLVNPARETAIDLKNILIEKNLLNTKEELGECNYF 237
Query: 252 LSGKPDIAMRRLMQGF 267
+S + +
Sbjct: 238 VSDINEKFPSIAREFL 253
>gi|301065854|ref|YP_003787877.1| glutamate racemase with xanthosine/inosine pyrophosphatase of HAM1
family [Lactobacillus casei str. Zhang]
gi|300438261|gb|ADK18027.1| Glutamate racemase with xanthosine/inosine pyrophosphatase of HAM1
family [Lactobacillus casei str. Zhang]
Length = 484
Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats.
Identities = 50/257 (19%), Positives = 99/257 (38%), Gaps = 6/257 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I DSG+GGL V+++ +P +Y+ D PYG ++ + + +
Sbjct: 2 NKQPIGFIDSGVGGLTVVKEALHQLPAESSVYLGDQARLPYGPRPAEQVQAFTWQMVNFL 61
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K+ + VIACNTA +++ P + A TQ+G I I++T T
Sbjct: 62 LKKH-IKMLVIACNTATAAALPLIKANLDIPVIGVIKPGSRAALKATQTGHIGIIATEGT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + + + + +++ S VE K+ + +
Sbjct: 121 VKSGAYVKALRAKAPKIRLTSLAAPKFVSLVESNEA----HSPIAKRVVADTLQPLLHED 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHAL 250
D ++L CTHYP++ + + + V +D+ LL + + + H
Sbjct: 177 IDTLILGCTHYPILRPLIQNVMGDQVTLIDSGAETVNDVSMLLDYFDLANNSGDTPTHEY 236
Query: 251 FLSGKPDIAMRRLMQGF 267
+ +G P +
Sbjct: 237 YTTGAPSMFDELGEAWL 253
>gi|191637675|ref|YP_001986841.1| Glutamate racemase [Lactobacillus casei BL23]
gi|190711977|emb|CAQ65983.1| Glutamate racemase [Lactobacillus casei BL23]
gi|327381734|gb|AEA53210.1| Ribonuclease PH/Ham1 protein [Lactobacillus casei LC2W]
gi|327384898|gb|AEA56372.1| Ribonuclease PH/Ham1 protein [Lactobacillus casei BD-II]
Length = 484
Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats.
Identities = 50/257 (19%), Positives = 99/257 (38%), Gaps = 6/257 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I DSG+GGL V+++ +P +Y+ D PYG ++ + + +
Sbjct: 2 NKQPIGFIDSGVGGLTVVKEALHQLPAESSVYLGDQARLPYGPRPAEQVQAFTWQMVNFL 61
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K+ + VIACNTA +++ P + A TQ+G I I++T T
Sbjct: 62 LKKH-IKMLVIACNTATAAALPLIKANLDIPVIGVIKPGSRAALKATQTGHIGIIATEGT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + + + + +++ S VE K+ + +
Sbjct: 121 VKSGAYVKALRAKAPKIRLTSLAAPKFVSLVESNEA----HSPIAKRVVADTLQPLLHED 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHAL 250
D ++L CTHYP++ + + + V +D+ LL + + + H
Sbjct: 177 IDTLILGCTHYPILRPLIQNVMGDQVTLIDSGAETVNDVSMLLDYFDLANNSGDTPTHEY 236
Query: 251 FLSGKPDIAMRRLMQGF 267
+ +G P +
Sbjct: 237 YTTGAPSMFDELGEAWL 253
>gi|217958454|ref|YP_002337002.1| glutamate racemase [Bacillus cereus AH187]
gi|217063367|gb|ACJ77617.1| glutamate racemase [Bacillus cereus AH187]
Length = 275
Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats.
Identities = 49/255 (19%), Positives = 99/255 (38%), Gaps = 5/255 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V +++ +P+ Y+ D+ PYG ++ + + L ++
Sbjct: 10 IGVLDSGVGGLTVAREIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFVFEMVE-FLKQF 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA L+ P + A T+ G I ++ T T++
Sbjct: 69 PLKALVVACNTAAAAALTALQEALSIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIKSN 128
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+H + +H + LA+ VE + ++++ + + D +
Sbjct: 129 MYEKALHELDTYLKVHSHACPTLATVVENQLE----DTAYVTEQVKQALLPLTKEDIDTL 184
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+ CTHYPL+ ++ V + +++ A +L + +H F +G
Sbjct: 185 IPGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPEHQFFTTGS 244
Query: 256 PDIAMRRLMQGFGLK 270
+ G +
Sbjct: 245 VSSFEHIAERWLGYQ 259
>gi|228913534|ref|ZP_04077163.1| Glutamate racemase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|228846121|gb|EEM91143.1| Glutamate racemase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
Length = 279
Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats.
Identities = 50/255 (19%), Positives = 98/255 (38%), Gaps = 5/255 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + + L ++
Sbjct: 13 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFVFEMVE-FLKQF 71
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA L+ P + A T+ G I ++ T T++
Sbjct: 72 PLKALVVACNTAAATALAALQEALSIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIKSN 131
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+H + +H + LA+ VE + ++++ + + D +
Sbjct: 132 MYEKALHELDTYLKVHSHACPTLATVVENQLE----DTAYVTEQVKQALLPLTEEDIDTL 187
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYPL+ ++ V + +++ A +L + H F +G
Sbjct: 188 ILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFTTGS 247
Query: 256 PDIAMRRLMQGFGLK 270
+ G +
Sbjct: 248 VSSFEHIAERWLGYQ 262
>gi|300691131|ref|YP_003752126.1| glutamate racemase [Ralstonia solanacearum PSI07]
gi|299078191|emb|CBJ50834.1| Glutamate racemase [Ralstonia solanacearum PSI07]
Length = 277
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 105/258 (40%), Gaps = 6/258 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + +R + +
Sbjct: 4 RAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKSPQFIAERTLRVCG- 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L VIACNTA LR+ ++ +G P +K AAA ++S ++ +L+T +
Sbjct: 63 WLVGQGCKALVIACNTATAQAVHLLRAQL-AVPVIGVEPGLKPAAATSRSRVVGVLATES 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TLR + L+ + C + L +E + + ++
Sbjct: 122 TLRSDKFARLLGNVSGDCRVLCQPGYGLVPLIERGDT----HSPAVLELLQAYLQPMLEA 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D +VL CTHYP + R+++ + +D ++AR L T
Sbjct: 178 GADTLVLGCTHYPFLQDAIREIAGDRLTLIDTGHAVARHLGRTLAAAQLQATSAAASPRF 237
Query: 251 FLSGKPDIAMRRLMQGFG 268
+ + G
Sbjct: 238 LSTADVLPLQAMVAALLG 255
>gi|134283052|ref|ZP_01769754.1| glutamate racemase [Burkholderia pseudomallei 305]
gi|237509359|ref|ZP_04522074.1| glutamate racemase [Burkholderia pseudomallei MSHR346]
gi|134245700|gb|EBA45792.1| glutamate racemase [Burkholderia pseudomallei 305]
gi|235001564|gb|EEP50988.1| glutamate racemase [Burkholderia pseudomallei MSHR346]
Length = 290
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 67/276 (24%), Positives = 111/276 (40%), Gaps = 11/276 (3%)
Query: 1 MKIDNYPCEK--KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58
M P + + I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D
Sbjct: 1 MTTPYAPDSRAPSARAPIGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDV 60
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ +R + + + L V+ACNTA +R P + +G P IK AA ++
Sbjct: 61 FIVERTLAI-GEWLVAQGAKALVVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHS 118
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
++ + +L+T ATLR L+ + + C L +E G ++
Sbjct: 119 KTRVAGVLATQATLRSARFEALLARHAADCRFLCQPGHGLVEAIERGDTG----SPALRA 174
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+ D +VL CTHYP + R ++ + +D D+IAR+ +L
Sbjct: 175 LLASYLEPMLEAGADTLVLGCTHYPFLDAAIRDVTRNRLHLIDTGDAIARQLARVLDERG 234
Query: 239 THQ---TRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
R + GL +
Sbjct: 235 LRAPASPRPAPLPRFCSTSDGRQLQALAATLLGLDA 270
>gi|266620112|ref|ZP_06113047.1| glutamate racemase [Clostridium hathewayi DSM 13479]
gi|288868341|gb|EFD00640.1| glutamate racemase [Clostridium hathewayi DSM 13479]
Length = 272
Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats.
Identities = 55/251 (21%), Positives = 96/251 (38%), Gaps = 8/251 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL V +++ MPE +Y D PYGN + + + + L
Sbjct: 5 NSPIGVFDSGVGGLTVAREIMRQMPEERIVYFGDTARVPYGNKSGNTVIRFTRQII-RFL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
VIACNTA + + + A T++G I I+ T T+
Sbjct: 64 LTQDVKAIVIACNTATAYALEAVEGELDIPIIGVIHAGARTATQATKNGKIGIIGTEGTI 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R + ++ + +L VEE + ++ E +GK
Sbjct: 124 RSGVYTKVMMEMRPDIEVTGKPCPLLVPLVEEGLLHDSVTDEI----ASRYLSELKGKYI 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA--- 249
D +VL CTHYPL+ +L V ++ + A + +L + + +
Sbjct: 180 DTLVLGCTHYPLLRSTVGRLMGPEVTLVNPAYETALELKSVLTEADLLCSGPAEGQEQYL 239
Query: 250 LFLSGKPDIAM 260
++S +
Sbjct: 240 FYVSDLAEKFT 250
>gi|237785980|ref|YP_002906685.1| glutamate racemase [Corynebacterium kroppenstedtii DSM 44385]
gi|259509812|sp|C4LJY7|MURI_CORK4 RecName: Full=Glutamate racemase
gi|237758892|gb|ACR18142.1| Glutamate racemase [Corynebacterium kroppenstedtii DSM 44385]
Length = 288
Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats.
Identities = 59/276 (21%), Positives = 99/276 (35%), Gaps = 25/276 (9%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL V + + P +YV D PYG + + + D L
Sbjct: 3 NSPIGVFDSGVGGLTVARTIVDQAPTESIMYVGDTAHAPYGPKPREDIIRYSTAIADD-L 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA ++ D+ R + PA ++A A T++G + ++ T T+
Sbjct: 62 VARGAKMIVIACNTAASVFLDKARELYDVPVVGVIEPASRRAVAATRNGRVGVIGTTGTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + +H V VE + +I E +
Sbjct: 122 ASGAYQRCIANLDPNIEVHAVDCPQFVPFVERGITTGR----QIMGLAEAYLEPLQDVGV 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT---------- 242
D +VL CTHYPL+ V + + V + +S+ + +L + +
Sbjct: 178 DTVVLGCTHYPLLTGVIQLVMGDNVTLVSSSEEEGKEVPRVLYQEDLFNDANPEAESLDV 237
Query: 243 ----------RVFDDHALFLSGKPDIAMRRLMQGFG 268
+G P R + G
Sbjct: 238 VDANVVNDYAGPEPVRTFESTGDPHRFARLARRFLG 273
>gi|229137668|ref|ZP_04266273.1| Glutamate racemase [Bacillus cereus BDRD-ST26]
gi|228645783|gb|EEL02012.1| Glutamate racemase [Bacillus cereus BDRD-ST26]
Length = 283
Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats.
Identities = 49/255 (19%), Positives = 99/255 (38%), Gaps = 5/255 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V +++ +P+ Y+ D+ PYG ++ + + L ++
Sbjct: 18 IGVLDSGVGGLTVAREIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFVFEMVE-FLKQF 76
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA L+ P + A T+ G I ++ T T++
Sbjct: 77 PLKALVVACNTAAAAALTALQEALSIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIKSN 136
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+H + +H + LA+ VE + ++++ + + D +
Sbjct: 137 MYEKALHELDTYLKVHSHACPTLATVVENQLE----DTAYVTEQVKQALLPLTKEDIDTL 192
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+ CTHYPL+ ++ V + +++ A +L + +H F +G
Sbjct: 193 IPGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPEHQFFTTGS 252
Query: 256 PDIAMRRLMQGFGLK 270
+ G +
Sbjct: 253 VSSFEHIAERWLGYQ 267
>gi|108758013|ref|YP_633888.1| glutamate racemase [Myxococcus xanthus DK 1622]
gi|27804816|gb|AAO22860.1| glutamate racemase [Myxococcus xanthus]
gi|108461893|gb|ABF87078.1| glutamate racemase [Myxococcus xanthus DK 1622]
Length = 271
Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats.
Identities = 62/257 (24%), Positives = 107/257 (41%), Gaps = 7/257 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I +FDSG+GGL VL+ + +P +Y+ D PYG + + + +L+
Sbjct: 7 SPIGVFDSGVGGLTVLKALMARLPHESTVYLGDTARVPYGTKSGEVVTRYSLKNAEFLLE 66
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L V+ACNTA + L + P +P + A A TQ G + I+ TP T+R
Sbjct: 67 R-GIKLLVVACNTASAVALPALEAALPVPVVGVILPGARAALARTQGGGVGIIGTPGTIR 125
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ S + + + EE + + E D
Sbjct: 126 SGAYQRALESADPRVRAKARACPLFVPLAEEGWTTGDVPLLVAR----DYLAEFTRDGVD 181
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFDDHALF 251
+VL CTHYPL+ V ++ V +D++++ A LL + +R +HA +
Sbjct: 182 TLVLGCTHYPLLKGVIAEVVGPQVALVDSAEATADAVAALLSERDGLAPASRGTPEHAYY 241
Query: 252 LSGKPDIAMRRLMQGFG 268
++ P+ M + G
Sbjct: 242 VTDVPERFMEVGARFLG 258
>gi|126458024|ref|YP_001074561.1| glutamate racemase [Burkholderia pseudomallei 1106a]
gi|167722449|ref|ZP_02405685.1| glutamate racemase [Burkholderia pseudomallei DM98]
gi|167826991|ref|ZP_02458462.1| glutamate racemase [Burkholderia pseudomallei 9]
gi|167848505|ref|ZP_02474013.1| glutamate racemase [Burkholderia pseudomallei B7210]
gi|167897057|ref|ZP_02484459.1| glutamate racemase [Burkholderia pseudomallei 7894]
gi|167905441|ref|ZP_02492646.1| glutamate racemase [Burkholderia pseudomallei NCTC 13177]
gi|167913734|ref|ZP_02500825.1| glutamate racemase [Burkholderia pseudomallei 112]
gi|167921675|ref|ZP_02508766.1| glutamate racemase [Burkholderia pseudomallei BCC215]
gi|217424462|ref|ZP_03455960.1| glutamate racemase [Burkholderia pseudomallei 576]
gi|226199169|ref|ZP_03794730.1| glutamate racemase [Burkholderia pseudomallei Pakistan 9]
gi|242313204|ref|ZP_04812221.1| glutamate racemase [Burkholderia pseudomallei 1106b]
gi|254198957|ref|ZP_04905375.1| glutamate racemase [Burkholderia pseudomallei S13]
gi|254296816|ref|ZP_04964270.1| glutamate racemase [Burkholderia pseudomallei 406e]
gi|126231792|gb|ABN95205.1| glutamate racemase [Burkholderia pseudomallei 1106a]
gi|157806660|gb|EDO83830.1| glutamate racemase [Burkholderia pseudomallei 406e]
gi|169657129|gb|EDS88523.1| glutamate racemase [Burkholderia pseudomallei S13]
gi|217392386|gb|EEC32410.1| glutamate racemase [Burkholderia pseudomallei 576]
gi|225928768|gb|EEH24794.1| glutamate racemase [Burkholderia pseudomallei Pakistan 9]
gi|242136443|gb|EES22846.1| glutamate racemase [Burkholderia pseudomallei 1106b]
Length = 290
Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats.
Identities = 67/276 (24%), Positives = 111/276 (40%), Gaps = 11/276 (3%)
Query: 1 MKIDNYPCEK--KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58
M P + + I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D
Sbjct: 1 MTTPYAPDSRAPSARAPIGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDV 60
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ +R + + + L V+ACNTA +R P + +G P IK AA ++
Sbjct: 61 FIVERTLAI-GEWLVAQGAKALVVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHS 118
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
++ + +L+T ATLR L+ + + C L +E G ++
Sbjct: 119 KTRVAGVLATQATLRSARFEALLARHAADCRFLCQPGHGLVEAIERGDTG----SPALRA 174
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+ D +VL CTHYP + R ++ + +D D+IAR+ +L
Sbjct: 175 LLASYLEPMLEAGADTLVLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIARQLARVLDERG 234
Query: 239 THQ---TRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
R + GL +
Sbjct: 235 LRAPASPRPAPLPRFCSTSDGRQLQALAATLLGLDA 270
>gi|253991699|ref|YP_003043055.1| glutamate racemase [Photorhabdus asymbiotica subsp. asymbiotica
ATCC 43949]
gi|253783149|emb|CAQ86314.1| glutamate racemase [Photorhabdus asymbiotica]
Length = 268
Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats.
Identities = 88/263 (33%), Positives = 141/263 (53%), Gaps = 4/263 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K ++ ++L+FDSG+GGL V Q++R L+P+ H+IYV D+ FPYG + + +R++ +
Sbjct: 2 NKTVRPTVLVFDSGVGGLSVYQEIRQLLPDLHYIYVFDNEAFPYGEKSEEFIIERVVEIV 61
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
S + K+ + VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T
Sbjct: 62 SAVQQKHPLAIVVIACNTASTVSLPALRERF-HFSVVGVVPAIKPAAKLTCNGIVGLLAT 120
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ R+YT LI + + C I + S L E G K+ + +K+ ++ KE
Sbjct: 121 RATVNRSYTKELIERFAADCRIESIGSAELVELAEAKLHGNKVSSEALKQILKPWLKMKE 180
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
D +VL CTH+PL+ Q+ P +D+ +IARR L+ D
Sbjct: 181 PP--DTVVLGCTHFPLLAEELIQVLPDGTRLIDSGAAIARRTAWLVKHQENLVCTSIDSL 238
Query: 249 ALFLSGKPDI-AMRRLMQGFGLK 270
A + D A+ ++Q +G
Sbjct: 239 AYCMKMNVDTDALIPVLQAYGFS 261
>gi|108800810|ref|YP_641007.1| glutamate racemase [Mycobacterium sp. MCS]
gi|119869950|ref|YP_939902.1| glutamate racemase [Mycobacterium sp. KMS]
gi|108771229|gb|ABG09951.1| Glutamate racemase [Mycobacterium sp. MCS]
gi|119696039|gb|ABL93112.1| glutamate racemase [Mycobacterium sp. KMS]
Length = 280
Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats.
Identities = 57/261 (21%), Positives = 106/261 (40%), Gaps = 13/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ IFDSG+GGL V + + +P+ +YV D PYG ++ + + D L +
Sbjct: 11 PVGIFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPQIRAHALAIGDD-LVE 69
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
VIACNTA + + R + P +PA+++A A T++G I ++ T AT+
Sbjct: 70 RGVKALVIACNTASSACLRDARERYAPVPVVEVILPAVRRAVATTRNGRIGVIGTAATIA 129
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + + V+ VE + ++ EG + D
Sbjct: 130 SGAYQDAFAA-ARDIEVIGVACPRFVDFVERGVTSGR----QVLGLAEGYLEPLQRADVD 184
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD------D 247
+VL CTHYP++ + + V + +++ A+ +L ++ + D
Sbjct: 185 TLVLGCTHYPMLSGLIQLAMGDQVTLVSSAEETAKDLLRVLTELDLLRPHPADPGATPAT 244
Query: 248 HALFLSGKPDIAMRRLMQGFG 268
+G P+ + G
Sbjct: 245 RVFESTGDPEAFATLATRFLG 265
>gi|319946457|ref|ZP_08020694.1| glutamate racemase [Streptococcus australis ATCC 700641]
gi|319747425|gb|EFV99681.1| glutamate racemase [Streptococcus australis ATCC 700641]
Length = 264
Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats.
Identities = 51/243 (20%), Positives = 98/243 (40%), Gaps = 8/243 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P +Y+ D PYG ++ + L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEVVYIGDSARAPYGPRPADQIRDYTWEMV-RFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA ++ +E++ +P A T+S I ++ TP T+
Sbjct: 62 LTKNVKMIVLACNTATAVVWEEVKEALDIPVLGVILPGASAAIKATKSKRIGVIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I S + + ++ VE + + + + ++ +
Sbjct: 122 ASDIYRKKIQSLSPEMAVESLACPKFVPLVESNELQSSVTKKVVYETLKP-----LAGKV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HAL 250
D +VL CTHYPL+ + + + V +D+ R LL +++R +D H
Sbjct: 177 DTLVLGCTHYPLLRPIIQNVMGPEVQLIDSGAECVRDISVLLNYFEINRSRQLEDCHHQF 236
Query: 251 FLS 253
+ +
Sbjct: 237 YTT 239
>gi|300866341|ref|ZP_07111042.1| Glutamate racemase [Oscillatoria sp. PCC 6506]
gi|300335646|emb|CBN56202.1| Glutamate racemase [Oscillatoria sp. PCC 6506]
Length = 288
Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats.
Identities = 54/256 (21%), Positives = 95/256 (37%), Gaps = 7/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I IFDSG+GGL VL+++ +P +Y D PYG + + + + L
Sbjct: 7 QQRIGIFDSGVGGLTVLRELYRQLPGESILYFGDTARLPYGTRSAGEITHFVREIMA-WL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ ++ACNT+ L + +++ F +P + A + I +++TPAT
Sbjct: 66 RSLNVKMVIMACNTSSALALETVQAEFDIPILGVILPGARAAVQQGK--RIGVIATPATA 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + V +E+ + ++ ++
Sbjct: 124 ASNAYRRAILEMDVNSQVWQVGCPEFVPLIEQNRIYDPYTLEVARE----YLAPLIQQQI 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +V CTHYP + V R L V +D + + A L + +
Sbjct: 180 DTLVYGCTHYPHLAPVVRSLLHAGVKLVDPAVHVVAAAAQELELLGLRNNGPVMPTRFCV 239
Query: 253 SGKPDIAMRRLMQGFG 268
SG P+ +Q G
Sbjct: 240 SGCPEQFAELSVQWLG 255
>gi|229154555|ref|ZP_04282672.1| Glutamate racemase [Bacillus cereus ATCC 4342]
gi|228628953|gb|EEK85663.1| Glutamate racemase [Bacillus cereus ATCC 4342]
Length = 284
Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats.
Identities = 50/255 (19%), Positives = 98/255 (38%), Gaps = 5/255 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ ++ + L ++
Sbjct: 18 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFVLEMVE-FLKQF 76
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA L+ P + A T+ G I ++ T T++
Sbjct: 77 PLKALVVACNTAAAAALTALQEALSIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIKSN 136
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+H + +H + LA+ VE + ++++ + + D +
Sbjct: 137 MYEKALHELDTYLKVHSHACPTLATVVENQLE----DTAYVTEQVKQALLPLTEEDIDTL 192
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYPL+ ++ V + +++ A +L + H F +G
Sbjct: 193 ILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFTTGS 252
Query: 256 PDIAMRRLMQGFGLK 270
+ G
Sbjct: 253 ALSFEHIAERWLGYH 267
>gi|297571671|ref|YP_003697445.1| glutamate racemase [Arcanobacterium haemolyticum DSM 20595]
gi|296932018|gb|ADH92826.1| glutamate racemase [Arcanobacterium haemolyticum DSM 20595]
Length = 282
Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats.
Identities = 53/266 (19%), Positives = 101/266 (37%), Gaps = 12/266 (4%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ I +FDSGIGGL V + + +P YV D PYG +++ + +
Sbjct: 3 NVRNDAPIGVFDSGIGGLTVARAIIDQLPYESITYVGDTANCPYGPRPIAHVRELALNVM 62
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLIS 124
L + VIACN+A + + + R + + V PA + A T++ I
Sbjct: 63 D-HLVSTGVKMLVIACNSASSAVLHDARERYTKQLGIPVVEVIRPAARAALHATRNNKIG 121
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+++T AT++ + + ++ S+ E D + K
Sbjct: 122 VIATQATIQSGAYDDALAVV-PDVNVFSASAPRFVEFAEAGIT----TGDLVLKTAREYL 176
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
+ D +VL CTHYP + V + V + +++ A+ L N ++
Sbjct: 177 EPIKESGVDTLVLGCTHYPFLSGVIGYVMGEGVLLVSSAEETAKDVYRALTEENLLRSSE 236
Query: 245 FDD--HALFLSGKPDIAMRRLMQGFG 268
++ ++G+ + G
Sbjct: 237 SGAPLYSFNVTGESGSFETLARRFIG 262
>gi|300721344|ref|YP_003710615.1| glutamate racemase [Xenorhabdus nematophila ATCC 19061]
gi|297627832|emb|CBJ88367.1| glutamate racemase [Xenorhabdus nematophila ATCC 19061]
Length = 287
Score = 232 bits (591), Expect = 4e-59, Method: Composition-based stats.
Identities = 86/262 (32%), Positives = 134/262 (51%), Gaps = 4/262 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K + +IL+FDSG+GGL V +++R L+P+ H+IY D+ FPYG + R++ +
Sbjct: 21 NKTARPTILVFDSGVGGLSVYKEIRKLLPDLHYIYAFDNEAFPYGEKTADVIIDRVVKVV 80
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
I K+ + VIACNTA T+ LR F S +G VPAIK AA + + ++ +L+T
Sbjct: 81 DAIQKKHPLAVVVIACNTASTVSLPVLRERF-SFPVVGVVPAIKPAAKLSCNRIVGLLAT 139
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ R YT LI + + C +H + S L E G + DE++K ++ KE
Sbjct: 140 RATVNRGYTKELITRFATDCQVHSIGSAELVELAERKLHGKDVPLDELEKVLKPWLRMKE 199
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
D ++L CTH+PLI Q+ P +D+ +IARR L+ D+
Sbjct: 200 PP--DTVILGCTHFPLIAEELSQVLPDGTRLIDSGAAIARRTAWLIKNRADLFLTTVDNL 257
Query: 249 ALFLSGKPD-IAMRRLMQGFGL 269
A D A+ ++ +G
Sbjct: 258 AYCTKLDADSEALSPVLYEYGF 279
>gi|163868315|ref|YP_001609524.1| glutamate racemase [Bartonella tribocorum CIP 105476]
gi|189082952|sp|A9IU96|MURI_BART1 RecName: Full=Glutamate racemase
gi|161017971|emb|CAK01529.1| Glutamate racemase [Bartonella tribocorum CIP 105476]
Length = 275
Score = 232 bits (591), Expect = 4e-59, Method: Composition-based stats.
Identities = 126/261 (48%), Positives = 178/261 (68%), Gaps = 3/261 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L FDSGIGGL VL++ R L+PE FIYVADD GFPYGNWE++ LK+ ++ +F+++L
Sbjct: 3 ERPVLFFDSGIGGLTVLREARVLIPEIQFIYVADDAGFPYGNWEENILKEHILNIFTNLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+Y P L VIACNT TL+ +LR FP + F+G VPAIK AA T+SG IS+L+TP T+
Sbjct: 63 TRYNPALCVIACNTVSTLMMADLRQKFPHVPFVGTVPAIKSAAEQTKSGFISVLATPGTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT+ LI+S+ QCH+ LV S LA E++ G I + ++KEI CF++K GK T
Sbjct: 123 KRAYTNELINSFAGQCHVQLVGSEKLAGFAEDHLRGKTIDSEALRKEILPCFVKKNGKCT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVFDDHA 249
DVIVLACTHYP +++ FR+ + W V+W+D + +IA+ R LL +I+ + + D A
Sbjct: 183 DVIVLACTHYPFLINFFREQALWSVEWIDPAKAIAKHIRSLLPLSEKIHQKPIKKYQDFA 242
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
L S + L++GFGLK
Sbjct: 243 LLTSKNITASTEHLLKGFGLK 263
>gi|293391663|ref|ZP_06635997.1| glutamate racemase [Aggregatibacter actinomycetemcomitans D7S-1]
gi|290952197|gb|EFE02316.1| glutamate racemase [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 275
Score = 232 bits (591), Expect = 5e-59, Method: Composition-based stats.
Identities = 82/260 (31%), Positives = 134/260 (51%), Gaps = 5/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+++IL FDSG+GGL V ++++ L+P +H++Y D+ FPY + + +R + + I
Sbjct: 6 KSTILFFDSGVGGLSVYREVKQLLPNHHYLYCFDNAYFPYSEKPEEKIIERTLKICQRID 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Y L VIACNTA T++ LR F S+ +G VPAIK AA + + I +L+T T+
Sbjct: 66 QMYPLDLIVIACNTASTVVLPSLREHF-SIPIVGTVPAIKPAAEQSMTKHIGLLATKGTV 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R Y S+LI Y + C + + S L E G I +EIK E+
Sbjct: 125 KRKYLSDLIDKYAADCRVEKIGSTKLVELAERKLHGYPIDLNEIKSEVLTWVTM---SDL 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PLI +Q P + ++D+ ++A+R LL + ++
Sbjct: 182 DCVVLGCTHFPLIKSEIQQCLPQVIYFIDSGAAVAKRVESLLSDVKVRSKNQTNNQVFCT 241
Query: 253 SG-KPDIAMRRLMQGFGLKS 271
P+ + L+Q G ++
Sbjct: 242 KMISPEDGLPNLIQSLGFET 261
>gi|22537740|ref|NP_688591.1| glutamate racemase [Streptococcus agalactiae 2603V/R]
gi|76787427|ref|YP_330218.1| glutamate racemase [Streptococcus agalactiae A909]
gi|76799029|ref|ZP_00781224.1| glutamate racemase [Streptococcus agalactiae 18RS21]
gi|77408489|ref|ZP_00785227.1| glutamate racemase [Streptococcus agalactiae COH1]
gi|29839527|sp|Q8DY92|MURI_STRA5 RecName: Full=Glutamate racemase
gi|123601417|sp|Q3JZT5|MURI_STRA1 RecName: Full=Glutamate racemase
gi|22534630|gb|AAN00464.1|AE014264_19 glutamate racemase [Streptococcus agalactiae 2603V/R]
gi|76562484|gb|ABA45068.1| glutamate racemase [Streptococcus agalactiae A909]
gi|76585615|gb|EAO62178.1| glutamate racemase [Streptococcus agalactiae 18RS21]
gi|77172931|gb|EAO76062.1| glutamate racemase [Streptococcus agalactiae COH1]
Length = 264
Score = 232 bits (591), Expect = 5e-59, Method: Composition-based stats.
Identities = 53/257 (20%), Positives = 96/257 (37%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V+++M +PE I++ D PYG +++ + + +L
Sbjct: 3 SRPIGFLDSGVGGLTVVKEMFRQLPEEEVIFIGDQARAPYGPRPAQQIREFTWQMVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNTA + E++ +P A T G + I+ TP T+
Sbjct: 63 TK-NVKMIVIACNTATAVAWQEIKEKLDIPVLGVILPGASAAIKSTNLGKVGIIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I + + ++ VE + + + + + +
Sbjct: 122 KSDAYRQKIQALSPNTAVVSLACPKFVPIVESNQMSSSLAKKVVYETLSPLVGKL----- 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHAL 250
D ++L CTHYPL+ + + + V +D+ R LL + H
Sbjct: 177 DTLILGCTHYPLLRPIIQNVMGAEVKLIDSGAETVRDISVLLNYFEINHNWQNKHGGHHF 236
Query: 251 FLSGKPDIAMRRLMQGF 267
+ + P Q
Sbjct: 237 YTTASPKGFKEIAEQWL 253
>gi|121635399|ref|YP_975644.1| glutamate racemase [Neisseria meningitidis FAM18]
gi|20177991|sp|Q9RMM3|MURI_NEIMC RecName: Full=Glutamate racemase
gi|166231045|sp|A1KVG8|MURI_NEIMF RecName: Full=Glutamate racemase
gi|6449085|gb|AAF08814.1|AF194079_1 MurI [Neisseria meningitidis]
gi|120867105|emb|CAM10872.1| glutamate racemase [Neisseria meningitidis FAM18]
gi|261391971|emb|CAX49435.1| glutamate racemase [Neisseria meningitidis 8013]
gi|325142940|gb|EGC65299.1| glutamate racemase [Neisseria meningitidis 961-5945]
gi|325205523|gb|ADZ00976.1| glutamate racemase [Neisseria meningitidis M04-240196]
Length = 270
Score = 232 bits (591), Expect = 5e-59, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 106/258 (41%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + L
Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVD-FL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
++ VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 66 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VE ++ + + +
Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVE----EGWLEHEVTRLTVCEYLKPLLADG 181
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 182 IDTLVLGCTHFPLLKPLIGREAH-NVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 240
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 241 YVSDIPLKFRTIGERFLG 258
>gi|291541513|emb|CBL14623.1| glutamate racemase [Ruminococcus bromii L2-63]
Length = 272
Score = 232 bits (591), Expect = 5e-59, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 94/260 (36%), Gaps = 4/260 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
Q++I +FDSG+GGL +++ ++P IY D PYGN + K + +
Sbjct: 1 MSCQDAIGVFDSGLGGLSAVKEFLHVLPNEKIIYFGDTGRVPYGNRSRETISKYALQDAN 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L K+ V AC T ++ D L P A T++G I I+ T
Sbjct: 61 -FLLKHNVKTVVAACGTVSSVAGDMLEEKLSVPYTGVVNPTAFIADQKTKNGKIGIIGTA 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ + + ++ + + VE + ++ I E +
Sbjct: 120 ATISSHSYKLRLEKLNPKYKVYEQACPLFVPLVENGFICR--DDQIVRLVIRRYLSELKE 177
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDH 248
D ++L CTHYPL+ V +D+ A +L N T
Sbjct: 178 TGVDTLILGCTHYPLLRDAIADFMGDGVTLVDSGYETAIYCSKILRENNLLNTDGVHQTP 237
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
++S PD G
Sbjct: 238 EFYVSDTPDGFKSVAGLFLG 257
>gi|254479197|ref|ZP_05092544.1| glutamate racemase [Carboxydibrachium pacificum DSM 12653]
gi|214034860|gb|EEB75587.1| glutamate racemase [Carboxydibrachium pacificum DSM 12653]
Length = 264
Score = 232 bits (591), Expect = 5e-59, Method: Composition-based stats.
Identities = 53/256 (20%), Positives = 103/256 (40%), Gaps = 8/256 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL VL+++ ++PE +IY D PYG+ ++ + + +
Sbjct: 3 SRPIGVFDSGVGGLTVLKRLIQVLPEEDYIYFGDTKRVPYGDRSKEEIELFAGQIINFM- 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNT I + + F + T++ + +++T T+
Sbjct: 62 KEKNVKAVVIACNTTCATID---KGKYDIELFDVLKAGAESGVYCTKNKKVGVIATKRTV 118
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I S Q ++ + +E+ + E C + + K
Sbjct: 119 ESRSYEINIKSINPQIEVYQKACPEFVPLIEKGLYNSPL----AYSVAEKCLKDLKAKEI 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYPL+ + +++ V+ +D + +A + L + N + F+
Sbjct: 175 DTLILGCTHYPLMEGIIKEIMGDGVEVVDPAIRLAFEVKKYLEKNNILNSGPKGKIEFFV 234
Query: 253 SGKPDIAMRRLMQGFG 268
SG + + G
Sbjct: 235 SGDAENFKKTAEMVLG 250
>gi|126442693|ref|YP_001061621.1| glutamate racemase [Burkholderia pseudomallei 668]
gi|126222184|gb|ABN85689.1| glutamate racemase [Burkholderia pseudomallei 668]
Length = 290
Score = 232 bits (591), Expect = 5e-59, Method: Composition-based stats.
Identities = 67/276 (24%), Positives = 111/276 (40%), Gaps = 11/276 (3%)
Query: 1 MKIDNYPCEK--KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58
M P + + I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D
Sbjct: 1 MTTPYAPDSRAPSARAPIGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDV 60
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ +R + + + L V+ACNTA +R P + +G P IK AA ++
Sbjct: 61 FIVERTLAI-GEWLVAQGAKALVVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHS 118
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
++ + +L+T ATLR L+ + + C L +E G ++
Sbjct: 119 KTRVAGVLATQATLRSARFEALLARHAADCRFLCQPGHGLVEAIERGDTG----SPALRT 174
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+ D +VL CTHYP + R ++ + +D D+IAR+ +L
Sbjct: 175 LLASYLEPMLEAGADTLVLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIARQLARVLDERG 234
Query: 239 THQ---TRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
R + GL +
Sbjct: 235 LRAPASPRPAPLPRFCSTSDGRQLQALAATLLGLDA 270
>gi|254185304|ref|ZP_04891892.1| glutamate racemase [Burkholderia pseudomallei 1655]
gi|184209539|gb|EDU06582.1| glutamate racemase [Burkholderia pseudomallei 1655]
Length = 290
Score = 232 bits (591), Expect = 5e-59, Method: Composition-based stats.
Identities = 67/276 (24%), Positives = 111/276 (40%), Gaps = 11/276 (3%)
Query: 1 MKIDNYPCEK--KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58
M P + + I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D
Sbjct: 1 MTTPYAPDSRAPSARAPIGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDV 60
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ +R + + + L V+ACNTA +R P + +G P IK AA ++
Sbjct: 61 FIVERTLAI-GEWLVAQGAKALVVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHS 118
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
++ + +L+T ATLR L+ + + C L +E G ++
Sbjct: 119 KTRVAGVLATQATLRSARFEALLARHAADCRFLCQPGRGLVEAIERGDTG----SPALRT 174
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+ D +VL CTHYP + R ++ + +D D+IAR+ +L
Sbjct: 175 LLASYLEPMLEAGADTLVLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIARQLARVLDERG 234
Query: 239 THQ---TRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
R + GL +
Sbjct: 235 LRAPASPRPAPLPRFCSTSDGRQLQALAATLLGLDA 270
>gi|298243458|ref|ZP_06967265.1| glutamate racemase [Ktedonobacter racemifer DSM 44963]
gi|297556512|gb|EFH90376.1| glutamate racemase [Ktedonobacter racemifer DSM 44963]
Length = 308
Score = 232 bits (591), Expect = 5e-59, Method: Composition-based stats.
Identities = 70/260 (26%), Positives = 116/260 (44%), Gaps = 10/260 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I ++DSG GGL +L ++R ++P F+Y D PYG + + + S L +
Sbjct: 43 PIGVYDSGAGGLTILTELRKILPHEDFLYYGDTRHCPYGVRSEQEIIELAKQ-ASCFLLE 101
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L V+ACNTA + LR +FP + F+G VPA+K AA+ T+ G I + +T +
Sbjct: 102 RGVKLIVVACNTASQAALEALRLSFPDVPFVGVVPAVKPAASLTRKGRIGVAATNQAAKS 161
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y LI + + ++ L + VE+ +++ E++ + DV
Sbjct: 162 AYLQQLIEDFATGVEVYAQGCSELVTLVEK----GQLQGPEVEATLRQSLHPLLQHDIDV 217
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-----HQTRVFDDHA 249
+VL CTH+P + R + V +D+ +IARR R LL + +
Sbjct: 218 LVLGCTHFPALREAIRHIVGPGVQVIDSGAAIARRTRFLLEQAGIAHPIDQASPEQGLLQ 277
Query: 250 LFLSGKPDIAMRRLMQGFGL 269
++ SG Q G
Sbjct: 278 VWCSGDAHTFTTTASQVLGY 297
>gi|78188551|ref|YP_378889.1| glutamate racemase [Chlorobium chlorochromatii CaD3]
gi|78170750|gb|ABB27846.1| glutamate racemase [Chlorobium chlorochromatii CaD3]
Length = 267
Score = 232 bits (591), Expect = 5e-59, Method: Composition-based stats.
Identities = 66/261 (25%), Positives = 107/261 (40%), Gaps = 7/261 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+N I IFDSGIGGL V++ ++ +P IY D PYG ++K S
Sbjct: 1 MNTENPIGIFDSGIGGLTVVKAIQAALPSERIIYFGDTARVPYGPKSQVTIRKYAADD-S 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILST 128
IL +YQP L ++ACNT L D + S+ LG + A A +++G I ++ T
Sbjct: 60 AILMRYQPKLIIVACNTVSALALDVVEKCCGSVPVLGVLKAGASLAVQASRNGRIGVIGT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ + I+ + + + E I+ D E
Sbjct: 120 QATVCSNAYACAINQQAPDYEVTSKACPLFVPLAE----EGFIEHDATALIAEHYLAPLR 175
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
D +VL CTHYP++ +V + + +D+++++A +A +L N
Sbjct: 176 THNIDTLVLGCTHYPILRNVIERTIGSNIRIIDSAEAVALQAGEMLRERNLLNQSPDKKT 235
Query: 249 -ALFLSGKPDIAMRRLMQGFG 268
L +S P G
Sbjct: 236 PHLLVSDLPQKFSTLYQLFMG 256
>gi|319892140|ref|YP_004149015.1| Glutamate racemase [Staphylococcus pseudintermedius HKU10-03]
gi|317161836|gb|ADV05379.1| Glutamate racemase [Staphylococcus pseudintermedius HKU10-03]
gi|323464749|gb|ADX76902.1| glutamate racemase [Staphylococcus pseudintermedius ED99]
Length = 265
Score = 232 bits (591), Expect = 5e-59, Method: Composition-based stats.
Identities = 54/261 (20%), Positives = 96/261 (36%), Gaps = 5/261 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I + DSG+GGL V +++ +P Y+ D PYG + +KK + ++
Sbjct: 1 MDRPIGVMDSGVGGLTVAKEIMRQLPNETIYYLGDVARCPYGPRDQEEVKKFTIE-MANY 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L +Y + VIACNTA + + L+ P + A T++ + +L T T
Sbjct: 60 LVQYDIKMLVIACNTATAVALEPLQEQLKIPVIGVIEPGARTAIMTTKNQNVLVLGTEGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ I ++ V+ VEE + + I
Sbjct: 120 IKSEAYRTHIKKINPHVDVYGVACPGFVPLVEEMKYKDPTITNIV---IHQTLKSWRQTE 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D ++L CTHYPL+ + + AR LL + H H
Sbjct: 177 ADTVILGCTHYPLLYQPIFDYFGKTKTVISSGLETAREVSALLTFSHEHAHYTPQPKHRF 236
Query: 251 FLSGKPDIAMRRLMQGFGLKS 271
F +G+ + + + +
Sbjct: 237 FANGEVRHMTYIIQEWLKIDA 257
>gi|197287060|ref|YP_002152932.1| glutamate racemase [Proteus mirabilis HI4320]
gi|229486247|sp|B4F1H6|MURI_PROMH RecName: Full=Glutamate racemase
gi|194684547|emb|CAR46364.1| glutamate racemase [Proteus mirabilis HI4320]
Length = 288
Score = 232 bits (591), Expect = 5e-59, Method: Composition-based stats.
Identities = 83/264 (31%), Positives = 141/264 (53%), Gaps = 3/264 (1%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ ++L+FDSG+GGL + +++R +P+ H+IYV D+ FPYG + +R++ +
Sbjct: 20 AQSTANPTVLVFDSGVGGLSIYREIREKLPDAHYIYVFDNEAFPYGEKPQEFIIERVVRI 79
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
S + +++ VIACNTA T+ LR+ F + +G VPAIK AA T +G++ +L+
Sbjct: 80 VSAVAQQHELAAIVIACNTASTVSLPALRAKFTDIPIVGVVPAIKPAAKLTCNGVVGLLA 139
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT++R YT LI + ++C +HL+ S L E+ G K+ DE+++ + K
Sbjct: 140 TRATVKRPYTHELIERFATECKVHLLGSAELVELAEKKLHGEKVSCDELRRILAPWLKMK 199
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
E D +VL CTH+PL+ + P +D+ +IARR L+ + +
Sbjct: 200 EPP--DTVVLGCTHFPLLEEELLSVLPDGTRIIDSGGAIARRTAWLVVNQDKIRGSKEIS 257
Query: 248 HALFLSGKP-DIAMRRLMQGFGLK 270
A L ++ ++ FG K
Sbjct: 258 FAYCLKEDEYSELLKPVLADFGFK 281
>gi|86739585|ref|YP_479985.1| glutamate racemase [Frankia sp. CcI3]
gi|86566447|gb|ABD10256.1| glutamate racemase [Frankia sp. CcI3]
Length = 300
Score = 232 bits (591), Expect = 5e-59, Method: Composition-based stats.
Identities = 57/256 (22%), Positives = 101/256 (39%), Gaps = 8/256 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GGL V + + +P +Y+ D PYG +++ + L
Sbjct: 5 PIGVFDSGVGGLTVARAILDQLPHEPLMYLGDTARAPYGPRRIAEVRRYALDALDR-LVD 63
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L VIACNTA + R + +PA ++AAA T+SG + ++ T AT+
Sbjct: 64 EGVKLLVIACNTASAACLRDARERYDIPVIEVIMPATRRAAAATRSGRVGVIGTLATIAS 123
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + + + + VE + ++ E + D
Sbjct: 124 RAYDDAF-TAAAGVELTGAACPAFVDFVERGITCGR----QLLGLTEAYLAPLQEANVDT 178
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFDDHALFL 252
++L CTHYPL+ V + V + +++ A+ +L R + H
Sbjct: 179 VILGCTHYPLLTGVIGLVMGEGVTLVSSAEETAKDTYRVLVRHGLFRDPDLPPPTHRFLT 238
Query: 253 SGKPDIAMRRLMQGFG 268
+G P + R + G
Sbjct: 239 TGDPTLFSRVGRRFLG 254
>gi|254671042|emb|CBA07884.1| Glutamate racemase [Neisseria meningitidis alpha153]
gi|325132881|gb|EGC55559.1| glutamate racemase [Neisseria meningitidis M6190]
Length = 327
Score = 232 bits (591), Expect = 5e-59, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 106/258 (41%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + L
Sbjct: 64 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVD-FL 122
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
++ VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 123 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 182
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VE ++ + + +
Sbjct: 183 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVE----EGWLEHEVTRLTVCEYLKPLLADG 238
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 239 IDTLVLGCTHFPLLKPLIGREAH-NVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 297
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 298 YVSDIPLKFRTIGERFLG 315
>gi|309378294|emb|CBX23082.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|325144995|gb|EGC67278.1| glutamate racemase [Neisseria meningitidis M01-240013]
Length = 270
Score = 232 bits (591), Expect = 6e-59, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 106/258 (41%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + L
Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVD-FL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
++ VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 66 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VE ++ + + +
Sbjct: 126 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVE----EGWLEHEVTRLTVCEYLKPLLADG 181
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 182 IDTLVLGCTHFPLLKPLIGREAH-NVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 240
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 241 YVSDIPLKFRTIGERFLG 258
>gi|228938111|ref|ZP_04100731.1| Glutamate racemase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228970986|ref|ZP_04131623.1| Glutamate racemase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228977589|ref|ZP_04137981.1| Glutamate racemase [Bacillus thuringiensis Bt407]
gi|228782233|gb|EEM30419.1| Glutamate racemase [Bacillus thuringiensis Bt407]
gi|228788795|gb|EEM36737.1| Glutamate racemase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228821596|gb|EEM67601.1| Glutamate racemase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|326938613|gb|AEA14509.1| glutamate racemase [Bacillus thuringiensis serovar chinensis CT-43]
Length = 276
Score = 232 bits (591), Expect = 6e-59, Method: Composition-based stats.
Identities = 50/255 (19%), Positives = 98/255 (38%), Gaps = 5/255 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + + L ++
Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQSFVFEMVE-FLKQF 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA L+ P + A T+ I ++ T T++
Sbjct: 69 PLKALVVACNTAAAAALTALQEALSIPVIGVIHPGARAAIKVTKKEKIGVIGTVGTIKSN 128
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+H + +H + LA+ VE I + ++++ + + D +
Sbjct: 129 MYEKALHELDTYLEVHSHACPTLATVVENRLEDIAY----VTQQVKQALLPLTKEDIDTL 184
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYPL+ ++ V + +++ A +L + H F +G
Sbjct: 185 ILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTGS 244
Query: 256 PDIAMRRLMQGFGLK 270
+ G +
Sbjct: 245 VLSFEHIAERWLGYQ 259
>gi|227488222|ref|ZP_03918538.1| glutamate racemase [Corynebacterium glucuronolyticum ATCC 51867]
gi|227542820|ref|ZP_03972869.1| glutamate racemase [Corynebacterium glucuronolyticum ATCC 51866]
gi|227091792|gb|EEI27104.1| glutamate racemase [Corynebacterium glucuronolyticum ATCC 51867]
gi|227181446|gb|EEI62418.1| glutamate racemase [Corynebacterium glucuronolyticum ATCC 51866]
Length = 261
Score = 231 bits (590), Expect = 6e-59, Method: Composition-based stats.
Identities = 59/254 (23%), Positives = 99/254 (38%), Gaps = 7/254 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL V + + +P Y+ D PYG ++ + L
Sbjct: 4 RPIGIFDSGVGGLTVARAIADQLPHESIHYLGDTAHAPYGPRTADEVRALSTSVADQ-LV 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
L VIACNTA ++ DE R+ + PA+++A T++G +++L T T+R
Sbjct: 63 ARDIKLLVIACNTATSVFLDEARALYDVPVLGVIEPAVRRAVQVTKNGKVAVLGTVGTIR 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ SY + + VE + +I + + D
Sbjct: 123 SGEYQRQMESY-EGVTCYAAPAPRFVDFVERGITTGR----QILGVAQAYVSPLQEAGVD 177
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALFL 252
VL CTHYPL+ V + V + +S+ A+ LL + +
Sbjct: 178 TCVLGCTHYPLLSGVIQLAIGDHVTLVSSSEETAKAVVRLLMEEDLLAPEDAEPERRYET 237
Query: 253 SGKPDIAMRRLMQG 266
+G P + + +
Sbjct: 238 TGDPRLFAQLASRF 251
>gi|53721405|ref|YP_110390.1| glutamate racemase [Burkholderia pseudomallei K96243]
gi|167818613|ref|ZP_02450293.1| glutamate racemase [Burkholderia pseudomallei 91]
gi|52211819|emb|CAH37818.1| putative glutamate racemase [Burkholderia pseudomallei K96243]
Length = 290
Score = 231 bits (590), Expect = 6e-59, Method: Composition-based stats.
Identities = 65/262 (24%), Positives = 108/262 (41%), Gaps = 9/262 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D + +R + + + L
Sbjct: 15 RAPIGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDVFIVERTLAI-GEWL 73
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
V+ACNTA +R P + +G P IK AA ++++ + +L+T ATL
Sbjct: 74 VAQGAKALVVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQATL 132
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R L+ + + C L +E G ++ +
Sbjct: 133 RSARFEALLARHAADCRFLCQPGHGLVEAIERGDTG----SPALRALLASYLEPMLEAGA 188
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ---TRVFDDHA 249
D +VL CTHYP + R ++ + +D D+IAR+ +L R
Sbjct: 189 DTLVLGCTHYPFLDAAIRDVTRNRLHLIDTGDAIARQLARVLDERGLRAPASPRPAPLPR 248
Query: 250 LFLSGKPDIAMRRLMQGFGLKS 271
+ GL +
Sbjct: 249 FCSTSDGRQLQALAATLLGLDA 270
>gi|83748331|ref|ZP_00945355.1| Glutamate racemase [Ralstonia solanacearum UW551]
gi|207723937|ref|YP_002254335.1| glutamate racemase protein [Ralstonia solanacearum MolK2]
gi|83724953|gb|EAP72107.1| Glutamate racemase [Ralstonia solanacearum UW551]
gi|206589144|emb|CAQ36106.1| glutamate racemase protein [Ralstonia solanacearum MolK2]
Length = 277
Score = 231 bits (590), Expect = 6e-59, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 104/258 (40%), Gaps = 6/258 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + +R + +
Sbjct: 4 RAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKSPEFIAERTLRVCE- 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L VIACNTA LR ++ +G P +K A A +QS ++ +L+T +
Sbjct: 63 WLVGQGCKALVIACNTATAQAVHLLRERL-AVPVIGVEPGLKPAVATSQSRVVGVLATES 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TLR + L+ + C + L +E + + ++
Sbjct: 122 TLRSDKFARLLGNVSGDCQVLCQPGYGLVPLIERGDT----HSPAVLELLQAYLQPMLDA 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D +VL CTHYP + ++++ + +D ++AR L +
Sbjct: 178 GADTLVLGCTHYPFLRDAIQEIAGERLALIDTGHAVARHLGRTLAAAHLQAAGAAASPRF 237
Query: 251 FLSGKPDIAMRRLMQGFG 268
+G + G
Sbjct: 238 LSTGDVLPLQAMVAALLG 255
>gi|304386743|ref|ZP_07369012.1| glutamate racemase [Neisseria meningitidis ATCC 13091]
gi|304339178|gb|EFM05263.1| glutamate racemase [Neisseria meningitidis ATCC 13091]
Length = 327
Score = 231 bits (590), Expect = 7e-59, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 106/258 (41%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + L
Sbjct: 64 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVD-FL 122
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
++ VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 123 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 182
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VE ++ + + +
Sbjct: 183 VNSNAYARAIHRSNPDTLVRTQAAPLLVPLVE----EGWLEHEVTRLTVCEYLKPLLADG 238
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 239 IDTLVLGCTHFPLLKPLIGREAH-NVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 297
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 298 YVSDIPLKFRTIGERFLG 315
>gi|167838899|ref|ZP_02465676.1| glutamate racemase [Burkholderia thailandensis MSMB43]
Length = 290
Score = 231 bits (590), Expect = 7e-59, Method: Composition-based stats.
Identities = 71/263 (26%), Positives = 112/263 (42%), Gaps = 9/263 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ I IFDSG+GGL VL+ +R +P +YVAD + PYG +D + +R + +
Sbjct: 12 SPARTPIGIFDSGLGGLSVLRAVREQLPGEAIVYVADSLHAPYGPRDDAFIIERTLAI-G 70
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L V+ACNTA +R P + +G P IK AA ++++ + +L+T
Sbjct: 71 EWLVAQGAKALVVACNTATAQSIAVVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQ 129
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
ATLR LI Y + C + L +E G E++ + G
Sbjct: 130 ATLRSARFEALIARYAADCRFIRQAGHGLVEAIERGDTG----SPELRALLAGYLEPMLE 185
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ---TRVFD 246
D +VL CTHYP + R ++ + +D D+IAR+ +L +R
Sbjct: 186 AGADTLVLGCTHYPFLDAAIRDVTSNCLHLIDTGDAIARQLARILDERGLRAPASSRPAP 245
Query: 247 DHALFLSGKPDIAMRRLMQGFGL 269
L + GL
Sbjct: 246 LPRLCSTSDGRHLQTLAATLLGL 268
>gi|254805513|ref|YP_003083734.1| glutamate racemase MurI [Neisseria meningitidis alpha14]
gi|254669055|emb|CBA07540.1| glutamate racemase MurI [Neisseria meningitidis alpha14]
Length = 327
Score = 231 bits (590), Expect = 7e-59, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 106/258 (41%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + L
Sbjct: 64 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVD-FL 122
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
++ VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 123 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 182
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VE ++ + + +
Sbjct: 183 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVE----EGWLEHEVTRLTVCEYLKPLLADG 238
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 239 IDTLVLGCTHFPLLKPLIGREAH-NVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 297
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 298 YVSDIPLKFRTIGERFLG 315
>gi|116333824|ref|YP_795351.1| glutamate racemase [Lactobacillus brevis ATCC 367]
gi|122269489|sp|Q03R52|MURI_LACBA RecName: Full=Glutamate racemase
gi|116099171|gb|ABJ64320.1| Glutamate racemase [Lactobacillus brevis ATCC 367]
Length = 276
Score = 231 bits (590), Expect = 7e-59, Method: Composition-based stats.
Identities = 49/256 (19%), Positives = 95/256 (37%), Gaps = 5/256 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL VL++++ L+P + +++ D PYG + + +
Sbjct: 3 NDPIGLMDSGVGGLTVLKEVQRLLPTENTVFLGDQARLPYGPRSVAEVTMFTKQIAQFLR 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA ++ T P P + A T++ I +++T T+
Sbjct: 63 QQAGIKALVIACNTATAAALTTMQQTLPIPVIGVIAPGAQAAVQTTRNHRIGVIATAGTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I + I V+ + + E+ + + + K+
Sbjct: 123 KSDQYRRDILAAAPNSQIFSVACPEMVTLAEQN----DLTTTHARSVVAANLASLMDKKI 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALF 251
D +V+ CTH+PL+ + V +D + A + +L F
Sbjct: 179 DTLVMGCTHFPLLRSAIQHAVGSQVTLVDPGLATAEQTAAILKTHGLLNPATTRGTAQFF 238
Query: 252 LSGKPDIAMRRLMQGF 267
+G+ Q
Sbjct: 239 TTGETAHFDTLASQWL 254
>gi|76818560|ref|YP_337086.1| glutamate racemase [Burkholderia pseudomallei 1710b]
gi|254187190|ref|ZP_04893704.1| glutamate racemase [Burkholderia pseudomallei Pasteur 52237]
gi|76583033|gb|ABA52507.1| glutamate racemase [Burkholderia pseudomallei 1710b]
gi|157934872|gb|EDO90542.1| glutamate racemase [Burkholderia pseudomallei Pasteur 52237]
Length = 290
Score = 231 bits (590), Expect = 7e-59, Method: Composition-based stats.
Identities = 65/262 (24%), Positives = 108/262 (41%), Gaps = 9/262 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D + +R + + + L
Sbjct: 15 RAPIGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDVFIVERTLAI-GEWL 73
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
V+ACNTA +R P + +G P IK AA ++++ + +L+T ATL
Sbjct: 74 VAQGAKALVVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQATL 132
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R L+ + + C L +E G ++ +
Sbjct: 133 RSARFEALLARHAADCRFLCQPGHGLVEAIERGDTG----SPALRALLASYLEPMLEAGA 188
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ---TRVFDDHA 249
D +VL CTHYP + R ++ + +D D+IAR+ +L R
Sbjct: 189 DTLVLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIARQLARVLDERGLRAPASPRPAPLPR 248
Query: 250 LFLSGKPDIAMRRLMQGFGLKS 271
+ GL +
Sbjct: 249 FCSTSDGRQLQALAATLLGLDA 270
>gi|86130768|ref|ZP_01049367.1| Asp/Glu/hydantoin racemase [Dokdonia donghaensis MED134]
gi|85818179|gb|EAQ39339.1| Asp/Glu/hydantoin racemase [Dokdonia donghaensis MED134]
Length = 268
Score = 231 bits (590), Expect = 7e-59, Method: Composition-based stats.
Identities = 69/257 (26%), Positives = 115/257 (44%), Gaps = 6/257 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+N I +FDSGIGG + +++ +P IY+AD PYG + +
Sbjct: 1 MSNKNVIGVFDSGIGGTSIWKEIVTRLPGEDTIYIADSKNAPYGAKSKEDIIALSVKNTE 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L + VIACNTA T + LR + + F+G PAIK AA +QS I IL+T
Sbjct: 61 K-LIALGAKIIVIACNTATTNAINYLRENYK-IPFIGIEPAIKPAAVQSQSKAIGILATK 118
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
TL + + + V L +E+ E+ +E
Sbjct: 119 GTLNSSLFQTTSERWTQGVDVIEVIGEGLVPLIEQGDLENI----ELYNLLESYIQPMVE 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
K D +VL C+HYP ++ + +++ P V +D+ ++AR+ +L +N V +H
Sbjct: 175 KNIDYLVLGCSHYPYLIPLLKKMLPPHVAIIDSGLAVARQTEAVLKELNNLSGDVSSEHY 234
Query: 250 LFLSGKPDIAMRRLMQG 266
L+ +G + + L++
Sbjct: 235 LYTNGDVKVLKKVLLRF 251
>gi|262370036|ref|ZP_06063363.1| glutamate racemase [Acinetobacter johnsonii SH046]
gi|262315075|gb|EEY96115.1| glutamate racemase [Acinetobacter johnsonii SH046]
Length = 289
Score = 231 bits (590), Expect = 7e-59, Method: Composition-based stats.
Identities = 67/273 (24%), Positives = 120/273 (43%), Gaps = 16/273 (5%)
Query: 6 YPCEKKL-----QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
+P + I IFDSGIGGL + Q++ +P FIY AD PYG +D +
Sbjct: 8 FPLINPMPKATANAPIGIFDSGIGGLSIAQEIAKHLPHERFIYFADTAHVPYGPRDDQNI 67
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQ 119
++ L + ++V+ACNTA D LR + + +G VPA+K A ++
Sbjct: 68 RELTAQAIE-WLYRQGCKVAVVACNTASAFSLDYLREHYGDNFPIIGLVPALKPAVLQSK 126
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVS--QCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
S +++L+TPAT R +++ + + V+ + L VE A
Sbjct: 127 SKTVAVLATPATFRGQLIKDVVDKFAQPSGVTVIPVTCLDLVPFVESGAQ----MSAACL 182
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237
++ + D +VL CTHYP + + + + +D+ ++AR+ +L +
Sbjct: 183 ATLKDILQPVVDQGADYLVLGCTHYPFLKIAIQSIFGQKLTLIDSGLAVARQTARILIKN 242
Query: 238 NTHQTRVFDD---HALFLSGKPDIAMRRLMQGF 267
+ D ++SG ++R ++Q
Sbjct: 243 ELLFEQNHDGDVRIECYVSGNNAESLRPILQLL 275
>gi|255326294|ref|ZP_05367380.1| glutamate racemase [Rothia mucilaginosa ATCC 25296]
gi|255296748|gb|EET76079.1| glutamate racemase [Rothia mucilaginosa ATCC 25296]
Length = 350
Score = 231 bits (590), Expect = 7e-59, Method: Composition-based stats.
Identities = 58/269 (21%), Positives = 102/269 (37%), Gaps = 12/269 (4%)
Query: 6 YPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
P I +FDSG+GGL V + + +P IYV D PYG + ++ +
Sbjct: 21 APVGPTAAAPIGVFDSGVGGLTVARAIMDQLPHERIIYVGDTAHGPYGPLKIAEVRANAL 80
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSG 121
+ + L + VIACNTA + + R + + + PA ++A A T++
Sbjct: 81 RIMDE-LVDSGVKMLVIACNTASAAVLRDARERYTRQYGIPVIEVIQPAARRALAATRNR 139
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I +++T AT+ + +H V+ VE+ E+ +
Sbjct: 140 KIGVIATEATVTSRAYEDTFAIT-PNLEVHSVACPRFVEFVEKGITSG----PELLETAR 194
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D +VL CTHYPL+ V + V + ++D A+ L
Sbjct: 195 EYLQPLKDAGVDTLVLGCTHYPLLAGVISYIMGEDVTLVSSADETAKDVYRELLNHAIES 254
Query: 242 --TRVFDDHALFLSGKPDIAMRRLMQGFG 268
H +G+ + + + G
Sbjct: 255 PVPAENPHHEFLATGESETFSQLARRFLG 283
>gi|298207461|ref|YP_003715640.1| Glutamate racemase [Croceibacter atlanticus HTCC2559]
gi|83850097|gb|EAP87965.1| Glutamate racemase [Croceibacter atlanticus HTCC2559]
Length = 263
Score = 231 bits (590), Expect = 7e-59, Method: Composition-based stats.
Identities = 62/254 (24%), Positives = 110/254 (43%), Gaps = 6/254 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ I IFDSG+GG + +++ L+P IY+AD PYG + + +
Sbjct: 1 MQNNAPIGIFDSGVGGTSIWREIHQLLPLEQTIYLADSKYAPYGEKTKDEIVELSIKNTE 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L + ++ACNTA T LR+ + ++ + PAIK AA T++ + IL+T
Sbjct: 61 K-LISLGAKVIIVACNTATTNAIKHLRANY-TLPIIAIEPAIKPAALNTKTKAVGILATQ 118
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
TL + Y I V L +E K E+++ ++
Sbjct: 119 GTLNSELFTQTSELYARDIDIIEVFGKGLVPEIEAGRQDGK----EVERLLKLYLKPMLD 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
K D +VL C+HYP ++ ++L P V +D+ ++AR+ + +L N
Sbjct: 175 KNIDYLVLGCSHYPYLIPKLKELLPKTVTIIDSGLAVARQTKAVLEHYNLSAISPQPAPI 234
Query: 250 LFLSGKPDIAMRRL 263
+ + +R++
Sbjct: 235 FYTNSDNLEPLRQI 248
>gi|325130825|gb|EGC53559.1| glutamate racemase [Neisseria meningitidis OX99.30304]
Length = 270
Score = 231 bits (590), Expect = 7e-59, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 106/258 (41%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + L
Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIEHFSMQIVD-FL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
++ VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 66 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VE ++ + + +
Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVE----EGWLEHEVTRLTVCEYLKPLLADG 181
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 182 IDTLVLGCTHFPLLKPLIGREAH-NVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 240
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 241 YVSDIPLKFRTIGERFLG 258
>gi|229095486|ref|ZP_04226477.1| Glutamate racemase [Bacillus cereus Rock3-29]
gi|228688032|gb|EEL41919.1| Glutamate racemase [Bacillus cereus Rock3-29]
Length = 275
Score = 231 bits (589), Expect = 8e-59, Method: Composition-based stats.
Identities = 50/255 (19%), Positives = 98/255 (38%), Gaps = 5/255 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + + L ++
Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFVFEMVE-FLKQF 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA L+ P + A T+ G I ++ T T++
Sbjct: 69 PLKALVVACNTAAAAALTALQEALSIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIQSN 128
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+H + +H + LA+ VE + ++++ + + D +
Sbjct: 129 MYEKALHELDTYLEVHSHACPTLATVVENQLE----DTAYVTQQVKQALLPLTKEDIDTL 184
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYPL+ ++ V + +++ A +L + H F +G
Sbjct: 185 ILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTGS 244
Query: 256 PDIAMRRLMQGFGLK 270
+ G +
Sbjct: 245 VLSFEHIAERWLGYE 259
>gi|17546675|ref|NP_520077.1| glutamate racemase [Ralstonia solanacearum GMI1000]
gi|20177976|sp|Q8XY07|MURI_RALSO RecName: Full=Glutamate racemase
gi|17428974|emb|CAD15658.1| probable glutamate racemase protein [Ralstonia solanacearum
GMI1000]
Length = 277
Score = 231 bits (589), Expect = 8e-59, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 103/258 (39%), Gaps = 6/258 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + R + +
Sbjct: 4 RAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKPPEFIAGRTLRVCE- 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L VIACNTA LR ++ +G P +K A A ++S ++ +L+T +
Sbjct: 63 WLVGQGCKALVIACNTATAQAVHLLREQL-AVPVIGVEPGLKPAVATSRSRVVGVLATES 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TLR + L+ + C + L +E + + + +
Sbjct: 122 TLRSDKFARLLGNVSGDCRVLCQPGYGLVPLIERGDT----HSPAVLELLRAYLLPMLEA 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D +VL CTHYP + R+++ + +D ++AR L + T
Sbjct: 178 GADTLVLGCTHYPFLQDAIREIAGDRLTLIDTGHAVARHLGRTLAAAHLQATGAAASPRF 237
Query: 251 FLSGKPDIAMRRLMQGFG 268
+ + G
Sbjct: 238 LSTADVLPLQAMVAALLG 255
>gi|325208730|gb|ADZ04182.1| glutamate racemase [Neisseria meningitidis NZ-05/33]
Length = 270
Score = 231 bits (589), Expect = 8e-59, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 106/258 (41%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + L
Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVD-FL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
++ VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 66 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VE ++ + + +
Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVE----EGWLEHEVTRLTVCEYLKPLLADG 181
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 182 IDTLVLGCTHFPLLKPLIGREAH-NVALVDSAITTAEETARVLAQEGLLNTDDNNPDYRF 240
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 241 YVSDIPLKFRTIGERFLG 258
>gi|228957263|ref|ZP_04119029.1| Glutamate racemase [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|228802454|gb|EEM49305.1| Glutamate racemase [Bacillus thuringiensis serovar pakistani str.
T13001]
Length = 265
Score = 231 bits (589), Expect = 8e-59, Method: Composition-based stats.
Identities = 50/253 (19%), Positives = 98/253 (38%), Gaps = 5/253 (1%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+ DSG+GGL V ++ +P+ Y+ D+ PYG ++ + + L ++
Sbjct: 1 MLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQSFVFEMVE-FLKQFPL 59
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
V+ACNTA EL+ P + A T+ I ++ T T++
Sbjct: 60 KALVVACNTAAATALTELQEALSIPVIGVIHPGARAAIKVTKKEKIGVIGTVGTIKSNMY 119
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+H + +H + LA+ VE I + ++++ + + D ++L
Sbjct: 120 EKALHELDTYLEVHSHACPTLATVVENRLEDIAY----VTQQVKQALLPLTKEDIDTLIL 175
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257
CTHYPL+ ++ V + +++ A +L + H F +G
Sbjct: 176 GCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTGSVL 235
Query: 258 IAMRRLMQGFGLK 270
+ G +
Sbjct: 236 SFEHIAERWLGYQ 248
>gi|330941681|gb|EGH44456.1| glutamate racemase [Pseudomonas syringae pv. pisi str. 1704B]
Length = 270
Score = 231 bits (589), Expect = 8e-59, Method: Composition-based stats.
Identities = 68/251 (27%), Positives = 116/251 (46%), Gaps = 5/251 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ IFDSG+GGL VL ++R L+ +Y+AD PYG + +R + +
Sbjct: 10 DAPVGIFDSGVGGLSVLNEIRQLLLSESLLYLADCGHIPYGEKTPEFIIERCLTIAGFFR 69
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA +R +P +G PA+K AA T+SG++ +L+T TL
Sbjct: 70 -EQGAKALVVACNTATAAGVSHIRQRYPDWPIVGMEPAVKPAAEATRSGVVGVLATTGTL 128
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + + + L +E + +I++ ++ R
Sbjct: 129 QSARFAALLDRFANDVRVVTQPCPGLVELIET----GDLVSPQIRQLLQHYVEPLLAARC 184
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D I+L CTHYP + + R++ P V +D ++AR+ + LL R + V D +
Sbjct: 185 DTIILGCTHYPFLKPLLREMLPESVTLIDTGAAVARQLQRLLARSGLLASGVARDTVYWS 244
Query: 253 SGKPDIAMRRL 263
S PD + L
Sbjct: 245 SDIPDNFRKIL 255
>gi|49476942|ref|YP_035099.1| glutamate racemase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|49328498|gb|AAT59144.1| glutamate racemase [Bacillus thuringiensis serovar konkukian str.
97-27]
Length = 276
Score = 231 bits (589), Expect = 8e-59, Method: Composition-based stats.
Identities = 51/255 (20%), Positives = 99/255 (38%), Gaps = 5/255 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + + L ++
Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFVFEMVE-FLKQF 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA T L+ P + A T+ G I ++ T T++
Sbjct: 69 PLKALVVACNTAATATLAALQEALSIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIKSN 128
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+H + +H + LA+ VE + ++++ + + D +
Sbjct: 129 MYEKALHELDTYLKVHSHACPTLATVVENQLE----DTAYVTQQVKQALLPLTEEDIDTL 184
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYPL+ ++ V + +++ A +L + H F +G
Sbjct: 185 ILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFTTGS 244
Query: 256 PDIAMRRLMQGFGLK 270
+ G +
Sbjct: 245 ALSFEHIAERWLGYQ 259
>gi|42780015|ref|NP_977262.1| glutamate racemase [Bacillus cereus ATCC 10987]
gi|42735933|gb|AAS39870.1| glutamate racemase [Bacillus cereus ATCC 10987]
Length = 275
Score = 231 bits (589), Expect = 8e-59, Method: Composition-based stats.
Identities = 50/255 (19%), Positives = 98/255 (38%), Gaps = 5/255 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + + L ++
Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFVFEMVE-FLKQF 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA L+ P + A T+ G I ++ T T++
Sbjct: 69 PLKALVVACNTAAAAALTALQKALSIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIKSN 128
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+H + +H + LA+ VE + ++++ + + D +
Sbjct: 129 MYEKALHELDTYLKVHSHACPTLATVVENQLE----DTAYVTEQVKQALLPLTKEDIDTL 184
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYPL+ ++ V + +++ A +L + H F +G
Sbjct: 185 ILGCTHYPLLESYIKKELGENVTIISSAEETAIELSTILQHKGILSDNLNPVHRFFTTGS 244
Query: 256 PDIAMRRLMQGFGLK 270
+ G +
Sbjct: 245 VSSFEHIAERWLGYQ 259
>gi|83716465|ref|YP_440215.1| glutamate racemase [Burkholderia thailandensis E264]
gi|167616909|ref|ZP_02385540.1| glutamate racemase [Burkholderia thailandensis Bt4]
gi|257140841|ref|ZP_05589103.1| glutamate racemase [Burkholderia thailandensis E264]
gi|83650290|gb|ABC34354.1| glutamate racemase [Burkholderia thailandensis E264]
Length = 288
Score = 231 bits (589), Expect = 8e-59, Method: Composition-based stats.
Identities = 71/262 (27%), Positives = 115/262 (43%), Gaps = 8/262 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
++ I IFDSG+GGL VL+ +R +P+ +YVAD PYG +D + +R + +
Sbjct: 11 SPARSPIGIFDSGLGGLSVLRAVRERLPDEAIVYVADSRHAPYGPRDDAFIIERTLAI-G 69
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L V+ACNTA +R P + +G P IK AA ++++ + +L+T
Sbjct: 70 EWLVAQGAKALVVACNTATAQSIAVVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQ 128
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
ATLR LI + + C + L +E G E++ ++ G
Sbjct: 129 ATLRSARFEALIARHAADCRFICQAGHGLVEAIERGDTG----SPELRAQLAGFLEPMLE 184
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT--HQTRVFDD 247
D +VL CTHYP + R ++ + +D SD+IAR+ +L +
Sbjct: 185 AGADTLVLGCTHYPFLDAAIRDVTSSRLHLIDTSDAIARQLARILDERGLRAPASSRPAP 244
Query: 248 HALFLSGKPDIAMRRLMQGFGL 269
L +G GL
Sbjct: 245 PRLCSTGDGRHLQTLAATLLGL 266
>gi|157373001|ref|YP_001480990.1| glutamate racemase [Serratia proteamaculans 568]
gi|167017321|sp|A8GL72|MURI_SERP5 RecName: Full=Glutamate racemase
gi|157324765|gb|ABV43862.1| glutamate racemase [Serratia proteamaculans 568]
Length = 287
Score = 231 bits (589), Expect = 8e-59, Method: Composition-based stats.
Identities = 89/274 (32%), Positives = 145/274 (52%), Gaps = 8/274 (2%)
Query: 2 KIDNYPCEKKLQ--NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHA 59
++ P + ++L+FDSG+GGL V Q++R L+P+ H+IY D+V FPYG +
Sbjct: 12 SLEAIPSNTTAKTRPTVLVFDSGVGGLSVYQEVRQLLPDLHYIYAFDNVAFPYGEKSEEF 71
Query: 60 LKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119
+ +R++ + S + ++ + +IACNTA T+ LR F + +G VPAIK AA T
Sbjct: 72 IVERVLEIVSAVQQRHPLAIVIIACNTASTVSLPALRERF-TFPVVGVVPAIKPAARLTA 130
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+G++ +L+T T++RTYT LI + + C I L+ S L E G + +KK
Sbjct: 131 NGVVGLLATRGTVQRTYTHELIARFATDCKIELLGSSELVELAEAKLHGEAVPLPTLKKI 190
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
+ +E D +VL CTH+PL+ Q+ P +D+ +IARR L+
Sbjct: 191 LHPWLSMREPP--DTVVLGCTHFPLLAEELMQVLPEGTRLIDSGAAIARRTAWLISTQEN 248
Query: 240 HQTRVFDDHALF--LSGKPDIAMRRLMQGFGLKS 271
+ D+ A L+ D + ++QG+G KS
Sbjct: 249 LVSTQEDNLAYCMALNEDTDALL-PVLQGYGFKS 281
>gi|257126623|ref|YP_003164737.1| glutamate racemase [Leptotrichia buccalis C-1013-b]
gi|257050562|gb|ACV39746.1| glutamate racemase [Leptotrichia buccalis C-1013-b]
Length = 261
Score = 231 bits (589), Expect = 9e-59, Method: Composition-based stats.
Identities = 55/254 (21%), Positives = 104/254 (40%), Gaps = 9/254 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGGL VL+++R ++P Y D PYG + + + L +
Sbjct: 3 IGVFDSGIGGLTVLKEIRKVLPNEKIYYFGDTARVPYGEKTKELIIRYSKEIVE-FLLEK 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA L EL+ F + A T++G I ++ T AT+
Sbjct: 62 DVSAIVVACNTATALALKELKEIFKIPIIGVIEAGARTAINTTKNGKIGVIGTKATINSE 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ I + ++ + + + VEE K+ IK ++ ++ D +
Sbjct: 122 KYTEEIKLFNAEAEVFQKACPLFVPAVEEGILNGKLVNQIIKTYLDDF-----NEKIDTL 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHALFLS 253
+L CTHYPL+ ++ P + +D + A + +L + + ++ +++
Sbjct: 177 ILGCTHYPLLKEAISKIYP-NIKIVDPAKETALDLKEILKENKFLKNDAQKNEEVKYYVT 235
Query: 254 GKPDIAMRRLMQGF 267
+ +
Sbjct: 236 DGKEKFKEIGIMFL 249
>gi|126436408|ref|YP_001072099.1| glutamate racemase [Mycobacterium sp. JLS]
gi|126236208|gb|ABN99608.1| glutamate racemase [Mycobacterium sp. JLS]
Length = 280
Score = 231 bits (589), Expect = 9e-59, Method: Composition-based stats.
Identities = 57/261 (21%), Positives = 106/261 (40%), Gaps = 13/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ IFDSG+GGL V + + +P+ +YV D PYG ++ + + D L +
Sbjct: 11 PVGIFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPQIRAHALAIGDD-LVE 69
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
VIACNTA + + R + P +PA+++A A T++G I ++ T AT+
Sbjct: 70 RGVKALVIACNTASSACLRDARERYAPVSVVEVILPAVRRAVATTRNGRIGVIGTAATIA 129
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + + V+ VE + ++ EG + D
Sbjct: 130 SGAYQDAFAA-ARDIEVIGVACPRFVDFVERGVTSGR----QVLGLAEGYLEPLQRADVD 184
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD------D 247
+VL CTHYP++ + + V + +++ A+ +L ++ + D
Sbjct: 185 TLVLGCTHYPMLSGLIQLAMGDQVTLVSSAEETAKDLLRVLTELDLLRPHPADPGATPAT 244
Query: 248 HALFLSGKPDIAMRRLMQGFG 268
+G P+ + G
Sbjct: 245 RVFESTGDPEAFATLATRFLG 265
>gi|299066438|emb|CBJ37623.1| Glutamate racemase [Ralstonia solanacearum CMR15]
Length = 277
Score = 231 bits (589), Expect = 9e-59, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 103/258 (39%), Gaps = 6/258 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + R + +
Sbjct: 4 RAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKPPEFIAGRTLRVCE- 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L VIACNTA LR ++ +G P +K A A ++S ++ +L+T +
Sbjct: 63 WLVGQGCKALVIACNTATAQAVHLLREQL-AVPVIGVEPGLKPAVATSRSRVVGVLATES 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TLR + L+ + C + L +E + + + +
Sbjct: 122 TLRSDKFARLLGTVSGDCRVLCQPGYGLVPLIERGDT----HSPAVLELLRAYLLPMLEA 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D +VL CTHYP + R+++ + +D ++AR L + T
Sbjct: 178 GADTLVLGCTHYPFLQDAIREIAGDRLTLIDTGHAVARHLGRTLAAAHLQATGAAASPRF 237
Query: 251 FLSGKPDIAMRRLMQGFG 268
+ + G
Sbjct: 238 LSTADVLPLQAMVAALLG 255
>gi|1346607|sp|P48797|MURI_LACBR RecName: Full=Glutamate racemase
gi|468450|dbj|BAA06106.1| glutamate racemase [Lactobacillus brevis]
Length = 276
Score = 231 bits (589), Expect = 9e-59, Method: Composition-based stats.
Identities = 50/256 (19%), Positives = 98/256 (38%), Gaps = 5/256 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL VL++++ L+P + +++ D PYG + + +
Sbjct: 3 NDPIGLMDSGVGGLTVLKEVQRLLPTENTVFLGDQARLPYGPRSVAEVTMFTKQIAQFLR 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACNTA ++ T P P + A T++ I +++T T+
Sbjct: 63 QQARIKALVIACNTATAAALTTMQQTLPIPVIGVIAPGAQAAVQTTRNHRIGVIATAGTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I + I V+ + + E+ + + + K+
Sbjct: 123 KSDQYRRDILAAAPNSQIFSVACPEMVTLAEQN----DLTTTHAQSVVAANLASLMDKKI 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALF 251
D +V+ CTH+PL+ + V +D + A + +L + F
Sbjct: 179 DTLVMGCTHFPLLRSAIQHAVGSQVTLVDPGLATAEQTVAILKTRGLLNSATTRGTAQFF 238
Query: 252 LSGKPDIAMRRLMQGF 267
+G+ D Q
Sbjct: 239 TTGETDQFDTLASQWL 254
>gi|317164818|gb|ADV08359.1| glutamate racemase [Neisseria gonorrhoeae TCDC-NG08107]
Length = 349
Score = 231 bits (589), Expect = 9e-59, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 105/258 (40%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + L
Sbjct: 86 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVD-FL 144
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 145 LGHDVKAMVIACNTIAAVAGRKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 204
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VE ++ + + +
Sbjct: 205 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVE----EGWLEHEVTRLTVCEYLKPLLADG 260
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 261 IDTLVLGCTHFPLLKPLIGREA-HNVALVDSAITTAEETARVLAQEGLLDTGNNNPDYRF 319
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 320 YVSDIPLKFRTIGERFLG 337
>gi|331695366|ref|YP_004331605.1| glutamate racemase [Pseudonocardia dioxanivorans CB1190]
gi|326950055|gb|AEA23752.1| Glutamate racemase [Pseudonocardia dioxanivorans CB1190]
Length = 275
Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats.
Identities = 61/260 (23%), Positives = 107/260 (41%), Gaps = 10/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + +P +YV D PYG +++ + + + L
Sbjct: 7 DAPIGIFDSGVGGLTVARAVIDQLPAERIVYVGDTEHGPYGPLRIPEIRRHALAIGDE-L 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L VIACNTA + R +P +PA+++A A T++G I ++ T AT+
Sbjct: 66 IERGVKLLVIACNTASAACLADARERYPVPVVEVVLPAVRRAVAATRNGRIGVIGTSATI 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
++ + + V+ VE + +I + + R
Sbjct: 126 TSGAYADAFSA-ARDVSVTSVACPRFVDFVERGVTSGR----QILGIAQSYLEPLQRARV 180
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ----TRVFDDH 248
D +VL CTHYPL+ + + + V + ++D A+ L + + H
Sbjct: 181 DTVVLGCTHYPLLSGLLQIVLGPEVTLVSSADETAKDVVRTLMAADLLRDPETDPPPGPH 240
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+G P+ R + G
Sbjct: 241 EFLATGDPEPFRRLGRRFLG 260
>gi|196037606|ref|ZP_03104917.1| glutamate racemase [Bacillus cereus NVH0597-99]
gi|218902060|ref|YP_002449894.1| glutamate racemase [Bacillus cereus AH820]
gi|196031848|gb|EDX70444.1| glutamate racemase [Bacillus cereus NVH0597-99]
gi|218535080|gb|ACK87478.1| glutamate racemase [Bacillus cereus AH820]
Length = 276
Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats.
Identities = 50/255 (19%), Positives = 98/255 (38%), Gaps = 5/255 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + + L ++
Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFVFEMVE-FLKQF 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA L+ P + A T+ G I ++ T T++
Sbjct: 69 PLKALVVACNTAAAATLAALQEALSIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIQSN 128
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+H + +H + LA+ VE + ++++ + + D +
Sbjct: 129 MYEKALHELDTYLKVHSHACPTLATVVE----NRLEDTAYVTQQVKQALLPLTKEDIDTL 184
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYPL+ ++ V + +++ A +L + H F +G
Sbjct: 185 ILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFTTGS 244
Query: 256 PDIAMRRLMQGFGLK 270
+ G +
Sbjct: 245 VSSFEHIAERWLGYQ 259
>gi|319408556|emb|CBI82209.1| Glutamate racemase [Bartonella schoenbuchensis R1]
Length = 270
Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats.
Identities = 130/259 (50%), Positives = 177/259 (68%), Gaps = 1/259 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L FDSGIGGL V++++R L+ E+ FIYVADD GFPYG W + ALK+R++ +F+++L
Sbjct: 3 ERPLLFFDSGIGGLTVVEEVRALISEFQFIYVADDAGFPYGIWSEDALKQRILKIFTNLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Y P+L VIACNTA TL+ +LR FP++ F+G VPAIK AA T+SGLIS+L+TP T+
Sbjct: 63 KLYNPILCVIACNTASTLVITDLRRKFPNILFVGTVPAIKLAAKKTKSGLISVLATPGTI 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT LI S+ +QCH+ LV S LA E Y G I + E++ EI CF+EK GK T
Sbjct: 123 QRAYTHKLIDSFANQCHVQLVGSTKLAGFAENYLRGNPIDDKELRHEILPCFVEKNGKYT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC-LLPRINTHQTRVFDDHALF 251
DVIVLACTHYP ++++F + + WPV W+D + +IARR R LL I + +D ALF
Sbjct: 183 DVIVLACTHYPFLINLFHKQALWPVSWIDPAKAIARRTRSLLLEEIQNKNIKKHEDCALF 242
Query: 252 LSGKPDIAMRRLMQGFGLK 270
S +A L+Q FG
Sbjct: 243 TSQTIGVATEHLLQKFGFS 261
>gi|163759593|ref|ZP_02166678.1| glutamate racemase [Hoeflea phototrophica DFL-43]
gi|162283190|gb|EDQ33476.1| glutamate racemase [Hoeflea phototrophica DFL-43]
Length = 263
Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats.
Identities = 121/260 (46%), Positives = 182/260 (70%), Gaps = 1/260 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +++FDSGIGGL VL++ R +MP F+YVADD GFPYG WE+ AL+ R++ LF+ ++
Sbjct: 3 ERPVVVFDSGIGGLSVLREARVIMPGRRFVYVADDAGFPYGAWEEGALRDRIVGLFAGLI 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+K+ P L++IACNTA T++ LR+ +P + F+G VPAIK AA T+SGL+S+L+TP T+
Sbjct: 63 EKHNPALALIACNTASTIVMPALRAAYPELPFVGTVPAIKPAAERTKSGLVSVLATPGTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT +LI Y + H+ LV S LA+ E Y + E +K EI+ CF+E++G++T
Sbjct: 123 KRQYTRDLIRDYADKVHVRLVGSENLAALAETYMRKGFVDEAAVKAEIDPCFVERDGQKT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI-NTHQTRVFDDHALF 251
D++VLACTH+P +V+ R+++PWPVDW+D +++IARRA ++ + H D +F
Sbjct: 183 DIVVLACTHFPFLVNRMRKMAPWPVDWIDPAEAIARRALAIVDTLPGGHALPDARDSVVF 242
Query: 252 LSGKPDIAMRRLMQGFGLKS 271
SG PD + RLM GFGL +
Sbjct: 243 TSGNPDYSALRLMHGFGLTA 262
>gi|168334522|ref|ZP_02692683.1| glutamate racemase [Epulopiscium sp. 'N.t. morphotype B']
Length = 267
Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats.
Identities = 56/260 (21%), Positives = 102/260 (39%), Gaps = 7/260 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V++++ + +Y D PYGN + K + L
Sbjct: 3 NRPIGIFDSGLGGLTVVKEVMKQLTNESIVYFGDTARVPYGNKSKSTVTKFSAQII-RFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+IACNT + ELR FP + G V P + A+ T++G I ++ T T
Sbjct: 62 LSKDVKAIIIACNTVNSNCAIELRELFPELMIEGVVGPGVIMASRATKNGRIGVIGTEGT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + + + I + + VE + K I E +
Sbjct: 122 VKSGRYAERLREIHPEYQIFSKACPLFVPLVE----DGWTNTEVAKMVIATYLNELLEED 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYP++ + + + ++ ++ A + L + N + + +
Sbjct: 178 IDTLILGCTHYPILSEDIQAVVGKHIKLINPANETAYQMGLHLLQENIQAVAI-PSYHFY 236
Query: 252 LSGKPDIAMRRLMQGFGLKS 271
+S + G K+
Sbjct: 237 VSDHKEQMQDMAKMFLGCKT 256
>gi|30260986|ref|NP_843363.1| glutamate racemase [Bacillus anthracis str. Ames]
gi|47526136|ref|YP_017485.1| glutamate racemase [Bacillus anthracis str. 'Ames Ancestor']
gi|49183830|ref|YP_027082.1| glutamate racemase [Bacillus anthracis str. Sterne]
gi|65318262|ref|ZP_00391221.1| COG0796: Glutamate racemase [Bacillus anthracis str. A2012]
gi|165871919|ref|ZP_02216561.1| glutamate racemase [Bacillus anthracis str. A0488]
gi|167635884|ref|ZP_02394192.1| glutamate racemase [Bacillus anthracis str. A0442]
gi|167638901|ref|ZP_02397175.1| glutamate racemase [Bacillus anthracis str. A0193]
gi|170687688|ref|ZP_02878904.1| glutamate racemase [Bacillus anthracis str. A0465]
gi|170708261|ref|ZP_02898706.1| glutamate racemase [Bacillus anthracis str. A0389]
gi|177653883|ref|ZP_02935955.1| glutamate racemase [Bacillus anthracis str. A0174]
gi|190566741|ref|ZP_03019658.1| glutamate racemase [Bacillus anthracis Tsiankovskii-I]
gi|227816283|ref|YP_002816292.1| glutamate racemase [Bacillus anthracis str. CDC 684]
gi|229604796|ref|YP_002865427.1| glutamate racemase [Bacillus anthracis str. A0248]
gi|254682956|ref|ZP_05146817.1| glutamate racemase [Bacillus anthracis str. CNEVA-9066]
gi|254734368|ref|ZP_05192081.1| glutamate racemase [Bacillus anthracis str. Western North America
USA6153]
gi|254739982|ref|ZP_05197674.1| glutamate racemase [Bacillus anthracis str. Kruger B]
gi|254753322|ref|ZP_05205358.1| glutamate racemase [Bacillus anthracis str. Vollum]
gi|150261200|pdb|2DWU|A Chain A, Crystal Structure Of Glutamate Racemase Isoform Race1 From
Bacillus Anthracis
gi|150261201|pdb|2DWU|B Chain B, Crystal Structure Of Glutamate Racemase Isoform Race1 From
Bacillus Anthracis
gi|150261202|pdb|2DWU|C Chain C, Crystal Structure Of Glutamate Racemase Isoform Race1 From
Bacillus Anthracis
gi|30254435|gb|AAP24849.1| glutamate racemase [Bacillus anthracis str. Ames]
gi|47501284|gb|AAT29960.1| glutamate racemase [Bacillus anthracis str. 'Ames Ancestor']
gi|49177757|gb|AAT53133.1| glutamate racemase [Bacillus anthracis str. Sterne]
gi|164712350|gb|EDR17885.1| glutamate racemase [Bacillus anthracis str. A0488]
gi|167513031|gb|EDR88403.1| glutamate racemase [Bacillus anthracis str. A0193]
gi|167528701|gb|EDR91460.1| glutamate racemase [Bacillus anthracis str. A0442]
gi|170126782|gb|EDS95664.1| glutamate racemase [Bacillus anthracis str. A0389]
gi|170668501|gb|EDT19248.1| glutamate racemase [Bacillus anthracis str. A0465]
gi|172081111|gb|EDT66188.1| glutamate racemase [Bacillus anthracis str. A0174]
gi|190562293|gb|EDV16261.1| glutamate racemase [Bacillus anthracis Tsiankovskii-I]
gi|227007254|gb|ACP16997.1| glutamate racemase [Bacillus anthracis str. CDC 684]
gi|229269204|gb|ACQ50841.1| glutamate racemase [Bacillus anthracis str. A0248]
Length = 276
Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats.
Identities = 50/255 (19%), Positives = 98/255 (38%), Gaps = 5/255 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + + L ++
Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESICYIGDNERCPYGPRSVEEVQSFVFEMVE-FLKQF 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA L+ P + A T+ G I ++ T T++
Sbjct: 69 PLKALVVACNTAAAATLAALQEALSIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIQSN 128
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+H + +H + LA+ VE + ++++ + + D +
Sbjct: 129 MYEKALHELDTYLKVHSHACPTLATVVE----NRLEDTAYVTQQVKQALLPLTKEDIDTL 184
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYPL+ ++ V + +++ A +L + H F +G
Sbjct: 185 ILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFTTGS 244
Query: 256 PDIAMRRLMQGFGLK 270
+ G +
Sbjct: 245 VSSFEHIAERWLGYQ 259
>gi|15602782|ref|NP_245854.1| glutamate racemase [Pasteurella multocida subsp. multocida str.
Pm70]
gi|13431696|sp|P57887|MURI_PASMU RecName: Full=Glutamate racemase
gi|12721236|gb|AAK03001.1| MurI [Pasteurella multocida subsp. multocida str. Pm70]
Length = 269
Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats.
Identities = 76/264 (28%), Positives = 139/264 (52%), Gaps = 7/264 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
Q +IL FDSG+GG V ++ + L+P+ H++Y D+ FPY + + +R + +
Sbjct: 2 NSPYQPTILFFDSGMGGFSVYKETKQLLPDCHYLYCFDNAFFPYSEKSEEEIIQRTLKIC 61
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
I + L VIACNTA T++ LR+ F ++ +G VPAIK AA +++ I +L+T
Sbjct: 62 QKIDRTFPLDLIVIACNTASTVVLPALRAHF-AIPVVGTVPAIKPAAECSETKHIGLLAT 120
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++R Y ++LI Y C + + S L E+ G + +K+E+
Sbjct: 121 KGTVKRAYVADLIAQYARDCTVEKLGSTKLVEIAEQKLHGKAVDLHALKQELAPWQS--- 177
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
+ D +VL CTH+PLI + P ++D+ +IA R + LL +I+ Q++ + +
Sbjct: 178 IQNLDTVVLGCTHFPLIKEEIKWCLPQVRFFVDSGKAIALRVKTLLSKIDI-QSKTNEKN 236
Query: 249 ALFLSG--KPDIAMRRLMQGFGLK 270
+F + + + ++++ +G +
Sbjct: 237 LIFCTQFFEDETQFQKVIHFWGFE 260
>gi|325263159|ref|ZP_08129894.1| glutamate racemase [Clostridium sp. D5]
gi|324031552|gb|EGB92832.1| glutamate racemase [Clostridium sp. D5]
Length = 277
Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats.
Identities = 58/248 (23%), Positives = 105/248 (42%), Gaps = 8/248 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GGL V+++M +P + +Y D PYG+ + + + + L K
Sbjct: 12 PIGVFDSGVGGLTVVREMIRQLPNENIVYFGDTARVPYGSKSQNTIIRFSEQII-RFLKK 70
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ VIACNTA L D +R F +P + A TQ+ + ++ T AT++
Sbjct: 71 KKVKAIVIACNTASALALDAVRDEFEVPILGVVIPGARAAVEATQNLKVGVVGTDATVQS 130
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ +IH + + + + VEE K+ ++ I +E + D
Sbjct: 131 GMYTKIIHGMNPEITVIEKACPLFVPLVEEGFKEHKVTQEIIDFYLESI----KRTDIDA 186
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR---VFDDHALF 251
++L CTHYPL+ R + ++ + A + LL + + + F
Sbjct: 187 MILGCTHYPLLRSKIRAYMGDGIQIVNPAYETAMDLKKLLKEQDMVNDGQKAPYSRYEFF 246
Query: 252 LSGKPDIA 259
+S +
Sbjct: 247 VSDAAEKF 254
>gi|193214141|ref|YP_001995340.1| glutamate racemase [Chloroherpeton thalassium ATCC 35110]
gi|193087618|gb|ACF12893.1| glutamate racemase [Chloroherpeton thalassium ATCC 35110]
Length = 278
Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats.
Identities = 66/264 (25%), Positives = 109/264 (41%), Gaps = 7/264 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K + I IFDSGIGGL V++K+R +P IY D PYG +++
Sbjct: 11 NLKAERPIGIFDSGIGGLTVVRKIRERLPNERLIYFGDTARVPYGTKSQVTVRRYAAED- 69
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILS 127
+ +L KYQP + V+ACNT L D + + LG + A A Y+Q+ I ++
Sbjct: 70 TRLLLKYQPKMIVVACNTVSALALDVVEHESGGLPVLGVLKAGANLAVKYSQTKHIGVIG 129
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT+ I + ++ + + E I K E
Sbjct: 130 TIATISSNAYPLEISKLDCEAEVYSKACPLFVPLAE----EGFISHQATKLIATEYLTEL 185
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
K+ D +VL CTHYP++ + +++ V +D+++++A LL + +
Sbjct: 186 LVKKIDSLVLGCTHYPILKSMLAEVTGKNVVIIDSAEAVAMEVENLLREKSLLNREINQA 245
Query: 248 H-ALFLSGKPDIAMRRLMQGFGLK 270
+ +S P GL
Sbjct: 246 LPKVLVSDLPQKFKTMFELFLGLS 269
>gi|324324893|gb|ADY20153.1| glutamate racemase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 276
Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats.
Identities = 50/255 (19%), Positives = 98/255 (38%), Gaps = 5/255 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + + L ++
Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFVFEMVE-FLKQF 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA L+ P + A T+ G I ++ T T++
Sbjct: 69 PLKALVVACNTAAAAALTALQEALSIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIKSN 128
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+H + +H + LA+ VE + ++++ + + D +
Sbjct: 129 MYEKALHELDTYLKVHSHACPTLATVVENQLE----DTAYVTQQVKQALLPLMKENIDTL 184
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYPL+ ++ V + +++ A +L + +H F +G
Sbjct: 185 ILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPEHRFFTTGS 244
Query: 256 PDIAMRRLMQGFGLK 270
+ G
Sbjct: 245 ALSFEHIAERWLGYH 259
>gi|304398949|ref|ZP_07380818.1| glutamate racemase [Pantoea sp. aB]
gi|304353409|gb|EFM17787.1| glutamate racemase [Pantoea sp. aB]
Length = 283
Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats.
Identities = 82/261 (31%), Positives = 140/261 (53%), Gaps = 4/261 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
L+ ++L+FDSG+GGL V ++R L+P+ H++Y D+ GFPYG + + +R++ +
Sbjct: 18 SDLRPTVLVFDSGVGGLSVYDEVRQLLPDLHYLYAFDNAGFPYGEKSETFIVERVVAIVE 77
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
I +Y L +IACNTA T+ LR F + +G VPAIK AA T++G++ +L+T
Sbjct: 78 AITQRYPLSLVIIACNTASTVSLPALRERF-AFPVVGVVPAIKPAARLTRNGVVGLLATR 136
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+RR YT L+ + C+I ++ S L E G ++ DE+++ ++
Sbjct: 137 ATVRRPYTHELVAQFAGSCNIEMLGSAELVELAEAKLHGAEVALDEVRRIVQPWLRM--A 194
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+ D +VL CTH+PL+ +Q+ P +D+ +IARR LL + A
Sbjct: 195 EPPDTVVLGCTHFPLLREELQQVLPEGTRLIDSGAAIARRTAWLLEHEAPEVNSSQQNVA 254
Query: 250 LFLSGKPDI-AMRRLMQGFGL 269
+ + + ++Q +G
Sbjct: 255 FCTALDGEAVQLSPVLQRYGF 275
>gi|206975573|ref|ZP_03236485.1| glutamate racemase [Bacillus cereus H3081.97]
gi|222094594|ref|YP_002528654.1| glutamate racemase [Bacillus cereus Q1]
gi|206746035|gb|EDZ57430.1| glutamate racemase [Bacillus cereus H3081.97]
gi|221238652|gb|ACM11362.1| glutamate racemase [Bacillus cereus Q1]
Length = 276
Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats.
Identities = 50/255 (19%), Positives = 98/255 (38%), Gaps = 5/255 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + + L ++
Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFVFEMVE-FLKQF 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA L+ P + A T+ G I ++ T T++
Sbjct: 69 PLKALVVACNTAAAAALTALQEALSIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIKSN 128
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+H + +H + LA+ VE + ++++ + + D +
Sbjct: 129 MYEKALHELDTYLKVHSHACPTLATVVENQLE----DTAYVTEQVKQALLPLTKEDIDTL 184
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYPL+ ++ V + +++ A +L + +H F +G
Sbjct: 185 ILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPEHRFFTTGS 244
Query: 256 PDIAMRRLMQGFGLK 270
+ G
Sbjct: 245 ALSFEHIAERWLGYH 259
>gi|254758420|ref|ZP_05210447.1| glutamate racemase [Bacillus anthracis str. Australia 94]
Length = 276
Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats.
Identities = 50/255 (19%), Positives = 98/255 (38%), Gaps = 5/255 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + + L ++
Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESICYIGDNERCPYGPRSVEEVQSFVFEMVE-FLKQF 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA L+ P + A T+ G I ++ T T++
Sbjct: 69 PLKALVVACNTAAAATLAALQEALSIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIQSN 128
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+H + +H + LA+ VE + ++++ + + D +
Sbjct: 129 MYEKALHELDTYLKVHSHACPTLATVVE----NRLEDTAYVTQQVKQALLPLTKEDIDTL 184
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYPL+ ++ V + +++ A +L + H F +G
Sbjct: 185 ILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSAILQHKGILADNLNPKHRFFTTGS 244
Query: 256 PDIAMRRLMQGFGLK 270
+ G +
Sbjct: 245 VSSFEHIAERWLGYQ 259
>gi|254264436|ref|ZP_04955301.1| glutamate racemase [Burkholderia pseudomallei 1710a]
gi|254215438|gb|EET04823.1| glutamate racemase [Burkholderia pseudomallei 1710a]
Length = 302
Score = 231 bits (588), Expect = 1e-58, Method: Composition-based stats.
Identities = 65/262 (24%), Positives = 108/262 (41%), Gaps = 9/262 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D + +R + + + L
Sbjct: 27 RAPIGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDVFIVERTLAI-GEWL 85
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
V+ACNTA +R P + +G P IK AA ++++ + +L+T ATL
Sbjct: 86 VAQGAKALVVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQATL 144
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R L+ + + C L +E G ++ +
Sbjct: 145 RSARFEALLARHAADCRFLCQPGHGLVEAIERGDTG----SPALRALLASYLEPMLEAGA 200
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ---TRVFDDHA 249
D +VL CTHYP + R ++ + +D D+IAR+ +L R
Sbjct: 201 DTLVLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIARQLARVLDERGLRAPASPRPAPLPR 260
Query: 250 LFLSGKPDIAMRRLMQGFGLKS 271
+ GL +
Sbjct: 261 FCSTSDGRQLQALAATLLGLDA 282
>gi|300703743|ref|YP_003745345.1| glutamate racemase [Ralstonia solanacearum CFBP2957]
gi|299071406|emb|CBJ42725.1| Glutamate racemase [Ralstonia solanacearum CFBP2957]
Length = 277
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 104/258 (40%), Gaps = 6/258 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + +R + +
Sbjct: 4 RAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKSPEFIAERTLRVCE- 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L VIACNTA LR ++ +G P +K A A +QS ++ +L+T +
Sbjct: 63 WLVGQGCKALVIACNTATAQAVHLLRERL-AVPVIGVEPGLKPAVATSQSRVVGVLATES 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TLR + L+ + C + L +E + + ++
Sbjct: 122 TLRSDKFARLLGNVSGDCQVLCQPGYGLVPLIERGDT----HSPAVLELLQAHLQPMLDA 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D +VL CTHYP + ++++ + +D ++AR L +
Sbjct: 178 GADTLVLGCTHYPFLRDAIQEIAGERLALIDTGHAVARHLGRTLAAAHLQAAGAAASPRF 237
Query: 251 FLSGKPDIAMRRLMQGFG 268
+G + G
Sbjct: 238 LSTGDVLPLQAMVAALLG 255
>gi|15673264|ref|NP_267438.1| glutamate racemase [Lactococcus lactis subsp. lactis Il1403]
gi|13878595|sp|Q9CG28|MURI_LACLA RecName: Full=Glutamate racemase
gi|12724258|gb|AAK05380.1|AE006360_9 glutamate racemase [Lactococcus lactis subsp. lactis Il1403]
Length = 271
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 50/258 (19%), Positives = 101/258 (39%), Gaps = 7/258 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I + DSG+GGL V +++ +P +Y+ D PYG + + + L
Sbjct: 3 NRPIGLLDSGVGGLTVARELLRQLPNEEIVYIGDTRRAPYGPRSREQIIAFTWDMVN-FL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA + + ++ +P A T++ I +++T A++
Sbjct: 62 LSKDVKMIVMACNTATAMALEIVKEKLDIPVIGVILPGASSAIQKTKTNKIGVIATQASI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R I S ++ ++ S VE ++ + +K + + GK
Sbjct: 122 RSDEYHKTIARKSSAVEVYSLACPKFVSIVESNE----MESEIARKVVSESLVPLIGK-V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALF 251
D ++L CTHYPL+ + ++ V +D+ R LL + + +H +
Sbjct: 177 DTLILGCTHYPLLRSLIQETMGKEVRLIDSGAEAVRDISVLLNYFSINGQERQPLEHRFY 236
Query: 252 LSGKPDIAMRRLMQGFGL 269
+ + + +
Sbjct: 237 TTAGVNSFREIAEKWLNI 254
>gi|294789006|ref|ZP_06754246.1| glutamate racemase [Simonsiella muelleri ATCC 29453]
gi|294483108|gb|EFG30795.1| glutamate racemase [Simonsiella muelleri ATCC 29453]
Length = 272
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 56/262 (21%), Positives = 111/262 (42%), Gaps = 8/262 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ I +FDSG+GGL V++ + +P + +Y D PYG + +++ +
Sbjct: 7 NNEKPIGVFDSGVGGLTVVRALMERLPNENIVYFGDTARVPYGVKSRNTIEEFTAQIVE- 65
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTP 129
L + + VIACNT + ++ +M + + A + A A T++ I +++T
Sbjct: 66 FLLQNEVKALVIACNTIAAVAYKRVQQMVGNMPIISVIEAGAQAALATTRNNHIGVIATS 125
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ + IH+ I +S IL VE + + + +
Sbjct: 126 TTVNSNAYARAIHAQNPDTRILSQASPILVPLVE----EGWLDHEVTRLTVREYLKPILA 181
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC-LLPRINTHQTRVFDDH 248
+ D +VL CTHYPL+ + ++ + ++ +D+S + A LL + ++ D+
Sbjct: 182 EDVDTLVLGCTHYPLLKPLIKKEA-NTLELVDSSITTAEATAQALLDAHLLNTSQQMPDY 240
Query: 249 ALFLSGKPDIAMRRLMQGFGLK 270
++S P + G
Sbjct: 241 RFYVSDIPLRFQTIGERFLGRS 262
>gi|59801838|ref|YP_208550.1| glutamate racemase [Neisseria gonorrhoeae FA 1090]
gi|239999567|ref|ZP_04719491.1| glutamate racemase [Neisseria gonorrhoeae 35/02]
gi|240014744|ref|ZP_04721657.1| glutamate racemase [Neisseria gonorrhoeae DGI18]
gi|240017192|ref|ZP_04723732.1| glutamate racemase [Neisseria gonorrhoeae FA6140]
gi|240081170|ref|ZP_04725713.1| glutamate racemase [Neisseria gonorrhoeae FA19]
gi|240113384|ref|ZP_04727874.1| glutamate racemase [Neisseria gonorrhoeae MS11]
gi|240116270|ref|ZP_04730332.1| glutamate racemase [Neisseria gonorrhoeae PID18]
gi|240118556|ref|ZP_04732618.1| glutamate racemase [Neisseria gonorrhoeae PID1]
gi|240121267|ref|ZP_04734229.1| glutamate racemase [Neisseria gonorrhoeae PID24-1]
gi|240124100|ref|ZP_04737056.1| glutamate racemase [Neisseria gonorrhoeae PID332]
gi|240126283|ref|ZP_04739169.1| glutamate racemase [Neisseria gonorrhoeae SK-92-679]
gi|254494283|ref|ZP_05107454.1| glutamate racemase [Neisseria gonorrhoeae 1291]
gi|260439916|ref|ZP_05793732.1| glutamate racemase [Neisseria gonorrhoeae DGI2]
gi|268595380|ref|ZP_06129547.1| glutamate racemase [Neisseria gonorrhoeae 35/02]
gi|268597280|ref|ZP_06131447.1| glutamate racemase [Neisseria gonorrhoeae FA19]
gi|268599457|ref|ZP_06133624.1| glutamate racemase [Neisseria gonorrhoeae MS11]
gi|268601935|ref|ZP_06136102.1| glutamate racemase [Neisseria gonorrhoeae PID18]
gi|268604265|ref|ZP_06138432.1| glutamate racemase [Neisseria gonorrhoeae PID1]
gi|268682724|ref|ZP_06149586.1| glutamate racemase [Neisseria gonorrhoeae PID332]
gi|268684866|ref|ZP_06151728.1| glutamate racemase [Neisseria gonorrhoeae SK-92-679]
gi|75432415|sp|Q5F6P9|MURI_NEIG1 RecName: Full=Glutamate racemase
gi|59718733|gb|AAW90138.1| putative glutamate racemase [Neisseria gonorrhoeae FA 1090]
gi|226513323|gb|EEH62668.1| glutamate racemase [Neisseria gonorrhoeae 1291]
gi|268548769|gb|EEZ44187.1| glutamate racemase [Neisseria gonorrhoeae 35/02]
gi|268551068|gb|EEZ46087.1| glutamate racemase [Neisseria gonorrhoeae FA19]
gi|268583588|gb|EEZ48264.1| glutamate racemase [Neisseria gonorrhoeae MS11]
gi|268586066|gb|EEZ50742.1| glutamate racemase [Neisseria gonorrhoeae PID18]
gi|268588396|gb|EEZ53072.1| glutamate racemase [Neisseria gonorrhoeae PID1]
gi|268623008|gb|EEZ55408.1| glutamate racemase [Neisseria gonorrhoeae PID332]
gi|268625150|gb|EEZ57550.1| glutamate racemase [Neisseria gonorrhoeae SK-92-679]
Length = 270
Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 105/258 (40%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + L
Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVD-FL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 66 LGHDVKAMVIACNTIAAVAGRKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VE ++ + + +
Sbjct: 126 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVE----EGWLEHEVTRLTVCEYLKPLLADG 181
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 182 IDTLVLGCTHFPLLKPLIGREAH-NVALVDSAITTAEETARVLAQEGLLDTGNNNPDYRF 240
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 241 YVSDIPLKFRTIGERFLG 258
>gi|262037470|ref|ZP_06010930.1| glutamate racemase [Leptotrichia goodfellowii F0264]
gi|261748505|gb|EEY35884.1| glutamate racemase [Leptotrichia goodfellowii F0264]
Length = 261
Score = 230 bits (587), Expect = 2e-58, Method: Composition-based stats.
Identities = 58/254 (22%), Positives = 109/254 (42%), Gaps = 9/254 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL VL+++R ++P Y+ D PYG + + + ++ L +
Sbjct: 3 IGIFDSGVGGLTVLKEIRKVLPNEKIYYLGDTARVPYGEKTKELIVRYSKQI-TEFLLEQ 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA +L +EL+ TF +K A T++ I ++ T AT+
Sbjct: 62 NVDAIVVACNTATSLALEELKETFRVPIIGVVDAGVKTALYTTKNNKIGVIGTKATINSR 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
I + S ++ S + +EE +I + +K ++ ++ D +
Sbjct: 122 KYETEIKNKNSAIEVYSKSCPLFVPVIEEGITKGEIVDLVVKMYLDEF-----KEKIDSL 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHALFLS 253
+L CTHYPL+ + L P ++ +D + A + +L N + + +++
Sbjct: 177 ILGCTHYPLLKETIKNLYP-NIEIVDPAKETAEDLKKILTDNNLMKNDGEKGKEVRYYVT 235
Query: 254 GKPDIAMRRLMQGF 267
+
Sbjct: 236 DGQEKFKEIGTMFL 249
>gi|194099309|ref|YP_002002407.1| glutamate racemase [Neisseria gonorrhoeae NCCP11945]
gi|193934599|gb|ACF30423.1| glutamate racemase [Neisseria gonorrhoeae NCCP11945]
Length = 326
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 105/258 (40%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + L
Sbjct: 63 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVD-FL 121
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 122 LGHDVKAMVIACNTIAAVAGRKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 181
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VE ++ + + +
Sbjct: 182 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVE----EGWLEHEVTRLTVCEYLKPLLADG 237
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 238 IDTLVLGCTHFPLLKPLIGREAH-NVALVDSAITTAEETARVLAQEGLLDTGNNNPDYRF 296
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 297 YVSDIPLKFRTIGERFLG 314
>gi|313898081|ref|ZP_07831620.1| glutamate racemase [Clostridium sp. HGF2]
gi|312957109|gb|EFR38738.1| glutamate racemase [Clostridium sp. HGF2]
Length = 259
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 63/261 (24%), Positives = 108/261 (41%), Gaps = 6/261 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ +I +FDSG+GG+ VL+++R LMP+ ++Y D PYG + KR +
Sbjct: 1 MSSIDKAIGVFDSGLGGISVLKELRSLMPQEDYLYYGDSSFAPYGVKTKEEITKRCRSIC 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ + VIACNTA + ELR+ +P + +G PA+K A + +L+T
Sbjct: 61 AFFI-SQGVKAVVIACNTATSACVKELRTLYPDLPIVGMEPALKPAVDGRHQQHVLVLAT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
TL+ L+ + I+ L VE G E + + +
Sbjct: 120 QFTLKEKKFEQLMSRFDEDNTIYRQPCPKLVELVE---AGRLEDEAAVNSALREYLKPYD 176
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRVFD 246
+R D IVL CTH+ R L + +D + AR + LL +
Sbjct: 177 MERMDSIVLGCTHFVFYRSQLRNLIGDHIALVDGNAGTARHVQELLQERGVCRKPSSAAG 236
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ ++ S + ++ +
Sbjct: 237 EVRIYNSLNKEAILKLSRELL 257
>gi|317486144|ref|ZP_07944988.1| Asp/Glu/Hydantoin racemase [Bilophila wadsworthia 3_1_6]
gi|316922593|gb|EFV43835.1| Asp/Glu/Hydantoin racemase [Bilophila wadsworthia 3_1_6]
Length = 296
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 66/258 (25%), Positives = 111/258 (43%), Gaps = 6/258 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL VL MR LMP ++++ D PYG + + + + L
Sbjct: 10 QLPIGLFDSGVGGLTVLDAMRRLMPGEDYLFLGDTARVPYGAKSQKTIVRYSLQAAAK-L 68
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
+ L VIACNTA LR T+P M +G + P + A + SG I++++T +T
Sbjct: 69 IGQRIKLLVIACNTATAAALPALRETWPDMPIIGVIEPGSRAACEASPSGDIAVIATEST 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R + I + + ++ + EE I E + + +E F +
Sbjct: 129 IRSGAYAEAILRRRPEAQVRSLACPLFVPLAEEGWFDGPIAEGVVSRYLEPLFE--KSPA 186
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV--FDDHA 249
D +VL CTHYP++ R++ V +D++ + A + L +
Sbjct: 187 PDCLVLGCTHYPMLAAAIRKVVGPEVHIVDSAATTAEVVKRRLADKGLAHPQAGRTGRIR 246
Query: 250 LFLSGKPDIAMRRLMQGF 267
F++ P R
Sbjct: 247 FFITDDPQRFTRTGSLFL 264
>gi|293398523|ref|ZP_06642701.1| glutamate racemase [Neisseria gonorrhoeae F62]
gi|291610994|gb|EFF40091.1| glutamate racemase [Neisseria gonorrhoeae F62]
Length = 326
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 105/258 (40%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + L
Sbjct: 63 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVD-FL 121
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 122 LGHDVKAMVIACNTIAAVAGRKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 181
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VE ++ + + +
Sbjct: 182 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVE----EGWLEHEVTRLTVCEYLKPLLADG 237
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 238 IDTLVLGCTHFPLLKPLIGREAH-NVALVDSAITTAEETARVLAQEGLLDTGNNNPDYRF 296
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 297 YVSDIPLKFRTIGERFLG 314
>gi|291043190|ref|ZP_06568913.1| glutamate racemase [Neisseria gonorrhoeae DGI2]
gi|291012796|gb|EFE04779.1| glutamate racemase [Neisseria gonorrhoeae DGI2]
Length = 285
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 105/258 (40%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + L
Sbjct: 22 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVD-FL 80
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 81 LGHDVKAMVIACNTIAAVAGRKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 140
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VE ++ + + +
Sbjct: 141 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVE----EGWLEHEVTRLTVCEYLKPLLADG 196
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 197 IDTLVLGCTHFPLLKPLIGREAH-NVALVDSAITTAEETARVLAQEGLLDTGNNNPDYRF 255
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 256 YVSDIPLKFRTIGERFLG 273
>gi|182624295|ref|ZP_02952080.1| glutamate racemase [Clostridium perfringens D str. JGS1721]
gi|177910513|gb|EDT72886.1| glutamate racemase [Clostridium perfringens D str. JGS1721]
Length = 260
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 6/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I FDSG+GGL VL+K +MP ++IY D PYG ++ F + L
Sbjct: 7 NAPIGFFDSGLGGLSVLRKALEMMPNENYIYYGDSKHAPYGEKTPQEIRSLS-FNAIEFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K VIACNTA + +LR + + +G PA+K A ++G + +++T ATL
Sbjct: 66 IKKGAKAIVIACNTATSAAAHDLREYYKDIPIIGIEPALKPAIKLHETGSVIVMATKATL 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ NL+ Y + + L +E ++ +++K + +
Sbjct: 126 NQEKFKNLMDKYGEHREVISLPCPGLVEFIE----AGDLEGEDVKNFLREKLNPYMDREI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHALF 251
IVL CTHYP + V + + VD +D S R + L N +++ + +F
Sbjct: 182 SSIVLGCTHYPFVKDVIQDIVGEKVDIIDGSSGTVRELKRRLEENNMESESKKKGNLDIF 241
Query: 252 LSGKPDIAMRRLMQGFGLK 270
S + + + +K
Sbjct: 242 NSLEDKKILELSKKLIEIK 260
>gi|163786500|ref|ZP_02180948.1| glutamate racemase [Flavobacteriales bacterium ALC-1]
gi|159878360|gb|EDP72416.1| glutamate racemase [Flavobacteriales bacterium ALC-1]
Length = 261
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 72/260 (27%), Positives = 122/260 (46%), Gaps = 7/260 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ I IFDSGIGG + +++ L+P + IY+AD PYGN + + + +
Sbjct: 1 MSNTKKPIGIFDSGIGGTSIFKEIIALLPNENCIYLADSKNAPYGNKSEADILQLSIKN- 59
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+++L L V+ACNTA T LR+ + ++F+G PAIK AA TQS I IL+T
Sbjct: 60 TELLISKGCKLIVVACNTATTNAISYLRANY-DVSFIGIEPAIKPAALNTQSKSIGILAT 118
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
TL Y + + +E ++ DE+KK +E
Sbjct: 119 KGTLSSHLFHKTTDLYTDGIKVIEQVGEGIVPLIETGL----LESDEMKKLLETYLEPML 174
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDD 247
+ D +VL CTHYP ++ + +++ P V +D+ ++A++ + +L + +
Sbjct: 175 KQNIDYLVLGCTHYPYLIPMLKKMLPEHVKIIDSGLAVAKQTQAVLATNSLLNTSNAQPA 234
Query: 248 HALFLSGKPDIAMRRLMQGF 267
L+ +G D+ L F
Sbjct: 235 INLYSNGDVDVLNSILENEF 254
>gi|300780581|ref|ZP_07090436.1| glutamate racemase [Corynebacterium genitalium ATCC 33030]
gi|300533567|gb|EFK54627.1| glutamate racemase [Corynebacterium genitalium ATCC 33030]
Length = 284
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 99/258 (38%), Gaps = 7/258 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I IFDSG GGL V + + +P IY+ D PYG ++ M + D
Sbjct: 17 NNAPIGIFDSGFGGLTVARSVMDQLPGESVIYIGDGANGPYGPKPLAEVRGHAMAIADD- 75
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + + VIACNTA + R + PA+++A A T++G + ++ T AT
Sbjct: 76 LVERGCKMIVIACNTASAAFLHDARERYSVPVIEVIKPAVRRAVATTRNGKVGVIGTQAT 135
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R +L + VE + ++ +G +
Sbjct: 136 IRSGVYQDLFSL-APGIEATAAACPAFVEFVEAGVTHGR----QVLGVAQGYVEPLQAAG 190
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTHYPL+ V + V + +++ A+ +L +
Sbjct: 191 VDTLVLGCTHYPLLSGVIQLAIGDDVTLVSSAEETAKDVLRILTERDMFADVDHEPARTF 250
Query: 251 FLSGKPDIAMRRLMQGFG 268
+G P+ R + G
Sbjct: 251 ESTGDPEPFHRLGPRFLG 268
>gi|254725743|ref|ZP_05187525.1| glutamate racemase [Bacillus anthracis str. A1055]
Length = 276
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 50/255 (19%), Positives = 97/255 (38%), Gaps = 5/255 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + + L ++
Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESICYIGDNERCPYGPRSVEEVQSFVFEMVE-FLKQF 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA L+ P + A T+ G I ++ T T++
Sbjct: 69 PLKALVVACNTAAAATLAALQEALSIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIQSN 128
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+H + +H + LA+ VE + ++++ + + D +
Sbjct: 129 MYEKALHELDTYLKVHSHACPTLATVVE----NRLEDTAYVTQQVKQALLPLTKEDIDTL 184
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYPL+ ++ V + +++ A L + H F +G
Sbjct: 185 ILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTFLQHKGILADNLNPKHRFFTTGS 244
Query: 256 PDIAMRRLMQGFGLK 270
+ G +
Sbjct: 245 VSSFEHIAERWLGYQ 259
>gi|240128767|ref|ZP_04741428.1| glutamate racemase [Neisseria gonorrhoeae SK-93-1035]
gi|268687151|ref|ZP_06154013.1| glutamate racemase [Neisseria gonorrhoeae SK-93-1035]
gi|268627435|gb|EEZ59835.1| glutamate racemase [Neisseria gonorrhoeae SK-93-1035]
Length = 270
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 105/258 (40%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + L
Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVD-FL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 66 LGHDVKAMVIACNTIAAVAGRKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VE ++ + + +
Sbjct: 126 VNSNAYARAIHRDNPDTLVRTQAAPLLVPLVE----EGWLEHEVTRLTVCEYLKPLLADG 181
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 182 IDTLVLGCTHFPLLKPLIGREAH-NVALVDSAITTAEETARVLAQEGLLGTGNNNPDYRF 240
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 241 YVSDIPLKFRTIGERFLG 258
>gi|258515013|ref|YP_003191235.1| glutamate racemase [Desulfotomaculum acetoxidans DSM 771]
gi|257778718|gb|ACV62612.1| glutamate racemase [Desulfotomaculum acetoxidans DSM 771]
Length = 266
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 64/253 (25%), Positives = 115/253 (45%), Gaps = 6/253 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I +FDSG+GGL +++++R L+PE IY AD PYG ++ R + +L +
Sbjct: 6 AIGLFDSGVGGLSIMKEVRKLLPEEDLIYFADSAYCPYGIKTPEVIRARCFSICDFLLKE 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L V+A NT D +R + + +G PAIK AA +++G I IL+T T+
Sbjct: 66 -GVKLIVVASNTTSVAGLDLIRKHY-RIPIVGVEPAIKPAAELSRNGKIGILATGVTING 123
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
S+L+ + S + L VE K+ + + + +D
Sbjct: 124 ERFSSLVERFGSNIEVFTQPCPGLVELVE----EGKLDCPQTEALLHRYMDPMLVHGSDT 179
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
IVL CTHYP + + +++ + +D +++AR+ ++ +N T + SG
Sbjct: 180 IVLGCTHYPFLRSLVEKIAGPQITVIDTGEAVARQVSRIVNTLNQISTGKQGKEIFYTSG 239
Query: 255 KPDIAMRRLMQGF 267
+ + +
Sbjct: 240 STAKVTPIIQELW 252
>gi|298345217|ref|YP_003717904.1| glutamate racemase [Mobiluncus curtisii ATCC 43063]
gi|298235278|gb|ADI66410.1| glutamate racemase [Mobiluncus curtisii ATCC 43063]
Length = 269
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 58/265 (21%), Positives = 96/265 (36%), Gaps = 14/265 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I IFDSG+GGL V + + +P IY+ D PYG +K+ + +
Sbjct: 2 NNAPIGIFDSGLGGLTVARSIIDQLPGESVIYIGDTANSPYGTKPVERVKELSLSVMDK- 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL---GAVPAIKQAAAYTQSGLISILST 128
L + VIACNTA RS + + PA+ +A + T++G I +++T
Sbjct: 61 LVDRGVKMLVIACNTASATAVFAARSKYDELGIPVLEVISPAVHRAVSATRNGHIGVIAT 120
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+ +H+Y Q + + VE E+
Sbjct: 121 HTTIETETYQRALHAY-QQVQVSAKACPAFVDFVERGITSG----PELLAVAREYLEPIR 175
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV---- 244
D +VL CTHYPL+ + + V + +++ A L + T
Sbjct: 176 DAGVDTLVLGCTHYPLLSGIISYVMGPEVTLVSSAEETAHDVYRQLLDKDWLNTDDGTDT 235
Query: 245 -FDDHALFLSGKPDIAMRRLMQGFG 268
+ +G R + G
Sbjct: 236 VNPRYQFLATGDTQTFTRLARRFLG 260
>gi|315655639|ref|ZP_07908537.1| glutamate racemase [Mobiluncus curtisii ATCC 51333]
gi|315489703|gb|EFU79330.1| glutamate racemase [Mobiluncus curtisii ATCC 51333]
Length = 271
Score = 229 bits (585), Expect = 3e-58, Method: Composition-based stats.
Identities = 59/265 (22%), Positives = 96/265 (36%), Gaps = 14/265 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I IFDSG+GGL V + + +P IY+ D PYG +K+ + +
Sbjct: 4 NNAPIGIFDSGLGGLTVARSIIDQLPGESVIYIGDTANSPYGTKPVERVKELSLSVMDK- 62
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL---GAVPAIKQAAAYTQSGLISILST 128
L + VIACNTA RS + + PA+ +A + T++G I +++T
Sbjct: 63 LVDRGVKMLVIACNTASATAVFAARSKYDELGIPVLEVISPAVHRAVSATRNGHIGVIAT 122
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+ +H+Y Q + + VE E+
Sbjct: 123 HTTIETETYQRALHAY-QQVQVSAKACPAFVDFVERGITSG----PELLAVAREYLDPIR 177
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV---- 244
D +VL CTHYPL+ V + V + +++ A L + T
Sbjct: 178 DAGVDTLVLGCTHYPLLSGVISYVMGPEVTLVSSAEETAHDVYRQLLDKDWLNTDDGTDT 237
Query: 245 -FDDHALFLSGKPDIAMRRLMQGFG 268
+ +G R + G
Sbjct: 238 VNPRYQFLATGDTQTFTRLARRFLG 262
>gi|326773725|ref|ZP_08233008.1| glutamate racemase [Actinomyces viscosus C505]
gi|326636955|gb|EGE37858.1| glutamate racemase [Actinomyces viscosus C505]
Length = 294
Score = 229 bits (585), Expect = 3e-58, Method: Composition-based stats.
Identities = 55/263 (20%), Positives = 97/263 (36%), Gaps = 12/263 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I +FDSG+GGL V + + +P +Y+ D PYG + ++ + + +
Sbjct: 2 NDAPIGMFDSGVGGLTVARSVLDQLPHEQVLYIGDTANSPYGPRDIAEVRSLALGIMDE- 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFP----SMAFLGAVPAIKQAAAYTQSGLISILS 127
L L VIACNTA + + R + PA + AA T++G + +++
Sbjct: 61 LVDRGVKLLVIACNTASAAVLHDARERYTLGRGVPVIEVIHPAARTAARVTRNGKVGLIA 120
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+ + + + + + E E+ E
Sbjct: 121 TRGTVDSRAYDDALQAV-PGVELVSQACPRFVELAERGVT----TGPEVLDVAEEYLAPI 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245
+ D ++L CTHYPL+V + V + +SD A+ L N +
Sbjct: 176 KAAGVDTLILGCTHYPLLVGPISYVMGRDVTLVTSSDETAKDVYRALAGKNLLRGPEAPE 235
Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268
H +G P+ + G
Sbjct: 236 PRHDFASTGDPEAFSVLARRFLG 258
>gi|255534473|ref|YP_003094844.1| Glutamate racemase [Flavobacteriaceae bacterium 3519-10]
gi|255340669|gb|ACU06782.1| Glutamate racemase [Flavobacteriaceae bacterium 3519-10]
Length = 282
Score = 229 bits (585), Expect = 3e-58, Method: Composition-based stats.
Identities = 57/258 (22%), Positives = 105/258 (40%), Gaps = 7/258 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V ++++ L+P + IY D PYG A+ + + L
Sbjct: 20 DQPIGIFDSGVGGLTVAKEIKRLLPNENLIYFGDTKHLPYGEKSRDAIVGYSTKI-TRFL 78
Query: 73 DKYQPVLSVIACNTAFTLIKDE-LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ VIACN+A E L + + + + + AY + +++T AT
Sbjct: 79 LEKNCKAIVIACNSATANALKEVLDEVADRVPVIDVINPVAEKVAYEIHNNVGVIATKAT 138
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ I + + +++ +L +EE I + + K
Sbjct: 139 VNSGLYRKSIRKHNKFIKVDELATPLLVPAIEEGFKNHPITHSIVY----NYLSNNKLKN 194
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-HAL 250
+ ++L CTHYPL++ RQ V +D+ +A + R +L + + + +
Sbjct: 195 IETLILGCTHYPLLIDEIRQYYGNRVRVIDSPGIVANQLRIILDKHQLLNAKNSNTAYQF 254
Query: 251 FLSGKPDIAMRRLMQGFG 268
+LS + + FG
Sbjct: 255 YLSDLTKNFEKISKKFFG 272
>gi|229074552|ref|ZP_04207581.1| Glutamate racemase [Bacillus cereus Rock4-18]
gi|228708672|gb|EEL60816.1| Glutamate racemase [Bacillus cereus Rock4-18]
Length = 275
Score = 229 bits (585), Expect = 3e-58, Method: Composition-based stats.
Identities = 50/255 (19%), Positives = 98/255 (38%), Gaps = 5/255 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + + L ++
Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVKEVQSFVFEMVE-FLKQF 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA L+ P + A T+ G I ++ T T++
Sbjct: 69 PLKALVVACNTAAAAALTALQEALSIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIQSN 128
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+H + +H + LA+ VE + ++++ + + D +
Sbjct: 129 MYEKALHELDTYLEVHSHACPTLATVVENQLE----DTAYVTQQVKQALLPLTKEDIDTL 184
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYPL+ ++ V + +++ A +L + H F +G
Sbjct: 185 ILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTGS 244
Query: 256 PDIAMRRLMQGFGLK 270
+ G +
Sbjct: 245 VLSFEHIAERWLGYE 259
>gi|146299447|ref|YP_001194038.1| glutamate racemase [Flavobacterium johnsoniae UW101]
gi|146153865|gb|ABQ04719.1| glutamate racemase [Flavobacterium johnsoniae UW101]
Length = 259
Score = 229 bits (585), Expect = 3e-58, Method: Composition-based stats.
Identities = 64/259 (24%), Positives = 110/259 (42%), Gaps = 8/259 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
N I +FDSGIGG + + L+P IY+AD PYG +
Sbjct: 1 MTNNNPIGVFDSGIGGTSIWSAIHDLLPNEKTIYLADSKNAPYGQKTKEEIVALSKKNVE 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L + L V+ACNTA T ELR+ + + F+G PAIK AA +++ +I IL+T
Sbjct: 61 -FLLENNCKLIVVACNTATTNAIRELRNDY-DIPFIGIEPAIKPAATNSRTQVIGILATK 118
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
TL + I L +E + E+ + +E
Sbjct: 119 GTLNSELFNKT-AEMFQHTTIIEQVGYGLVQLIE----DGNLNSPEMTQLLESYLQPMID 173
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQTRVFDDH 248
D +VL C+HYP ++ +++ P + +D+ +++AR+ + +L + + D
Sbjct: 174 ANIDYLVLGCSHYPYLIPQIKKILPDHIQIIDSGEAVARQTQNVLREKAGFTDGKNNSDP 233
Query: 249 ALFLSGKPDIAMRRLMQGF 267
+++ P + L +
Sbjct: 234 VFYVNSNPAVLKSILENKY 252
>gi|229195184|ref|ZP_04321959.1| Glutamate racemase [Bacillus cereus m1293]
gi|228588413|gb|EEK46456.1| Glutamate racemase [Bacillus cereus m1293]
Length = 284
Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats.
Identities = 50/255 (19%), Positives = 97/255 (38%), Gaps = 5/255 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + + L ++
Sbjct: 18 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFVFEMVE-FLKQF 76
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA L+ P + A T+ G I ++ T T++
Sbjct: 77 PLKALVVACNTAAAAALAALQEALSVPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIKSN 136
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+H + +H + LA+ VE + ++++ + + D +
Sbjct: 137 MYEKALHELDTYLEVHSHACPTLATVVENQLE----DTAYVTEQVKQALLPLTEEDIDTL 192
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYPL+ ++ V + +++ A +L + H F +G
Sbjct: 193 ILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFTTGS 252
Query: 256 PDIAMRRLMQGFGLK 270
+ G
Sbjct: 253 ALSFEHIAERWLGYH 267
>gi|281491802|ref|YP_003353782.1| glutamate racemase [Lactococcus lactis subsp. lactis KF147]
gi|281375516|gb|ADA65026.1| Glutamate racemase [Lactococcus lactis subsp. lactis KF147]
Length = 271
Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats.
Identities = 50/258 (19%), Positives = 101/258 (39%), Gaps = 7/258 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I + DSG+GGL V +++ +P +Y+ D PYG + + + L
Sbjct: 3 NRPIGLLDSGVGGLTVARELLRQLPNEEIVYIGDTRRAPYGPRSREQIIAFTWDMVN-FL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA + + ++ +P A T++ I +++T A++
Sbjct: 62 LSKDVKMIVMACNTATAMALEIVKEKLDIPVIGVILPGASSAIQKTKTNKIGVIATQASI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R I S ++ ++ S VE ++ + +K + + GK
Sbjct: 122 RSDEYHKTIARKSSAVEVYSLACQKFVSIVESNE----MESEIARKVVSESLVPLIGK-V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALF 251
D ++L CTHYPL+ + ++ V +D+ R LL + + +H +
Sbjct: 177 DTLILGCTHYPLLRSLIQETMGKEVRLIDSGAEAVRDISVLLNYFSINGQERQPLEHRFY 236
Query: 252 LSGKPDIAMRRLMQGFGL 269
+ + + +
Sbjct: 237 TTAGVNSFREIAEKWLNI 254
>gi|47564795|ref|ZP_00235839.1| glutamate racemase [Bacillus cereus G9241]
gi|47558168|gb|EAL16492.1| glutamate racemase [Bacillus cereus G9241]
Length = 276
Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats.
Identities = 50/255 (19%), Positives = 98/255 (38%), Gaps = 5/255 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + + L ++
Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVAEVQSFVFEMVE-FLKQF 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA + L+ P + A T+ G I ++ T T++
Sbjct: 69 PLKALVVACNTAAAVALTALQEALSIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIKSN 128
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+H + +H + LA+ VE + ++++ + + D +
Sbjct: 129 MYEKALHELDTYLKVHSHACPTLATVVENQLE----DTAYVTQQVKQALLPLTKEDIDTL 184
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYPL+ ++ V + +++ A +L + H F +G
Sbjct: 185 ILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFTTGS 244
Query: 256 PDIAMRRLMQGFGLK 270
+ G
Sbjct: 245 ALSFEHIAERWLGYH 259
>gi|262375099|ref|ZP_06068333.1| glutamate racemase [Acinetobacter lwoffii SH145]
gi|262310112|gb|EEY91241.1| glutamate racemase [Acinetobacter lwoffii SH145]
Length = 290
Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats.
Identities = 66/265 (24%), Positives = 117/265 (44%), Gaps = 11/265 (4%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
I IFDSG+GGL V ++ +P F+Y AD PYG +D ++
Sbjct: 16 NATADAPIGIFDSGVGGLSVALEIARHLPNERFVYYADTAHVPYGPRDDQEIRALTAQAI 75
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILS 127
L + ++V+ACNTA D LR + + +G VPA+K A TQS +++L+
Sbjct: 76 E-WLYRQGCKVAVVACNTASAFSLDYLRDYYGENFPIIGLVPALKPAVLNTQSKTVAVLA 134
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVS--SMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
TPAT R ++I + + ++ S+ L VE + ++
Sbjct: 135 TPATFRGQLIKDVISRFAEPAQVKVLPVTSLDLVPFVEAGEQ----MSAACLQTLKEILQ 190
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH---QT 242
+ D +VL CTHYP + + + + +D+ ++AR+ +L + ++
Sbjct: 191 PVVDQGADYLVLGCTHYPFLKSSIQYIFGQKLTLIDSGFAVARQTAQILIKNGLLFEHES 250
Query: 243 RVFDDHALFLSGKPDIAMRRLMQGF 267
+ L +SG+ +R ++Q
Sbjct: 251 KESVKIELVVSGQNAEQLRPILQHL 275
>gi|317969725|ref|ZP_07971115.1| glutamate racemase [Synechococcus sp. CB0205]
Length = 278
Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats.
Identities = 67/259 (25%), Positives = 111/259 (42%), Gaps = 7/259 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GGL + +++ +P +YVAD PYG+ ++ + + L
Sbjct: 5 PIGLFDSGVGGLSIWRQVVHALPSESLLYVADQANVPYGHRSADEIQANSLGIAD-YLVA 63
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA + + LR FP + LG PA+K A T+SG++ +++TPAT +
Sbjct: 64 QGCKAIVLACNTASAVALEPLRQRFPQLPILGLEPAVKPAVQLTRSGVVGVMATPATFQG 123
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ Y + + + LA VE+ + + G D
Sbjct: 124 QLYRATVGRYATAVQVVEQVCVGLAELVEQGDLEGPDCDARLM----GYLQPMLDAGADT 179
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--ALFL 252
IVL CTHYP ++ R+L + LD + ++AR +L +
Sbjct: 180 IVLGCTHYPFVIESIRRLVGPAMAVLDPAPAVARHLADVLRQAELLAMDSAGVLAPRFAT 239
Query: 253 SGKPDIAMRRLMQGFGLKS 271
+ P R L + G+ S
Sbjct: 240 TADPLAFNRALSRLVGVSS 258
>gi|296111814|ref|YP_003622196.1| glutamate racemase [Leuconostoc kimchii IMSNU 11154]
gi|295833346|gb|ADG41227.1| glutamate racemase [Leuconostoc kimchii IMSNU 11154]
Length = 280
Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats.
Identities = 54/260 (20%), Positives = 99/260 (38%), Gaps = 6/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
N I + DSG+GGL V++ + +P FI++ D PYG + + + +
Sbjct: 1 MNKNNPIGMVDSGVGGLTVIKAAQKQLPNEQFIFIGDTARMPYGPRTTDEVIAYTLQMAN 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
++++ L VIACNTA L+ P K A T++ I +++T
Sbjct: 61 FLVNEKHIKLLVIACNTATARALSVLQDQLSIPVIGVIQPGAKAAQLATKNKKIGVIATQ 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ +H Y SQ + + VE DE +K + +
Sbjct: 121 GTVTSEAYDVQLHHYNSQITVVSQAEPEFVQTVELNKY----HSDEARKLVNSHLATLKA 176
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFDD 247
+ D ++L CTH+PL+ + V +D+ + + L + + +D
Sbjct: 177 AKIDTLILGCTHFPLLTPFIKSAIGENVTLIDSGQETVQVIQDCLAQSHLSTVSKHDHND 236
Query: 248 HALFLSGKPDIAMRRLMQGF 267
+ +G P +
Sbjct: 237 DVYYTTGDPVLFKAIATDWL 256
>gi|293393497|ref|ZP_06637807.1| glutamate racemase [Serratia odorifera DSM 4582]
gi|291423832|gb|EFE97051.1| glutamate racemase [Serratia odorifera DSM 4582]
Length = 260
Score = 229 bits (584), Expect = 4e-58, Method: Composition-based stats.
Identities = 86/257 (33%), Positives = 141/257 (54%), Gaps = 6/257 (2%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V Q++R L+P+ H+IY D+V FPYG + + +R++ + + +Y
Sbjct: 2 LVFDSGVGGLSVYQEVRQLLPDLHYIYAFDNVAFPYGEKSEQFIVERVLEIVGAVQQRYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
+ +IACNTA T+ LR+ F S +G VPAIK AA T +G++ +L+T T++R+Y
Sbjct: 62 LAIVIIACNTASTVSLPALRARF-SFPVVGVVPAIKPAAKLTANGIVGLLATRGTVQRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + + C I L+ S L E G ++ +KK ++ +E D +V
Sbjct: 121 THELIARFATDCKIELLGSSELVELAEAKLHGEEVPLAALKKILQPWLSMREPP--DTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF--LSG 254
L CTH+PL+ Q+ P +D+ +IARRA L+ ++ ++ A L+
Sbjct: 179 LGCTHFPLLADELMQVLPQGTRLVDSGAAIARRAAWLISSQENLRSSQEENVAYCMALND 238
Query: 255 KPDIAMRRLMQGFGLKS 271
D + ++Q +G S
Sbjct: 239 DTDALL-PVLQSYGFNS 254
>gi|304413419|ref|ZP_07394892.1| glutamate racemase [Candidatus Regiella insecticola LSR1]
gi|304284262|gb|EFL92655.1| glutamate racemase [Candidatus Regiella insecticola LSR1]
Length = 292
Score = 229 bits (583), Expect = 4e-58, Method: Composition-based stats.
Identities = 78/272 (28%), Positives = 138/272 (50%), Gaps = 4/272 (1%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
++ N +++ + ++LIFDSG+GGL + Q++R L+P H+IY D+ FPYG + +
Sbjct: 17 LQARNAKVDQRFRPTVLIFDSGVGGLSIYQEIRQLLPNIHYIYAFDNQAFPYGEKTEAFI 76
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ + + + ++ L VIACNTA T+ LR F +G VPAIK A T++
Sbjct: 77 VERVLKIVTRVQQQHPLTLVVIACNTASTVSLPTLRKYF-FFPIVGVVPAIKPAVQLTRN 135
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I +L+T AT+ TY +LI + + C I + S L + E+ G + + ++K +
Sbjct: 136 KRIGLLATRATIHCTYIQDLIECFAADCQIERLWSSELVTLAEKKLHGGSVSVEALRKIL 195
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
D +VL CTH+PL+ ++ P+ +D+ +IA R LL
Sbjct: 196 TPWLNM--DSPPDTVVLGCTHFPLLAEELAKILPYNTQMVDSGAAIAHRVVWLLSLQQKA 253
Query: 241 QTRVFDDHALFLSGKPDIAMRR-LMQGFGLKS 271
+ + A + A+ ++Q +G +
Sbjct: 254 VSTTARNIAYCTQKNANTALLLPVLQQYGFST 285
>gi|261380865|ref|ZP_05985438.1| glutamate racemase [Neisseria subflava NJ9703]
gi|319638648|ref|ZP_07993408.1| glutamate racemase [Neisseria mucosa C102]
gi|284796337|gb|EFC51684.1| glutamate racemase [Neisseria subflava NJ9703]
gi|317400032|gb|EFV80693.1| glutamate racemase [Neisseria mucosa C102]
Length = 269
Score = 229 bits (583), Expect = 4e-58, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 104/260 (40%), Gaps = 8/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL ++ + +P + IY D PYG ++ M + L
Sbjct: 6 QRPIGVFDSGVGGLTNVRALMERLPMENIIYFGDTARVPYGTKSRATIETFAMQIVD-FL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ VIACNT + ++R +M L + A + A T++ I I++T T
Sbjct: 65 LENDVKALVIACNTIAAVAGQKIRQKAGNMPVLDVISAGAEAALQTTKNNRIGIIATNTT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IHS + + ++ +L VE + + + +
Sbjct: 125 VNSNAYARAIHSQNNDTLVRTQAAPLLVPLVE----EGWLDHEVTRLTVREYLKPLLADD 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A L + T D+
Sbjct: 181 IDTLVLGCTHFPLLKPLIGREA-QNVTLVDSAITTAEATAKALAQAGLLNTENDNPDYRF 239
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
++S P + G
Sbjct: 240 YVSDIPLRFRTIGERFLGRS 259
>gi|224825572|ref|ZP_03698677.1| glutamate racemase [Lutiella nitroferrum 2002]
gi|224602493|gb|EEG08671.1| glutamate racemase [Lutiella nitroferrum 2002]
Length = 266
Score = 229 bits (583), Expect = 4e-58, Method: Composition-based stats.
Identities = 72/254 (28%), Positives = 113/254 (44%), Gaps = 6/254 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V +++ L+P+ IY+AD PYG + R + L +
Sbjct: 2 IGMFDSGLGGLSVWRELTRLLPQEPVIYLADRAYCPYGGRSHEDILARS-EKITRYLVEQ 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L VIACNTA + ELR P + +G PA+K AA +++SG I++L+T ATL+
Sbjct: 61 GARLIVIACNTATSAAARELRRRHPELPIVGMEPAVKPAALHSRSGQIAVLATRATLKGD 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L Y I + VE + ++ ++ +E D +
Sbjct: 121 KFLELKAQYDDSVDILPLPGDGFVELVE----NGDLASEQAQRVVERQLQPLRAHTVDQV 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALFLSG 254
VL CTHYP + + + P V +D + +++ +A LL R H +G
Sbjct: 177 VLGCTHYPFLSPLIERALPAGVKLIDPARAVSLQAERLLQRHGLSSPPGTVPAHRFVTTG 236
Query: 255 KPDIAMRRLMQGFG 268
+ L Q G
Sbjct: 237 EAPGMRHFLRQVLG 250
>gi|110800511|ref|YP_697257.1| glutamate racemase [Clostridium perfringens ATCC 13124]
gi|168209809|ref|ZP_02635434.1| glutamate racemase [Clostridium perfringens B str. ATCC 3626]
gi|123049548|sp|Q0TM83|MURI_CLOP1 RecName: Full=Glutamate racemase
gi|110675158|gb|ABG84145.1| glutamate racemase [Clostridium perfringens ATCC 13124]
gi|170712130|gb|EDT24312.1| glutamate racemase [Clostridium perfringens B str. ATCC 3626]
Length = 260
Score = 229 bits (583), Expect = 4e-58, Method: Composition-based stats.
Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 6/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I FDSG+GGL VL+K +MP ++IY D PYG ++ F + L
Sbjct: 7 NAPIGFFDSGLGGLSVLRKALEMMPNENYIYYGDSKHAPYGEKTPQEIRSLS-FNAIEFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K VIACNTA + +LR + + +G PA+K A ++G + +++T ATL
Sbjct: 66 IKKGAKAIVIACNTATSAAAHDLREYYKDIPIIGIEPALKPAIKLHETGSVIVMATKATL 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ NL+ Y + + L +E ++ +++K + +
Sbjct: 126 NQEKFKNLMDKYGEHREVIPLPCPGLVEFIE----AGDLEGEDVKNFLREKLNPYMDREI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHALF 251
IVL CTHYP + V + + VD +D S R + L N +++ + +F
Sbjct: 182 SSIVLGCTHYPFVKDVIQDIVGEKVDIIDGSSGTVRELKRRLEENNMESESKKKGNLDIF 241
Query: 252 LSGKPDIAMRRLMQGFGLK 270
S + + + +K
Sbjct: 242 NSLEDKKILELSKKLIEIK 260
>gi|325138826|gb|EGC61377.1| glutamate racemase [Neisseria meningitidis ES14902]
Length = 270
Score = 229 bits (583), Expect = 4e-58, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 105/258 (40%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + L
Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVD-FL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
++ VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 66 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VE ++ + + +
Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVE----EGWLEHEVTRLTVCEYLKPLLADG 181
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D+ + A +L + T D+
Sbjct: 182 IDTLVLGCTHFPLLKPLIGREA-HNVALVDSVITTAEETARVLAQEGLLNTDNNNPDYRF 240
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 241 YVSDIPLKFRTIGERFLG 258
>gi|228984040|ref|ZP_04144229.1| Glutamate racemase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|228775720|gb|EEM24097.1| Glutamate racemase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
Length = 284
Score = 229 bits (583), Expect = 4e-58, Method: Composition-based stats.
Identities = 50/255 (19%), Positives = 97/255 (38%), Gaps = 5/255 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + + L ++
Sbjct: 18 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFVFEMVE-FLKQF 76
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA L+ P + A T+ G I ++ T T++
Sbjct: 77 PLKALVVACNTAAAAALAALQEALSIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIKSN 136
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+H + +H + LA+ VE + ++++ + + D +
Sbjct: 137 MYEKALHELDTYLEVHSHACPTLATVVENQLE----DTAYVTEQVKQALLPLTEEDIDTL 192
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYPL+ ++ V + +++ A +L + H F +G
Sbjct: 193 ILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFTTGS 252
Query: 256 PDIAMRRLMQGFGLK 270
+ G
Sbjct: 253 ALSFEHIAERWLGYH 267
>gi|161506994|ref|YP_001576948.1| glutamate racemase [Lactobacillus helveticus DPC 4571]
gi|260102884|ref|ZP_05753121.1| glutamate racemase [Lactobacillus helveticus DSM 20075]
gi|172048195|sp|A8YTR6|MURI_LACH4 RecName: Full=Glutamate racemase
gi|160347983|gb|ABX26657.1| Glutamate racemase [Lactobacillus helveticus DPC 4571]
gi|260083308|gb|EEW67428.1| glutamate racemase [Lactobacillus helveticus DSM 20075]
Length = 267
Score = 229 bits (583), Expect = 4e-58, Method: Composition-based stats.
Identities = 53/257 (20%), Positives = 100/257 (38%), Gaps = 7/257 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I + DSG+GG V++K+ +P +++ D PYG+ + + L
Sbjct: 3 NRPIGLLDSGVGGFTVVKKVIEKLPHESTVFIGDSANMPYGDKSREQIIELTRRSV-KFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + L + ACNTA + L++ AA T++ +++ +TP T+
Sbjct: 62 LQKKVKLIIFACNTATAVAMPTLQNEVEQQIIGVIQSGSLAAARTTKNKKVAVAATPVTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + V++ LA +E + D ++ + +
Sbjct: 122 NSHAYQKEIKFRDPDIKVMEVAAPELAPLIE-----SQKDYDTNLAAVKRSIAPLKDQDF 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALF 251
D VL CTHYPLI + F + + +D +D +A+ ++ R + H +
Sbjct: 177 DTFVLGCTHYPLIQNEFVEALGDKIQIVDPADQVAQYTFNVMRRDGLFSSFDQAGKHEYY 236
Query: 252 LSGKPDIAMRRLMQGFG 268
+G PD + G
Sbjct: 237 TTGDPDKFSEMGRRFLG 253
>gi|301301177|ref|ZP_07207333.1| glutamate racemase [Lactobacillus salivarius ACS-116-V-Col5a]
gi|300851176|gb|EFK78904.1| glutamate racemase [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 256
Score = 229 bits (583), Expect = 5e-58, Method: Composition-based stats.
Identities = 64/260 (24%), Positives = 114/260 (43%), Gaps = 8/260 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K I +FDSG+GG+ VL+++ +MP +I+ D PYG ++K
Sbjct: 4 KKDAPIGVFDSGMGGISVLRELVKIMPNEDYIFFGDSANAPYGIKTVEEVQKLSFEKVE- 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L Y V+ACNTA + ELR+ +P + +G PA+K A + + + +++TP
Sbjct: 63 HLLSYNCKAIVVACNTATSAAIKELRAAYPDLIIVGLEPALKPAVEHKKDSKVGVMATPL 122
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TL+ ++L++ YV++ I + + L +E + E++ + +
Sbjct: 123 TLKEKKFNDLMNKYVTEADIRKIPAPDLVEFIE----SGDVDSPELETYLRKLLNPYKDS 178
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249
D IVL CTH+P V +++ +D + AR + LL + N +
Sbjct: 179 --DSIVLGCTHFPFAKKVIQKIMGDDTFIVDGGEGAARETKHLLEKSNLLSDKTEKGSVK 236
Query: 250 LFLSGKPDIAMRRLMQGFGL 269
S + + F L
Sbjct: 237 FENSKNTKEELELSQKLFNL 256
>gi|325203563|gb|ADY99016.1| glutamate racemase [Neisseria meningitidis M01-240355]
Length = 270
Score = 229 bits (583), Expect = 5e-58, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 105/258 (40%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL + + +P + IY D PYG ++ M + L
Sbjct: 7 QRPIGVFDSGIGGLTNVCALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVD-FL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
++ VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 66 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VE ++ + + +
Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVE----EGWLEHEVTRLTVCEYLKPLLADG 181
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 182 IDTLVLGCTHFPLLKPLIGREAH-NVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 240
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P + G
Sbjct: 241 YVSDIPLKFRTIGERFLG 258
>gi|209521399|ref|ZP_03270111.1| glutamate racemase [Burkholderia sp. H160]
gi|209498175|gb|EDZ98318.1| glutamate racemase [Burkholderia sp. H160]
Length = 295
Score = 229 bits (583), Expect = 5e-58, Method: Composition-based stats.
Identities = 67/262 (25%), Positives = 109/262 (41%), Gaps = 9/262 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I IFDSG+GGL VL+ +R +P +YVAD + PYG +D + R + + + L
Sbjct: 20 QAPIGIFDSGLGGLSVLRAVRAQLPAEALLYVADSLYAPYGERDDDFITDRTLAI-GEWL 78
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA +R P + +G P +K AA ++S + +L+T ATL
Sbjct: 79 AAQGAKVLVVACNTATAQSIALVREKLP-IPLVGVEPGVKPAALQSKSRVAGVLATQATL 137
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R L+ Y + C L VE G E++ +
Sbjct: 138 RSARFQGLLERYAADCRFLCQPGHGLVQAVERCDVG----SAELRALLRSYLEPMLDAGA 193
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH---A 249
D +VL CTHYP + R + + +D S +IAR+ +L +
Sbjct: 194 DTLVLGCTHYPFLDAAIRDIVGERLTLIDTSVAIARQLERVLQQHGLRAATPATSTPLPR 253
Query: 250 LFLSGKPDIAMRRLMQGFGLKS 271
+ + + +++
Sbjct: 254 FYSTDDGVHQQQLAATLLQIEA 275
>gi|160934063|ref|ZP_02081450.1| hypothetical protein CLOLEP_02926 [Clostridium leptum DSM 753]
gi|156866736|gb|EDO60108.1| hypothetical protein CLOLEP_02926 [Clostridium leptum DSM 753]
Length = 271
Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats.
Identities = 51/260 (19%), Positives = 96/260 (36%), Gaps = 5/260 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ I +FDSG+GGL ++++R L+P +Y D PYGN + + +
Sbjct: 1 MASNHPIGVFDSGVGGLTAVKELRALLPHEDIVYFGDTSRAPYGNRSRDTILRYARQDVN 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L + + + AC T ++ +S P P + A T++ I +++T
Sbjct: 61 -FLLSQKVKMIIAACGTVSSVAASMGQS-LPVPFTGVVTPTCRAAVKATKNKRIGVIATA 118
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ +++ + + + VE + + G
Sbjct: 119 ATIDSGSYRKELNALHPEIQVFEQPCPLFVPLVENAFID--PGDQVTNLVAQRYLSGLRG 176
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDH 248
D ++L CTHYP+I + + V +D+ A A LL + +
Sbjct: 177 AGVDTLILGCTHYPIISAIISKAMGDQVTLIDSGRETAVYAARLLKDQQLLASGGQEGRN 236
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
A ++S D + G
Sbjct: 237 AFYVSDSVDGFNQIADIFLG 256
>gi|311108362|ref|YP_003981215.1| glutamate racemase [Achromobacter xylosoxidans A8]
gi|310763051|gb|ADP18500.1| glutamate racemase [Achromobacter xylosoxidans A8]
Length = 267
Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats.
Identities = 67/256 (26%), Positives = 107/256 (41%), Gaps = 5/256 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ I I+DSG+GGL VL+ +R +P + +YVAD PYG +++R + +
Sbjct: 4 ESPIGIYDSGVGGLSVLRAIRDALPHEYLLYVADSAHVPYGEKTQDYVEQRASTIADYFV 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + V ACNTA +LR P + +G PAIK AA T SG++ + +T TL
Sbjct: 64 SRQAKAMVV-ACNTATAAAIAQLRQRHPQLIIIGVEPAIKPAAHLTSSGVVGVFATTGTL 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ L+ + I VE+ E ++ + E
Sbjct: 123 ASPKFAALVQRQAPEVRILFRPCPEWVRLVEQGVLSGPEAEAAVRAPVA----ELREAGA 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
DV+VL CTH+P + + + V L+ +AR R L + D L
Sbjct: 179 DVLVLGCTHFPFLRDAIQAAAGPGVPLLETGAPVARWLRHQLQERGLLRADGPGDLRLET 238
Query: 253 SGKPDIAMRRLMQGFG 268
SG + + G
Sbjct: 239 SGSAEALSALAPRLLG 254
>gi|325518393|gb|EGC98114.1| glutamate racemase [Burkholderia sp. TJI49]
Length = 285
Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats.
Identities = 66/259 (25%), Positives = 106/259 (40%), Gaps = 8/259 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ IFDSG+GGL VL+ R +P +YVAD PYG +D + +R + + + +
Sbjct: 15 PVGIFDSGLGGLSVLRAARAHLPHESLVYVADTRYNPYGERDDAFITERTLAI-GEWFVQ 73
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA +R ++ +G P IK A + SG+ +L+T ATLR
Sbjct: 74 QGAKALVVACNTATAQSIAAVRERL-AIPLVGVEPGIKPAVQQSASGVAGVLATQATLRS 132
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
L+ + + C L +E G ++ ++ D
Sbjct: 133 ARFQALLERHGAGCRFICQPGHGLVQAIESGDTG----SPALRALLDSYLRPMLDAGADA 188
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHALFL 252
IVL CTHYP + R + V +D SD+IA + +L + + +
Sbjct: 189 IVLGCTHYPFLTATIRDIVGERVTIVDTSDAIALQLARVLDQHDLRAPGGAPVAPPRFYS 248
Query: 253 SGKPDIAMRRLMQGFGLKS 271
+G GL +
Sbjct: 249 TGDGRQLQALASTLLGLDA 267
>gi|56477960|ref|YP_159549.1| glutamate racemase [Aromatoleum aromaticum EbN1]
gi|56314003|emb|CAI08648.1| Glutamate racemase (EC 5.1.1.3), gene: MURI OR GLR OR NMA2026 OR
NMB0458 [Aromatoleum aromaticum EbN1]
Length = 267
Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats.
Identities = 56/263 (21%), Positives = 104/263 (39%), Gaps = 7/263 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I +FDSGIGGL V++ + +P H +Y D PYG ++ +
Sbjct: 1 MNSSRPIGVFDSGIGGLTVVRALMERLPLEHIVYFGDTARVPYGVKSVATIRHFTEQITD 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILST 128
L + + ++ACNT + + +R S+ L + A + A A ++S I ++ T
Sbjct: 61 -FLLQQDVKMLIVACNTMAAVAAETVRQRAGSIPVLDVIEAGAQAAVAQSRSRGIGVIGT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
P T+ + IH+ S ++ + + VE + + +
Sbjct: 120 PTTVNSNAYARRIHALDSGARVYSQACPLFVPLVE----EGWLDHPVTRLTAQEYLKPVL 175
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-D 247
+ D +VL CTHYPL+ + R + V +D++ + A A L + T +
Sbjct: 176 AEEVDSLVLGCTHYPLLKPLLRDVVGPGVRLVDSALTTAELAAAKLHALGLANTHPGEAT 235
Query: 248 HALFLSGKPDIAMRRLMQGFGLK 270
+ ++ P + G
Sbjct: 236 YRFVVTDVPLRFQTIGERFLGRS 258
>gi|229149186|ref|ZP_04277427.1| Glutamate racemase [Bacillus cereus m1550]
gi|228634385|gb|EEK90973.1| Glutamate racemase [Bacillus cereus m1550]
Length = 276
Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats.
Identities = 49/255 (19%), Positives = 99/255 (38%), Gaps = 5/255 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + + L ++
Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQSFVFEMVE-FLKQF 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA + L+ P + A T+ G I ++ T T++
Sbjct: 69 PLKALVVACNTAAAAALNALQEALSIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIKSN 128
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+H + +H + LA+ VE + ++++ + + D +
Sbjct: 129 MYEKALHELDTYLEVHSYACPTLATVVENQLE----DTAYVTQQVKQALLPLTKEDIDTL 184
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYPL+ ++ + + +++ A +L + H F +G
Sbjct: 185 ILGCTHYPLLESYIKKELGEDITIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTGS 244
Query: 256 PDIAMRRLMQGFGLK 270
+ G +
Sbjct: 245 VLSFEHIAERWLGYQ 259
>gi|240850640|ref|YP_002972040.1| glutamate racemase [Bartonella grahamii as4aup]
gi|240267763|gb|ACS51351.1| glutamate racemase [Bartonella grahamii as4aup]
Length = 272
Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats.
Identities = 125/261 (47%), Positives = 176/261 (67%), Gaps = 3/261 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L FDSGIGGL V ++ R L+PE FIYVADD GFPYGNW+++ LK+R++ +F+++L
Sbjct: 3 ERPVLFFDSGIGGLTVFREARILIPEMQFIYVADDAGFPYGNWKENILKERILKIFTNLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+Y P L VIACNT TL+ +LR F + F+G VPAIK AA T+SG IS+L+TP T+
Sbjct: 63 TRYNPALCVIACNTVSTLMMADLRQNFSHVPFVGTVPAIKSAAEQTKSGFISVLATPGTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT+ LI+S+ QCH+ LV S LA E+Y G I +E++KEI CF+EK G+ T
Sbjct: 123 KRAYTNELINSFAGQCHVQLVGSKKLAGFAEDYLRGKSINSEELRKEILPCFVEKNGQYT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVFDDHA 249
DVIVLACTHYP +++ FR+ + W V+W+D + +IA+ R LL +++ + + D A
Sbjct: 183 DVIVLACTHYPFLINFFREHALWSVEWIDPAKAIAKHIRSLLPLSEKVHDQYIKKYQDFA 242
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
L S L +GFGLK
Sbjct: 243 LLTSKNITSLTENLFKGFGLK 263
>gi|254497879|ref|ZP_05110644.1| glutamate racemase [Legionella drancourtii LLAP12]
gi|254352877|gb|EET11647.1| glutamate racemase [Legionella drancourtii LLAP12]
Length = 270
Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats.
Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 11/263 (4%)
Query: 10 KKLQN-SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
L ++ +FDSG+GGL VL+ ++ +P FIY+ D PYG +K+ M
Sbjct: 1 MNLNQLAVGVFDSGMGGLTVLRALKESLPHESFIYLGDTARLPYGTKSPDTVKQYAMQ-M 59
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
+ +L + VIACNTA T L+S P M LG V P A A T++ +++L+
Sbjct: 60 AKLLVERHIKALVIACNTATTAALPYLQSMLPDMPILGVVIPGASAAVAATKNQRVAVLA 119
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+ LI + Q I + +L + EE +I + +K ++G
Sbjct: 120 TETTIASKAYQELIARQLPQAVISTRACSVLVALAEEGMINNQIAREALKHYLDGF---- 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245
D +L CTH+P+ + L P + +D++ + A LL + N +
Sbjct: 176 --NDEDTFLLGCTHFPVFKSLLVDLLPEGIAVVDSAHATANSLYSLLQKQNLLNDKMLGN 233
Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268
++ G
Sbjct: 234 GSVNYLVTDSIKRFQAVGEIFLG 256
>gi|225027973|ref|ZP_03717165.1| hypothetical protein EUBHAL_02233 [Eubacterium hallii DSM 3353]
gi|224954687|gb|EEG35896.1| hypothetical protein EUBHAL_02233 [Eubacterium hallii DSM 3353]
Length = 274
Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats.
Identities = 64/259 (24%), Positives = 106/259 (40%), Gaps = 6/259 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+L + I +FDSG+GG+ VL++M LMP FIY D PYG ++ + +
Sbjct: 18 QLSDPIAVFDSGMGGISVLREMTKLMPNEDFIYYGDSKHAPYGTKTLEEVRTLTIEHITY 77
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ + +ACNTA + LR +P + +G PAIK A T + +++TP
Sbjct: 78 LIKEKHAKAVAVACNTATSAAVRILRDMYPDLPLVGVEPAIKPAVLATGHAKVVVMATPM 137
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TLR L Y Q I+ + L VE+ ++++ + + K
Sbjct: 138 TLREEKFHKLESLYDEQADIYPLPCPGLMEFVEQGILSG----EKLETFLHNLLDPYKDK 193
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFDDH 248
IVL CTHYP + ++++ V D A+ L + Q
Sbjct: 194 DITGIVLGCTHYPFLKETIQKIAGPSVTIFDGGYGTAKELLRRLRVADLAQVDNTRKGSV 253
Query: 249 ALFLSGKPDIAMRRLMQGF 267
S ++R +
Sbjct: 254 TFLNSSDDPALIQRSKKLL 272
>gi|125624017|ref|YP_001032500.1| glutamate racemase [Lactococcus lactis subsp. cremoris MG1363]
gi|166231039|sp|A2RKH0|MURI_LACLM RecName: Full=Glutamate racemase
gi|124492825|emb|CAL97780.1| MurI protein [Lactococcus lactis subsp. cremoris MG1363]
gi|300070787|gb|ADJ60187.1| glutamate racemase [Lactococcus lactis subsp. cremoris NZ9000]
Length = 271
Score = 228 bits (582), Expect = 6e-58, Method: Composition-based stats.
Identities = 52/258 (20%), Positives = 100/258 (38%), Gaps = 7/258 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I + DSG+GGL V +++ +P +Y+ D PYG + + + +L
Sbjct: 3 NRPIGLLDSGVGGLTVARELLRQLPNEEIVYIGDTRRAPYGPRSREQIIAFTWDMVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + V+ACNTA + + ++ +P A T++ I +++T A++
Sbjct: 63 SK-NVKMIVMACNTATAMALEIVKEELDIPVIGVILPGASSAIQKTKTNKIGVIATQASI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R I S + ++ S VE ++ + K+ + GK
Sbjct: 122 RSDEYHKTIARKSSAIEVLSLACPKFVSIVESNE----MESEIAKRVVSESLAPLVGK-I 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251
D ++L CTHYPL+ + ++ V +D+ R LL + R H +
Sbjct: 177 DTLILGCTHYPLLRPLIQETMGKEVRLIDSGAEAVRDISVLLNYFEINAHERKEFQHCFY 236
Query: 252 LSGKPDIAMRRLMQGFGL 269
+ + + +
Sbjct: 237 TTAGVNSFREIAEKWLNI 254
>gi|314930288|gb|EFS94119.1| glutamate racemase [Propionibacterium acnes HL067PA1]
Length = 284
Score = 228 bits (582), Expect = 6e-58, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 103/260 (39%), Gaps = 8/260 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + I IFDSG GGL V + + LMP +Y+ D PYG +++ +
Sbjct: 9 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRRYALQCLDR- 67
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + +IACNTA + + + R + +PA +A+A T++G I ++ T AT
Sbjct: 68 LVAHGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAACRASAATRNGRIGVICTEAT 127
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
R + + + + + VEE E++ +
Sbjct: 128 ARSLSYEDALAAV-PGITLTTQACPKFVPFVEEGITSG----PELEAIAREYLAPIQEAG 182
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ + + V + +S AR + L+ + + F
Sbjct: 183 CDTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMVESGLLHSHPRESSRYF 242
Query: 252 -LSGKPDIAMRRLMQGF-GL 269
+G + + + G
Sbjct: 243 LTTGNAERFEKLGRRLMEGF 262
>gi|229177385|ref|ZP_04304768.1| Glutamate racemase [Bacillus cereus 172560W]
gi|228606108|gb|EEK63546.1| Glutamate racemase [Bacillus cereus 172560W]
Length = 284
Score = 228 bits (582), Expect = 6e-58, Method: Composition-based stats.
Identities = 49/255 (19%), Positives = 99/255 (38%), Gaps = 5/255 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + + L ++
Sbjct: 18 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQSFVFEMVE-FLKQF 76
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA + L+ P + A T+ G I ++ T T++
Sbjct: 77 PLKALVVACNTAAAAALNALQEALSIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIKSN 136
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+H + +H + LA+ VE + ++++ + + D +
Sbjct: 137 MYEKALHELDTYLEVHSYACPTLATVVENQLE----DTAYVTQQVKQALLPLMKEDIDTL 192
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYPL+ ++ + + +++ A +L + H F +G
Sbjct: 193 ILGCTHYPLLESYIKKELGEDITIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTGS 252
Query: 256 PDIAMRRLMQGFGLK 270
+ G +
Sbjct: 253 VLSFEHIAERWLGYQ 267
>gi|225076304|ref|ZP_03719503.1| hypothetical protein NEIFLAOT_01345 [Neisseria flavescens
NRL30031/H210]
gi|224952428|gb|EEG33637.1| hypothetical protein NEIFLAOT_01345 [Neisseria flavescens
NRL30031/H210]
Length = 269
Score = 228 bits (582), Expect = 6e-58, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 103/260 (39%), Gaps = 8/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL ++ + +P + IY D PYG ++ M + L
Sbjct: 6 QRPIGVFDSGVGGLTNVRALMERLPMENIIYFGDTARVPYGTKSRATIETFAMQIVD-FL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ VIACNT + +R +M L + A + A T++ I I++T T
Sbjct: 65 LENDVKALVIACNTIAAVAGQRIRQKAGNMPVLDVISAGAEAALQTTKNNRIGIIATNTT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IHS + + ++ +L VE + + + +
Sbjct: 125 VNSNAYARAIHSKNNDTLVRTQAAPLLVPLVE----EGWLDHEVTRLTVREYLKPLLADD 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A L + T D+
Sbjct: 181 IDTLVLGCTHFPLLKPLIGREA-QNVTLVDSAITTAEATAKALAQAGLLNTENDNPDYRF 239
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
++S P + G
Sbjct: 240 YVSDIPLRFRTIGERFLGRS 259
>gi|168217333|ref|ZP_02642958.1| glutamate racemase [Clostridium perfringens NCTC 8239]
gi|182380603|gb|EDT78082.1| glutamate racemase [Clostridium perfringens NCTC 8239]
Length = 260
Score = 228 bits (582), Expect = 6e-58, Method: Composition-based stats.
Identities = 65/259 (25%), Positives = 111/259 (42%), Gaps = 6/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I FDSG+GGL VL+K +MP ++IY D PYG ++ F + L
Sbjct: 7 NAPIGFFDSGLGGLSVLRKALEMMPNENYIYYGDSKHAPYGEKTPQEIRSLS-FNAIEFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K VIACNTA + +LR + + +G PA+K A ++G + +++T ATL
Sbjct: 66 IKKGAKAIVIACNTATSAAAHDLREYYKDIPIIGIEPALKPAIKLHETGSVIVMATKATL 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ L+ Y + + L +E ++ +++K + +
Sbjct: 126 TQEKFKKLMDKYGEHREVIPLPCPGLVEFIE----AGDLEGEDVKNFLREKLNPYMDREI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHALF 251
IVL CTHYP + V + + VD +D S R + L N +++ + +F
Sbjct: 182 SSIVLGCTHYPFVKDVIQDIVGEKVDIIDGSSGTVRELKRRLEENNMESESKKKGNLDIF 241
Query: 252 LSGKPDIAMRRLMQGFGLK 270
S + + + +K
Sbjct: 242 NSLEDKKILELSKKLIEIK 260
>gi|16767395|ref|NP_463010.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|207859320|ref|YP_002245971.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|17865743|sp|P40723|MURI_SALTY RecName: Full=Glutamate racemase
gi|226707589|sp|B5QXR2|MURI_SALEP RecName: Full=Glutamate racemase
gi|16422698|gb|AAL22969.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|206711123|emb|CAR35497.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|267996437|gb|ACY91322.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|301160637|emb|CBW20168.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|320088535|emb|CBY98294.1| Glutamate racemase [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|323132476|gb|ADX19906.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 4/74]
gi|326625851|gb|EGE32196.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Dublin str. 3246]
gi|332990959|gb|AEF09942.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
Length = 283
Score = 228 bits (582), Expect = 6e-58, Method: Composition-based stats.
Identities = 86/276 (31%), Positives = 148/276 (53%), Gaps = 8/276 (2%)
Query: 1 MKIDNYPCE----KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWE 56
++ +N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG
Sbjct: 5 LQDENTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKS 64
Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
+ + +R++ + + + +Y L+VIACNTA T+ LR F + +G VPAIK AA
Sbjct: 65 ETFIVERVVEIVTAVQQRYPLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAAR 123
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
T +G++ +L+T AT++R YT LI + ++C I ++ S L E G + +E+
Sbjct: 124 LTANGVVGLLATRATVKRPYTHELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEEL 183
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
++ + E D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 184 RRILRPWLRMPEPP--DTVVLGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLLEH 241
Query: 237 INTHQTRVFDDHALFLSGKP-DIAMRRLMQGFGLKS 271
+ A ++ P + ++Q +G ++
Sbjct: 242 EAPDAKSTDANIAYCMAMTPGAEQLLPVLQRYGFET 277
>gi|206968268|ref|ZP_03229224.1| glutamate racemase [Bacillus cereus AH1134]
gi|206737188|gb|EDZ54335.1| glutamate racemase [Bacillus cereus AH1134]
Length = 276
Score = 228 bits (582), Expect = 6e-58, Method: Composition-based stats.
Identities = 49/255 (19%), Positives = 99/255 (38%), Gaps = 5/255 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + + L ++
Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQSFVFEMVE-FLKQF 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA + L+ P + A T+ G I ++ T T++
Sbjct: 69 PLKALVVACNTAAAAALNALQEALSIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIKSN 128
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+H + +H + LA+ VE + ++++ + + D +
Sbjct: 129 MYEKALHELDTYLEVHSYACPTLATVVENQLE----DTAYVTQQVKQALLPLTKEDIDTL 184
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYPL+ ++ + + +++ A +L + H F +G
Sbjct: 185 ILGCTHYPLLESYIKKELGEDITIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTGS 244
Query: 256 PDIAMRRLMQGFGLK 270
+ G +
Sbjct: 245 VLSFEHIAERWLGYQ 259
>gi|330717928|ref|ZP_08312528.1| glutamate racemase [Leuconostoc fallax KCTC 3537]
Length = 277
Score = 228 bits (582), Expect = 6e-58, Method: Composition-based stats.
Identities = 52/257 (20%), Positives = 89/257 (34%), Gaps = 6/257 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I + DSGIGGL V+++ +P IY+ D PYG + + ++
Sbjct: 4 NKPIGMVDSGIGGLTVVKESLEKLPNEQIIYIGDTARMPYGPRTPEEVIAFTKQMADFLI 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
L VIACNTA L+ P +A T + I I++T T+
Sbjct: 64 ATKDIKLLVIACNTATASALIPLQEMLPIPVIGVINSGASRAVQATHNQKIGIIATEGTI 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
++ I + Q + + VE + + + +++ +
Sbjct: 124 ASQIYTHKIRALNQQIEVFSQAEPDFVKLVE----DNQYRLPVAQHQVKAHLQSLKQANI 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPW-PVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHAL 250
D ++L CTH+PL+ + V +D L + Q R H
Sbjct: 180 DTLILGCTHFPLLRPFIVEAFGELDVTLIDAGAVTVDTVDDYLKAHDLSAQKRTRPHHTY 239
Query: 251 FLSGKPDIAMRRLMQGF 267
+ +G R Q
Sbjct: 240 YTTGDVQQFDRIASQWL 256
>gi|170729028|ref|YP_001763054.1| glutamate racemase [Shewanella woodyi ATCC 51908]
gi|229486277|sp|B1KN02|MURI_SHEWM RecName: Full=Glutamate racemase
gi|169814375|gb|ACA88959.1| glutamate racemase [Shewanella woodyi ATCC 51908]
Length = 266
Score = 228 bits (582), Expect = 6e-58, Method: Composition-based stats.
Identities = 81/264 (30%), Positives = 134/264 (50%), Gaps = 9/264 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSG+GGL +L ++R ++P+ ++ Y+ D+ PYG E+ L L +
Sbjct: 1 MSGPILVFDSGVGGLSILDEIRRVLPDQNYCYLFDNARLPYGELEEQELIDGCEALITAT 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + L VIACNTA TL+ LR ++ +G VPAIK AA Y+Q+ I +L+TP T
Sbjct: 61 VAQLGASLVVIACNTASTLVLPVLREAL-TIPVVGVVPAIKPAALYSQAKHIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R+YT +LI + + C + L S L E A G + ++ EI +
Sbjct: 120 IKRSYTHSLIQEFAANCQVELYGSSELVLLAERKASG----KQILQGEIAQLLSPIKVSG 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--- 248
D +VL CTH+P++ +Q V LD+ ++A R L+ +T R H
Sbjct: 176 IDTLVLGCTHFPILKDEIQQYLGDGVLLLDSGKAVAARVSTLIKEESTLNKRQRKGHSKE 235
Query: 249 -ALFLSGKPDIAMRRLMQGFGLKS 271
+ + +++L+ FG +
Sbjct: 236 MIALYTSEVGEGLKKLLAEFGFST 259
>gi|108804439|ref|YP_644376.1| glutamate racemase [Rubrobacter xylanophilus DSM 9941]
gi|108765682|gb|ABG04564.1| glutamate racemase [Rubrobacter xylanophilus DSM 9941]
Length = 281
Score = 228 bits (582), Expect = 6e-58, Method: Composition-based stats.
Identities = 55/258 (21%), Positives = 96/258 (37%), Gaps = 9/258 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GGL VL ++R +P H IY D PYG + ++ + L
Sbjct: 5 RPIGVFDSGVGGLTVLAEIRDRLPYEHTIYFGDTARVPYGVRDLAEVRWFAYEII-RYLV 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
L VIACNTA + +F P + A T++ + +L+TPAT+
Sbjct: 64 SLNVKLVVIACNTATAAALMTAQRSFDVPIIGVIEPGARAAVLETRNRRVGVLATPATVE 123
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ I + ++ ++ +E E++ + + D
Sbjct: 124 SGAYAKAISYLDAGIEVYEQAAPEFVPLIERGITSG----PELEAAARRYLAPLQERGAD 179
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ----TRVFDDHA 249
V++L CTHYPLI ++ V + ++ A +L R +
Sbjct: 180 VVILGCTHYPLISETINRILGPRVRLISSAGQTALEVGRVLSRRGYLRRPRHAEDLGSSV 239
Query: 250 LFLSGKPDIAMRRLMQGF 267
+ P+ +
Sbjct: 240 YVCTADPEEFAALGSRFL 257
>gi|313201826|ref|YP_004040484.1| glutamate racemase [Methylovorus sp. MP688]
gi|312441142|gb|ADQ85248.1| glutamate racemase [Methylovorus sp. MP688]
Length = 297
Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats.
Identities = 71/259 (27%), Positives = 120/259 (46%), Gaps = 9/259 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ + +FDSG+GGL VL +R +P+ IY AD + PYG+ + R + L SD L
Sbjct: 35 DSPVGVFDSGVGGLSVLAHIRQALPQESLIYAADSMHAPYGSKSQAFIIDRAIQL-SDFL 93
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
V+ACNTA ELRS + ++ +G PA+K AAA T+SG+I +L+T TL
Sbjct: 94 ISRGAKALVVACNTATAAAISELRSRY-AIPIIGMEPAVKPAAAATRSGVIGVLATSGTL 152
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ SY Q + + + L +E ++ + ++ +E
Sbjct: 153 QSAQFAALLESYGRQVRVETQACVGLVECIERGE----LQTADTRQLLEKYIQPLLEAGA 208
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV---FDDHA 249
D +VL CTHYP + + +L+ V +D ++AR+ + L + +
Sbjct: 209 DTLVLGCTHYPFVRPLIEELAGPEVAIIDTGAAVARQLKHRLQEADLLKDDSYKMPGVTE 268
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+ + A +G
Sbjct: 269 FWSNADGLSAQSVTSLLWG 287
>gi|56415968|ref|YP_153043.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|62182590|ref|YP_219007.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|161486778|ref|NP_807142.2| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|161501913|ref|NP_457929.2| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. CT18]
gi|197364895|ref|YP_002144532.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|22001825|sp|Q8Z315|MURI_SALTI RecName: Full=Glutamate racemase
gi|75479264|sp|Q57H86|MURI_SALCH RecName: Full=Glutamate racemase
gi|81599685|sp|Q5PK79|MURI_SALPA RecName: Full=Glutamate racemase
gi|229486290|sp|B5BJP1|MURI_SALPK RecName: Full=Glutamate racemase
gi|56130225|gb|AAV79731.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|62130223|gb|AAX67926.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|197096372|emb|CAR61977.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|322717091|gb|EFZ08662.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. A50]
Length = 283
Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats.
Identities = 86/276 (31%), Positives = 148/276 (53%), Gaps = 8/276 (2%)
Query: 1 MKIDNYPCE----KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWE 56
++ +N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG
Sbjct: 5 LQDENTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKS 64
Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
+ + +R++ + + + +Y L+VIACNTA T+ LR F + +G VPAIK AA
Sbjct: 65 ETFIVERVVEIVTAVQQRYPLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAAR 123
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
T +G++ +L+T AT++R YT LI + ++C I ++ S L E G + +E+
Sbjct: 124 LTANGVVGLLATRATVKRPYTHELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEEL 183
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
++ + E D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 184 RRILRPWLRMPEPP--DTVVLGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLLEH 241
Query: 237 INTHQTRVFDDHALFLSGKP-DIAMRRLMQGFGLKS 271
+ A ++ P + ++Q +G ++
Sbjct: 242 EAPDAKSTDANIAYCMAMTPGAEQLLPVLQRYGFET 277
>gi|221214852|ref|ZP_03587821.1| glutamate racemase [Burkholderia multivorans CGD1]
gi|221165391|gb|EED97868.1| glutamate racemase [Burkholderia multivorans CGD1]
Length = 292
Score = 228 bits (581), Expect = 7e-58, Method: Composition-based stats.
Identities = 71/259 (27%), Positives = 110/259 (42%), Gaps = 8/259 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL VL+ +R +P F+YVAD PYG +D + +R + + + L +
Sbjct: 22 PIGIFDSGLGGLSVLRAVRARLPGESFVYVADTRHAPYGERDDAFITERTLAI-GEWLVE 80
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ V+ACNTA +R ++ +G P IK A + SG++ +L+T ATLR
Sbjct: 81 QRAKALVVACNTATAQSIAAVRERL-AIPLVGVEPGIKPAVEQSASGVVGVLATQATLRS 139
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
L+ + + C L VE G ++ ++G D
Sbjct: 140 ARFQALLERHGAGCRFICQPGHGLVQAVERGDTG----SPALRTLLDGYLKPMLDAGADT 195
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--ALFL 252
IVL CTHYP + R L + +D SD+IAR+ +L +
Sbjct: 196 IVLGCTHYPFLTPAIRSLIGERMTIVDTSDAIARQLARVLEQHGLRTPAGVPAAAPRFCS 255
Query: 253 SGKPDIAMRRLMQGFGLKS 271
+G L +
Sbjct: 256 TGDGRPLQALASTLLDLDA 274
>gi|189350987|ref|YP_001946615.1| glutamate racemase [Burkholderia multivorans ATCC 17616]
gi|189335009|dbj|BAG44079.1| glutamate racemase [Burkholderia multivorans ATCC 17616]
Length = 290
Score = 228 bits (581), Expect = 7e-58, Method: Composition-based stats.
Identities = 71/259 (27%), Positives = 110/259 (42%), Gaps = 8/259 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL VL+ +R +P F+YVAD PYG +D + +R + + + L +
Sbjct: 20 PIGIFDSGLGGLSVLRAVRARLPGESFVYVADTRHAPYGERDDAFITERTLAI-GEWLVE 78
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ V+ACNTA +R ++ +G P IK A + SG++ +L+T ATLR
Sbjct: 79 QRAKALVVACNTATAQSIAAVRERL-AIPLVGVEPGIKPAVEQSASGVVGVLATQATLRS 137
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
L+ + + C L VE G ++ ++G D
Sbjct: 138 ARFQALLERHGAGCRFICQPGHGLVQAVERGDTG----SPALRTLLDGYLKPMLDAGADT 193
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--ALFL 252
IVL CTHYP + R L + +D SD+IAR+ +L +
Sbjct: 194 IVLGCTHYPFLTPAIRSLIGERMTIVDTSDAIARQLARVLEQHGLRTPAGVPAAAPRFCS 253
Query: 253 SGKPDIAMRRLMQGFGLKS 271
+G L +
Sbjct: 254 TGDGRPLQALASTLLDLDA 272
>gi|161524256|ref|YP_001579268.1| glutamate racemase [Burkholderia multivorans ATCC 17616]
gi|160341685|gb|ABX14771.1| glutamate racemase [Burkholderia multivorans ATCC 17616]
Length = 292
Score = 228 bits (581), Expect = 7e-58, Method: Composition-based stats.
Identities = 71/259 (27%), Positives = 110/259 (42%), Gaps = 8/259 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL VL+ +R +P F+YVAD PYG +D + +R + + + L +
Sbjct: 22 PIGIFDSGLGGLSVLRAVRARLPGESFVYVADTRHAPYGERDDAFITERTLAI-GEWLVE 80
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ V+ACNTA +R ++ +G P IK A + SG++ +L+T ATLR
Sbjct: 81 QRAKALVVACNTATAQSIAAVRERL-AIPLVGVEPGIKPAVEQSASGVVGVLATQATLRS 139
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
L+ + + C L VE G ++ ++G D
Sbjct: 140 ARFQALLERHGAGCRFICQPGHGLVQAVERGDTG----SPALRTLLDGYLKPMLDAGADT 195
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--ALFL 252
IVL CTHYP + R L + +D SD+IAR+ +L +
Sbjct: 196 IVLGCTHYPFLTPAIRSLIGERMTIVDTSDAIARQLARVLEQHGLRTPAGVPAAAPRFCS 255
Query: 253 SGKPDIAMRRLMQGFGLKS 271
+G L +
Sbjct: 256 TGDGRPLQALASTLLDLDA 274
>gi|291619386|ref|YP_003522128.1| MurI [Pantoea ananatis LMG 20103]
gi|291154416|gb|ADD79000.1| MurI [Pantoea ananatis LMG 20103]
Length = 283
Score = 228 bits (581), Expect = 7e-58, Method: Composition-based stats.
Identities = 82/261 (31%), Positives = 139/261 (53%), Gaps = 4/261 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
L+ ++L+FDSG+GGL V ++R L+P+ H++Y D+ GFPYG + + +R++ +
Sbjct: 18 SDLRPTVLVFDSGVGGLSVYDEVRQLLPDLHYLYAFDNAGFPYGEKTETFIVERVVAIVD 77
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
I ++ L +IACNTA T+ LR F + +G VPAIK AA T++G++ +L+T
Sbjct: 78 AITRRHPISLVIIACNTASTVTLPALRERF-AFPVVGVVPAIKPAARLTRNGVVGLLATR 136
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+RR+YT L+ + C I ++ S L E G ++ DEI++ ++
Sbjct: 137 ATVRRSYTHELVSQFAKTCKIEMLGSAELVELAEAKLHGEEVSIDEIRRIVQPWLRM--A 194
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+ D +VL CTH+PL+ +Q+ P +D+ +IARR LL + A
Sbjct: 195 EPPDTVVLGCTHFPLLRDELQQILPEGTRLIDSGAAIARRTAWLLENEAPEVRSSLQNVA 254
Query: 250 LFLSGKPDI-AMRRLMQGFGL 269
+ + ++Q +G
Sbjct: 255 FCTELDGEAVQLSPVLQRYGF 275
>gi|308188582|ref|YP_003932713.1| glutamate racemase [Pantoea vagans C9-1]
gi|308059092|gb|ADO11264.1| Glutamate racemase [Pantoea vagans C9-1]
Length = 283
Score = 228 bits (581), Expect = 7e-58, Method: Composition-based stats.
Identities = 82/261 (31%), Positives = 139/261 (53%), Gaps = 4/261 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
L+ ++L+FDSG+GGL V ++R L+P+ H++Y D+ GFPYG + + +R++ +
Sbjct: 18 SDLRPTVLVFDSGVGGLSVYDEVRQLLPDLHYLYAFDNAGFPYGEKSETFIVERVVAIVE 77
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
I +Y L +IACNTA T+ LR F + +G VPAIK AA T++G++ +L+T
Sbjct: 78 AITQRYPLSLVIIACNTASTVSLPALRERF-AFPVVGVVPAIKPAARLTRNGVVGLLATR 136
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+RR YT L+ + C+I ++ S L E G ++ DE+++ ++
Sbjct: 137 ATVRRPYTHELVSQFAGSCNIEMLGSAELVELAEAKLHGAEVALDEVRRIVQPWLRM--A 194
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+ D +VL CTH+PL+ +Q+ P +D+ +IARR LL + A
Sbjct: 195 EPPDTVVLGCTHFPLLREELQQVLPEGTRLIDSGAAIARRTVWLLEHEAPQIHSSQQNVA 254
Query: 250 LFLSGKPDI-AMRRLMQGFGL 269
+ + ++Q +G
Sbjct: 255 FCTELDGEAVQLSPILQRYGF 275
>gi|319898917|ref|YP_004159010.1| Glutamate racemase [Bartonella clarridgeiae 73]
gi|319402881|emb|CBI76432.1| Glutamate racemase [Bartonella clarridgeiae 73]
Length = 273
Score = 228 bits (581), Expect = 7e-58, Method: Composition-based stats.
Identities = 130/262 (49%), Positives = 179/262 (68%), Gaps = 4/262 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L FDSGIGGL VL+K+R +PEY FIY+ADD FPYG WE+ L++R++ +F+ +L
Sbjct: 3 EKPLLFFDSGIGGLTVLRKVRLFVPEYQFIYIADDAAFPYGVWEEEILRRRILKIFAYLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Y PVL VIACNTA TLI ++LR FP++ F+G VPAIK AA T+SG+IS+L+TP T+
Sbjct: 63 KLYNPVLCVIACNTASTLIIEDLRQEFPNICFVGTVPAIKLAAEQTKSGIISVLATPGTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT LI+S+ QCH+ LV S LA E Y G I E+E++ EI CFIEK GK T
Sbjct: 123 KRAYTHELINSFAGQCHVQLVGSEKLAGFAENYLRGYPINEEELRHEILPCFIEKNGKLT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP----RINTHQTRVFDDH 248
D++VLACTHYP ++++FR+ + WPVDW+D + ++A+R R LLP ++ + D
Sbjct: 183 DIVVLACTHYPFLINLFREQALWPVDWIDPAKAVAKRIRSLLPILPIKMQNKNMKKHKDF 242
Query: 249 ALFLSGKPDIAMRRLMQGFGLK 270
ALF S + L+Q F L
Sbjct: 243 ALFTSQNISSSTEYLLQKFQLN 264
>gi|261868128|ref|YP_003256050.1| glutamate racemase [Aggregatibacter actinomycetemcomitans D11S-1]
gi|261413460|gb|ACX82831.1| glutamate racemase [Aggregatibacter actinomycetemcomitans D11S-1]
Length = 275
Score = 228 bits (581), Expect = 7e-58, Method: Composition-based stats.
Identities = 84/260 (32%), Positives = 132/260 (50%), Gaps = 5/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +IL FDSG+GG V +++ L+P+YH++Y D+ FPY + + +R + + I
Sbjct: 6 KPTILFFDSGVGGFSVYHEVKQLLPDYHYLYCFDNAYFPYSEKPEEKIIERTLKICQRID 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Y L VIACNTA T++ LR F S+ +G VPAIK AAA T + I +L+T T+
Sbjct: 66 QMYPLDLIVIACNTASTVVLPSLREHF-SIPIVGTVPAIKPAAAQTTTKHIGLLATKGTV 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R Y S+LI Y + C + + S L E G I +EIK E+
Sbjct: 125 NRKYLSDLIDKYAADCRVEKIGSTKLVELAERKFHGYPIDLNEIKSEVLTWVTM---SDL 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PLI +Q P + ++D+ ++A+R LL + ++
Sbjct: 182 DCVVLGCTHFPLIKSEIQQCLPQVIYFIDSGAAVAKRVESLLSDVKVRSKNQTNNQVFCT 241
Query: 253 SG-KPDIAMRRLMQGFGLKS 271
P+ + L+Q G ++
Sbjct: 242 KMISPEDGLPNLIQSLGFET 261
>gi|50955005|ref|YP_062293.1| glutamate racemase [Leifsonia xyli subsp. xyli str. CTCB07]
gi|71648716|sp|Q6AEK8|MURI_LEIXX RecName: Full=Glutamate racemase
gi|50951487|gb|AAT89188.1| glutamate racemase [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 272
Score = 228 bits (581), Expect = 7e-58, Method: Composition-based stats.
Identities = 54/258 (20%), Positives = 97/258 (37%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + +R +P +YV D PYG +++ + + +L
Sbjct: 3 DAPIGIFDSGVGGLTVARAIRDQLPNESILYVGDTTHSPYGPKPIADVRRYSLEVLD-LL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L VIACNTA + + + R + PA+++A A T++G + ++ T T+
Sbjct: 62 VEQGVKLLVIACNTASSAVLRDARERYAVPVVEVIQPAVRRAVAATRTGRVGVIGTVGTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + + VE DE+ +
Sbjct: 122 ASRAYEDAFAA-APDLRLFPRACPRFVEFVETGVTSG----DEVLRVAAEYLQPLRDADV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251
D +VL CTHYP + + V + + A+ +L +
Sbjct: 177 DTLVLGCTHYPFLEGAISYVMGEGVSLVSSDIETAKDVYRILVSGGFERHDSAPPTVRYE 236
Query: 252 LSG-KPDIAMRRLMQGFG 268
+G + +R + G
Sbjct: 237 ATGLDAEHFLRLAHRFIG 254
>gi|305664609|ref|YP_003860896.1| glutamate racemase [Maribacter sp. HTCC2170]
gi|88708626|gb|EAR00862.1| glutamate racemase [Maribacter sp. HTCC2170]
Length = 262
Score = 228 bits (581), Expect = 8e-58, Method: Composition-based stats.
Identities = 65/241 (26%), Positives = 113/241 (46%), Gaps = 7/241 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I IFDSG+GG + +++ +P + +Y AD PYG + + + +++L
Sbjct: 4 DPIGIFDSGVGGTSIWKEINVQLPNENTVYFADSENAPYGEKSSEEIIQLSVKN-TELLL 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
L V+ACNTA T D LR + + F+G PAIK AA ++S + +L+T TL
Sbjct: 63 GKGCKLIVVACNTATTNAIDHLRKNY-DVPFIGIEPAIKPAALQSKSKTVGVLATKGTLT 121
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + ++ + + L +E KI E ++ + K D
Sbjct: 122 SSLFHSTSENHTNGITVIEQVGKGLVPLIE----EGKINSKETRELLFSYIGPMLEKGID 177
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-HALFL 252
+VL CTHYP ++ V L P V +D+ +++AR+AR +L + + H +
Sbjct: 178 YLVLGCTHYPYLIPVLNDLIPDHVKIIDSGEAVARQARAVLEQKKITNSSHNTAYHKFYT 237
Query: 253 S 253
+
Sbjct: 238 N 238
>gi|309791176|ref|ZP_07685708.1| glutamate racemase [Oscillochloris trichoides DG6]
gi|308226738|gb|EFO80434.1| glutamate racemase [Oscillochloris trichoides DG6]
Length = 256
Score = 228 bits (581), Expect = 8e-58, Method: Composition-based stats.
Identities = 67/253 (26%), Positives = 121/253 (47%), Gaps = 8/253 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ +R +P++ +Y+AD PYG ++ R + ++ L +
Sbjct: 2 IGVFDSGLGGLSVLRAIRERLPDHDLLYLADSAYCPYGPRPAAEVRVRA-QVCANWLLQQ 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L VIACNTA + D+LR+ P + +G P +K A A +++G + +L+T TLR
Sbjct: 61 GADLIVIACNTATSAAADQLRAELP-VPVIGLEPGLKPAIAASRNGRVGVLATSGTLRGE 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
NL+ + S+ I + S L VE E++ + G + D +
Sbjct: 120 RFMNLVRRFASRAQIFTMPSPDLVGYVEAGDLNG----PEVRAALTGYLEPLRSQGVDAV 175
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+P + + +L+ ++ +D ++A + ++ +G
Sbjct: 176 VLGCTHFPFLRPLIAELAGPEIEIIDTGPAVAEQVSRIVEVYAI--DPDGGTLRFATTGD 233
Query: 256 PDIAMRRLMQGFG 268
P+ L++ +G
Sbjct: 234 PEAVGPPLVRIWG 246
>gi|20807090|ref|NP_622261.1| glutamate racemase [Thermoanaerobacter tengcongensis MB4]
gi|24418565|sp|Q8RC52|MURI2_THETN RecName: Full=Glutamate racemase 2
gi|20515581|gb|AAM23865.1| Glutamate racemase [Thermoanaerobacter tengcongensis MB4]
Length = 264
Score = 228 bits (581), Expect = 8e-58, Method: Composition-based stats.
Identities = 55/256 (21%), Positives = 101/256 (39%), Gaps = 8/256 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL VL+++ ++PE +IY D PYG+ ++ + + +
Sbjct: 3 SRPIGVFDSGVGGLTVLKRLIQVLPEEDYIYFGDTKRVPYGDRSKEEIELFAGQIINFM- 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNT I + + F + T++ + +++T T+
Sbjct: 62 KEKNVKAVVIACNTTCATID---KGKYDIELFDVLKAGAESGVYCTKNKKVGVIATKRTV 118
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I S Q ++ + +E+ + K + C E +GK
Sbjct: 119 ESRSYEINIKSINPQIEVYQKACPEFVPLIEKGLYNSHL----AYKAAKDCLEEFKGKEI 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYPL+ + + + V +D + ++ + L R F+
Sbjct: 175 DTLILGCTHYPLMEPIIKAIMGDGVKVVDPAVRLSHEVKEYLERSRILNFGKKGKIEFFV 234
Query: 253 SGKPDIAMRRLMQGFG 268
SG + R G
Sbjct: 235 SGDAENFKRAAEMVLG 250
>gi|229114438|ref|ZP_04243856.1| Glutamate racemase [Bacillus cereus Rock1-3]
gi|228669117|gb|EEL24541.1| Glutamate racemase [Bacillus cereus Rock1-3]
Length = 275
Score = 227 bits (580), Expect = 8e-58, Method: Composition-based stats.
Identities = 49/255 (19%), Positives = 96/255 (37%), Gaps = 5/255 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + + L ++
Sbjct: 10 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFVFEMVE-FLKQF 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA L+ P + A T+ G I ++ T T++
Sbjct: 69 PLKALVVACNTAAAAALTALQEALSIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIQSN 128
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+H + +H + LA+ E + ++++ + + D +
Sbjct: 129 MYEKALHELDTYLEVHSHACPTLATVAENQLE----DTAYVTQQVKQALLPLTKEDIDTL 184
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYPL+ ++ V + +++ A +L + H F +G
Sbjct: 185 ILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTGS 244
Query: 256 PDIAMRRLMQGFGLK 270
G +
Sbjct: 245 VLSFEHIAELWLGYE 259
>gi|229042717|ref|ZP_04190457.1| Glutamate racemase [Bacillus cereus AH676]
gi|228726657|gb|EEL77874.1| Glutamate racemase [Bacillus cereus AH676]
Length = 265
Score = 227 bits (580), Expect = 8e-58, Method: Composition-based stats.
Identities = 50/253 (19%), Positives = 98/253 (38%), Gaps = 5/253 (1%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+ DSG+GGL V ++ +P+ Y+ D+ PYG ++ + + L ++
Sbjct: 1 MLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQSFVFEMVE-FLKQFPL 59
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
V+ACNTA EL+ P + A T+ I ++ T T++
Sbjct: 60 KALVVACNTAAAAALTELQEALSIPVIGVIHPGARAAIKVTKKEKIGVIGTVGTIKSNMY 119
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+H + +H + LA+ VE I + ++++ + + D ++L
Sbjct: 120 EKALHELDTYLEVHSHACPTLATVVENRLEDIAY----VTQQVKQALLPLTKEDIDTLIL 175
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257
CTHYPL+ ++ V + +++ A +L + H F +G
Sbjct: 176 GCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTGSVL 235
Query: 258 IAMRRLMQGFGLK 270
+ G +
Sbjct: 236 SFEHIAERWLGYQ 248
>gi|168205832|ref|ZP_02631837.1| glutamate racemase [Clostridium perfringens E str. JGS1987]
gi|169343233|ref|ZP_02864244.1| glutamate racemase [Clostridium perfringens C str. JGS1495]
gi|169298531|gb|EDS80612.1| glutamate racemase [Clostridium perfringens C str. JGS1495]
gi|170662679|gb|EDT15362.1| glutamate racemase [Clostridium perfringens E str. JGS1987]
Length = 260
Score = 227 bits (580), Expect = 9e-58, Method: Composition-based stats.
Identities = 66/259 (25%), Positives = 113/259 (43%), Gaps = 6/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I FDSG+GGL VL+K +MP ++IY D PYG ++ F + L
Sbjct: 7 NAPIGFFDSGLGGLSVLRKALEMMPNENYIYYGDSKHAPYGEKTPQEIRSLS-FNAIEFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K VIACNTA + +LR + + +G PA+K A ++G + +++T ATL
Sbjct: 66 IKKGAKAIVIACNTATSAAAHDLREYYKDIPIIGIEPALKPAIKLHETGSVIVMATKATL 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ NL+ Y + + L +E ++ +++K + +
Sbjct: 126 TQEKFKNLMDKYGEHREVIPLPCPGLVEFIE----AGDLEGEDVKNFLREKLNPYMDREI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHALF 251
IVL CTHYP + V + + VD +D S R + L N +++ + +F
Sbjct: 182 SSIVLGCTHYPFVKDVIQDIVGEKVDIIDGSSGTVRELKRRLEENNMESESKKKGNLDIF 241
Query: 252 LSGKPDIAMRRLMQGFGLK 270
S + + + + +K
Sbjct: 242 NSLEDNKILELSKKLIEIK 260
>gi|325128817|gb|EGC51677.1| glutamate racemase [Neisseria meningitidis N1568]
Length = 255
Score = 227 bits (580), Expect = 9e-58, Method: Composition-based stats.
Identities = 58/255 (22%), Positives = 105/255 (41%), Gaps = 8/255 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + L
Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVD-FL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
++ VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 66 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VE ++ + + +
Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVE----EGWLEHEVTRLTVCEYLKPLLADG 181
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 182 IDTLVLGCTHFPLLKPLIGREAG-NVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 240
Query: 251 FLSGKPDIAMRRLMQ 265
++S P +
Sbjct: 241 YVSDIPLKFRTIGER 255
>gi|308388659|gb|ADO30979.1| glutamate racemase [Neisseria meningitidis alpha710]
Length = 270
Score = 227 bits (580), Expect = 9e-58, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 105/258 (40%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSGIGGL ++ + +P + IY D PYG ++ M + L
Sbjct: 7 QRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVD-FL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
++ VIACNT + ++R +M L + A K A A T++ I I++T T
Sbjct: 66 LEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTT 125
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH + ++ +L VE ++ + + +
Sbjct: 126 VNSNAYARAIHRNNPDTLVRTQAAPLLVPLVE----EGWLEHEVTRLTVCEYLKPLLADG 181
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A +L + T D+
Sbjct: 182 IDTLVLGCTHFPLLKPLIGREAH-NVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRF 240
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S P G
Sbjct: 241 YVSDIPLKFRTIGECFLG 258
>gi|73541920|ref|YP_296440.1| glutamate racemase [Ralstonia eutropha JMP134]
gi|123624580|sp|Q46Z37|MURI_RALEJ RecName: Full=Glutamate racemase
gi|72119333|gb|AAZ61596.1| glutamate racemase [Ralstonia eutropha JMP134]
Length = 272
Score = 227 bits (580), Expect = 9e-58, Method: Composition-based stats.
Identities = 64/258 (24%), Positives = 110/258 (42%), Gaps = 7/258 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GGL VL+++R L+P +Y+AD PYG + ++ R + L
Sbjct: 8 PIGVFDSGLGGLSVLREIRALLPHESLLYLADSKYAPYGEKPEAFVQARTLQACE-WLLA 66
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
VIACNTA + LR T P + +G P +K AAA +QS ++ +L+T TL+
Sbjct: 67 QGCKALVIACNTATGHAVELLRQTLP-VPIIGVEPGLKPAAAASQSKVVGVLATANTLKS 125
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ L+ S + + + L +E+ I +I+ ++ D
Sbjct: 126 GKFARLLASLDGESRFICEAGLGLVPLIEQ----GDIDGPDIRGRLDNYLTPMLEAGADT 181
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHALFLS 253
+VL CTHYP + R + + +D +IAR+ L + +
Sbjct: 182 LVLGCTHYPFLSDTIRDMVGNQLTLVDTGSAIARQLARKLVEHDLAVAPGAVPQDRFVST 241
Query: 254 GKPDIAMRRLMQGFGLKS 271
+ +++
Sbjct: 242 KDAAHLRQMAAALLHIET 259
>gi|309812185|ref|ZP_07705943.1| glutamate racemase [Dermacoccus sp. Ellin185]
gi|308433872|gb|EFP57746.1| glutamate racemase [Dermacoccus sp. Ellin185]
Length = 266
Score = 227 bits (580), Expect = 9e-58, Method: Composition-based stats.
Identities = 58/258 (22%), Positives = 97/258 (37%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG GGL V + + +P IY+ D PYG +++ + L
Sbjct: 3 DAPIGIFDSGYGGLTVARAVLDQLPHEKIIYLGDTARAPYGPRPIAEVRQYAIECLD-SL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACN+A + + R + PA ++AAA T++ + ++ST AT
Sbjct: 62 VEQGVKALVIACNSASAAVLHDARERYDVPVVEVIRPATRRAAAATRNNRVGVISTEATH 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ ++ + Q I V VE E+ +
Sbjct: 122 QSGAYTDSFAA-APQVKISSVPCPRFVEFVEAGITSG----PELLTVAHKYLDGLVDEGV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHAL 250
D ++L CTHYPL+ V + V + +++ A+ +L I + H
Sbjct: 177 DTLILGCTHYPLLTGVISYVVGSTVTLVSSAEETAKDVYRVLADIGQLRDPELGPTQHQW 236
Query: 251 FLSGKPDIAMRRLMQGFG 268
+G P + G
Sbjct: 237 MTTGDPAAFETLARRFLG 254
>gi|300789525|ref|YP_003769816.1| glutamate racemase [Amycolatopsis mediterranei U32]
gi|299799039|gb|ADJ49414.1| glutamate racemase [Amycolatopsis mediterranei U32]
Length = 257
Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats.
Identities = 56/253 (22%), Positives = 98/253 (38%), Gaps = 7/253 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V + + +P YV D PYG + + + L +
Sbjct: 1 MFDSGVGGLTVARAILEQLPAEQLRYVGDTAHNPYGPLPIATARSYALAALDE-LVESGV 59
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
VIACNTA + R + +PA+++A T +G + ++ T T+R
Sbjct: 60 KALVIACNTASAACLRDARERYDVPVIEVVLPAVRRAVVATHTGRVGVIGTEGTVRSRAY 119
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ + + V+ VE + ++ +G + D +VL
Sbjct: 120 EDAFAA-APAITLTSVACPRFVDFVERGITTGR----QVLGLAQGYLQPLLDAQVDTLVL 174
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALFLSGKP 256
CTHYPL+ V + + V + ++D A+ +L + TR H +G
Sbjct: 175 GCTHYPLLQGVLQIVMGQEVTLVSSADETAKDLVRVLTEGDLLTTRDTPPRHEFLATGSA 234
Query: 257 DIAMRRLMQGFGL 269
+ R + G
Sbjct: 235 EPFTRLAQRFMGF 247
>gi|86606820|ref|YP_475583.1| glutamate racemase [Synechococcus sp. JA-3-3Ab]
gi|86555362|gb|ABD00320.1| glutamate racemase [Synechococcus sp. JA-3-3Ab]
Length = 292
Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats.
Identities = 56/267 (20%), Positives = 104/267 (38%), Gaps = 18/267 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GGL V + +R +P+ +Y AD PYG+ + + + +
Sbjct: 14 PIGVFDSGLGGLTVWRALRRRLPQERLVYFADTARLPYGDRSAEEILTFVRQIL-RWMQA 72
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ V+ACNT+ L ++++ F +P + A A Q I +++T AT++
Sbjct: 73 QPVKVVVMACNTSSALALEQVQQEFALPILGLILPGAQAALA--QGSRIGVIATAATVKS 130
Query: 135 TYTSNLIHSYV--------SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
S I Y + +E ++ E+++ E
Sbjct: 131 RAYSKAIQEYSALDPRRFPQPVQCWEQACPEFVPLIE----AGQLDGPELRQAAERYLQP 186
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-- 244
+ D +V CTHYPL+ + + L P V +D ++ L +
Sbjct: 187 LLQQGIDTLVYGCTHYPLLDPLLKSLLPSSVRRVDPGVALVGSLARELSLWGLRRPSTAS 246
Query: 245 -FDDHALFLSGKPDIAMRRLMQGFGLK 270
+ H ++SG P+ + G +
Sbjct: 247 QAEPHRFYVSGDPERFAQLATPWLGFR 273
>gi|18311550|ref|NP_563484.1| glutamate racemase [Clostridium perfringens str. 13]
gi|20177975|sp|Q8XHB7|MURI_CLOPE RecName: Full=Glutamate racemase
gi|18146234|dbj|BAB82274.1| probable glutamate racemase [Clostridium perfringens str. 13]
Length = 260
Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats.
Identities = 67/259 (25%), Positives = 112/259 (43%), Gaps = 6/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I FDSG+GGL VL+K +MP ++IY D PYG ++ F + L
Sbjct: 7 NAPIGFFDSGLGGLSVLRKALEMMPNENYIYYGDSKHAPYGEKTPQEIRSLS-FNAIEFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K VIACNTA + +LR + + +G PA+K A ++G + +++T ATL
Sbjct: 66 IKKGAKAIVIACNTATSAAAHDLREYYKDIPIIGIEPALKPAIKLHETGSVIVMATKATL 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ NL+ Y + + L +E ++ +++K + +
Sbjct: 126 TQEKFKNLMDKYGEHREVIPLPCPGLVEFIE----AGDLEGEDVKNFLREKLNPYMDREI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHALF 251
IVL CTHYP + V + L VD +D S R + L N +++ + +F
Sbjct: 182 SSIVLGCTHYPFVKDVIQDLVGEKVDIIDGSSGTIRELKRRLEENNMESESKKKGNLDIF 241
Query: 252 LSGKPDIAMRRLMQGFGLK 270
S + + + +K
Sbjct: 242 NSLEDKKILELSKKLIEIK 260
>gi|323359605|ref|YP_004226001.1| glutamate racemase [Microbacterium testaceum StLB037]
gi|323275976|dbj|BAJ76121.1| glutamate racemase [Microbacterium testaceum StLB037]
Length = 272
Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats.
Identities = 53/258 (20%), Positives = 93/258 (36%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + +P +Y+ D PYG +++ + + L
Sbjct: 3 DAPIGIFDSGVGGLTVARAVSQQLPRESILYIGDTARSPYGPKPIADVRRYALEVLD-TL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACNTA + + R + PA++ A + T++G I ++ T T+
Sbjct: 62 VEQGVKMLVIACNTASAAMLRDARERYDVPVVEVIGPAVRTAMSTTRNGRIGVIGTVGTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+++ + + VE E+ E
Sbjct: 122 GSRAYQDMLEV-NENLTVFAEACPRFVEFVEAGVT----DSPEVLATAEQYLAPLRHAGV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251
D +VL CTHYP + + V + + A+ L + H
Sbjct: 177 DTLVLGCTHYPFLEGAISYVMGPDVSLVSSDSETAKDVYRQLVSRDLLAGPDATPRHRYE 236
Query: 252 LSG-KPDIAMRRLMQGFG 268
+G D +R + G
Sbjct: 237 ATGSSADDFLRLAHRLMG 254
>gi|53804366|ref|YP_113738.1| glutamate racemase [Methylococcus capsulatus str. Bath]
gi|81682254|sp|Q609F9|MURI_METCA RecName: Full=Glutamate racemase
gi|53758127|gb|AAU92418.1| glutamate racemase [Methylococcus capsulatus str. Bath]
Length = 271
Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats.
Identities = 65/256 (25%), Positives = 114/256 (44%), Gaps = 6/256 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I +FDSG+GGL VL+++R ++P + +YVAD PYGN +++R +
Sbjct: 4 NEHPIGVFDSGVGGLSVLREIRAVLPHENLLYVADSGHLPYGNKPAEYIEQRAL-TVGRF 62
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L V+ACNTA +R+ F + +G P +K A A ++S ++ +L+T T
Sbjct: 63 LLSRGAKAIVVACNTATAAAITVMRAEF-RVPVIGMEPGLKPAVALSKSLVVGVLATEGT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L+ +L+ + + + +VE G D +++ E +
Sbjct: 122 LKSAKFRDLVGRTTEKVEVIAQACPGWVEQVERGDLGSPATRDLVRRYTEPAL----ERG 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTHYP + + ++ V ++ ++AR R L R+ LF
Sbjct: 178 ADTLVLGCTHYPFLAGLIADVAGPDVHIVETGSAVARHLRRRLEADGLLTRRMAPGVELF 237
Query: 252 LSGKPDIAMRRLMQGF 267
S P R +
Sbjct: 238 WSSGPAEVAGRSLAVL 253
>gi|229108454|ref|ZP_04238071.1| Glutamate racemase [Bacillus cereus Rock1-15]
gi|228675081|gb|EEL30308.1| Glutamate racemase [Bacillus cereus Rock1-15]
Length = 265
Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats.
Identities = 49/253 (19%), Positives = 98/253 (38%), Gaps = 5/253 (1%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+ DSG+GGL V ++ +P+ Y+ D+ PYG ++ + + L ++
Sbjct: 1 MLDSGVGGLTVASEIIRQLPKESIYYIGDNKRCPYGPRSVEEVQSFVFEMVE-FLKQFPL 59
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
V+ACNTA EL+ P + A T+ G I ++ T T++
Sbjct: 60 KTLVVACNTAAAAALTELQEALSIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIKSNMY 119
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+H + +H + LA+ VE + ++++ + + D ++L
Sbjct: 120 EKALHELDTYLEVHSYACPTLATVVENQLE----DTAYVTQQVKQALLPLTKEDIDTLIL 175
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257
CTHYPL+ ++ + + +++ A +L + H F +G
Sbjct: 176 GCTHYPLLESYIKKELGEDITIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTGSVL 235
Query: 258 IAMRRLMQGFGLK 270
+ G +
Sbjct: 236 SFEHIAERWLGYQ 248
>gi|167565061|ref|ZP_02357977.1| glutamate racemase [Burkholderia oklahomensis EO147]
Length = 290
Score = 227 bits (580), Expect = 1e-57, Method: Composition-based stats.
Identities = 72/263 (27%), Positives = 112/263 (42%), Gaps = 9/263 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ I IFDSG+GGL VL+ +R +P+ +YVAD PYG +D + +R + +
Sbjct: 12 SPARAPIGIFDSGLGGLSVLRAVRARLPDEALVYVADSRHAPYGPRDDAFIVERTLAI-G 70
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L V+ACNTA +R P + +G P IK AA ++++ + +L+T
Sbjct: 71 EWLAAQGAKALVVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQ 129
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
ATLR T LI + C + L VE G E++ + G
Sbjct: 130 ATLRSTRFEALIARHADDCRFICQAGHGLVEAVERGDTG----SPELRALLTGYLEPMLA 185
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT---HQTRVFD 246
D +VL CTHYP + R ++ + +D SD+IAR+ +L +
Sbjct: 186 AGADTLVLGCTHYPFLDAAIRDVASDRLHLIDTSDAIARQLSRILDERGLRAPAAAQPAP 245
Query: 247 DHALFLSGKPDIAMRRLMQGFGL 269
L + GL
Sbjct: 246 LPRLCSTSDGRHLQTLASTLLGL 268
>gi|114045687|ref|YP_736237.1| glutamate racemase [Shewanella sp. MR-7]
gi|122945064|sp|Q0I0C5|MURI_SHESR RecName: Full=Glutamate racemase
gi|113887129|gb|ABI41180.1| glutamate racemase [Shewanella sp. MR-7]
Length = 272
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 79/266 (29%), Positives = 133/266 (50%), Gaps = 11/266 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL ++R L+P +++ Y+ D+ PYG E+ L + L +
Sbjct: 1 MSQPILVFDSGIGGLSVLAEIRKLLPHHNYCYLFDNARLPYGELEEQELISGCVALIDQV 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+++ + V+ACNTA T++ LR+T S+ +G VPAIK AA ++S I +L+TP T
Sbjct: 61 VERTHAAIVVVACNTASTVVLPALRATL-SIPVVGVVPAIKPAAQLSKSKRIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT LI + CH+ L S L E+ ++ +
Sbjct: 120 VKRHYTYELISQFADDCHVELFGSSELVLMAEQKIATGQLD----MARLAQVLSPIVEAD 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA-- 249
DV+VL CTH+P++ +Q+ V LD+ ++IA+R + LL + Q D +
Sbjct: 176 LDVLVLGCTHFPMLRDELQQVLGKGVTLLDSGEAIAKRVKTLLAETKSEQQVQEDANRDS 235
Query: 250 ----LFLSGKPDIAMRRLMQGFGLKS 271
+ + + ++ G +
Sbjct: 236 VMQAFYTKAEISEGLASMLVDCGFST 261
>gi|313835875|gb|EFS73589.1| glutamate racemase [Propionibacterium acnes HL037PA2]
gi|314927125|gb|EFS90956.1| glutamate racemase [Propionibacterium acnes HL044PA1]
gi|314970768|gb|EFT14866.1| glutamate racemase [Propionibacterium acnes HL037PA3]
gi|328906033|gb|EGG25808.1| glutamate racemase [Propionibacterium sp. P08]
Length = 284
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 103/260 (39%), Gaps = 8/260 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + I IFDSG GGL V + + LMP +Y+ D PYG ++ +
Sbjct: 9 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRHYALQCLDR- 67
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + +IACNTA + + + R + +PA ++A++ T++G I ++ T AT
Sbjct: 68 LVAHGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASSATRNGRIGVICTEAT 127
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
R + + + + + VEE E++ +
Sbjct: 128 ARSLSYEDALAAV-PGITLTTQACPKFVPFVEEGITSG----PELEAIARQYLAPIQEAG 182
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ + + V + +S AR + L +R + F
Sbjct: 183 CDTLILGCTHYPLLAGLIAYVLGDDVTLISSSHQCARASYSLTAESGLLHSRPRESSRYF 242
Query: 252 -LSGKPDIAMRRLMQGF-GL 269
+G + R + G
Sbjct: 243 LTTGNAERFERLGRRLMEGF 262
>gi|205354293|ref|YP_002228094.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|226707590|sp|B5REZ1|MURI_SALG2 RecName: Full=Glutamate racemase
gi|205274074|emb|CAR39081.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|326629417|gb|EGE35760.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9]
Length = 283
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 86/276 (31%), Positives = 148/276 (53%), Gaps = 8/276 (2%)
Query: 1 MKIDNYPCE----KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWE 56
++ +N PC + + ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG
Sbjct: 5 LQDENTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKS 64
Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
+ + +R++ + + + +Y L+VIACNTA T+ LR F + +G VPAIK AA
Sbjct: 65 ETFIVERVVEIATAVQQRYPLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAAR 123
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
T +G++ +L+T AT++R YT LI + ++C I ++ S L E G + +E+
Sbjct: 124 LTANGVVGLLATRATVKRPYTHELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEEL 183
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
++ + E D +VL CTH+PL+ Q+ P +D+ +IARR LL
Sbjct: 184 RRILRPWLRMPEPP--DTVVLGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLLEH 241
Query: 237 INTHQTRVFDDHALFLSGKP-DIAMRRLMQGFGLKS 271
+ A ++ P + ++Q +G ++
Sbjct: 242 EAPDAKSTDANIAYCMAMTPGAEQLLPILQRYGFET 277
>gi|160915680|ref|ZP_02077888.1| hypothetical protein EUBDOL_01688 [Eubacterium dolichum DSM 3991]
gi|158432156|gb|EDP10445.1| hypothetical protein EUBDOL_01688 [Eubacterium dolichum DSM 3991]
Length = 258
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 68/259 (26%), Positives = 120/259 (46%), Gaps = 5/259 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ + I IFDSG+GG+ VL+++ LMP+ + +Y D PYG + +R +
Sbjct: 1 MNVNSPIGIFDSGMGGISVLKQIHALMPQENLLYFGDSAYAPYGEKSRAEITERCYSICE 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ K + VIACNTA + +ELR + ++ +G PA+K AA Q I +L+T
Sbjct: 61 FFMRK-KVKAIVIACNTATSACVNELRKRYLNIPIIGMEPALKVAADNEQQQHILVLATY 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
TL+ ++L+ + I+ L VEE+ E+ +K+ +
Sbjct: 120 FTLKEKKFADLMARCEKEHIIYKQPCPALVHIVEEHKLQ---DEELVKQTLRNYLAPYNL 176
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDH 248
+ + IVL CTH+ +L P + +D + A++ + LL + QT+
Sbjct: 177 EEINSIVLGCTHFVFYRKYLTELLPKHIAIIDGNTGTAKQVKHLLEERDLLKQTKDIGAI 236
Query: 249 ALFLSGKPDIAMRRLMQGF 267
++ S + D ++ L Q
Sbjct: 237 EIYNSLEDDKDIQDLAQEL 255
>gi|227540150|ref|ZP_03970199.1| possible glutamate racemase [Sphingobacterium spiritivorum ATCC
33300]
gi|227240011|gb|EEI90026.1| possible glutamate racemase [Sphingobacterium spiritivorum ATCC
33300]
Length = 275
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 59/261 (22%), Positives = 98/261 (37%), Gaps = 8/261 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG GGL V ++++ +PEY +IY+ D+ PYGN + + L
Sbjct: 8 NSPIGVFDSGYGGLSVFKEIKKELPEYDYIYLGDNARIPYGNRSFETVYQFTKECVFK-L 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAF---LGAVPAIKQAAAYTQSGLISILSTP 129
L ++ACNTA ++ P + YT + I IL+T
Sbjct: 67 FDLGCDLVILACNTASAKALRSIQQHDLPPGKKVLGVIRPTTEIIKEYTTTNKIGILATT 126
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ I+ + + + VE + ++K+I +
Sbjct: 127 GTVKSESYKIEINKFYPEIEVFQHDCPFWVPLVENNEIDTEGARYFVEKDIHELLSQ--S 184
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRVFDD 247
D IVLACTHYPL++ V +Q P + + +A + L R
Sbjct: 185 SDIDTIVLACTHYPLLLPVIKQFVPPHIQIISQGPIVAHSLKNYLERHPEVEQNCSKGST 244
Query: 248 HALFLSGKPDIAMRRLMQGFG 268
F + + FG
Sbjct: 245 LQFFTTDDASGFEEKAEIFFG 265
>gi|110801992|ref|YP_699819.1| glutamate racemase [Clostridium perfringens SM101]
gi|168213495|ref|ZP_02639120.1| glutamate racemase [Clostridium perfringens CPE str. F4969]
gi|123145852|sp|Q0SPY8|MURI_CLOPS RecName: Full=Glutamate racemase
gi|110682493|gb|ABG85863.1| glutamate racemase [Clostridium perfringens SM101]
gi|170715052|gb|EDT27234.1| glutamate racemase [Clostridium perfringens CPE str. F4969]
Length = 260
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 68/259 (26%), Positives = 111/259 (42%), Gaps = 6/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I FDSG+GGL VL+K +MP ++IY D PYG ++ F + L
Sbjct: 7 NAPIGFFDSGLGGLSVLRKALEMMPNENYIYYGDSKHAPYGEKTPQEIRSLS-FNAIEFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K VIACNTA + +LR + + +G PA+K A ++G + +++T ATL
Sbjct: 66 IKKGAKAIVIACNTATSAAAHDLREYYKDIPIIGIEPALKPAIKLHETGSVIVMATKATL 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ NL+ Y + + L +E ++ +E+K + +
Sbjct: 126 TQEKFKNLMDKYGEHREVIPLPCPGLVEFIE----AGNLEGEEVKNFLREKLNPYMDREI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALF 251
IVL CTHYP + V + + VD +D S R + L N + D +F
Sbjct: 182 SSIVLGCTHYPFVKDVIQDIVGEKVDIIDGSSGTIRELKRRLEENNMQSELKKKGDLDIF 241
Query: 252 LSGKPDIAMRRLMQGFGLK 270
S + + + + +K
Sbjct: 242 NSLEDNKILELSKKLIEIK 260
>gi|167572233|ref|ZP_02365107.1| glutamate racemase [Burkholderia oklahomensis C6786]
Length = 290
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 71/263 (26%), Positives = 111/263 (42%), Gaps = 9/263 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ I IFDSG+GGL VL+ +R +P+ +YVAD PYG +D + +R + +
Sbjct: 12 SPARAPIGIFDSGLGGLSVLRAVRARLPDEALVYVADSRHAPYGPRDDAFIVERTLAI-G 70
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L V+ACNTA +R P + +G P IK AA ++++ + +L+T
Sbjct: 71 EWLAAQGAKALVVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQ 129
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
ATLR LI + C + L VE G E++ + G
Sbjct: 130 ATLRSARFEALIARHADDCRFICQAGHGLVEAVERGDTG----SPELRALLTGYLEPMLA 185
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT---HQTRVFD 246
D +VL CTHYP + R ++ + +D SD+IAR+ +L +
Sbjct: 186 AGADTLVLGCTHYPFLDAAIRDVASDRLHLIDTSDAIARQLSRILDERGLRAPAAAQPAP 245
Query: 247 DHALFLSGKPDIAMRRLMQGFGL 269
L + GL
Sbjct: 246 LPRLCSTSDGRHLQTLASTLLGL 268
>gi|323465948|gb|ADX69635.1| Glutamate racemase [Lactobacillus helveticus H10]
Length = 267
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 53/257 (20%), Positives = 100/257 (38%), Gaps = 7/257 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I + DSG+GG V++K+ +P +++ D PYG+ + + L
Sbjct: 3 NRPIGLLDSGVGGFTVVKKVIEKLPHESTVFIGDSANMPYGDKSREQIIELTRRSV-KFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + L + ACNTA + L++ AA T++ +++ +TP T+
Sbjct: 62 LQKKVKLIIFACNTATAVAMPTLQNEVEQQIIGVIQSGSLAAARTTKNKKVAVAATPVTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + V++ LA +E + D ++ + +
Sbjct: 122 NSHAYQKEIKFRDPDIKVMEVAAPELAPLIE-----SQKDYDTNLAAVKRSIAPLKDQDF 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALF 251
D VL CTHYPLI + F + + +D +D +A+ ++ R + H +
Sbjct: 177 DTFVLGCTHYPLIQNEFAEALGDKIQIVDPADQVAQYTFNVMRRDGLFSSFDQAGKHEYY 236
Query: 252 LSGKPDIAMRRLMQGFG 268
+G PD + G
Sbjct: 237 TTGDPDKFSEMERRFLG 253
>gi|270265151|ref|ZP_06193413.1| glutamate racemase [Serratia odorifera 4Rx13]
gi|270040785|gb|EFA13887.1| glutamate racemase [Serratia odorifera 4Rx13]
Length = 260
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 89/257 (34%), Positives = 139/257 (54%), Gaps = 6/257 (2%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V Q++R L+P+ H+IY D+V FPYG + + +R++ + S + ++
Sbjct: 2 LVFDSGVGGLSVYQEVRQLLPDLHYIYAFDNVAFPYGEKSEEFIVERVLEIVSAVQQRHP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
+ VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T T++RTY
Sbjct: 62 LAIVVIACNTASTVSLPALRERF-TFPVVGVVPAIKPAARLTANGVVGLLATRGTVQRTY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + + C I L+ S L E G + +KK + +E D +V
Sbjct: 121 THELIARFATDCKIELLGSSELVELAEAKLHGEAVPLATLKKILHPWLSMREPP--DTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF--LSG 254
L CTH+PL+ Q+ P +D+ +IARR L+ + D+ A L+
Sbjct: 179 LGCTHFPLLAEELMQVLPEGTRLVDSGAAIARRTAWLISSQENLVSTQEDNLAYCMALNE 238
Query: 255 KPDIAMRRLMQGFGLKS 271
D + ++QG+G KS
Sbjct: 239 DTDALL-PVLQGYGFKS 254
>gi|90961813|ref|YP_535729.1| glutamate racemase [Lactobacillus salivarius UCC118]
gi|90821007|gb|ABD99646.1| Glutamate racemase [Lactobacillus salivarius UCC118]
Length = 256
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 64/260 (24%), Positives = 114/260 (43%), Gaps = 8/260 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K I +FDSG+GG+ VL+++ +MP +I+ D PYG ++K
Sbjct: 4 KKDAPIGVFDSGMGGISVLRELVKIMPNEDYIFFGDSANAPYGIKTVEEVQKLSFEKVE- 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L Y V+ACNTA + ELR+ +P + +G PA+K A + + + +++TP
Sbjct: 63 HLLSYNCKAIVVACNTATSAAIKELRAAYPDLIIVGLEPALKPAVEHKKDSKVGVMATPL 122
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TL+ ++L++ YV++ I + + L +E + E++ + +
Sbjct: 123 TLKEKKFNDLMNKYVTEADIRKIPAPDLVEFIE----SGDVDSPELETYLRNLLSPYKDS 178
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249
D IVL CTH+P V +++ +D + AR + LL + N +
Sbjct: 179 --DSIVLGCTHFPFAKKVIQKIMGDDTFIVDGGEGAARETKHLLEKSNLLSDKTEKGSVK 236
Query: 250 LFLSGKPDIAMRRLMQGFGL 269
S + + F L
Sbjct: 237 FENSRNTKEELELSQKLFNL 256
>gi|297620368|ref|YP_003708505.1| Glutamate racemase [Waddlia chondrophila WSU 86-1044]
gi|297375669|gb|ADI37499.1| Glutamate racemase [Waddlia chondrophila WSU 86-1044]
Length = 276
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 109/258 (42%), Gaps = 7/258 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
N+I +FDSG+GGL V++ + +P+ IY D PYG + + + S L
Sbjct: 2 NAIAVFDSGLGGLTVVKALCEHLPQEEIIYFGDTARVPYGGKSRETVIRYAREI-SAFLL 60
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ VI CNTA D L + + + + + + Q+ I++L T AT+R
Sbjct: 61 SQEIKALVIGCNTASAYAADLL-AAELELPVFNVIDPLIEEISACQAEHIAVLGTAATVR 119
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + + +S + VEE+ + +E + +R D
Sbjct: 120 SGIYQARLAQKIPNVKVTGISCPLFVPIVEEHFQNH----PAARLIVEEYLFRVKDERMD 175
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALFL 252
+VL CTHYPL+ + R+ V +D++ + A++ + L + + V F+
Sbjct: 176 TVVLGCTHYPLLYCLIREYLGDEVRIVDSASACAKQIQAALFSHPFNNSLSVKGKLKYFV 235
Query: 253 SGKPDIAMRRLMQGFGLK 270
S P+ Q G++
Sbjct: 236 SDDPERFKHLGEQFLGVE 253
>gi|116512125|ref|YP_809341.1| glutamate racemase [Lactococcus lactis subsp. cremoris SK11]
gi|123025382|sp|Q02YQ3|MURI_LACLS RecName: Full=Glutamate racemase
gi|116107779|gb|ABJ72919.1| glutamate racemase [Lactococcus lactis subsp. cremoris SK11]
Length = 271
Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 100/258 (38%), Gaps = 7/258 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I + DSG+GGL V +++ +P +Y+ D PYG + + + +L
Sbjct: 3 NRPIGLLDSGVGGLTVARELLRQLPNEEIVYIGDTRRAPYGPRSREQIIAFTWDMVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + V+ACNTA + + ++ +P A T++ I +++T A++
Sbjct: 63 SK-NVKMIVMACNTATAMTLEIVKEELDIPVIGVILPGASSAIQKTKTNKIGVIATQASI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R I S + ++ S VE ++ + K+ + GK
Sbjct: 122 RSDEYHKTIARKSSAIEVLSLACPKFVSIVESNE----MESEIAKRVVSESLAPLVGK-I 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALF 251
D ++L CTHYPL+ + ++ V +D+ R LL + + H +
Sbjct: 177 DTLILGCTHYPLLRSLIQETMGKEVRLIDSGAEAVRDISVLLNYFEINAHERKEYQHCFY 236
Query: 252 LSGKPDIAMRRLMQGFGL 269
+ + + +
Sbjct: 237 TTAGVNSFREIAEKWLNI 254
>gi|257063632|ref|YP_003143304.1| glutamate racemase [Slackia heliotrinireducens DSM 20476]
gi|256791285|gb|ACV21955.1| glutamate racemase [Slackia heliotrinireducens DSM 20476]
Length = 307
Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats.
Identities = 52/270 (19%), Positives = 91/270 (33%), Gaps = 16/270 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG GGL +++ LMP +Y D PYG + + + L
Sbjct: 22 NAPIGVFDSGYGGLTCAREIAELMPNESIVYFGDTARCPYGPRDQAEV-DLFVQQIGAWL 80
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA + + TF P + AA T++ + ++ T T+
Sbjct: 81 MDKGVKMLVIACNTATAAGLEHAQQTFSVPILGAVEPGARAAARTTKNRKVGVIGTKGTI 140
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC-------------GIKIKEDEIKKE 179
I + + + ++ VE E +
Sbjct: 141 ESGCYPRAIRNIDAGITVFSTATPRFVEIVENGIRLAKGPFEDLTSSVSKVYIRPEFRTI 200
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
D +VLACTHYP++ + + V + +++ +A+ +L
Sbjct: 201 AIEYLEPLRRCEIDTLVLACTHYPMLKALIGGVIGTNVRLVSSAEELAKDVHDVLSMRGQ 260
Query: 240 HQTRVF-DDHALFLSG-KPDIAMRRLMQGF 267
+H F + D + F
Sbjct: 261 LADPNHVGEHRFFTTSTDVDEFQAFGSRVF 290
>gi|212703906|ref|ZP_03312034.1| hypothetical protein DESPIG_01959 [Desulfovibrio piger ATCC 29098]
gi|212672609|gb|EEB33092.1| hypothetical protein DESPIG_01959 [Desulfovibrio piger ATCC 29098]
Length = 276
Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats.
Identities = 62/262 (23%), Positives = 102/262 (38%), Gaps = 3/262 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
I IFDSG+GGL VL+ + +P + +Y+ D PYG + + +
Sbjct: 2 NPSASLPIGIFDSGMGGLTVLKAISGRLPGENLLYLGDTARLPYGTKSRDTIIRYTLKAA 61
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L + V+ACNTA + ELR F + LG V P + A A +++ I +++
Sbjct: 62 GR-LVDEGVKMLVVACNTATSAALPELREHFAPLPVLGVVRPGAEAAVAASRNKRIVVIA 120
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT+ I S + + + + EE I E + + F +
Sbjct: 121 TEATIAGGAYQQAIASLCPEARVQGRACTLFVPLAEEGWMDGPIVEGIASRYLGDLFSPE 180
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPRINTHQTRVFD 246
R D +VL CTH+PL R + V +D++++ A L +
Sbjct: 181 RPDRPDTLVLGCTHFPLFREALRHVVGEDVRIVDSAETAAVAVEDRLRELDLLRREDAPG 240
Query: 247 DHALFLSGKPDIAMRRLMQGFG 268
H + +R G
Sbjct: 241 THRFMTTDNVLRFIRTGSLFLG 262
>gi|229821218|ref|YP_002882744.1| glutamate racemase [Beutenbergia cavernae DSM 12333]
gi|259509810|sp|C5BY82|MURI_BEUC1 RecName: Full=Glutamate racemase
gi|229567131|gb|ACQ80982.1| glutamate racemase [Beutenbergia cavernae DSM 12333]
Length = 292
Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats.
Identities = 58/269 (21%), Positives = 98/269 (36%), Gaps = 19/269 (7%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + +P +YV D PYG +++ + + L
Sbjct: 3 DAPIGIFDSGVGGLTVARAVLDQLPHESVLYVGDTARTPYGPRPIAQVREYSLEILD-SL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPS---MAFLGAVPAIKQAAAYTQSGLISILSTP 129
VIACN+A + + R + PA+++AAA T++G I ++ T
Sbjct: 62 VASGVKALVIACNSASAAMLADARERYEGDGVPVVEVIRPAVRRAAAATRNGRIGVIGTR 121
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ + + Q +H + VE+ +
Sbjct: 122 ATISSRAYEDAFAA-APQLQLHTRACPDFVELVEDGETSG----PAVLASAHAYLDPLRD 176
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT------- 242
D +VL CTHYPL+ + V + +++ A L + ++
Sbjct: 177 AGVDTLVLGCTHYPLLAGAISYVMGEGVTLVSSAEETALDVYRTLVAHDLLRSADGARGD 236
Query: 243 ---RVFDDHALFLSGKPDIAMRRLMQGFG 268
R H +G P R + G
Sbjct: 237 DGARSAPRHRFLATGDPAAFTRLARRFLG 265
>gi|260890743|ref|ZP_05902006.1| glutamate racemase [Leptotrichia hofstadii F0254]
gi|260859621|gb|EEX74121.1| glutamate racemase [Leptotrichia hofstadii F0254]
Length = 261
Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats.
Identities = 55/254 (21%), Positives = 100/254 (39%), Gaps = 9/254 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGGL VL+++R ++P Y D PYG + + + L +
Sbjct: 3 IGVFDSGIGGLTVLKEIRKVLPNEKIYYFGDTARVPYGEKTKELIIRYSKEIVE-FLLEK 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA L EL+ F + A T+S I ++ T AT++
Sbjct: 62 DVSAIVVACNTATALALKELKEIFKIPIIGVIEAGARTAINTTKSNEIGVIGTKATIKSE 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
I + + + + + VEE K+ IK ++ D +
Sbjct: 122 KYIEEIKLFNPKVKVFQKACPLFVPAVEEGILSGKLVNQIIKTYLDDF-----EGEIDTL 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFDDHALFLS 253
+L CTHYPL+ ++ P + +D + A + +L + + ++ +++
Sbjct: 177 ILGCTHYPLLKDAISKIYP-DIKIVDPAKETALDLKSILQKNKFLKNDALKNEEVDYYVT 235
Query: 254 GKPDIAMRRLMQGF 267
+ +
Sbjct: 236 DGQEKFKEIGIMFL 249
>gi|317050042|ref|YP_004117690.1| glutamate racemase [Pantoea sp. At-9b]
gi|316951659|gb|ADU71134.1| glutamate racemase [Pantoea sp. At-9b]
Length = 284
Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats.
Identities = 79/261 (30%), Positives = 136/261 (52%), Gaps = 4/261 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
L+ ++L+FDSG+GGL V +++R L+P H++Y D+ GFPYG + + R++ +
Sbjct: 18 SDLRPTVLVFDSGVGGLSVYEEIRQLLPNLHYLYAFDNEGFPYGEKTETYIVDRVVSIVE 77
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
I + L VIACN+A T+ LR+ F +G VPAIK AA T++G++ +L+T
Sbjct: 78 AITQHFPLALVVIACNSASTVSLPALRAKF-DFPVVGVVPAIKPAARLTRNGVVGLLATR 136
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++R YT L+ + +C I ++ S L E G ++ D++++ ++ KE
Sbjct: 137 GTVKRPYTHELVAQFARECQIKMLGSAELVELAEAKLHGEEVLLDDVRRVVQPWLRMKEP 196
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D +VL CTH+PL+ + + P +D+ +IARR LL + A
Sbjct: 197 P--DTVVLGCTHFPLLRDELQLVLPEGTRLVDSGAAIARRTAWLLEHAAPVALSDAPNMA 254
Query: 250 LFLSGKPDIAM-RRLMQGFGL 269
++ ++Q +G
Sbjct: 255 FCTRMDEEVLQLSPVLQRYGF 275
>gi|304390777|ref|ZP_07372729.1| glutamate racemase [Mobiluncus curtisii subsp. curtisii ATCC 35241]
gi|304325660|gb|EFL92906.1| glutamate racemase [Mobiluncus curtisii subsp. curtisii ATCC 35241]
Length = 271
Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats.
Identities = 57/265 (21%), Positives = 95/265 (35%), Gaps = 14/265 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I IFDSG+GGL V + + +P Y+ D PYG +K+ + +
Sbjct: 4 NNAPIGIFDSGLGGLTVARSIIDQLPGESVTYIGDTANSPYGTKPVERVKELSLSVMDK- 62
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL---GAVPAIKQAAAYTQSGLISILST 128
L + VIACNTA RS + + PA+ +A + T++G I +++T
Sbjct: 63 LVDRGVKMLVIACNTASATAVFAARSKYDELGIPVLEVISPAVHRAVSATRNGHIGVIAT 122
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+ +H+Y Q + + VE E+
Sbjct: 123 HTTIETETYQRALHAY-QQVQVSAKACPAFVDFVERGITSG----PELLAVAREYLEPIR 177
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV---- 244
D +VL CTHYPL+ + + V + +++ A L + T
Sbjct: 178 DAGVDTLVLGCTHYPLLSGIISYVMGPEVTLVSSAEETAHDVYRQLLDKDWLNTDDGTDT 237
Query: 245 -FDDHALFLSGKPDIAMRRLMQGFG 268
+ +G R + G
Sbjct: 238 VNPRYQFLATGDTQTFTRLARRFLG 262
>gi|283787352|ref|YP_003367217.1| glutamate racemase [Citrobacter rodentium ICC168]
gi|282950806|emb|CBG90482.1| glutamate racemase [Citrobacter rodentium ICC168]
Length = 283
Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats.
Identities = 79/260 (30%), Positives = 139/260 (53%), Gaps = 4/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + +
Sbjct: 21 RPTVLVFDSGVGGLSVYDEIRQLLPDLHYIYAFDNVAFPYGEKSEEFIVERVVEIVTAVQ 80
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T T+
Sbjct: 81 QRSPLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGIVGLLATRGTV 139
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT LI + ++C I ++ S L E G + +E+++ + +
Sbjct: 140 KRPYTHELIARFANECQIAMLGSAELVELAEAKLHGKPVPLEELQRILRPWLRM--SEPP 197
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PL+ + P +D+ +IARR LL + A +
Sbjct: 198 DTVVLGCTHFPLLKEELLHVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSTAANIAYCM 257
Query: 253 SGKPD-IAMRRLMQGFGLKS 271
+ P+ + ++Q +G ++
Sbjct: 258 ALTPETEQLLPVLQRYGFET 277
>gi|260595994|ref|YP_003208565.1| glutamate racemase [Cronobacter turicensis z3032]
gi|260215171|emb|CBA26986.1| Glutamate racemase [Cronobacter turicensis z3032]
Length = 288
Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats.
Identities = 82/262 (31%), Positives = 141/262 (53%), Gaps = 4/262 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ + +IL+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + +
Sbjct: 23 SEARPTILVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFIVERVVEIVT 82
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ +Y L+VIACN+A T+ LR F + +G VPAIK AA T +G++ +L+T
Sbjct: 83 AVQARYPLALAVIACNSASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATR 141
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++R YT LI + ++C I ++ S L E G + + +++ + E
Sbjct: 142 GTVKRPYTHELIARFANECQIEMLGSAELVEIAEAKLHGEPVSLEALRRVLRPWLRMPEP 201
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D +VL CTH+PL+ Q+ P +D+ +IARR LL ++ A
Sbjct: 202 P--DTVVLGCTHFPLLADELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDACSFDENIA 259
Query: 250 LFLSGKPDIAM-RRLMQGFGLK 270
++ P++A ++Q +G
Sbjct: 260 YCMALTPEVAQLMSVLQRYGFN 281
>gi|317131748|ref|YP_004091062.1| glutamate racemase [Ethanoligenens harbinense YUAN-3]
gi|315469727|gb|ADU26331.1| glutamate racemase [Ethanoligenens harbinense YUAN-3]
Length = 271
Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats.
Identities = 58/252 (23%), Positives = 101/252 (40%), Gaps = 4/252 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL V++ + +P IY D PYG + + K + L
Sbjct: 3 NRPIGVFDSGLGGLTVIRALERTLPHEDLIYFGDTGRVPYGTKGNDTIVKYSEQIV-RFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ +IACNT ++ +E+ + F PA++ A T+ G I +L T AT+
Sbjct: 62 RGFDVKAILIACNTVSSVAFEEVCAQAGVPVFGVVEPAVEAAVRTTRGGEILVLGTSATV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R IH Y+ + + + VE + E+ G+
Sbjct: 122 RSGAYEQAIHRYLPDAGVRSRACPLFVPLVENGHFAAGDQLAEL--AAHEYLDSFIGQGV 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA-LF 251
D ++L CTHYP++ + ++ V+ +D+ +A RA + R +
Sbjct: 180 DTVILGCTHYPILRSLIAKIMGGQVELVDSGCEMAVRAAVAMDERGLLTDREEPGRQNFY 239
Query: 252 LSGKPDIAMRRL 263
+S + R
Sbjct: 240 VSDYSEDFTRLA 251
>gi|329919573|ref|ZP_08276562.1| glutamate racemase [Lactobacillus iners SPIN 1401G]
gi|328937378|gb|EGG33800.1| glutamate racemase [Lactobacillus iners SPIN 1401G]
Length = 261
Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats.
Identities = 54/255 (21%), Positives = 96/255 (37%), Gaps = 7/255 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I I DSG+GGL VL+K+ +P I++ D PYG+ + L
Sbjct: 3 NRPIGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIINLTRASV-KFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + CNTA ++ P A+ TQ+ +++++T AT+
Sbjct: 62 LTKNVKVIIFGCNTATAAAMSVIQQEIPMQIIGVIQSGALAASKITQTNQVAVIATNATV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I +Q + + LA VE ++ + C + +
Sbjct: 122 NSHSYVKEIAFRNAQIQVTELGEPKLAPLVEAN-----PSDEIKMAVVAQCLAPLKHVQY 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYPL++ + +D +D +A+ +L R N H +
Sbjct: 177 DTLILGCTHYPLLIKEIAEFIGKDKKIVDPADQVAQYTFNVLKRDNLLA-EKGGKHEYYT 235
Query: 253 SGKPDIAMRRLMQGF 267
+G P M+ +
Sbjct: 236 TGDPIKFMKIAQKWM 250
>gi|229028645|ref|ZP_04184759.1| Glutamate racemase [Bacillus cereus AH1271]
gi|228732664|gb|EEL83532.1| Glutamate racemase [Bacillus cereus AH1271]
Length = 281
Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats.
Identities = 50/255 (19%), Positives = 98/255 (38%), Gaps = 5/255 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSG+GGL V ++ +P+ Y+ D+ PYG ++ + + L ++
Sbjct: 13 IGVLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFVFEMVE-FLKQF 71
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA L+ P + A T+ G I ++ T T++
Sbjct: 72 PLKALVVACNTAAAAALTALQEALSIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIQSN 131
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+H + +H + LA+ VE + ++++ + + D +
Sbjct: 132 MYEKALHELDTYLEVHSHACPTLATVVENQLE----DTAYVTEQVKQALLPLTKEDIDTL 187
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYPL+ ++ V + +++ A +L + H F +G
Sbjct: 188 ILGCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDDLNPKHRFFTTGY 247
Query: 256 PDIAMRRLMQGFGLK 270
+ G +
Sbjct: 248 ALSFGHIAERWLGYQ 262
>gi|300214554|gb|ADJ78970.1| Glutamate racemase [Lactobacillus salivarius CECT 5713]
Length = 256
Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats.
Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 8/260 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K I +FDSG+GG+ VL+++ +MP +I+ D PYG ++K
Sbjct: 4 KKDAPIGVFDSGMGGISVLRELVKIMPNEDYIFFGDSANAPYGIKTVEEVQKLSFEKVE- 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L Y V+ACNTA + ELR+ +P + +G PA+K A + + + +++TP
Sbjct: 63 HLLSYNCKAIVVACNTATSAAIKELRAAYPDLIIVGLEPALKPAVEHKKDSKVGVMATPL 122
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TL+ ++L++ YV++ I + + L +E + E++ ++ +
Sbjct: 123 TLKEKKFNDLMNKYVTKADIRKIPAPDLVEFIE----SGDVDSPELETYLQKLLSPYKDS 178
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHA 249
D IVL CTH+P V +++ +D + AR + LL + N +
Sbjct: 179 --DSIVLGCTHFPFAKKVIQKIMGDDTFIVDGGEGAARETKHLLEKSNLLSDKTEKGSVK 236
Query: 250 LFLSGKPDIAMRRLMQGFGL 269
S + + F L
Sbjct: 237 FENSRNTKEELELSQKLFNL 256
>gi|268593423|ref|ZP_06127644.1| glutamate racemase [Providencia rettgeri DSM 1131]
gi|291311122|gb|EFE51575.1| glutamate racemase [Providencia rettgeri DSM 1131]
Length = 287
Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats.
Identities = 75/264 (28%), Positives = 136/264 (51%), Gaps = 4/264 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
++ +IL+FDSG+GGL V ++++ ++P H+IY D+ FPYG + + R+ +
Sbjct: 21 NLSVRPTILVFDSGVGGLSVYREVKKMIPNAHYIYAFDNEAFPYGEKSEEFIIDRVYQIV 80
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ I K+ +++IACNTA T+ LR+ F + +G VPAIK A T++G++ +L+T
Sbjct: 81 NAIAAKHPLTIAIIACNTASTVSLPNLRAHF-TFPVVGVVPAIKPATKLTRNGVVGLLAT 139
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+ R YT LI + + C + + S L E G + DE+ + + E
Sbjct: 140 KGTVNREYTKELIERFATDCKVISLGSAELVQLAERKLHGETLPLDEVAQTVRPWIRMPE 199
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
D ++L CTH+PL++ ++ P ++D+ +IARR L+ ++
Sbjct: 200 PP--DTVILGCTHFPLLIEELEKVLPNGTRFIDSGSAIARRTVWLINNQEEIANSEEENF 257
Query: 249 ALF-LSGKPDIAMRRLMQGFGLKS 271
A L ++ +++ G K+
Sbjct: 258 AYCLLMDDNAKGLQPVLEAEGFKT 281
>gi|315656446|ref|ZP_07909335.1| glutamate racemase [Mobiluncus curtisii subsp. holmesii ATCC 35242]
gi|315493005|gb|EFU82607.1| glutamate racemase [Mobiluncus curtisii subsp. holmesii ATCC 35242]
Length = 271
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 57/265 (21%), Positives = 95/265 (35%), Gaps = 14/265 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I IFDSG+GGL V + + +P Y+ D PYG +K+ + +
Sbjct: 4 NNAPIGIFDSGLGGLTVARSIIDQLPGESVTYIGDTANSPYGTKPVERVKELSLSVMDK- 62
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL---GAVPAIKQAAAYTQSGLISILST 128
L + VIACNTA RS + + PA+ +A + T++G I +++T
Sbjct: 63 LVDRGVKMLVIACNTASATAVFAARSKYDELGIPVLEVISPAVHRAVSATRNGHIGVIAT 122
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+ +H+Y Q + + VE E+
Sbjct: 123 HTTIETETYQRALHAY-QQVQVSAKACPAFVDFVERGITSG----PELLAVAREYLEPIR 177
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV---- 244
D +VL CTHYPL+ + + V + +++ A L + T
Sbjct: 178 DAGVDTLVLGCTHYPLLSGIISYVMGPEVTLVSSAEETAHDVYRQLLDKDWLNTDDGADT 237
Query: 245 -FDDHALFLSGKPDIAMRRLMQGFG 268
+ +G R + G
Sbjct: 238 VNPRYQFLATGDTQTFTRLARRFLG 262
>gi|332686497|ref|YP_004456271.1| glutamate racemase [Melissococcus plutonius ATCC 35311]
gi|332370506|dbj|BAK21462.1| glutamate racemase [Melissococcus plutonius ATCC 35311]
Length = 273
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 60/261 (22%), Positives = 107/261 (40%), Gaps = 8/261 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
Q +I + DSG+GGL V++++ +P +FIY+ D PYG+ + + +
Sbjct: 1 MNDQYAIGLIDSGVGGLTVVKELCRQLPNENFIYLGDTAHCPYGSKPTEQVIQYTWQ-MT 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L + + L VIACNTA + +E+++T P + A A T+S I ++ T
Sbjct: 60 NFLLRKKIKLLVIACNTATAAVLEEIKNTLDIPVIGVIAPGARAAIAATKSQRIGVIGTE 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ I V + + ++ VE + K+ + +
Sbjct: 120 GTIKSQAYEKNIKLLVEKSFVSCLACPSFVPLVEM----GNYHTIKAKEIVTKTLAPLKL 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH---QTRVFD 246
K+ D +VL CTHYPL+ + V +D S + + LL N QT
Sbjct: 176 KQLDTLVLGCTHYPLLRSFIQTAIGSQVTLIDPSIETVKEIQDLLAHSNKLTSNQTNNNP 235
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ +G + +
Sbjct: 236 SRKFYTTGSIKTFEKIAIDWL 256
>gi|237745618|ref|ZP_04576098.1| glutamate racemase [Oxalobacter formigenes HOxBLS]
gi|229376969|gb|EEO27060.1| glutamate racemase [Oxalobacter formigenes HOxBLS]
Length = 273
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 68/265 (25%), Positives = 115/265 (43%), Gaps = 13/265 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL VL+ +R +P + IY AD PYG+ + + +R + L
Sbjct: 5 SGPIGVFDSGVGGLSVLRHIRSQLPGENLIYFADSGYAPYGDKSEEFVIERAFKIAGFFL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K V+ACNTA + LR +P + +G P +K AAA T +G++ +++T TL
Sbjct: 65 -KQGIKALVVACNTATAITIHLLREKYPELPIVGVEPGLKPAAAKTITGIVGVMATERTL 123
Query: 133 RRTYTSNLIHSYVSQCHIH--LVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
L Q +H + +A +E + + + + +
Sbjct: 124 ASNKFHVLHQLLNDQTGVHFIMQPCPGMADLIEHEE----LDSEPVFNLVRRYLTPILEQ 179
Query: 191 RTDVIVLACTHYPLIVHVFRQLS----PWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
D +VL CTHYP + HV +++ + +D ++AR+ + LL +
Sbjct: 180 NADTVVLGCTHYPFVRHVIEKIAAEAGNPSLHIIDTGYAVARQLKHLLDIYGLNSKGRET 239
Query: 247 DHAL--FLSGKPDIAMRRLMQGFGL 269
D F SG P R + + +
Sbjct: 240 DIQTAAFTSGDPQTISRLIGRLLQI 264
>gi|309805303|ref|ZP_07699354.1| glutamate racemase [Lactobacillus iners LactinV 09V1-c]
gi|312875202|ref|ZP_07735215.1| glutamate racemase [Lactobacillus iners LEAF 2053A-b]
gi|308165379|gb|EFO67611.1| glutamate racemase [Lactobacillus iners LactinV 09V1-c]
gi|311089309|gb|EFQ47740.1| glutamate racemase [Lactobacillus iners LEAF 2053A-b]
Length = 261
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 55/255 (21%), Positives = 98/255 (38%), Gaps = 7/255 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I I DSG+GGL VL+K+ +P I++ D PYG+ + L
Sbjct: 3 NRPIGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIINLTRASV-KFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + CNTA ++ P A+ TQ+ +++++T AT+
Sbjct: 62 LTKNVKVIIFGCNTATAAAMSVIQQEIPMQIIGVIQSGALAASKITQTNQVAVIATNATV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I +Q + + LA VE ++ K + C + +
Sbjct: 122 NSHSYVKEIAFRNAQIQVTELGEPKLAPLVEAN-----PSDEIKKAVVAQCLAPLKHVQY 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYPL++ + +D +D +A+ +L R N + H +
Sbjct: 177 DTLILGCTHYPLLIREIAEFIGKDKKIVDPADQVAQYTFNVLKRDNLLAAKG-GKHEYYT 235
Query: 253 SGKPDIAMRRLMQGF 267
+G P M+ +
Sbjct: 236 TGDPIKFMKIAQKWM 250
>gi|167578823|ref|ZP_02371697.1| glutamate racemase [Burkholderia thailandensis TXDOH]
Length = 290
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 73/263 (27%), Positives = 116/263 (44%), Gaps = 9/263 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
++ I IFDSG+GGL VL+ +R +P+ +YVAD PYG +D + +R + +
Sbjct: 12 SPARSPIGIFDSGLGGLSVLRAVRERLPDEAIVYVADSRHAPYGPRDDAFIIERTLAI-G 70
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L VIACNTA +R P + +G P IK AA ++++ + +L+T
Sbjct: 71 EWLVAQGAKALVIACNTATAQSIAVVRERLP-IPLVGVEPGIKPAALHSKTRVAGVLATQ 129
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
ATLR LI + + C + L +E G E++ ++ G
Sbjct: 130 ATLRSARFEALIARHAADCRFICQAGHGLVEAIERGDTG----SPELRAQLAGFLEPMLE 185
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT---HQTRVFD 246
D +VL CTHYP + R ++ + +D SD+IAR+ +L +R
Sbjct: 186 AGADTLVLGCTHYPFLDAAIRDVTSSRLHLIDTSDAIARQLARILDERGLRAPASSRPAP 245
Query: 247 DHALFLSGKPDIAMRRLMQGFGL 269
L +G GL
Sbjct: 246 PPRLCSTGDGRHLQTLAATLLGL 268
>gi|304317524|ref|YP_003852669.1| glutamate racemase [Thermoanaerobacterium thermosaccharolyticum DSM
571]
gi|302779026|gb|ADL69585.1| glutamate racemase [Thermoanaerobacterium thermosaccharolyticum DSM
571]
Length = 264
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 55/251 (21%), Positives = 103/251 (41%), Gaps = 8/251 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GGL VL++++ L+P +IY D PYG ++K + ++
Sbjct: 4 RPIGVFDSGVGGLTVLKRLKELLPNEDYIYFGDTKRVPYGEKSKKEIEKYARQIV-HFMN 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ + VIACNT I ++ + + F + AA T++ + +++T T+
Sbjct: 63 EKNTKIIVIACNTTCASID---KNEYSEILFNVLEAGAESAAYLTKNKKVGVIATTRTIE 119
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I S + + VEE DE K + + D
Sbjct: 120 SRSYEKNIKLIDSGIDVFGKACPRFVPLVEEGLAN----SDEAFKCAKEYLSVLNNEEID 175
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTHYP++++ + V +D + ++ + + L +R+ F+S
Sbjct: 176 TLVLGCTHYPILINAIKNAVHKDVIIVDPAIKLSEKVKSYLEENAMLNSRLTGKTEYFVS 235
Query: 254 GKPDIAMRRLM 264
G + +
Sbjct: 236 GNKENFVNTAK 246
>gi|53716293|ref|YP_106352.1| glutamate racemase [Burkholderia mallei ATCC 23344]
gi|121598002|ref|YP_990396.1| glutamate racemase [Burkholderia mallei SAVP1]
gi|124381855|ref|YP_001024891.1| glutamate racemase [Burkholderia mallei NCTC 10229]
gi|126446746|ref|YP_001079232.1| glutamate racemase [Burkholderia mallei NCTC 10247]
gi|167002077|ref|ZP_02267867.1| glutamate racemase [Burkholderia mallei PRL-20]
gi|254176068|ref|ZP_04882726.1| glutamate racemase [Burkholderia mallei ATCC 10399]
gi|254356026|ref|ZP_04972303.1| glutamate racemase [Burkholderia mallei 2002721280]
gi|52422263|gb|AAU45833.1| glutamate racemase [Burkholderia mallei ATCC 23344]
gi|121225800|gb|ABM49331.1| glutamate racemase [Burkholderia mallei SAVP1]
gi|126239600|gb|ABO02712.1| glutamate racemase [Burkholderia mallei NCTC 10247]
gi|148025009|gb|EDK83178.1| glutamate racemase [Burkholderia mallei 2002721280]
gi|160697110|gb|EDP87080.1| glutamate racemase [Burkholderia mallei ATCC 10399]
gi|243062233|gb|EES44419.1| glutamate racemase [Burkholderia mallei PRL-20]
gi|261826533|gb|ABM98669.2| glutamate racemase [Burkholderia mallei NCTC 10229]
Length = 290
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 66/276 (23%), Positives = 110/276 (39%), Gaps = 11/276 (3%)
Query: 1 MKIDNYPCEK--KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58
M P + + I +FDSG+GGL VL+ +R + + +YVAD PYG +D
Sbjct: 1 MTTPYAPDSRAPSARAPIGVFDSGLGGLSVLRAVRERLLDEALVYVADSRHAPYGPRDDV 60
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ +R + + + L V+ACNTA +R P + +G P IK AA ++
Sbjct: 61 FIVERTLAI-GEWLVAQGAKALVVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHS 118
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
++ + +L+T ATLR L+ + + C L +E G ++
Sbjct: 119 KTRVAGVLATQATLRSARFEALLARHAADCRFLCQPGHGLVEAIERGDTG----SPALRA 174
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+ D +VL CTHYP + R ++ + +D D+IAR+ +L
Sbjct: 175 LLASYLEPMLEAGADTLVLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIARQLARVLDERG 234
Query: 239 THQ---TRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
R + GL +
Sbjct: 235 LRAPASPRPAPLPRFCSTSDGRQLQALAATLLGLDA 270
>gi|253999852|ref|YP_003051915.1| glutamate racemase [Methylovorus sp. SIP3-4]
gi|253986531|gb|ACT51388.1| glutamate racemase [Methylovorus sp. SIP3-4]
Length = 273
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 71/259 (27%), Positives = 118/259 (45%), Gaps = 9/259 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ + +FDSG+GGL VL +R +P+ IY AD + PYG+ + R + L SD L
Sbjct: 11 DSPVGVFDSGVGGLSVLAHIRQALPQELLIYAADSMHAPYGSKSQAFIIDRAIQL-SDFL 69
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
V+ACNTA ELRS + + +G PA+K AAA T+SG+I +L+T TL
Sbjct: 70 ISRGAKALVVACNTATAAAISELRSRY-VIPIIGMEPAVKPAAAATRSGVIGVLATSGTL 128
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ SY Q + + + L +E ++ ++ +E
Sbjct: 129 QSAQFAALLESYGRQVRVETQACVGLVECIERGE----LQTAATRQLLEKYIQPLLEAGA 184
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV---FDDHA 249
D +VL CTHYP + + +L+ V +D ++AR+ + L + +
Sbjct: 185 DTLVLGCTHYPFVRPLIEELAGPEVAIIDTGAAVARQLKHRLQEADLLKDDSCKMPGVTE 244
Query: 250 LFLSGKPDIAMRRLMQGFG 268
+ + A +G
Sbjct: 245 FWSNADGLSAQSVTSLLWG 263
>gi|121610154|ref|YP_997961.1| glutamate racemase [Verminephrobacter eiseniae EF01-2]
gi|121554794|gb|ABM58943.1| glutamate racemase [Verminephrobacter eiseniae EF01-2]
Length = 301
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 71/274 (25%), Positives = 111/274 (40%), Gaps = 15/274 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL VL +R +P F+Y+AD PYG + R + + +
Sbjct: 19 QQPIGVFDSGVGGLSVLHALRAALPRERFVYLADSANAPYGERAAAQVSARTLAITGYLR 78
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+++ V+ACNTA DELR P + +G PA+K A A TQ+G + ++ T TL
Sbjct: 79 AQHRIKALVVACNTATAAAIDELRQRHPGLPLVGLEPALKPALALTQTGHVGVIGTRGTL 138
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI--KEDEIKKEIEGCFIEKE-- 188
L+ S + H L LA +E E +
Sbjct: 139 GSAKFGKLLASLADRAHFVLQPCDGLAHAIERSVLSTAPVSGSTETGALCQRYLHAMGTF 198
Query: 189 ---GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+ D +VL CTHY + R L V +++ +AR+ R LL + +
Sbjct: 199 GKAPGQIDTLVLGCTHYLFVTDELRALLGPGVQFVETGAPVARQTRRLLETAGLLRNGLR 258
Query: 246 D--------DHALFLSGKPDIAMRRLMQGFGLKS 271
+ L +G + + GL +
Sbjct: 259 EPQAAAETAGTRLLTTGPAAMLQAAAQRWLGLPA 292
>gi|320335009|ref|YP_004171720.1| glutamate racemase [Deinococcus maricopensis DSM 21211]
gi|319756298|gb|ADV68055.1| Glutamate racemase [Deinococcus maricopensis DSM 21211]
Length = 279
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 73/259 (28%), Positives = 112/259 (43%), Gaps = 10/259 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GGL VL +R +P ++Y+AD PYG D ++ + L
Sbjct: 11 PIGVFDSGVGGLSVLAALRRELPNEDYLYLADTAHVPYGPRADDDIRDLTGR-AARWLFD 69
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ V+ACNTA LR+ +G VPA+K A A T+SG+I +L+TPATLR
Sbjct: 70 HGAKSVVVACNTASAFSLAPLRAWAGDARPVVGLVPAVKPAVAATRSGVIGVLATPATLR 129
Query: 134 RTYTSNLIHSYVSQCHIHLVSS--MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+++ + + + +V + L VE E + G
Sbjct: 130 GALLQDVVAQHATPRGVRVVPCADLRLVPLVESGLA----DAPETLAALRETLDPVVGAG 185
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFDDHA 249
D +VL CTHYP + R L + D+ +ARR R +L + T
Sbjct: 186 ADALVLGCTHYPFLTSALRHLYGPDLALFDSGAGVARRTRAVLAERGLLRAPTGTPGTVR 245
Query: 250 LFLSGKPDIAMRRLMQGFG 268
F +G P + + + G
Sbjct: 246 AFTTGDPAASAGIIERLHG 264
>gi|110597807|ref|ZP_01386090.1| Glutamate racemase [Chlorobium ferrooxidans DSM 13031]
gi|110340532|gb|EAT59015.1| Glutamate racemase [Chlorobium ferrooxidans DSM 13031]
Length = 272
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 62/258 (24%), Positives = 105/258 (40%), Gaps = 7/258 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ I IFDSGIGGL V++ +R +P IY D PYG ++K + IL
Sbjct: 9 ESPIGIFDSGIGGLTVVKAIRAALPSERLIYFGDTARVPYGPKSQITIRKYAADDTA-IL 67
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+YQP L ++ACNT L D + + + +G + A + A T + I ++ T AT
Sbjct: 68 MRYQPKLIIVACNTVSALALDVVEKSCSGIPVIGVLKAGAELAVQVTGNNRIGVIGTQAT 127
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + I+ + + + + E I K E
Sbjct: 128 VCSNAYAREINLLNEESAVVSKACPLFVPLAE----EGFIDHPATKLIAGEYLAEIRKHD 183
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-AL 250
D +VL CTHYP++ V + + +D+++++A + + LL L
Sbjct: 184 IDTLVLGCTHYPILKRVIADIVGPGIRIIDSAEAVALKTKELLTESALLNAAATPSVPHL 243
Query: 251 FLSGKPDIAMRRLMQGFG 268
+S P + G
Sbjct: 244 LVSDLPQKFSQLYQLFMG 261
>gi|91782687|ref|YP_557893.1| glutamate racemase [Burkholderia xenovorans LB400]
gi|91686641|gb|ABE29841.1| glutamate racemase [Burkholderia xenovorans LB400]
Length = 295
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 66/258 (25%), Positives = 109/258 (42%), Gaps = 9/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ + IFDSG+GGL VL+ +R +P+ +YVAD + PYG +D + R + + + L
Sbjct: 20 RAPVGIFDSGLGGLSVLRAVRAQLPDEAILYVADSLYAPYGERDDDFIADRTLAI-GEWL 78
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA +R P + +G P IK AA +++ + +L+T TL
Sbjct: 79 VRQGAKALVVACNTATAQSIAMVREKLP-IPLVGVEPGIKPAALQSKTRVAGVLATQVTL 137
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R L+ Y + C L VE G E++ + G
Sbjct: 138 RSARFQALLERYAADCRFLCQPGHGLVQAVERCDVG----SAELRALLRGYLQPMLDAGA 193
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH---A 249
D +VL CTHYP + R++ + +D S +IAR+ +L +
Sbjct: 194 DTLVLGCTHYPFLDTAIREIVGDRLALIDTSVAIARQLERVLDQHGLRAAPESAGTALPR 253
Query: 250 LFLSGKPDIAMRRLMQGF 267
+ +G +
Sbjct: 254 FYSTGDGTHQQQLAATLL 271
>gi|254428102|ref|ZP_05041809.1| glutamate racemase [Alcanivorax sp. DG881]
gi|196194271|gb|EDX89230.1| glutamate racemase [Alcanivorax sp. DG881]
Length = 263
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 69/255 (27%), Positives = 123/255 (48%), Gaps = 7/255 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSGIGGL + +++R L+P + +YVAD + PYG +H +++R + + L +
Sbjct: 6 PIGIFDSGIGGLSIARRIRELLPNENLLYVADSIHAPYGEKSEHYIQQRSDAI-TRFLME 64
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ V+ACNTA +LR+ + ++ +G P IK AA ++SG+I +L+T TL+
Sbjct: 65 NEAKAIVVACNTATVSAIRQLRADY-TLPIIGVEPGIKPAALQSKSGVIGVLATSQTLKS 123
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+NL + + + L ++E + + + + K D
Sbjct: 124 ESFNNLSRLFSENVRVEIQPCPGLVEQIEALE----LDSEATQTLVARYVQPLIQKGADH 179
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALFLS 253
IVL CTHY + + R+ + V+ ++ ++AR L N + S
Sbjct: 180 IVLGCTHYAFLAPLIRRAAGAHVEVVNTDMAVARETVRRLQMHNLLSDSPQAGSATFWSS 239
Query: 254 GKPDIAMRRLMQGFG 268
+P +A R+L + +G
Sbjct: 240 AEPSLAHRQLSELWG 254
>gi|311281559|ref|YP_003943790.1| glutamate racemase [Enterobacter cloacae SCF1]
gi|308750754|gb|ADO50506.1| glutamate racemase [Enterobacter cloacae SCF1]
Length = 283
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 80/261 (30%), Positives = 139/261 (53%), Gaps = 6/261 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + +
Sbjct: 21 RPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSESFIVERVVEIVTAVQ 80
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+Y L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T T+
Sbjct: 81 ARYPLALAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGIVGLLATRGTV 139
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT LI + ++C I ++ S L E G + +E+++ + E
Sbjct: 140 KRPYTRELIDRFANECRIEMLGSAELVELAEAKLHGEPVPLEELRRILRPWLRMPEPP-- 197
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF- 251
D +VL CTH+PL+ + P +D+ +IARR LL + A
Sbjct: 198 DTVVLGCTHFPLLQEELLAVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCM 257
Query: 252 -LSGKPDIAMRRLMQGFGLKS 271
L+ + + +++ +G ++
Sbjct: 258 ALTAETEQLF-PVLRRYGFET 277
>gi|309803584|ref|ZP_07697676.1| glutamate racemase [Lactobacillus iners LactinV 11V1-d]
gi|309806029|ref|ZP_07700055.1| glutamate racemase [Lactobacillus iners LactinV 03V1-b]
gi|312872868|ref|ZP_07732930.1| glutamate racemase [Lactobacillus iners LEAF 2062A-h1]
gi|312873716|ref|ZP_07733761.1| glutamate racemase [Lactobacillus iners LEAF 2052A-d]
gi|325913753|ref|ZP_08176114.1| glutamate racemase [Lactobacillus iners UPII 60-B]
gi|308164332|gb|EFO66587.1| glutamate racemase [Lactobacillus iners LactinV 11V1-d]
gi|308167632|gb|EFO69785.1| glutamate racemase [Lactobacillus iners LactinV 03V1-b]
gi|311090714|gb|EFQ49113.1| glutamate racemase [Lactobacillus iners LEAF 2052A-d]
gi|311091602|gb|EFQ49984.1| glutamate racemase [Lactobacillus iners LEAF 2062A-h1]
gi|325476953|gb|EGC80104.1| glutamate racemase [Lactobacillus iners UPII 60-B]
Length = 261
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 55/255 (21%), Positives = 96/255 (37%), Gaps = 7/255 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I I DSG+GGL VL+K+ +P I++ D PYG+ + L
Sbjct: 3 NRPIGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIINLTRASV-KFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + CNTA ++ P A+ TQ+ +++++T AT+
Sbjct: 62 LTKNVKVIIFGCNTATAAAMSVIQQEIPMQIIGVIQSGALAASKITQTNQVAVIATNATV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I +Q + + LA VE + K + C + +
Sbjct: 122 NSHSYVKEIAFRNAQIQVTELGEPKLAPLVEAN-----PSDKIKKAVVAQCLAPLKHVQY 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYPL++ + +D +D +A+ +L R N H +
Sbjct: 177 DTLILGCTHYPLLIKEIAEFIGKDKKIVDPADQVAQYTFNVLKRDNLLA-EKGGKHEYYT 235
Query: 253 SGKPDIAMRRLMQGF 267
+G P M+ +
Sbjct: 236 TGDPIKFMKIAQKWM 250
>gi|319763448|ref|YP_004127385.1| glutamate racemase [Alicycliphilus denitrificans BC]
gi|330824305|ref|YP_004387608.1| glutamate racemase [Alicycliphilus denitrificans K601]
gi|317118009|gb|ADV00498.1| glutamate racemase [Alicycliphilus denitrificans BC]
gi|329309677|gb|AEB84092.1| glutamate racemase [Alicycliphilus denitrificans K601]
Length = 287
Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats.
Identities = 67/271 (24%), Positives = 117/271 (43%), Gaps = 13/271 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFSDIL 72
I +FDSGIGGL VLQ +R +P F+Y+AD PYG+ + +++R + + +
Sbjct: 8 RPIGVFDSGIGGLSVLQALRHELPHEDFVYLADSGNAPYGDAKGEAFVQQRTLAIARWLR 67
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ V+ACNTA + LR+T P + +G PA+K AAA +Q+ + +L+T T+
Sbjct: 68 AQHGIKALVVACNTATAAAVERLRATLPDLPAIGVEPALKPAAARSQTHHVGVLATRGTV 127
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED---EIKKEIEGCFIE--- 186
+ L + ++ + + LA +E+ + +I+
Sbjct: 128 SSARFARLHDEHGARTRFAVQACDGLARAIEQSTEEPLPATESATKIRALCARYTGALGR 187
Query: 187 --KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR- 243
+ D +VL CTHY R L V LD ++AR+ R +L +
Sbjct: 188 FGLKTGDIDTLVLGCTHYVFAKDALRDLVGPDVQILDTGAAVARQTRRILAQAGALAHER 247
Query: 244 ---VFDDHALFLSGKPDIAMRRLMQGFGLKS 271
L+ +G+ + L +
Sbjct: 248 PGAPPGGIRLYTTGQLGALQAAAGRWLQLPA 278
>gi|221198503|ref|ZP_03571549.1| glutamate racemase [Burkholderia multivorans CGD2M]
gi|221208547|ref|ZP_03581548.1| glutamate racemase [Burkholderia multivorans CGD2]
gi|221171538|gb|EEE03984.1| glutamate racemase [Burkholderia multivorans CGD2]
gi|221182435|gb|EEE14836.1| glutamate racemase [Burkholderia multivorans CGD2M]
Length = 292
Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats.
Identities = 71/259 (27%), Positives = 110/259 (42%), Gaps = 8/259 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL VL+ +R +P F+YVAD PYG +D + +R + + + L +
Sbjct: 22 PIGIFDSGLGGLSVLRAVRARLPGESFVYVADTRHAPYGERDDAFITERTLAI-GEWLVE 80
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ V+ACNTA +R ++ +G P IK A + SG++ +L+T ATLR
Sbjct: 81 QRAKALVVACNTATAQSIAAVRERL-AIPLVGVEPGIKPAVEQSASGVVGVLATQATLRS 139
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
L+ + + C L VE G ++ ++G D
Sbjct: 140 ARFQALLERHGAGCRFICQPGHGLVQAVERGDTG----SPALRALLDGYLKPMLDAGADT 195
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--ALFL 252
IVL CTHYP + R L + +D SD+IAR+ +L +
Sbjct: 196 IVLGCTHYPFLTTAIRGLIGERMTIVDTSDAIARQLARVLEQHGLRTPAGMPAAAPRFCS 255
Query: 253 SGKPDIAMRRLMQGFGLKS 271
+G L +
Sbjct: 256 TGDGRPLQALASTLLDLDA 274
>gi|330861644|emb|CBX71822.1| glutamate racemase [Yersinia enterocolitica W22703]
Length = 287
Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats.
Identities = 88/272 (32%), Positives = 143/272 (52%), Gaps = 11/272 (4%)
Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61
K D P + + LIFDSG+GGL V Q++R L+P+ H+IY D+V FPYG +
Sbjct: 19 KADTAP-----RPTALIFDSGVGGLSVYQEIRQLLPDLHYIYAFDNVAFPYGEKSGEFIV 73
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
+R++ + + + ++ + VIACNTA T+ LR F + +G VPAIK A T++G
Sbjct: 74 ERVLEIVTAVQQRHPLAIVVIACNTASTVSLPALRERF-TFPVVGVVPAIKPAVRLTRNG 132
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
++ +L+T T+ +YT +LI + + C I L+ S L E G + ++ +KK +
Sbjct: 133 VVGLLATRGTVHASYTQDLIERFATDCKIELLGSSELVELAETKLHGGVVPKEALKKILH 192
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+E D IVL CTH+PL+ Q+ P +D+ +IARR L+
Sbjct: 193 PWLAMREPP--DTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLISSQENMI 250
Query: 242 TRVFDDHALF--LSGKPDIAMRRLMQGFGLKS 271
+ ++ A L+ D + ++QG+G S
Sbjct: 251 SSDEENIAYCMALNADTDALL-PVLQGYGFPS 281
>gi|193213389|ref|YP_001999342.1| glutamate racemase [Chlorobaculum parvum NCIB 8327]
gi|229486233|sp|B3QQD9|MURI_CHLP8 RecName: Full=Glutamate racemase
gi|193086866|gb|ACF12142.1| glutamate racemase [Chlorobaculum parvum NCIB 8327]
Length = 272
Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats.
Identities = 67/257 (26%), Positives = 110/257 (42%), Gaps = 7/257 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I IFDSGIGGL VL+ ++ +P +Y D PYG ++K +++L
Sbjct: 10 SPIGIFDSGIGGLTVLKAVQAALPSERLLYFGDTARVPYGTKSQVTIRKYARED-TELLM 68
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATL 132
K+QP L ++ACNT L D + T + +G + A + AA T+SG I ++ T AT+
Sbjct: 69 KHQPKLIIVACNTVSALALDVVEQTAGDILVIGVLKAGAELAAHRTKSGRIGVIGTQATI 128
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
S I + + + E I + E GK
Sbjct: 129 GSNAYSCAIREENDALEVTPKACPLFVPLAE----EGFIDHPATRLVAEEYLSAFTGKEI 184
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-ALF 251
D +VL CTHYP++ V ++ + +D+++++A +A+ LL + L
Sbjct: 185 DTLVLGCTHYPILRKVIESIAGPQITIIDSAEAVASKAKELLSKHGLLNQSSATTLPHLM 244
Query: 252 LSGKPDIAMRRLMQGFG 268
+S P G
Sbjct: 245 VSDLPQKFRELYRLFMG 261
>gi|170017584|ref|YP_001728503.1| glutamate racemase [Leuconostoc citreum KM20]
gi|169804441|gb|ACA83059.1| Glutamate racemase [Leuconostoc citreum KM20]
Length = 289
Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats.
Identities = 52/260 (20%), Positives = 94/260 (36%), Gaps = 6/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
N I DSG+GGL V+++ + +P FI++ D PYG + + + +
Sbjct: 1 MNKNNPIGFVDSGVGGLTVIKEAQKQLPNEQFIFIGDTARMPYGPRPTEEVVRYTFQMAN 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
++++ L VIACNTA + +L+ T P A T++ I I++T
Sbjct: 61 YLVEQKHIKLLVIACNTATARVLSQLQRTLAIPVIGVIQPGAWAATKTTKNNRIGIIATQ 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ N IH++ I + VE E + + +
Sbjct: 121 GTVDSGAYDNEIHAFRDDVQITSQAEPEFVQLVESNKY----HEAATRNIVSQHLEHMKS 176
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDD 247
+ D ++L CTH+PL+ V +D R + L + + +
Sbjct: 177 QDVDTLILGCTHFPLLATFIEAAMGPQVTLIDAGRETVRVIQEALLMHDLYTSVAHSHSK 236
Query: 248 HALFLSGKPDIAMRRLMQGF 267
+ +G
Sbjct: 237 DIYYTTGNTANFRIIATDWL 256
>gi|88801356|ref|ZP_01116884.1| glutamate racemase [Polaribacter irgensii 23-P]
gi|88782014|gb|EAR13191.1| glutamate racemase [Polaribacter irgensii 23-P]
Length = 266
Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats.
Identities = 59/255 (23%), Positives = 113/255 (44%), Gaps = 8/255 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ I FDSGIGG V +++ L+P + IY++D PYG +
Sbjct: 3 SNNSPIGFFDSGIGGTSVWKEVIKLLPNENTIYLSDSENAPYGEKSADEIILLSRKNTDF 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+L + L ++ACNTA T LR + ++ F+G PAIK A+ T++ I +L+T
Sbjct: 63 LLKE-NCKLIIVACNTATTNAITFLRDAY-AIPFIGIEPAIKPASLITKTNKIGVLATQG 120
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TL + I + L + +E ++ +E + +
Sbjct: 121 TLNSALFEKTSLPIRNTIQIQETNGKGLVTLIE----NGQLNSEETRALLTVYLAPMLAN 176
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDH 248
D +VL CTHYP ++ R++ V +D+ +++A++ + +L + + + +H
Sbjct: 177 NIDSLVLGCTHYPYLIPQIREIIGPDVQIIDSGEAVAKQTKAILLKHKILNSDQKHTANH 236
Query: 249 ALFLSGKPDIAMRRL 263
L+++ + +
Sbjct: 237 KLYINKDKKALEKLI 251
>gi|259501297|ref|ZP_05744199.1| glutamate racemase [Lactobacillus iners DSM 13335]
gi|302190979|ref|ZP_07267233.1| glutamate racemase [Lactobacillus iners AB-1]
gi|312870760|ref|ZP_07730867.1| glutamate racemase [Lactobacillus iners LEAF 3008A-a]
gi|259167267|gb|EEW51762.1| glutamate racemase [Lactobacillus iners DSM 13335]
gi|311093772|gb|EFQ52109.1| glutamate racemase [Lactobacillus iners LEAF 3008A-a]
Length = 261
Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats.
Identities = 55/255 (21%), Positives = 97/255 (38%), Gaps = 7/255 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I I DSG+GGL VL+K+ +P I++ D PYG+ + L
Sbjct: 3 NRPIGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIINLTRASV-KFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + CNTA ++ P A+ TQ+ +++++T AT+
Sbjct: 62 LTKNVKVIIFGCNTATAAAMSVIQQEIPMQIIGVIQSGALAASKITQTNQVAVIATNATV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I +Q + + LA VE + K + C + +
Sbjct: 122 NSHSYVKEIAFRNAQIQVTELGEPKLAPLVEAN-----PSDKIKKAVVAQCLAPLKHVQY 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYPL++ + +D +D +A+ +L R N + H +
Sbjct: 177 DTLILGCTHYPLLIKEIAEFIGKDKKIVDPADQVAQYTFNVLKRDNLLAAKG-GKHEYYT 235
Query: 253 SGKPDIAMRRLMQGF 267
+G P M+ +
Sbjct: 236 TGDPIKFMKIAQKWM 250
>gi|315653048|ref|ZP_07905976.1| glutamate racemase [Lactobacillus iners ATCC 55195]
gi|315489583|gb|EFU79217.1| glutamate racemase [Lactobacillus iners ATCC 55195]
Length = 261
Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats.
Identities = 55/255 (21%), Positives = 96/255 (37%), Gaps = 7/255 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I I DSG+GGL VL+K+ +P I++ D PYG+ + L
Sbjct: 3 NRPIGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIINLTRASV-KFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + CNTA ++ P A+ TQ+ +++++T AT+
Sbjct: 62 LTKNVKVIIFGCNTATAAAMSVIQQEIPMQIIGVIQSGALAASKITQTNQVAVIATNATV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I +Q + + LA VE + K + C + +
Sbjct: 122 NSHSYVKEIAFRNAQIQVTELGEPKLAPLVEAN-----PSDKIKKAVVAQCLAPLKHVQY 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYPL++ + +D +D +A+ +L R N H +
Sbjct: 177 DTLILGCTHYPLLIKEIAEFIGKDKKIVDPADQVAQYTFNVLKRDNLL-GEKGGKHEYYT 235
Query: 253 SGKPDIAMRRLMQGF 267
+G P M+ +
Sbjct: 236 TGDPIKFMKIAQKWM 250
>gi|256821416|ref|YP_003145379.1| glutamate racemase [Kangiella koreensis DSM 16069]
gi|256794955|gb|ACV25611.1| glutamate racemase [Kangiella koreensis DSM 16069]
Length = 272
Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats.
Identities = 69/261 (26%), Positives = 114/261 (43%), Gaps = 12/261 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL +L+ +R +P + +YVAD PYG L KR + + +
Sbjct: 3 NAPIGVFDSGVGGLSILKSIREHLPNENLLYVADSAYAPYGRLPKDILHKRCTHIANFFV 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA ++ + LRS F + + PAIK AA T++G I + +T TL
Sbjct: 63 -EQGAKAMVIACNTATAVMAEWLRSEF-DIPIIAMEPAIKPAAHATRTGKIGVFATNHTL 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ L+ Y + + +VE + + + +E +
Sbjct: 121 KSDRYKKLLTEYAKDKKVFESACDGFVEQVET----GDLSSVKAFQLVEKYLQPMIDEHI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPV------DWLDNSDSIARRARCLLPRINTHQTRVFD 246
DV+VL CTHYP + + RQ+S V + +D+++ +L N +
Sbjct: 177 DVLVLGCTHYPFLAPLMRQISSQQVAGNQELQIIHTADAVSLHLTRVLAENNLLNFKDQQ 236
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ SG D + + Q
Sbjct: 237 FSRFYTSGDIDNSSKVFSQLL 257
>gi|295676105|ref|YP_003604629.1| glutamate racemase [Burkholderia sp. CCGE1002]
gi|295435948|gb|ADG15118.1| glutamate racemase [Burkholderia sp. CCGE1002]
Length = 295
Score = 226 bits (575), Expect = 3e-57, Method: Composition-based stats.
Identities = 66/260 (25%), Positives = 108/260 (41%), Gaps = 9/260 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL VL+ +R +P+ +YVAD + PYG +D + R + + + L
Sbjct: 22 PIGIFDSGLGGLSVLRAVRAQLPDEALLYVADSLYAPYGERDDDFITDRTLAI-GEWLAA 80
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA +R P + +G P +K AA ++S + +L+T ATLR
Sbjct: 81 RGAKALVVACNTATAQSIALVREKLP-IPLVGVEPGVKPAALQSKSRVAGVLATQATLRS 139
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
L+ Y + C L VE G E++ + D
Sbjct: 140 ARFQGLLERYAADCRFLCQPGHGLVQAVERCDVG----SAELRALLRSYLQPMLDAGADT 195
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH---ALF 251
+VL CTHYP + R + + +D S +IAR+ +L + +
Sbjct: 196 LVLGCTHYPFLDAAIRDIVGERLALIDTSVAIARQLERVLEQHGLRAATPAASTPLPRFY 255
Query: 252 LSGKPDIAMRRLMQGFGLKS 271
+ + +++
Sbjct: 256 STDDGIHQQQLAATLLQIEA 275
>gi|121605775|ref|YP_983104.1| glutamate racemase [Polaromonas naphthalenivorans CJ2]
gi|120594744|gb|ABM38183.1| glutamate racemase [Polaromonas naphthalenivorans CJ2]
Length = 272
Score = 226 bits (575), Expect = 4e-57, Method: Composition-based stats.
Identities = 79/268 (29%), Positives = 115/268 (42%), Gaps = 11/268 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +I +FDSGIGGL VL+ +R MP HFIY+AD PYG + + R +
Sbjct: 1 MDRAIGVFDSGIGGLSVLKALRAAMPHEHFIYIADSGHAPYGERDVAHVLARSRAIV-QY 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L V+ACNTA LR+ P +A +G PA+K AA TQ+G I +++T +T
Sbjct: 60 LVNQNVKALVMACNTATAAAIHLLRTEHPGLALIGVEPALKPAAGRTQTGRIGVMATRST 119
Query: 132 LRRTYTSNLIHSYVSQCH---IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK- 187
L L+ + + LA +E A
Sbjct: 120 LASAKFQALLAAQSGGPQKVEFIVQPCDGLAHAIE--ASADTGDATRTIALCAHYISAMG 177
Query: 188 ----EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
E + D +VL CTHYP R L V ++DN +++AR+ LLP
Sbjct: 178 RFGTETGQIDTLVLGCTHYPFASEHLRALVGAQVQFIDNGEAVARQTLRLLPASVMAANA 237
Query: 244 VFDDHALFLSGKPDIAMRRLMQGFGLKS 271
+LF +G+PD + GL +
Sbjct: 238 PPGRVSLFTTGQPDTLQAAAQRWLGLSA 265
>gi|260556259|ref|ZP_05828478.1| glutamate racemase [Acinetobacter baumannii ATCC 19606]
gi|260410314|gb|EEX03613.1| glutamate racemase [Acinetobacter baumannii ATCC 19606]
Length = 288
Score = 226 bits (575), Expect = 4e-57, Method: Composition-based stats.
Identities = 63/259 (24%), Positives = 118/259 (45%), Gaps = 11/259 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSGIGG+ V ++ +P +Y AD PYG D +++ L
Sbjct: 20 DAPIGIFDSGIGGMSVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRELTARAVD-WL 78
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ ++V+ACNTA D LR + +G VPA+K A T+S ++++L+TPAT
Sbjct: 79 YRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVAVLATPAT 138
Query: 132 LRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
R +++ + + + ++S+ L VE + + +++ ++
Sbjct: 139 FRGQLIKDVVEKFAVPAGVKVMTLTSLELVPCVEAGQQMSPVCLNALREVLQ----PAVE 194
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH- 248
+ D +VL CTHYP + L +D+ ++AR+ +L + + +
Sbjct: 195 QGADYLVLGCTHYPFLNEAIHHLFDNQFTLVDSGLAVARQTARILIKNELLCDQTRQNVA 254
Query: 249 --ALFLSGKPDIAMRRLMQ 265
++SG A++ ++Q
Sbjct: 255 RIECYVSGNNADALQPVLQ 273
>gi|238561735|ref|ZP_00441552.2| glutamate racemase [Burkholderia mallei GB8 horse 4]
gi|254203335|ref|ZP_04909696.1| glutamate racemase [Burkholderia mallei FMH]
gi|254205214|ref|ZP_04911567.1| glutamate racemase [Burkholderia mallei JHU]
gi|147745574|gb|EDK52653.1| glutamate racemase [Burkholderia mallei FMH]
gi|147754800|gb|EDK61864.1| glutamate racemase [Burkholderia mallei JHU]
gi|238523998|gb|EEP87433.1| glutamate racemase [Burkholderia mallei GB8 horse 4]
Length = 302
Score = 226 bits (575), Expect = 4e-57, Method: Composition-based stats.
Identities = 66/276 (23%), Positives = 110/276 (39%), Gaps = 11/276 (3%)
Query: 1 MKIDNYPCEK--KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58
M P + + I +FDSG+GGL VL+ +R + + +YVAD PYG +D
Sbjct: 13 MTTPYAPDSRAPSARAPIGVFDSGLGGLSVLRAVRERLLDEALVYVADSRHAPYGPRDDV 72
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ +R + + + L V+ACNTA +R P + +G P IK AA ++
Sbjct: 73 FIVERTLAI-GEWLVAQGAKALVVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHS 130
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
++ + +L+T ATLR L+ + + C L +E G ++
Sbjct: 131 KTRVAGVLATQATLRSARFEALLARHAADCRFLCQPGHGLVEAIERGDTG----SPALRA 186
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+ D +VL CTHYP + R ++ + +D D+IAR+ +L
Sbjct: 187 LLASYLEPMLEAGADTLVLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIARQLARVLDERG 246
Query: 239 THQ---TRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
R + GL +
Sbjct: 247 LRAPASPRPAPLPRFCSTSDGRQLQALAATLLGLDA 282
>gi|310766063|gb|ADP11013.1| glutamate racemase [Erwinia sp. Ejp617]
Length = 283
Score = 226 bits (575), Expect = 4e-57, Method: Composition-based stats.
Identities = 86/261 (32%), Positives = 144/261 (55%), Gaps = 6/261 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L+ ++LIFDSG+GGL V ++R L+P+ H++Y D+V FPYG + + +R++ + + +
Sbjct: 20 LRPTVLIFDSGVGGLSVYNEIRALLPDLHYLYAFDNVAFPYGEKSEEFIVERVVAIVTAV 79
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
Y L VIACN+A T+ LR+ F + +G VPAIK AA T++G++ +L+T T
Sbjct: 80 TRLYPLALVVIACNSASTVTLPALRARF-AFPVVGVVPAIKPAARLTRNGIVGLLATRGT 138
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT LI + +C ++ S L E G + +E+++ ++ E
Sbjct: 139 VKRPYTHELIARFAGECKTEMLGSGELVEIAEAKLHGQPVALEEVRRILQPWLRMPEPP- 197
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTH+PLI +Q+ P +D+ +IARR LL + D+ AL
Sbjct: 198 -DTVVLGCTHFPLISEELQQVLPEGTRLIDSGAAIARRTVWLLENESPEALSADDNMALC 256
Query: 252 LSGKPDIA--MRRLMQGFGLK 270
+ G + A + ++Q +G K
Sbjct: 257 M-GITEQAVQLIPVLQRYGFK 276
>gi|309809660|ref|ZP_07703516.1| glutamate racemase [Lactobacillus iners SPIN 2503V10-D]
gi|308170020|gb|EFO72057.1| glutamate racemase [Lactobacillus iners SPIN 2503V10-D]
Length = 261
Score = 226 bits (575), Expect = 4e-57, Method: Composition-based stats.
Identities = 55/255 (21%), Positives = 96/255 (37%), Gaps = 7/255 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I I DSG+GGL VL+K+ +P I++ D PYG+ + L
Sbjct: 3 NRPIGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIINLTRASV-KFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + CNTA ++ P A+ TQ+ +++++T AT+
Sbjct: 62 LTKNVKVIIFGCNTATAAAMSVIQQEIPMQIIGVIQSGALAASKITQTNQVAVIATNATV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I +Q + + LA VE + K + C + +
Sbjct: 122 NSHSYVKEIAFRNAQIQVTELGEPKLAPLVEAN-----PSDKIKKVVVAQCLAPLKHVQY 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYPL++ + +D +D +A+ +L R N H +
Sbjct: 177 DTLILGCTHYPLLIKEIAEFIGKDKKIVDPADQVAQYTFNVLKRDNLLA-EKGGKHEYYT 235
Query: 253 SGKPDIAMRRLMQGF 267
+G P M+ +
Sbjct: 236 TGDPIKFMKIAQKWM 250
>gi|227890834|ref|ZP_04008639.1| glutamate racemase [Lactobacillus salivarius ATCC 11741]
gi|227867243|gb|EEJ74664.1| glutamate racemase [Lactobacillus salivarius ATCC 11741]
Length = 256
Score = 226 bits (575), Expect = 4e-57, Method: Composition-based stats.
Identities = 64/257 (24%), Positives = 115/257 (44%), Gaps = 7/257 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K I +FDSG+GG+ VL+++ +MP +I+ D PYG ++K
Sbjct: 4 KKDAPIGVFDSGMGGISVLRELVKIMPNEDYIFFGDSANAPYGIKTVEEVQKLSFEKVE- 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L Y V+ACNTA + ELR+ +P + +G PA+K A + + + +++TP
Sbjct: 63 HLLSYNCKAIVVACNTATSAAIKELRAAYPDLIIVGLEPALKPAVEHKKDSKVGVMATPL 122
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TL+ ++L++ YV++ I + + L +E + E++ ++ +
Sbjct: 123 TLKEKKFNDLMNKYVTKADIRKIPAPDLVEFIE----SGDVDSPELETYLQKLLSPYKDS 178
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D IVL CTH+P V +++ +D + AR + LL + N +
Sbjct: 179 --DSIVLGCTHFPFAKKVIQKIMGDDTFIVDGGEGAARETKHLLEKSNLLSDKTEKGSVK 236
Query: 251 FLSGKPDIAMRRLMQGF 267
F + + L Q
Sbjct: 237 FENSRNTKGELELSQKL 253
>gi|227510206|ref|ZP_03940255.1| glutamate racemase [Lactobacillus brevis subsp. gravesensis ATCC
27305]
gi|227190411|gb|EEI70478.1| glutamate racemase [Lactobacillus brevis subsp. gravesensis ATCC
27305]
Length = 264
Score = 226 bits (575), Expect = 4e-57, Method: Composition-based stats.
Identities = 55/252 (21%), Positives = 101/252 (40%), Gaps = 7/252 (2%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL VL+++ ++P +I+V D PYG ++K + +L K
Sbjct: 1 MDSGVGGLTVLREIVKILPNESYIFVGDQANLPYGQKSPETVRKLTKRIADYML-KQNVK 59
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138
+ VIACNT+ D L+ P P + A A T + I +++T T+
Sbjct: 60 MFVIACNTSTAASLDYLKKILPIPVIGVIAPGAESAVAATNNNKIGVIATNGTVNSGVYQ 119
Query: 139 NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198
+I S + ++ + + VE G + ++++ K D +VL
Sbjct: 120 RIIKSLDPKSDVYSLGCPDFVTMVEHGDAG----SELAREKVSHQLAYFHDKPIDTLVLG 175
Query: 199 CTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA--LFLSGKP 256
CTH+P++ + ++ +D S A+ L + + F +G
Sbjct: 176 CTHFPVLETEIKDAVNSGINLIDPGISTAKNVADYLRSHHQMRDSSQSPQIKSFFTTGNQ 235
Query: 257 DIAMRRLMQGFG 268
+ + Q G
Sbjct: 236 NEFTKIADQLLG 247
>gi|167588983|ref|ZP_02381371.1| glutamate racemase [Burkholderia ubonensis Bu]
Length = 285
Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats.
Identities = 67/258 (25%), Positives = 106/258 (41%), Gaps = 7/258 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ +FDSG+GGL VL+ +R +P F+YVAD PYG ++ + +R + + + L +
Sbjct: 16 PVGVFDSGLGGLSVLRAVRAQLPGESFVYVADSRNAPYGPRDEAFITERTLAI-GEWLAR 74
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA +R ++ +G P IK AAA + SG+ +L+T +TL
Sbjct: 75 EGAKALVVACNTATAQSIAAIRERL-AIPLVGVEPGIKPAAALSASGIAGVLATQSTLAS 133
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
L+ Y + C L VE ++ ++G D
Sbjct: 134 ARFQALLDRYGAGCRFICQPGHGLVEAVERGDTN----SPALRALLDGYLQPMLDAGADT 189
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALFLS 253
+VL CTHYP R L + +D SD+IAR+ +L +
Sbjct: 190 LVLGCTHYPFFTETIRDLFGDRLTIVDTSDAIARQLARVLDERGLRAPAGTRAPPRFCST 249
Query: 254 GKPDIAMRRLMQGFGLKS 271
GL +
Sbjct: 250 SDGRQLRALASTLLGLDA 267
>gi|237747808|ref|ZP_04578288.1| glutamate racemase [Oxalobacter formigenes OXCC13]
gi|229379170|gb|EEO29261.1| glutamate racemase [Oxalobacter formigenes OXCC13]
Length = 283
Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats.
Identities = 71/265 (26%), Positives = 122/265 (46%), Gaps = 13/265 (4%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K I IFDSG+GGL VL+ + +P+ +Y AD PYG+ + + +R FL +D
Sbjct: 13 KASGPIGIFDSGVGGLSVLRHIATQLPDEELVYFADSGYAPYGDKPEEFVVERS-FLITD 71
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L K V+ACNTA + LR +P + +G P +K AAA T +G + +++T
Sbjct: 72 FLLKQDIKALVVACNTATAMAIHLLREKYPDLPIVGVEPGLKPAAAKTITGTVGVMATER 131
Query: 131 TLRRTYTSNLIHSYVSQCHIH--LVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
TL L Q +H + + +A +E + + I + ++ +
Sbjct: 132 TLASNKFHVLHQLLNDQTGVHFIMQACNGMADLIEHAE----LDSEPIFELVQRYLLPLL 187
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPW----PVDWLDNSDSIARRARCLLPRINTHQTRV 244
++ D IVL CTHYP + HV +++ ++ +D ++AR+ + LL ++
Sbjct: 188 EQKADTIVLGCTHYPFVRHVIEKVAADYGSTQLNIIDTGYAVARQLKHLLDIYGLNKNGC 247
Query: 245 FDD--HALFLSGKPDIAMRRLMQGF 267
D + SG P + +
Sbjct: 248 SPDSLVRAYTSGDPATISHLISRLL 272
>gi|225375887|ref|ZP_03753108.1| hypothetical protein ROSEINA2194_01523 [Roseburia inulinivorans DSM
16841]
gi|225212322|gb|EEG94676.1| hypothetical protein ROSEINA2194_01523 [Roseburia inulinivorans DSM
16841]
Length = 290
Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats.
Identities = 62/259 (23%), Positives = 107/259 (41%), Gaps = 7/259 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
++Q I +FDSG+GG+ VL+++ LMP +FI+ D PYG ++K +
Sbjct: 32 EMQRPIGVFDSGVGGISVLRELVALMPNENFIFYGDSKNAPYGTKTLEEVRKLTLADAE- 90
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRS-TFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L V+ACNTA + LR + +G PA+K A + ++ + +++TP
Sbjct: 91 YLRSRNVKALVVACNTATSAAIHILREKYQKEIPVIGIEPALKPAVSVKENSRVLVMATP 150
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
TLR NL+ + Q I + L VE + ++ ++ F +
Sbjct: 151 MTLREKKFHNLMQKFQDQAEIISLPCPGLVEFVERGELSG----EALEHFLKNLFAPYQE 206
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDH 248
++ D +VL CTHYPL+ +++ V D AR L +
Sbjct: 207 RKVDAVVLGCTHYPLVRKTIQKVLGSGVAVFDGGAGTARETLHKLKEYSLVSDAVTPGTV 266
Query: 249 ALFLSGKPDIAMRRLMQGF 267
+ S + +
Sbjct: 267 QFYNSTEDQAMIELSKYLL 285
>gi|310778213|ref|YP_003966546.1| glutamate racemase [Ilyobacter polytropus DSM 2926]
gi|309747536|gb|ADO82198.1| glutamate racemase [Ilyobacter polytropus DSM 2926]
Length = 270
Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats.
Identities = 50/259 (19%), Positives = 98/259 (37%), Gaps = 7/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG GGL V+++++ ++P Y D PYG+ + + + L
Sbjct: 3 NRGIGVFDSGFGGLTVVKEIKKVLPGEKIYYFGDTARLPYGSKSKENIIHYSLEIAE-FL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
V+ACNTA DEL+ ++A T++G + I+ T T+
Sbjct: 62 KTKDIKALVVACNTASAFALDELKKHCSFPVIGVIEAGSRRALGITKNGKVGIIGTKGTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ ++ + VE ++++ + I+ E + K
Sbjct: 122 SSGVYDRSLSKGRKGIEVYSKPCPLFVPLVE----EGMVQDEVTEIMIDRYLREFKNK-V 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPW-PVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +++ CTHYPL+ ++ ++ ++ + A LL + + +
Sbjct: 177 DSLIMGCTHYPLLEDEIKRYFEKYELEVVNPAVETALELEKLLAEKAILSKKSNGEIEFY 236
Query: 252 LSGKPDIAMRRLMQGFGLK 270
+S P+ G K
Sbjct: 237 VSDSPNHFKELGEMFLGEK 255
>gi|296162473|ref|ZP_06845264.1| glutamate racemase [Burkholderia sp. Ch1-1]
gi|295887286|gb|EFG67113.1| glutamate racemase [Burkholderia sp. Ch1-1]
Length = 284
Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats.
Identities = 67/258 (25%), Positives = 107/258 (41%), Gaps = 9/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ + IFDSG+GGL VL+ +R +P+ +YVAD + PYG +D + R + + + L
Sbjct: 9 RAPVGIFDSGLGGLSVLRAVRAQLPDEAILYVADSLYAPYGERDDDFIADRTLAI-GEWL 67
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K V+ACNTA +R P + +G P IK AA +++ + +L+T TL
Sbjct: 68 VKQGAKALVVACNTATAQSIAMVREKLP-IPLVGVEPGIKPAALQSKTRVAGVLATQVTL 126
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R L+ Y + C L VE I E+ + G
Sbjct: 127 RSARFQALLERYAADCRFLCQPGHGLVQAVERC----DISSAELHALLRGYLQPMLDAGA 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH---A 249
D +VL CTHYP + R + + +D S +IAR+ +L +
Sbjct: 183 DTLVLGCTHYPFLDTAIRDIVGDRLVLIDTSVAIARQLERVLDQHGLRAAPESGGTALPR 242
Query: 250 LFLSGKPDIAMRRLMQGF 267
+ +G +
Sbjct: 243 FYSTGDGTHQQQLAATLL 260
>gi|123440538|ref|YP_001004532.1| glutamate racemase [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|166231066|sp|A1JI42|MURI_YERE8 RecName: Full=Glutamate racemase
gi|122087499|emb|CAL10280.1| putative glutamate racemase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 287
Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats.
Identities = 88/272 (32%), Positives = 143/272 (52%), Gaps = 11/272 (4%)
Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61
K D P + + LIFDSG+GGL V Q++R L+P+ H+IY D+V FPYG +
Sbjct: 19 KADTAP-----RPTALIFDSGVGGLSVYQEIRQLLPDLHYIYAFDNVAFPYGEKSGEFIV 73
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
+R++ + + + ++ + VIACNTA T+ LR F + +G VPAIK A T++G
Sbjct: 74 ERVLEIVTAVQQRHPLAIVVIACNTASTVSLPALRERF-TFPVVGVVPAIKPAVRLTRNG 132
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
++ +L+T T+ +YT +LI + + C I L+ S L E G + ++ +KK +
Sbjct: 133 VVGLLATRGTVHASYTQDLIERFATDCKIELLGSSELVELAETKLHGGVVPKEALKKILH 192
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+E D IVL CTH+PL+ Q+ P +D+ +IARR L+
Sbjct: 193 PWLAMREPP--DTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLISSQENVI 250
Query: 242 TRVFDDHALF--LSGKPDIAMRRLMQGFGLKS 271
+ ++ A L+ D + ++QG+G S
Sbjct: 251 SSDEENIAYCMALNADTDALL-PVLQGYGFPS 281
>gi|169794284|ref|YP_001712077.1| putative glutamate racemase [Acinetobacter baumannii AYE]
gi|215481842|ref|YP_002324024.1| glutamate racemase [Acinetobacter baumannii AB307-0294]
gi|301347985|ref|ZP_07228726.1| glutamate racemase [Acinetobacter baumannii AB056]
gi|301512532|ref|ZP_07237769.1| glutamate racemase [Acinetobacter baumannii AB058]
gi|332850363|ref|ZP_08432697.1| glutamate racemase [Acinetobacter baumannii 6013150]
gi|332871530|ref|ZP_08440024.1| glutamate racemase [Acinetobacter baumannii 6013113]
gi|169147211|emb|CAM85070.1| putative glutamate racemase [Acinetobacter baumannii AYE]
gi|213986873|gb|ACJ57172.1| glutamate racemase [Acinetobacter baumannii AB307-0294]
gi|332730821|gb|EGJ62131.1| glutamate racemase [Acinetobacter baumannii 6013150]
gi|332731384|gb|EGJ62676.1| glutamate racemase [Acinetobacter baumannii 6013113]
Length = 266
Score = 225 bits (574), Expect = 5e-57, Method: Composition-based stats.
Identities = 65/259 (25%), Positives = 121/259 (46%), Gaps = 6/259 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
N I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+
Sbjct: 3 NNNNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLISN 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ + + V+ACNT + + +R+ S+ + PA+K A A TQS I++L+T
Sbjct: 63 LVTQGKCKAIVVACNTMTAVAIETIRAQI-SVPLIAIEPAVKPAVAITQSKHIAVLATAT 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ +LI +Y + LV + LA ++E E+K +E +
Sbjct: 122 TVKGKNLKSLIETYAQDIKVSLVPCIGLAEKIETGKA----YTAEVKDYLENILAPLVEQ 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHA 249
+ D I+L CTHYP + +++ + ++ S+++ + L + + + ++ +H
Sbjct: 178 KVDTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLNSESPNEGNHI 237
Query: 250 LFLSGKPDIAMRRLMQGFG 268
++ S P G
Sbjct: 238 IWTSSDPLEVADITFSLLG 256
>gi|89901373|ref|YP_523844.1| glutamate racemase [Rhodoferax ferrireducens T118]
gi|89346110|gb|ABD70313.1| glutamate racemase [Rhodoferax ferrireducens T118]
Length = 271
Score = 225 bits (574), Expect = 5e-57, Method: Composition-based stats.
Identities = 74/257 (28%), Positives = 110/257 (42%), Gaps = 3/257 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSGIGGL +L+ +R +P F+Y+AD PYG ++ + R + + +L
Sbjct: 9 KRPIGVFDSGIGGLSILKALRAELPREDFVYMADSGHAPYGERDEAHVIARSSAITTHLL 68
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+Y V+ACNTA LR P + +G PA+K A A +++ I +++T +TL
Sbjct: 69 AQYDIQALVVACNTATAAAISTLRQAHPLLPIIGLEPALKPALALSKTRRIGVMATRSTL 128
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
L+ S Q LA +E I G F
Sbjct: 129 GSAKFGTLVASLAGQAEFMCQPCDGLADAIERQDTTKTIALCAYYTGAIGRFG-INEGEI 187
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTHYP RQL V +D +++AR+ R LLP + L
Sbjct: 188 DTLVLGCTHYPFASDTLRQLLGSSVQLIDTGEAVARQTRRLLP--SPSSADTPGACRLLS 245
Query: 253 SGKPDIAMRRLMQGFGL 269
+G P GL
Sbjct: 246 TGDPSTLRHAAHHWLGL 262
>gi|260549201|ref|ZP_05823422.1| glutamate racemase [Acinetobacter sp. RUH2624]
gi|260407929|gb|EEX01401.1| glutamate racemase [Acinetobacter sp. RUH2624]
Length = 288
Score = 225 bits (574), Expect = 5e-57, Method: Composition-based stats.
Identities = 64/259 (24%), Positives = 120/259 (46%), Gaps = 11/259 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSGIGG+ V ++ +P H +Y AD PYG D +++ L
Sbjct: 20 DAPIGIFDSGIGGMSVAAEIARYLPNEHIVYYADTAYVPYGPRSDEEIRELTARAVD-WL 78
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ ++V+ACNTA D LR + +G VPA+K A T+S ++++L+TPAT
Sbjct: 79 YRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVAVLATPAT 138
Query: 132 LRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
R +++ + + + ++++ L VE + + +K+ ++
Sbjct: 139 FRGQLIKDVVEKFAVPAGVKVMTLTNLELVPCVEAGQQMSPVCLNALKEVLQ----PAAD 194
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH- 248
+ D +VL CTHYP + L +D+ ++AR+ +L + ++ +
Sbjct: 195 QGADYLVLGCTHYPFLNEAIHHLFDNQFTLVDSGLAVARQTARILIKNELLCDQIRQNVA 254
Query: 249 --ALFLSGKPDIAMRRLMQ 265
++SG A++ ++Q
Sbjct: 255 RIECYVSGNNAEALQPVLQ 273
>gi|116617725|ref|YP_818096.1| glutamate racemase [Leuconostoc mesenteroides subsp. mesenteroides
ATCC 8293]
gi|116096572|gb|ABJ61723.1| glutamate racemase [Leuconostoc mesenteroides subsp. mesenteroides
ATCC 8293]
Length = 291
Score = 225 bits (574), Expect = 5e-57, Method: Composition-based stats.
Identities = 51/257 (19%), Positives = 97/257 (37%), Gaps = 6/257 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
N I + DSGIGGL V+++ + +P IY+ D PYG + + + ++
Sbjct: 17 NNPIGLVDSGIGGLTVVKESQKQLPNEQLIYIGDTARMPYGPRSEKEVIDYTFQMAHYLV 76
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + VIACNTA +LR P + A + +Q+ I +++T T+
Sbjct: 77 NEQNIKMLVIACNTATARALSQLREQLCIPVIGVIQPGAEAAVSISQNKKIGLIATQGTV 136
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + + I + + VE + DE ++ I +
Sbjct: 137 ESQVYNEKMLAIDNNVQITSQAEPEFVTLVENNLY----QSDEAREVIAHHLSAFKEANI 192
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHAL 250
D ++L CTH+PL+ ++ V +D+ + L ++ H D
Sbjct: 193 DTLILGCTHFPLLTPFIQEAVGSDVTLVDSGAKTVAVMKQYLDELDIHSEVKHNHSDDIY 252
Query: 251 FLSGKPDIAMRRLMQGF 267
+G
Sbjct: 253 NTTGDKLKFKTIASSWL 269
>gi|269122263|ref|YP_003310440.1| glutamate racemase [Sebaldella termitidis ATCC 33386]
gi|268616141|gb|ACZ10509.1| glutamate racemase [Sebaldella termitidis ATCC 33386]
Length = 258
Score = 225 bits (574), Expect = 5e-57, Method: Composition-based stats.
Identities = 58/252 (23%), Positives = 102/252 (40%), Gaps = 8/252 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL VL+++R + P Y D PYG + + + +L K
Sbjct: 3 IGIFDSGLGGLTVLKEVRKIFPNEEIFYFGDTARVPYGEKTKELIIRYSKEITDFLLTK- 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA L +EL++ + ++ A + T++ I ++ T AT+
Sbjct: 62 NINVLVVACNTATALALEELKAVYDIPVIGVIEAGVRSALSVTKTNEIGVIGTKATINSE 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
IH ++ + + VEE +I E IK + + D +
Sbjct: 122 KYKQEIHRRNKDIVVYQKACPLFVHVVEEGLLDGEIIESIIKHYLGDF-----DDKVDTL 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYPL+ +++ P ++ +D + A + +L N ++S
Sbjct: 177 ILGCTHYPLLKKEIQKIYP-DLNLIDPAMETALDLKKVLTENN-AAENKGGHVKFYVSDG 234
Query: 256 PDIAMRRLMQGF 267
Sbjct: 235 VQNFRNIGSMFL 246
>gi|167760730|ref|ZP_02432857.1| hypothetical protein CLOSCI_03115 [Clostridium scindens ATCC 35704]
gi|167661617|gb|EDS05747.1| hypothetical protein CLOSCI_03115 [Clostridium scindens ATCC 35704]
Length = 281
Score = 225 bits (574), Expect = 5e-57, Method: Composition-based stats.
Identities = 53/256 (20%), Positives = 102/256 (39%), Gaps = 6/256 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
++ + +FDSG+GGL V +++ +P + +Y D PYG+ + + +
Sbjct: 12 NRENTAPVGVFDSGVGGLTVAREIMRQLPMENVVYFGDTARVPYGSKSRDNIIRFSRQII 71
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
L+ VIACNTA L D ++ P + A T++G I ++ T
Sbjct: 72 -RFLETKNVKAIVIACNTASALALDTVQKETDVPVIGVIGPGARAAVKETRNGQIGVVGT 130
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + +IHS + + + VEE KI E+ I+ + +
Sbjct: 131 EATIQSETYTKVIHSLNPEASVIGKPCPLFVPLVEEGFAKHKITEEA----IDFYLSDMK 186
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDD 247
+ D ++L CTHYPL+ + ++ + A + L + +
Sbjct: 187 STQIDTMILGCTHYPLLRSKIMAYFGEEIHIVNPAYETAMDLKAALNDCGIANQSGIPAT 246
Query: 248 HALFLSGKPDIAMRRL 263
+ ++S +
Sbjct: 247 YEFYVSDAAQKFTKFA 262
>gi|117918638|ref|YP_867830.1| glutamate racemase [Shewanella sp. ANA-3]
gi|166231054|sp|A0KRK5|MURI_SHESA RecName: Full=Glutamate racemase
gi|117610970|gb|ABK46424.1| glutamate racemase [Shewanella sp. ANA-3]
Length = 273
Score = 225 bits (574), Expect = 5e-57, Method: Composition-based stats.
Identities = 79/267 (29%), Positives = 132/267 (49%), Gaps = 12/267 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL ++R L+P + + Y+ D+ PYG E+ L + L +
Sbjct: 1 MSQPILVFDSGIGGLSVLAEIRKLLPHHDYCYLFDNARLPYGELEEQELISGCVALIDQV 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+++ + V+ACNTA T++ LR+T S+ +G VPAIK AA ++S I +L+TP T
Sbjct: 61 VERTHAAIVVVACNTASTVVLPALRATL-SIPVVGVVPAIKPAAQLSKSKRIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT LI + CH+ L S L E+ ++ +
Sbjct: 120 VKRHYTYELISQFADDCHVELFGSSELVLMAEQKIATGQLD----MVRLTQVLSPIVEAD 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD---- 247
DV+VL CTH+P++ +Q+ V LD+ ++IA+R + LL + + +D
Sbjct: 176 LDVLVLGCTHFPMLRDELQQVLGQGVTLLDSGEAIAKRVKTLLAETKSDEQVQEEDAHSN 235
Query: 248 ---HALFLSGKPDIAMRRLMQGFGLKS 271
A + + + + G +
Sbjct: 236 LLMQAFYTKAEISEGLATTLVDCGFST 262
>gi|325911946|ref|ZP_08174349.1| glutamate racemase [Lactobacillus iners UPII 143-D]
gi|325476248|gb|EGC79411.1| glutamate racemase [Lactobacillus iners UPII 143-D]
Length = 261
Score = 225 bits (574), Expect = 5e-57, Method: Composition-based stats.
Identities = 55/255 (21%), Positives = 97/255 (38%), Gaps = 7/255 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I I DSG+GGL VL+K+ +P I++ D PYG+ + L
Sbjct: 3 NRPIGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIINLTRASV-KFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + CNTA ++ P A+ TQ+ +++++T AT+
Sbjct: 62 LTKNVKVIIFGCNTATAAAMSVIQQEIPMQIIGVIQSGALAASKITQTNQVAVIATNATV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I +Q + + LA VE + K + C + +
Sbjct: 122 NSHSYVKEIAFRNAQIQVTELGEPKLAPLVEAN-----PSDKIKKAVVVQCLAPLKHVQY 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYPL++ + +D +D +A+ +L R N + H +
Sbjct: 177 DTLILGCTHYPLLIKEIAEFIGKDKKIVDPADQVAQYTFNVLKRDNLLAAKG-GKHEYYT 235
Query: 253 SGKPDIAMRRLMQGF 267
+G P M+ +
Sbjct: 236 TGDPIKFMKIAQKWM 250
>gi|86140719|ref|ZP_01059278.1| glutamate racemase [Leeuwenhoekiella blandensis MED217]
gi|85832661|gb|EAQ51110.1| glutamate racemase [Leeuwenhoekiella blandensis MED217]
Length = 263
Score = 225 bits (574), Expect = 5e-57, Method: Composition-based stats.
Identities = 62/257 (24%), Positives = 117/257 (45%), Gaps = 7/257 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ + I +FDSG+GG + +++ +P IY+AD PYG + + +
Sbjct: 1 MQNKRPIGVFDSGVGGTSIWKEIVAKLPYEDSIYLADIKNAPYGERSKEEIIALSVKN-T 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L + V+ACNTA T D LR+ + + F+G PAIK AA +++ I IL+T
Sbjct: 60 EYLIDQGCKIIVVACNTATTNAIDVLRANY-DIPFIGIEPAIKPAALASKTKAIGILATK 118
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
TL + Y S+ ++ V L +E K+ +++ ++
Sbjct: 119 GTLSSALFARTSSLYTSELNVVEVIGKGLVELIE----AGKLHTEKLFNLLKSYIEPMLA 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDH 248
+ D +VL C+HYP ++ V +++ P + +D+ ++A++ +L F H
Sbjct: 175 QNIDYLVLGCSHYPYLIPVLKKILPEHIQIIDSGQAVAKQTERVLGANQLLSQVDQFGKH 234
Query: 249 ALFLSGKPDIAMRRLMQ 265
L+ + +I +
Sbjct: 235 KLYSNASIEILEALTKE 251
>gi|114561314|ref|YP_748827.1| glutamate racemase [Shewanella frigidimarina NCIMB 400]
gi|122301132|sp|Q089S6|MURI_SHEFN RecName: Full=Glutamate racemase
gi|114332607|gb|ABI69989.1| glutamate racemase [Shewanella frigidimarina NCIMB 400]
Length = 259
Score = 225 bits (574), Expect = 5e-57, Method: Composition-based stats.
Identities = 74/259 (28%), Positives = 125/259 (48%), Gaps = 9/259 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL V+ ++R +P + + Y+ D+ PYGN + L + L +
Sbjct: 1 MSGPILVFDSGIGGLSVMNEIRKQLPLHDYCYLFDNARLPYGNLSEQELITGCVALITHH 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + V+ACNTA TL+ LR ++ +G VPAIK AA ++ I +L+TP T
Sbjct: 61 ARRLNASIVVVACNTASTLVLPLLRQQL-TIPIVGVVPAIKPAAMLSKKKHIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT LI+ + C + L + L E+Y +I D++ +
Sbjct: 120 VKRDYTQALINQFAGNCKVELFGTSDLVLLAEQYVAQQQIDMDKLNEI----LAPIAASN 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
DV+VL CTH+P+I V LD+ +++A+R R LL + ++
Sbjct: 176 IDVLVLGCTHFPMIATEISHYLGEGVTLLDSGEAVAKRVRFLLSK----ESNSNKQLQAC 231
Query: 252 LSGKPDIAMRRLMQGFGLK 270
+ ++ + +G
Sbjct: 232 YTKDIGQGLKAALVDYGFS 250
>gi|152978530|ref|YP_001344159.1| glutamate racemase [Actinobacillus succinogenes 130Z]
gi|150840253|gb|ABR74224.1| glutamate racemase [Actinobacillus succinogenes 130Z]
Length = 264
Score = 225 bits (574), Expect = 5e-57, Method: Composition-based stats.
Identities = 78/259 (30%), Positives = 136/259 (52%), Gaps = 5/259 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +IL FDSG+GG V +++ L+P+ H++Y D+ FPY + L +R+ + + I
Sbjct: 1 MKPTILFFDSGVGGFSVYSEVKSLLPDCHYLYCFDNAFFPYSERSEETLIERVSKICTTI 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+Y L VIACNTA T++ LR TF S+ +G VPAIK AA+ + + I +L+T T
Sbjct: 61 DIRYPLDLIVIACNTASTVVLPSLRRTF-SIPIVGTVPAIKPAASVSHTKHIGLLATKGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R Y + LI Y + C + + S +L E+ G + +++KE++ K
Sbjct: 120 VKREYVNTLIARYATDCRVERLGSTVLPEIAEQKIKGNSVDLLQLRKELQAWIC---LKD 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTH+PLI R P +LD+ +IA+R + LL + ++ +
Sbjct: 177 LDTVILGCTHFPLIKEEIRICLPQVKFFLDSGYAIAKRVKSLLENSKVRSEKEKNNRIFY 236
Query: 252 LSG-KPDIAMRRLMQGFGL 269
+ + ++ +G
Sbjct: 237 TKDFNFEQQFYQALKRWGF 255
>gi|227432402|ref|ZP_03914392.1| glutamate racemase [Leuconostoc mesenteroides subsp. cremoris ATCC
19254]
gi|227351841|gb|EEJ42077.1| glutamate racemase [Leuconostoc mesenteroides subsp. cremoris ATCC
19254]
Length = 291
Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats.
Identities = 51/257 (19%), Positives = 97/257 (37%), Gaps = 6/257 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
N I + DSGIGGL V+++ + +P IY+ D PYG + + + ++
Sbjct: 17 NNPIGLVDSGIGGLTVVKESQKQLPNEQLIYIGDTARMPYGPRSEKEVIDYTFQMTHYLV 76
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + VIACNTA +LR P + A + +Q+ I +++T T+
Sbjct: 77 NEQNIKMLVIACNTATARALSQLREQLCIPVIGVIQPGAEAAVSISQNKKIGLIATQGTV 136
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + + I + + VE + DE ++ I +
Sbjct: 137 ESQVYNEKMLAIDNNVQITSQAEPEFVTLVENNLY----QSDEAREVIAHHLSAFKEANI 192
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHAL 250
D ++L CTH+PL+ ++ V +D+ + L ++ H D
Sbjct: 193 DTLILGCTHFPLLTPFIQEAVGSDVTLVDSGAKTVAVMKQYLDELDIHSEVKHNHSDDIY 252
Query: 251 FLSGKPDIAMRRLMQGF 267
+G
Sbjct: 253 NTTGDKLKFKTIASSWL 269
>gi|89895983|ref|YP_519470.1| hypothetical protein DSY3237 [Desulfitobacterium hafniense Y51]
gi|89335431|dbj|BAE85026.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 295
Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats.
Identities = 60/262 (22%), Positives = 104/262 (39%), Gaps = 18/262 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q+ I +FDSG+GGL V++++ +P+ IY D PYGN L + S L
Sbjct: 19 QHVIGMFDSGVGGLTVMKEIVTQLPDVQIIYFGDTARVPYGNRSREELIHFGEEIIS-FL 77
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNT+ LR F P K A T +G I +++T AT+
Sbjct: 78 IEQGAEAIVVACNTSSANAVPVLREQFNLPLIGTIEPGAKAAIQATATGNIGLIATEATV 137
Query: 133 RRTYTSNLIHSYVSQCH-------IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
R S+ + +S+ + + + VE E +
Sbjct: 138 RSKAYSSAVRRILSKRRGGHAIELVKAQACPLFVPLVEAGLS----HSPEARGIARTYLA 193
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP------RINT 239
+ + D ++L CTHYP + V +++ + +D + ++ + +L
Sbjct: 194 PIQEAQVDALILGCTHYPFLAPVIQEILGEEIILVDPAQAMTEELKEVLKQLEYNRESGQ 253
Query: 240 HQTRVFDDHALFLSGKPDIAMR 261
+ H F+SG P + R
Sbjct: 254 ETHKAPGHHRFFVSGDPVLFER 275
>gi|300771876|ref|ZP_07081747.1| possible glutamate racemase [Sphingobacterium spiritivorum ATCC
33861]
gi|300761262|gb|EFK58087.1| possible glutamate racemase [Sphingobacterium spiritivorum ATCC
33861]
Length = 275
Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats.
Identities = 59/261 (22%), Positives = 98/261 (37%), Gaps = 8/261 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG GGL V ++++ +PEY +IY+ D+ PYGN + + L
Sbjct: 8 NSPIGVFDSGYGGLSVFKEIKKELPEYDYIYLGDNARIPYGNRSFETVYQFTKECVFK-L 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAF---LGAVPAIKQAAAYTQSGLISILSTP 129
L ++ACNTA ++ P + YT + I IL+T
Sbjct: 67 FDLGCDLVILACNTASAKALRSIQQHDLPPGKKVLGVIRPTTEIIKKYTITNKIGILATT 126
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ I+ + + + VE + ++K+I +
Sbjct: 127 GTVKSESYKIEINKFYPEIEVFQHDCPFWVPLVENNEIDTEGARYFVEKDIHELLSQ--S 184
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRVFDD 247
D IVLACTHYPL++ V +Q P + + +A + L R
Sbjct: 185 SEIDTIVLACTHYPLLLPVIKQFVPPHIQIISQGPIVAHSLKNYLERHPEVEQSCSKGST 244
Query: 248 HALFLSGKPDIAMRRLMQGFG 268
F + + FG
Sbjct: 245 LQFFTTDDASGFEEKAEIFFG 265
>gi|294649135|ref|ZP_06726577.1| glutamate racemase [Acinetobacter haemolyticus ATCC 19194]
gi|292825018|gb|EFF83779.1| glutamate racemase [Acinetobacter haemolyticus ATCC 19194]
Length = 295
Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats.
Identities = 66/265 (24%), Positives = 118/265 (44%), Gaps = 11/265 (4%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ I IFDSGIGGL + Q++ +P +Y AD PYG D ++
Sbjct: 16 QASADAPIGIFDSGIGGLSIAQEIALHLPNERILYYADTAHVPYGARSDQEIRNLTAQAI 75
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILS 127
L + ++V+ACNTA D LR + +G VPA+K A TQ+ ++++L+
Sbjct: 76 E-WLYRQGCKVAVVACNTASAFSLDYLRDHYGERFPIIGLVPALKPAVIQTQTKVVAVLA 134
Query: 128 TPATLRRTYTSNLIHSYVS--QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
TPAT R +++ ++ + V+++ L VE + K ++
Sbjct: 135 TPATFRGRLIKDVMLNFAEPAGVKVLTVTNLALVPFVEAGEQ----MSEACKAVLKQILQ 190
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+ D +VL CTHYP + RQ+ + +D+ ++AR+ +L + ++
Sbjct: 191 PVIEQGADFLVLGCTHYPFLKPAIRQVFDEKLKLIDSGQAVARQTAYILIKNGLLFDKIR 250
Query: 246 DDH---ALFLSGKPDIAMRRLMQGF 267
+ F+SG + ++Q
Sbjct: 251 HNVSRIECFVSGNNAAVLEPVLQHL 275
>gi|213159142|ref|YP_002321140.1| glutamate racemase [Acinetobacter baumannii AB0057]
gi|213058302|gb|ACJ43204.1| glutamate racemase [Acinetobacter baumannii AB0057]
Length = 266
Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats.
Identities = 65/259 (25%), Positives = 121/259 (46%), Gaps = 6/259 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
N I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+
Sbjct: 3 NNNNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLISN 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ + + V+ACNT + + +R+ S+ + PA+K A A TQS I++L+T
Sbjct: 63 LVTQGKCKAIVVACNTMTAVAIETIRAQI-SVPLIAIEPAVKPAVAITQSKHIAVLATAT 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ +LI +Y + LV + LA ++E E+K +E +
Sbjct: 122 TVKGQKLKSLIETYAQDIKVSLVPCIGLAEKIETGKA----YTAEVKDYLENILAPLVEQ 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHA 249
+ D I+L CTHYP + +++ + ++ S+++ + L + + + ++ +H
Sbjct: 178 KVDTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLNSESPNEGNHI 237
Query: 250 LFLSGKPDIAMRRLMQGFG 268
++ S P G
Sbjct: 238 IWTSSDPLEVADITFSLLG 256
>gi|85060131|ref|YP_455833.1| glutamate racemase [Sodalis glossinidius str. 'morsitans']
gi|123518781|sp|Q2NQZ7|MURI_SODGM RecName: Full=Glutamate racemase
gi|84780651|dbj|BAE75428.1| glutamate racemase [Sodalis glossinidius str. 'morsitans']
Length = 290
Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats.
Identities = 75/261 (28%), Positives = 133/261 (50%), Gaps = 7/261 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +IL+FDSG+GGL + ++R +P H++YV D+ FPYG + + R++ + +
Sbjct: 25 RPTILVFDSGVGGLSIYNEVRQTLPNAHYLYVFDNEAFPYGEKPEQFIVDRVVAIVGAMW 84
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+++ L ++ACNTA T+ LR FP +G VPAIK AA T++G++ +L+T AT+
Sbjct: 85 RQHKIDLVIVACNTASTISLPALRERFPC-PIIGVVPAIKPAARLTRNGIVGLLATRATV 143
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R+YT +LI Y C I + + L E G + ++K + +
Sbjct: 144 QRSYTHDLISQYAGDCQILQLGTAELVDMAEARLHGELVPLPVLRKLLRPWLRA--AEPP 201
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR----INTHQTRVFDDH 248
D +VL CTH+PL+ + + P +D+ +IARRA L+ + +
Sbjct: 202 DTVVLGCTHFPLLSQELQAVLPEGTRLVDSGSAIARRAAWLVEHDMDVSSLQGETGPNKT 261
Query: 249 ALFLSGKPDIAMRRLMQGFGL 269
++ +A+ + +G
Sbjct: 262 YCLVTTPQAVALMPALTRYGF 282
>gi|241759734|ref|ZP_04757834.1| glutamate racemase [Neisseria flavescens SK114]
gi|241319742|gb|EER56138.1| glutamate racemase [Neisseria flavescens SK114]
Length = 269
Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats.
Identities = 50/259 (19%), Positives = 95/259 (36%), Gaps = 6/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL ++ + +P + IY D PYG ++ M + +L
Sbjct: 6 QRPIGVFDSGVGGLTNVRALMERLPMENIIYFGDTARVPYGTKSRATIETFAMQIVDFLL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L + A + L+ + A T++ I I++T T+
Sbjct: 66 ENDVKALVIACNTIAAVAGQKILQKAGNMPVLDVISAGAEAALQTTKNNRIGIIATNTTV 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IHS + + ++ +L VE + + + +
Sbjct: 126 NSNAYARAIHSKNNDTLVRTQAAPLLVPLVE----EGWLDHEVTRLTVREYLKPLLADDI 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALF 251
D +VL CTH+PL+ + + V +D++ + A L + T D+ +
Sbjct: 182 DTLVLGCTHFPLLKPLISHEA-QNVTLVDSAITTAEATAKALAQAGLLNTENDNPDYRFY 240
Query: 252 LSGKPDIAMRRLMQGFGLK 270
+S P + G
Sbjct: 241 VSDIPLRFRTIGERFLGRS 259
>gi|126663124|ref|ZP_01734122.1| glutamate racemase [Flavobacteria bacterium BAL38]
gi|126624782|gb|EAZ95472.1| glutamate racemase [Flavobacteria bacterium BAL38]
Length = 259
Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats.
Identities = 62/255 (24%), Positives = 117/255 (45%), Gaps = 8/255 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+N I +FDSGIGG + +++ L+P + IY+AD PYG + +
Sbjct: 1 MINENPIGLFDSGIGGTSIWKEVHSLLPNENTIYLADSKNAPYGLKSKEEIIALSSKN-T 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
++L + ++ACNTA T ELR+ + + F+G PAIK AA +++ I IL+T
Sbjct: 60 ELLLNLNCKIIIVACNTATTNAIKELRAKY-DVPFIGIEPAIKPAAIQSKTQKIGILATK 118
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
TL + + + I L +E I E++ ++
Sbjct: 119 GTLNSELFH-ISAANHPEVKIIEQIGHGLVQLIE----NGDIDSAEMEDLLKSYLNPMIE 173
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
K D +VL C+HYP ++ +++ P + +D+ +++A++ + +L + T
Sbjct: 174 KNIDFLVLGCSHYPYLIPQIKKIIPAKIRIIDSGEAVAKQTQNILEQNFLINTSKNKSSQ 233
Query: 250 -LFLSGKPDIAMRRL 263
+ + +P++ L
Sbjct: 234 IFYTNSEPEVLKSIL 248
>gi|145589323|ref|YP_001155920.1| glutamate racemase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145047729|gb|ABP34356.1| glutamate racemase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 268
Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats.
Identities = 68/253 (26%), Positives = 111/253 (43%), Gaps = 7/253 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL +L + +PE ++Y+AD PYG + +R + L L
Sbjct: 4 IGVFDSGVGGLSILDEALRQLPENDYLYLADSANAPYGERSSDWIAQRSLALC-RYLANE 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA E+R+ S+ +G P IK AA +TQ+G++ +L+T ATL+
Sbjct: 63 GCDAIVVACNTATAQAIQEIRAQL-SIPVIGVEPGIKPAAMHTQNGIVGVLATEATLKSD 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ L+ + S C + L +E +E + + + +D I
Sbjct: 122 KFNALLATLPSNCRFIKQAGEGLVPLIESGNAN----SEETLELLAKHLEPIQDAGSDTI 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHALFLSG 254
VL CTHYP + R+L + +D SD++ R+ + L N + S
Sbjct: 178 VLGCTHYPFLRKSIRKLLGDSITLIDTSDAVVRQLKRQLELLQNLSTKKDVGSVTFISSK 237
Query: 255 KPDIAMRRLMQGF 267
D +
Sbjct: 238 NEDRLLSMASDLL 250
>gi|313206123|ref|YP_004045300.1| glutamate racemase [Riemerella anatipestifer DSM 15868]
gi|312445439|gb|ADQ81794.1| glutamate racemase [Riemerella anatipestifer DSM 15868]
gi|315022930|gb|EFT35953.1| glutamate racemase [Riemerella anatipestifer RA-YM]
gi|325336432|gb|ADZ12706.1| Glutamate racemase [Riemerella anatipestifer RA-GD]
Length = 271
Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats.
Identities = 55/258 (21%), Positives = 105/258 (40%), Gaps = 7/258 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL V ++++ MP + IY D PYG+ A+ + + L
Sbjct: 9 QQPIGVFDSGVGGLTVAKEIKRQMPHENIIYFGDTKHLPYGDKSKEAIVRFSEKIAE-FL 67
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSM-AFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ VIACN+A E++ + V + + AY + +++T AT
Sbjct: 68 LEQNCKAIVIACNSATANALKEVKELVGNRAIVFDVVNPVAEKIAYEIHTNVGVIATKAT 127
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ I + + +++ +L +EE I + + + K
Sbjct: 128 VNAGIYKKSIRRFNKFIKVDELATPLLVPAIEEGFKNHPITHSILYHYLSNS----KLKN 183
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHAL 250
+ ++L CTHYPL++ +Q V +D+ +A + L + + + +
Sbjct: 184 IETLILGCTHYPLLLEEIKQYYGSRVRVIDSPSIVANYIKISLEKHHLLNSEQKTTEMKF 243
Query: 251 FLSGKPDIAMRRLMQGFG 268
+LS + + FG
Sbjct: 244 YLSDLTKNFEKISKKFFG 261
>gi|219670410|ref|YP_002460845.1| glutamate racemase [Desulfitobacterium hafniense DCB-2]
gi|219540670|gb|ACL22409.1| glutamate racemase [Desulfitobacterium hafniense DCB-2]
Length = 295
Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats.
Identities = 60/262 (22%), Positives = 104/262 (39%), Gaps = 18/262 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q+ I +FDSG+GGL V++++ +P+ IY D PYGN L + S L
Sbjct: 19 QHVIGMFDSGVGGLTVMKEIVTQLPDVQIIYFGDTARVPYGNRSREELIHFGEEIIS-FL 77
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNT+ LR F P K A T +G I +++T AT+
Sbjct: 78 IEQGAEAIVVACNTSSANAVPVLREQFNLPLIGTIEPGAKAAIQATATGNIGLIATEATV 137
Query: 133 RRTYTSNLIHSYVSQCH-------IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
R S+ + +S+ + + + VE E +
Sbjct: 138 RSKAYSSAVRRILSKRRGGHAIELVKAQACPLFVPLVEAGLS----HSPEARGIARTYLA 193
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP------RINT 239
+ + D ++L CTHYP + V +++ + +D + ++ + +L
Sbjct: 194 PIQEAQVDALILGCTHYPFLAPVIQEILGEEIILVDPAQAMTEELKEVLKQLEYNRESGQ 253
Query: 240 HQTRVFDDHALFLSGKPDIAMR 261
+ H F+SG P + R
Sbjct: 254 ETHKAPGHHRFFVSGDPVLFER 275
>gi|226951878|ref|ZP_03822342.1| glutamate racemase [Acinetobacter sp. ATCC 27244]
gi|226837418|gb|EEH69801.1| glutamate racemase [Acinetobacter sp. ATCC 27244]
Length = 295
Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats.
Identities = 66/265 (24%), Positives = 118/265 (44%), Gaps = 11/265 (4%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ I IFDSGIGGL + Q++ +P +Y AD PYG D ++
Sbjct: 16 QASADAPIGIFDSGIGGLSIAQEIALHLPNERILYYADTAHVPYGARSDQEIRNLTAQAI 75
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILS 127
L + ++V+ACNTA D LR + +G VPA+K A TQ+ ++++L+
Sbjct: 76 E-WLYRQGCKVAVVACNTASAFSLDYLRDHYGERFPIIGLVPALKPAVIQTQTKVVAVLA 134
Query: 128 TPATLRRTYTSNLIHSYVS--QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
TPAT R +++ ++ + V+++ L VE + K ++
Sbjct: 135 TPATFRGRLIKDVMLNFAEPAGVKVLTVTNLALVPFVEAGEQ----MSEACKAVLKQILQ 190
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+ D +VL CTHYP + RQ+ + +D+ ++AR+ +L + ++
Sbjct: 191 PVIEQGADFLVLGCTHYPFLKPAIRQVFDEKLKLIDSGQAVARQTAYILIKNGLLFDKIR 250
Query: 246 DDH---ALFLSGKPDIAMRRLMQGF 267
+ F+SG + ++Q
Sbjct: 251 HNVSRIECFVSGNNAAVLEPVLQHL 275
>gi|194449428|ref|YP_002048128.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194407732|gb|ACF67951.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
Length = 260
Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats.
Identities = 83/256 (32%), Positives = 137/256 (53%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 2 LVFDSGVGGLSVYDEIRRLLPNLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R Y
Sbjct: 62 LSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRPY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S L E G + +E+++ + E D +V
Sbjct: 121 THELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEPP--DTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSTDANIAYCMAMTP 238
Query: 257 -DIAMRRLMQGFGLKS 271
+ ++Q +G ++
Sbjct: 239 GAEQLLPVLQRYGFET 254
>gi|169634511|ref|YP_001708247.1| glutamate racemase [Acinetobacter baumannii SDF]
gi|239500887|ref|ZP_04660197.1| glutamate racemase [Acinetobacter baumannii AB900]
gi|169153303|emb|CAP02411.1| glutamate racemase [Acinetobacter baumannii]
gi|193076216|gb|ABO10839.2| glutamate racemase [Acinetobacter baumannii ATCC 17978]
Length = 288
Score = 225 bits (573), Expect = 7e-57, Method: Composition-based stats.
Identities = 63/259 (24%), Positives = 119/259 (45%), Gaps = 11/259 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSGIGG+ V ++ +P +Y AD PYG D +++ L
Sbjct: 20 DAPIGIFDSGIGGMSVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRELTARAVD-WL 78
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ ++V+ACNTA D LR + +G VPA+K A T+S ++++L+TPAT
Sbjct: 79 YRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVAVLATPAT 138
Query: 132 LRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
R +++ + + + ++S+ L VE + + +++ ++
Sbjct: 139 FRGQLIKDVVEKFAVPAGVKVMTLTSLELVPCVEAGQQMSPVCLNALREVLQ----PAVE 194
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH- 248
+ D +VL CTHYP + L +D+ ++AR+ +L + ++ +
Sbjct: 195 QGADYLVLGCTHYPFLNEAIHHLFDNQFTLVDSGLAVARQTARILIKNELLCDQIRQNVA 254
Query: 249 --ALFLSGKPDIAMRRLMQ 265
++SG A++ ++Q
Sbjct: 255 RIECYVSGNNADALQPVLQ 273
>gi|46579181|ref|YP_009989.1| glutamate racemase [Desulfovibrio vulgaris str. Hildenborough]
gi|120603245|ref|YP_967645.1| glutamate racemase [Desulfovibrio vulgaris DP4]
gi|46448594|gb|AAS95248.1| glutamate racemase [Desulfovibrio vulgaris str. Hildenborough]
gi|120563474|gb|ABM29218.1| glutamate racemase [Desulfovibrio vulgaris DP4]
gi|311233019|gb|ADP85873.1| glutamate racemase [Desulfovibrio vulgaris RCH1]
Length = 282
Score = 225 bits (573), Expect = 7e-57, Method: Composition-based stats.
Identities = 65/267 (24%), Positives = 109/267 (40%), Gaps = 9/267 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
++ + I +FDSG+GGL VL+ +R MP +Y+ D PYG + + + S
Sbjct: 4 EQARLPIGLFDSGVGGLTVLKALRQRMPCEDMLYLGDTARLPYGTKSSETIARYALQATS 63
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L + + L V+ACNTA ++ D LR +P + +G V P + + + G I++++T
Sbjct: 64 K-LVERRIKLLVVACNTATSVALDTLREAYPGIPVIGVVEPGAQASCRASLQGRIAVIAT 122
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
+T+R IH Q HI + + EE I E + ++ F
Sbjct: 123 ESTIRGRAYHKAIHRLRPQAHIVGQACPLFVPLAEEGWVDGPIAESIAARYLDPIFKPAS 182
Query: 189 GKR----TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR- 243
G D +VL CTH+PL+ R + V +D++ + A L +
Sbjct: 183 GSDRVETPDCLVLGCTHFPLLARAIRNVIGPDVVIVDSAATTAFAVHQELDARGLIHPQH 242
Query: 244 --VFDDHALFLSGKPDIAMRRLMQGFG 268
+ R G
Sbjct: 243 GDDCGTTRFLTTDDVPRFARTGGLFLG 269
>gi|261346833|ref|ZP_05974477.1| glutamate racemase [Providencia rustigianii DSM 4541]
gi|282565012|gb|EFB70547.1| glutamate racemase [Providencia rustigianii DSM 4541]
Length = 287
Score = 225 bits (573), Expect = 7e-57, Method: Composition-based stats.
Identities = 83/264 (31%), Positives = 140/264 (53%), Gaps = 4/264 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ ++ +IL+FDSG+GGL V ++++ ++P H+IY D+ FPYG + + +R+ +
Sbjct: 21 DLSVRPTILVFDSGVGGLSVYREVKKMLPNAHYIYAFDNEAFPYGEKTEEFIIERVYQIV 80
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ + K+ ++VIACNTA T+ LR+ F + +G VPAIK A T++G++ +L+T
Sbjct: 81 NAVAKKHPLTIAVIACNTASTVSLPNLRAHF-TFPIVGVVPAIKPATKLTRNGIVGLLAT 139
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+ R YT LI + + C + L+ S L E G + DE+ + I KE
Sbjct: 140 KGTVNREYTKELIERFATDCKVILLGSAELVQLAERKLHGETLPLDEVAQAIRPWIKMKE 199
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
D ++L CTH+PLIV ++ P ++D+ +IARR L+ +D
Sbjct: 200 AP--DTVILGCTHFPLIVEELEKVLPNGTRFIDSGAAIARRTVWLINNQAEIANSNEEDF 257
Query: 249 ALF-LSGKPDIAMRRLMQGFGLKS 271
A L +R +++ G KS
Sbjct: 258 AYCMLMNDALQELRPVLESEGFKS 281
>gi|293610501|ref|ZP_06692801.1| predicted protein [Acinetobacter sp. SH024]
gi|292826845|gb|EFF85210.1| predicted protein [Acinetobacter sp. SH024]
Length = 266
Score = 225 bits (573), Expect = 7e-57, Method: Composition-based stats.
Identities = 63/259 (24%), Positives = 119/259 (45%), Gaps = 6/259 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
N I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+
Sbjct: 3 NNNNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLISN 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+++ V+ACNT + + +R+ ++ + PA+K A A TQS I++L+T
Sbjct: 63 LINDGNCKAIVVACNTMTAVAIETIRAQI-NVPLIAIEPAVKPAVAITQSKHIAVLATAT 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ +LI +Y + LV + LA ++E E+K ++ +
Sbjct: 122 TVKGKNLKSLIETYAQDIKVSLVPCIGLAEKIETGKA----HTAEVKDYLKNILAPLVEQ 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHA 249
+ D I+L CTHYP + +++ + ++ S+++ + L + + ++ +H
Sbjct: 178 KVDTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLSSESPNEGNHI 237
Query: 250 LFLSGKPDIAMRRLMQGFG 268
++ S P G
Sbjct: 238 IWTSSDPLEVADVTFSLLG 256
>gi|261363930|ref|ZP_05976813.1| glutamate racemase [Neisseria mucosa ATCC 25996]
gi|288567943|gb|EFC89503.1| glutamate racemase [Neisseria mucosa ATCC 25996]
Length = 269
Score = 224 bits (572), Expect = 7e-57, Method: Composition-based stats.
Identities = 56/260 (21%), Positives = 103/260 (39%), Gaps = 8/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL ++ + +P + IY D PYG ++ M + L
Sbjct: 6 QRPIGVFDSGVGGLTNVRALMERLPMENIIYFGDTARVPYGTKSRATIETFAMQIVD-FL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ VIACNT + ++R +M L + A + A T++ I I++T T
Sbjct: 65 LENDVKALVIACNTIAAVAGQKIRQKAGNMPVLDVISAGAQAALNTTRNNKIGIIATNTT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH+ + ++ +L VE + + + +
Sbjct: 125 VNSNAYARAIHAQNPDTLVRTQATPLLVPLVE----EGWLDHEVTRLTVREYLKPLLVDD 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A L + T D+
Sbjct: 181 IDTLVLGCTHFPLLKPLIGKEA-QNVALVDSAITTAEATAQALAQAGLLNTENDSPDYRF 239
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
++S P + G
Sbjct: 240 YVSDIPLRFRTIGERFLGRS 259
>gi|325123931|gb|ADY83454.1| putative glutamate racemase [Acinetobacter calcoaceticus PHEA-2]
Length = 266
Score = 224 bits (572), Expect = 7e-57, Method: Composition-based stats.
Identities = 64/259 (24%), Positives = 121/259 (46%), Gaps = 6/259 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
N I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+
Sbjct: 3 NNNNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLISN 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNT + + +R+ ++ + PA+K A A TQ+ I++L+T
Sbjct: 63 LVAQGKCKAIVIACNTMTAVAIETIRAQI-NVPLIAIEPAVKPAVAITQTKHIAVLATAT 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ +LI +Y + LV + LA ++E E+K +E +
Sbjct: 122 TVKGKNLKSLIETYAQHIKVSLVPCIGLAEKIETGKAHTV----EVKDYLENILAPLVEQ 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHA 249
+ D I+L CTHYP + + +++ + ++ S+++ + L + + ++ +H
Sbjct: 178 KVDTIILGCTHYPFVSDMIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLSSESPNEGNHI 237
Query: 250 LFLSGKPDIAMRRLMQGFG 268
++ S P G
Sbjct: 238 IWTSSDPLEVADVTFSLLG 256
>gi|210632427|ref|ZP_03297355.1| hypothetical protein COLSTE_01251 [Collinsella stercoris DSM 13279]
gi|210159522|gb|EEA90493.1| hypothetical protein COLSTE_01251 [Collinsella stercoris DSM 13279]
Length = 292
Score = 224 bits (572), Expect = 7e-57, Method: Composition-based stats.
Identities = 57/272 (20%), Positives = 97/272 (35%), Gaps = 17/272 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL V + + +P YV D PYG + ++ ++ L
Sbjct: 5 ERPIGVFDSGLGGLTVARCIAESLPHESIYYVGDTKRCPYGVRSEEEVRAFVLQ-AGHWL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + VIACNTA + P P + A T++ + +L+TP T+
Sbjct: 64 AEHDVKIMVIACNTATAAGLRIAQQILPVPVIGVIAPGARAAINSTRTRKVGVLATPLTV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVE------------EYACGIKIKEDEIKKEI 180
R + I + +++ + VE G E + E+
Sbjct: 124 RTGAYTRAIQDLDAGVNVYGCPAPSFVEIVERELATGAHLQERWLQDGDIFDTPENRAEV 183
Query: 181 EGCFIEKEG--KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
E + D +VL CTH+PL+ R V + +++ R +L R N
Sbjct: 184 ERTLAPIVEGGAQVDTVVLGCTHFPLLAGPIRHALGPDVRVVSSAEETTRELEDILRRRN 243
Query: 239 THQTRVF-DDHALFLSGKP-DIAMRRLMQGFG 268
H + FG
Sbjct: 244 QLAGIGHRPTHRFATTSDNIAEFAAAGSFIFG 275
>gi|227875772|ref|ZP_03993900.1| glutamate racemase [Mobiluncus mulieris ATCC 35243]
gi|269977417|ref|ZP_06184389.1| glutamate racemase [Mobiluncus mulieris 28-1]
gi|306819045|ref|ZP_07452762.1| glutamate racemase [Mobiluncus mulieris ATCC 35239]
gi|307700282|ref|ZP_07637322.1| glutamate racemase [Mobiluncus mulieris FB024-16]
gi|227843714|gb|EEJ53895.1| glutamate racemase [Mobiluncus mulieris ATCC 35243]
gi|269934333|gb|EEZ90895.1| glutamate racemase [Mobiluncus mulieris 28-1]
gi|304648238|gb|EFM45546.1| glutamate racemase [Mobiluncus mulieris ATCC 35239]
gi|307614493|gb|EFN93722.1| glutamate racemase [Mobiluncus mulieris FB024-16]
Length = 293
Score = 224 bits (572), Expect = 7e-57, Method: Composition-based stats.
Identities = 57/289 (19%), Positives = 103/289 (35%), Gaps = 38/289 (13%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I IFDSG+GGL V + + +P +Y+ D PYG +K + +
Sbjct: 2 NNAPIGIFDSGLGGLTVARAIIDQLPGESVVYIGDTANSPYGTKPVETVKHLALNVMDK- 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL---GAVPAIKQAAAYTQSGLISILST 128
L ++ + VIACNTA + + R+ + + PA+ +A + T +G I +++T
Sbjct: 61 LVEHGVKILVIACNTASAAVLFDARARYDRLGIPVLEVISPAVHRAVSATHNGKIGVIAT 120
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+ + +Y Q + + VE E+ + +
Sbjct: 121 STTIATGTYQRALGAY-QQVEVTAQACPAFVEFVERGITSG----SELLAKAREYLEPVK 175
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT------ 242
D +VL CTHYPL+ V + V + +S+ AR L +
Sbjct: 176 AGGVDTLVLGCTHYPLLTGVINYVMGSEVTLVSSSEETARDVYRTLLENDWLNEDDATGE 235
Query: 243 -----------------------RVFDDHALFLSGKPDIAMRRLMQGFG 268
+ + + +G ++ R + G
Sbjct: 236 INFSALNGGESGAVVESDSPVALKQSNRYQFLATGNTEVFTRLARRFLG 284
>gi|317057059|ref|YP_004105526.1| glutamate racemase [Ruminococcus albus 7]
gi|315449328|gb|ADU22892.1| glutamate racemase [Ruminococcus albus 7]
Length = 273
Score = 224 bits (572), Expect = 7e-57, Method: Composition-based stats.
Identities = 56/260 (21%), Positives = 104/260 (40%), Gaps = 6/260 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I +FDSG+GGL ++++ L+P +Y+ D PYG + +
Sbjct: 2 NNSPIGVFDSGVGGLTCVKELTKLLPHEDIVYLGDTARVPYGTRSKETIARYTAQDME-F 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLG--AVPAIKQAAAYTQSGLISILSTP 129
L + + ++AC TA ++I + + PA A A T++G I +++T
Sbjct: 61 LRGHDVKMILVACGTASSVIMSSPEFSGNTEPSYSGVVKPAANAACAATKNGRIGVIATG 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+R +I S + + + VE G + E +
Sbjct: 121 ATIRSGSYGKVIRSIDPDAKVIGKACPMFVPLVENGYVGKDCI--PTRYFAEEYLECMKR 178
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDH 248
++ D ++L CTHYPL+ + + V + +AR A L ++ R
Sbjct: 179 EQVDTLILGCTHYPLLADLISDIMGDGVKLISAGAELARFAVKTLTFSDSLADREEQGTQ 238
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
LF + P++ + + G
Sbjct: 239 KLFCTDTPELFSENVERFLG 258
>gi|168262957|ref|ZP_02684930.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|194446431|ref|YP_002043393.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|238912271|ref|ZP_04656108.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Tennessee str. CDC07-0191]
gi|194405094|gb|ACF65316.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|205348286|gb|EDZ34917.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
Length = 260
Score = 224 bits (572), Expect = 8e-57, Method: Composition-based stats.
Identities = 83/256 (32%), Positives = 138/256 (53%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 2 LVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R Y
Sbjct: 62 LSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRPY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S L E G + +E+++ + E D +V
Sbjct: 121 THELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEPP--DTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSTDTNIAYCMAMTP 238
Query: 257 -DIAMRRLMQGFGLKS 271
+ ++Q +G ++
Sbjct: 239 GAEQLLPVLQRYGFET 254
>gi|299768328|ref|YP_003730354.1| glutamate racemase [Acinetobacter sp. DR1]
gi|298698416|gb|ADI88981.1| glutamate racemase [Acinetobacter sp. DR1]
Length = 266
Score = 224 bits (572), Expect = 8e-57, Method: Composition-based stats.
Identities = 65/259 (25%), Positives = 120/259 (46%), Gaps = 6/259 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
N I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+
Sbjct: 3 NNNNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLISN 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNT + + +R+ ++ + PA+K A A TQS I++L+T
Sbjct: 63 LVAQGKCKAIVIACNTMTAVAIETIRAQI-NVPLIAIEPAVKPAVAITQSKHIAVLATAT 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ +LI +Y + LV + LA ++E +E+K +E +
Sbjct: 122 TVKGKNLKSLIETYAQDIKVSLVPCIGLAEKIETGKA----HTEEVKDYLENILAPLVEQ 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHA 249
+ D I+L CTHYP + +++ + ++ S+++ + L + ++ +H
Sbjct: 178 KVDTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQLIRQLNQYKLSSESPNEGNHI 237
Query: 250 LFLSGKPDIAMRRLMQGFG 268
++ S P G
Sbjct: 238 IWTSSDPLEVADVTFSLLG 256
>gi|293610177|ref|ZP_06692478.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827409|gb|EFF85773.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 288
Score = 224 bits (572), Expect = 8e-57, Method: Composition-based stats.
Identities = 64/259 (24%), Positives = 116/259 (44%), Gaps = 11/259 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSGIGG+ V ++ +P +Y AD PYG D +++ L
Sbjct: 20 DAPIGIFDSGIGGMSVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRELTARAVD-WL 78
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ ++V+ACNTA D LR + +G VPA+K A T+S ++++L+TPAT
Sbjct: 79 YRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVAVLATPAT 138
Query: 132 LRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
R +++ + + + ++S+ L VE + K ++
Sbjct: 139 FRGQLIKDVVEKFAVPAGVKVMTLTSLELVPCVEAGQQMG----EACLKALKEVLQPAAE 194
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH- 248
+ D +VL CTHYP + L +D+ ++AR+ +L + ++ +
Sbjct: 195 QGADYLVLGCTHYPFLNQAIHHLFDNQFTLVDSGLAVARQTARILIKNELLCDQIGQNVA 254
Query: 249 --ALFLSGKPDIAMRRLMQ 265
++SG A++ ++Q
Sbjct: 255 RIECYVSGNNAEALQPVLQ 273
>gi|78357785|ref|YP_389234.1| glutamate racemase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78220190|gb|ABB39539.1| glutamate racemase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 285
Score = 224 bits (572), Expect = 8e-57, Method: Composition-based stats.
Identities = 60/267 (22%), Positives = 104/267 (38%), Gaps = 7/267 (2%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
C+ + I +FDSG+GGL VL+ +R MP +Y+ D PYG + + +
Sbjct: 7 CDSRRDLPIGMFDSGVGGLTVLKALRRRMPCESILYLGDTARLPYGTKSAETVTRYALQ- 65
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126
S L + L V+ACNT + LR+ +P + +G V P + + + +G I+++
Sbjct: 66 ASARLVERDIKLLVVACNTVSATALEPLRNAYPGIPVIGVVQPGAQASCRASATGRIAVI 125
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T +T+R IH+ + EE + E + + F
Sbjct: 126 ATESTIRGRAYERAIHAIRPDAQTTGAPCPLFVPLAEEGWLDGPLVEGIAARYLNPIFHP 185
Query: 187 KEGKR----TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
G D +VL CTH+PL+ R + V +D++ A+ L +
Sbjct: 186 ASGSGRPETPDCLVLGCTHFPLLAGAIRNVIGDGVTIVDSAAITAKAVEAELRARGLERR 245
Query: 243 RVF-DDHALFLSGKPDIAMRRLMQGFG 268
+ + R G
Sbjct: 246 ATECGETRFMATDDVPRFSRTGGLFLG 272
>gi|237737770|ref|ZP_04568251.1| glutamate racemase [Fusobacterium mortiferum ATCC 9817]
gi|229419650|gb|EEO34697.1| glutamate racemase [Fusobacterium mortiferum ATCC 9817]
Length = 262
Score = 224 bits (572), Expect = 8e-57, Method: Composition-based stats.
Identities = 54/259 (20%), Positives = 102/259 (39%), Gaps = 9/259 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ SI +FDSG+GG VL+++ ++P + Y D PYG +++ + +
Sbjct: 5 KQSIGVFDSGVGGTTVLKEILSILPNENIFYYGDSKNSPYGQKSAEEIRELCYKILDFFI 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA D L++ + +K+A + + I+IL+TP T+
Sbjct: 65 AN-ECKAVVVACNTATAAALDSLKNRYSIPIIGVIDAGVKRALKVSSNNKINILATPFTV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + +E K + + +K I+ K+
Sbjct: 124 SSKAYITKFNKISKNISVTQEGCPEFCTMIETGWETHKDRYELLKNHIDN-----LSKKA 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALF 251
D ++L CTHYP+I + +D + A LL ++ T F
Sbjct: 179 DTLILGCTHYPIIREDIEKYFSG--KIVDPARETALELYSLLKLSDSLNTSDKKGRVDFF 236
Query: 252 LSGKPDIAMRRLMQGFGLK 270
+SG + + + G +
Sbjct: 237 VSGNKERFKKIAEKFLGFE 255
>gi|320539067|ref|ZP_08038738.1| glutamate racemase [Serratia symbiotica str. Tucson]
gi|320030705|gb|EFW12713.1| glutamate racemase [Serratia symbiotica str. Tucson]
Length = 287
Score = 224 bits (572), Expect = 8e-57, Method: Composition-based stats.
Identities = 84/260 (32%), Positives = 142/260 (54%), Gaps = 4/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++L+FDSG+GGL V Q++R L+P+ H+IY D+V FPYG + + +R++ + S +
Sbjct: 25 RPTVLVFDSGVGGLSVYQEVRQLLPDLHYIYTFDNVAFPYGEKSEEFIVERVLEITSAVQ 84
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ V+ +IACNTA T+ LR F S +G VPAIK AA +T +G++ +L+T T+
Sbjct: 85 QRHPMVMVIIACNTASTISLSALRERF-SFPVVGVVPAIKPAARFTANGIVGLLATRGTV 143
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R+YT LI + + C I L+ S L E G + +KK + +
Sbjct: 144 QRSYTHELIARFATDCKIELLGSSELVELAEAKLHGETVPLVTLKKILHPWLKM--SEPP 201
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PL+ + P +D+ +IARR L+ + D+ A +
Sbjct: 202 DTVVLGCTHFPLLAEELTLVLPEGTRLVDSGAAIARRTAWLISTQENLLSTQEDNLAYCM 261
Query: 253 S-GKPDIAMRRLMQGFGLKS 271
+ + A+ ++Q +G K+
Sbjct: 262 ALDENTDALLPILQRYGFKT 281
>gi|292486642|ref|YP_003529512.1| glutamate racemase [Erwinia amylovora CFBP1430]
gi|292897879|ref|YP_003537248.1| glutamate racemase [Erwinia amylovora ATCC 49946]
gi|291197727|emb|CBJ44822.1| glutamate racemase [Erwinia amylovora ATCC 49946]
gi|291552059|emb|CBA19096.1| Glutamate racemase [Erwinia amylovora CFBP1430]
gi|312170706|emb|CBX78969.1| Glutamate racemase [Erwinia amylovora ATCC BAA-2158]
Length = 283
Score = 224 bits (572), Expect = 8e-57, Method: Composition-based stats.
Identities = 83/261 (31%), Positives = 144/261 (55%), Gaps = 6/261 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++LIFDSG+GGL V ++R L+P+ H++Y D+V FPYG + + +R++ + + +
Sbjct: 21 RPTVLIFDSGVGGLSVYSEIRALLPDLHYLYAFDNVAFPYGEKSEEFIVERVLAIVTAVT 80
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+Y L VIACN+A T+ LR+ F + +G VPAIK AA T++G++ +L+T T+
Sbjct: 81 RRYPLALVVIACNSASTVTLPALRARF-AFPVVGVVPAIKPAARLTRNGIVGLLATRGTV 139
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT L+ + +C ++ S L E G + +E+++ ++ +
Sbjct: 140 KRPYTHELVARFAGECRTEMLGSGELVELAEAKLHGQPVAIEEVRRILQPWLRM--SEPP 197
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PLI +Q+ P +D+ +IARR LL + D+ AL L
Sbjct: 198 DTVVLGCTHFPLISEELQQVLPEGTRLIDSGAAIARRTVWLLENESPVAVSTDDNMALCL 257
Query: 253 SGKPDIA--MRRLMQGFGLKS 271
+ A + ++Q +G K+
Sbjct: 258 -DNTEQAVQLIPVLQRYGFKT 277
>gi|229101609|ref|ZP_04232332.1| Glutamate racemase [Bacillus cereus Rock3-28]
gi|228681851|gb|EEL36005.1| Glutamate racemase [Bacillus cereus Rock3-28]
Length = 264
Score = 224 bits (572), Expect = 8e-57, Method: Composition-based stats.
Identities = 49/253 (19%), Positives = 97/253 (38%), Gaps = 5/253 (1%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+ DSG+GGL V ++ +P+ Y+ D+ PYG ++ + + L ++
Sbjct: 1 MLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFVFEMVE-CLKQFPL 59
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
V+ACNTA L+ P + A T+ G I ++ T T++
Sbjct: 60 KALVVACNTAAAAALTALQEALSIPVIGVIHPGARAAIKVTKKGEIGVIGTVGTIQSNMY 119
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+H + +H + LA+ VE + ++++ + + D ++L
Sbjct: 120 EKALHELDTYLEVHSHACPTLATVVENQLE----DTAYVTQQVKQALLPLTKEDIDTLIL 175
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257
CTHYPL+ ++ V + +++ A +L + H F +G
Sbjct: 176 GCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTGSVL 235
Query: 258 IAMRRLMQGFGLK 270
+ G +
Sbjct: 236 SFEHIAERWLGYE 248
>gi|158333794|ref|YP_001514966.1| glutamate racemase [Acaryochloris marina MBIC11017]
gi|158304035|gb|ABW25652.1| glutamate racemase [Acaryochloris marina MBIC11017]
Length = 264
Score = 224 bits (572), Expect = 8e-57, Method: Composition-based stats.
Identities = 55/247 (22%), Positives = 98/247 (39%), Gaps = 7/247 (2%)
Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82
+GGL VL++++ +P F+Y D PYG + + + + ++++
Sbjct: 1 MGGLTVLKELQQQLPNESFLYFGDTANVPYGTRSQAEILGFVRQILCWM-TSQPIKMAIM 59
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNT+ L DE+R+ F +P + A + I +++TPAT+ I
Sbjct: 60 ACNTSSALALDEVRAEFDIPILGIILPGARAAVKQGK--RIGVIATPATVASESYPQAIQ 117
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ + + +E +I+E E + + + D +V CTHY
Sbjct: 118 EVNTTAKVFQEACPEFVPLIEHN----RIREPETLQIVHQHLHPLLQQGIDTLVYGCTHY 173
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRR 262
P + V RQ+ P V +D + I A+ L + F+SG P+
Sbjct: 174 PHLSGVIRQVLPSHVKTVDPAVYITTAAKQELKLLQLQNGHAAQTTRFFVSGCPEQFAEL 233
Query: 263 LMQGFGL 269
Q G
Sbjct: 234 SYQWLGF 240
>gi|134296381|ref|YP_001120116.1| glutamate racemase [Burkholderia vietnamiensis G4]
gi|134139538|gb|ABO55281.1| glutamate racemase [Burkholderia vietnamiensis G4]
Length = 286
Score = 224 bits (572), Expect = 8e-57, Method: Composition-based stats.
Identities = 67/257 (26%), Positives = 102/257 (39%), Gaps = 8/257 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL VL+ +R +P F+YVAD PYG ++ + +R + + L +
Sbjct: 16 PIGIFDSGLGGLSVLRAVRAQLPGESFVYVADSRHAPYGPRDEAFITERTLAICE-WLAR 74
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA +R S+ +G P IK AAA + +G+ +L+T +TL
Sbjct: 75 DGAKALVVACNTATARAIAAVRERL-SIPLVGVEPGIKPAAAVSATGVAGVLATQSTLNS 133
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
L+ Y + L +E ++ +E D
Sbjct: 134 PRFQALLDRYGAGRRFICQPGHGLVEAIERGDTN----SPALRALLERYLQPMIDAGADT 189
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT--HQTRVFDDHALFL 252
+VL CTHYP R L + +D SD+IAR+ +L
Sbjct: 190 LVLGCTHYPFFTAAIRDLVGDRLTIVDTSDAIARQLARVLDERGLRAPAGAPAAPPRFCS 249
Query: 253 SGKPDIAMRRLMQGFGL 269
+ GL
Sbjct: 250 TSDGVQLRALASTLLGL 266
>gi|242241176|ref|YP_002989357.1| glutamate racemase [Dickeya dadantii Ech703]
gi|242133233|gb|ACS87535.1| glutamate racemase [Dickeya dadantii Ech703]
Length = 295
Score = 224 bits (572), Expect = 9e-57, Method: Composition-based stats.
Identities = 83/263 (31%), Positives = 141/263 (53%), Gaps = 4/263 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ + S+LIFDSG+GGL V +++R L+P+ H+IY D+ FPYG + + +R++ +
Sbjct: 19 DLPARPSVLIFDSGVGGLSVYEEIRKLLPDLHYIYTFDNEAFPYGEKPEQFIIERVVSIV 78
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ ++ VIACNTA T+ LR+ F + +G VPAIK AA T++G++ +L+T
Sbjct: 79 DAVEKQHPLSAVVIACNTASTISLPALRARF-NFPVVGVVPAIKPAAKLTRNGVVGLLAT 137
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++R YT LI + C I + S L E G ++ D ++K ++ K
Sbjct: 138 RATVQRPYTHELISRFAHDCTILSLGSSELVEWGEAKLQGDEVPIDALRKILKPWL--KL 195
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
+ D +VL CTH+PL+ + +Q P +D+ +IARR L+ + +
Sbjct: 196 PEPPDTVVLGCTHFPLLANELQQALPEGTRLVDSGAAIARRTAWLVKHLENPFLSKEKNL 255
Query: 249 ALFLSGKPDIA-MRRLMQGFGLK 270
L+ P +A + ++Q +G
Sbjct: 256 VYCLAITPKVATLWPVLQRYGFH 278
>gi|161617274|ref|YP_001591239.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Paratyphi B str. SPB7]
gi|197262992|ref|ZP_03163066.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|198241754|ref|YP_002218058.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|200386743|ref|ZP_03213355.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|161366638|gb|ABX70406.1| hypothetical protein SPAB_05116 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|197241247|gb|EDY23867.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197936270|gb|ACH73603.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|199603841|gb|EDZ02386.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|312915247|dbj|BAJ39221.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|321225423|gb|EFX50481.1| Glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
Length = 260
Score = 224 bits (572), Expect = 9e-57, Method: Composition-based stats.
Identities = 83/256 (32%), Positives = 138/256 (53%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 2 LVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R Y
Sbjct: 62 LSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRPY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S L E G + +E+++ + E D +V
Sbjct: 121 THELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEPP--DTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSTDANIAYCMAMTP 238
Query: 257 -DIAMRRLMQGFGLKS 271
+ ++Q +G ++
Sbjct: 239 GAEQLLPVLQRYGFET 254
>gi|262280802|ref|ZP_06058585.1| glutamate racemase [Acinetobacter calcoaceticus RUH2202]
gi|262257702|gb|EEY76437.1| glutamate racemase [Acinetobacter calcoaceticus RUH2202]
Length = 288
Score = 224 bits (571), Expect = 9e-57, Method: Composition-based stats.
Identities = 63/263 (23%), Positives = 119/263 (45%), Gaps = 11/263 (4%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
I IFDSGIGG+ V ++ +P +Y AD PYG D +++
Sbjct: 16 NASADAPIGIFDSGIGGMSVAAEIARYLPNERIVYYADTAYVPYGPRSDEEIRELTARAV 75
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILS 127
L + ++V+ACNTA D LR + +G VPA+K A T+S ++++L+
Sbjct: 76 D-WLYRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVAVLA 134
Query: 128 TPATLRRTYTSNLIHSYVS--QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
TPAT R +++ + + ++++ L VE ++ + +K+ ++
Sbjct: 135 TPATFRGQLIKDVVEKFAIPAGVKVMTLTNLELVPCVEAGQQMGEVCLNALKEVLQ---- 190
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+ D +VL CTHYP + L +D+ ++AR+ +L + ++
Sbjct: 191 PAAEQGADYLVLGCTHYPFLNEAIHHLFDNQFTLVDSGLAVARQTARILIKNALLCDQIG 250
Query: 246 DDH---ALFLSGKPDIAMRRLMQ 265
+ ++SG A++ ++Q
Sbjct: 251 QNVARIECYVSGNNAEALQPVLQ 273
>gi|254520425|ref|ZP_05132481.1| glutamate racemase [Clostridium sp. 7_2_43FAA]
gi|226914174|gb|EEH99375.1| glutamate racemase [Clostridium sp. 7_2_43FAA]
Length = 257
Score = 224 bits (571), Expect = 9e-57, Method: Composition-based stats.
Identities = 64/256 (25%), Positives = 107/256 (41%), Gaps = 6/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I FDSG+GGL V+++ +MP ++IY D PYG ++ +L
Sbjct: 5 NRPIGFFDSGVGGLSVMKEAIQVMPNENYIYFGDSKNAPYGVKSVEEVRDLTFKAVEFLL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+K IACNTA + +LR +P + +G PA+K A + G I I++T TL
Sbjct: 65 NK-GVKGIAIACNTATSAAVADLRKIYPDLPLVGIEPALKPAVELNKDGNILIMATSMTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L++ Y + I V L +E K+ E+++ + G +
Sbjct: 124 KEEKFNRLMNRYKDRASIIPVPCPGLVEFIE----AGKLDGKEVEEYLFEKVNTYNGGKI 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHALF 251
IVL CTHYP I ++ + +D A+ R L N ++R +
Sbjct: 180 ASIVLGCTHYPFIKDTLVKIIGKDITIIDGGLGTAKELRRRLSEKNLLTESRENGTIEII 239
Query: 252 LSGKPDIAMRRLMQGF 267
S + + +
Sbjct: 240 NSSNKNEVIDLSYRLL 255
>gi|189345889|ref|YP_001942418.1| glutamate racemase [Chlorobium limicola DSM 245]
gi|189340036|gb|ACD89439.1| glutamate racemase [Chlorobium limicola DSM 245]
Length = 274
Score = 224 bits (571), Expect = 9e-57, Method: Composition-based stats.
Identities = 64/258 (24%), Positives = 115/258 (44%), Gaps = 7/258 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ I IFDSG+GGL V++ M+ ++P IY D PYG+ ++K + IL
Sbjct: 11 ESPIGIFDSGVGGLTVVRAMQAILPAERLIYFGDTARVPYGSKSQVTIRKYAHDDTA-IL 69
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+YQP + ++ACNT L D + T ++ +G + A + A + ++ I ++ T AT
Sbjct: 70 MRYQPKMIIVACNTVSALALDVVEKTCGNIPVIGVLEAGAQLAVSRSEHKRIGVIGTQAT 129
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + I+ S+ +H + + EE + +G
Sbjct: 130 VCSNAYACAINMLDSEVTVHSKACPLFVPLAEEGFT----DHPATRLIAAEYLRAFDGHD 185
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHAL 250
D +VL CTHYP++ + Q + +D+++++A RA+ LL T ++ L
Sbjct: 186 IDTLVLGCTHYPILRSMIEQTIGPDIRIIDSAEAVACRAKELLTETGMLNTTSETENPHL 245
Query: 251 FLSGKPDIAMRRLMQGFG 268
+S P G
Sbjct: 246 LVSDLPQKFSMLYRLFMG 263
>gi|222111527|ref|YP_002553791.1| glutamate racemase [Acidovorax ebreus TPSY]
gi|221730971|gb|ACM33791.1| glutamate racemase [Acidovorax ebreus TPSY]
Length = 291
Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats.
Identities = 68/276 (24%), Positives = 119/276 (43%), Gaps = 19/276 (6%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFSDIL 72
I +FDSGIGGL VLQ +R +P HF+Y+AD PYG+ D +++R + + +
Sbjct: 8 RPIGVFDSGIGGLSVLQALRHELPHEHFVYLADSGNAPYGDAKGDAFVQQRTLAIARWLR 67
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + V+ACNTA ++LR+ P + +G PA+K AAA +Q+ + +L+T T+
Sbjct: 68 EHHGIKALVVACNTATAAAVEQLRAALPDLPAIGVEPALKPAAASSQTHHVGVLATRGTV 127
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE------ 186
L + + + LA +E+ + + +IE ++
Sbjct: 128 GSARFQRLRDGHSAGTRFSVQPCDGLARAIEQ-STEEPLPAAASMAKIEALCVQYTGALG 186
Query: 187 ---KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
+ D +VL CTHY + R L V +D +AR+ R +L + +
Sbjct: 187 TFGLKTGEIDTLVLGCTHYVFAKDMLRALVGPDVQIIDTGAPVARQTRRILDQTHALAPE 246
Query: 244 --------VFDDHALFLSGKPDIAMRRLMQGFGLKS 271
L+ +G+ + L +
Sbjct: 247 HAVDGAPAAPGHIQLYTTGQLAALQSAAERWLQLPA 282
>gi|161505378|ref|YP_001572490.1| glutamate racemase [Salmonella enterica subsp. arizonae serovar
62:z4,z23:-- str. RSK2980]
gi|194472599|ref|ZP_03078583.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194738355|ref|YP_002117043.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|213051820|ref|ZP_03344698.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E00-7866]
gi|213427064|ref|ZP_03359814.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E02-1180]
gi|213646315|ref|ZP_03376368.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. J185]
gi|224585944|ref|YP_002639743.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|289830049|ref|ZP_06547498.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-3139]
gi|16504616|emb|CAD09499.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29139435|gb|AAO71002.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|160866725|gb|ABX23348.1| hypothetical protein SARI_03532 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
gi|194458963|gb|EDX47802.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194713857|gb|ACF93078.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|224470472|gb|ACN48302.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|322613115|gb|EFY10059.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322619257|gb|EFY16140.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322626123|gb|EFY22935.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322626417|gb|EFY23223.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322632469|gb|EFY29217.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322635048|gb|EFY31769.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322642749|gb|EFY39339.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322646426|gb|EFY42937.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322648559|gb|EFY45009.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322654820|gb|EFY51138.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322657287|gb|EFY53567.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322662226|gb|EFY58441.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322669773|gb|EFY65917.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322672032|gb|EFY68147.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322675753|gb|EFY71825.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322681831|gb|EFY77857.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322683974|gb|EFY79983.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|323193245|gb|EFZ78460.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323197603|gb|EFZ82736.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323202193|gb|EFZ87248.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323207172|gb|EFZ92124.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|323211374|gb|EFZ96215.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323218581|gb|EGA03289.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323220937|gb|EGA05369.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323226066|gb|EGA10284.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323231593|gb|EGA15705.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323236901|gb|EGA20972.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323239421|gb|EGA23470.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323243986|gb|EGA27997.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323249349|gb|EGA33266.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323250408|gb|EGA34291.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323258862|gb|EGA42514.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323260886|gb|EGA44486.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323265226|gb|EGA48723.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323270448|gb|EGA53894.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
Length = 260
Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats.
Identities = 83/256 (32%), Positives = 138/256 (53%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 2 LVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R Y
Sbjct: 62 LSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRPY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S L E G + +E+++ + E D +V
Sbjct: 121 THELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEPP--DTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSTDANIAYCMAMTP 238
Query: 257 -DIAMRRLMQGFGLKS 271
+ ++Q +G ++
Sbjct: 239 GAEQLLPVLQRYGFET 254
>gi|127511073|ref|YP_001092270.1| glutamate racemase [Shewanella loihica PV-4]
gi|166231053|sp|A3Q963|MURI_SHELP RecName: Full=Glutamate racemase
gi|126636368|gb|ABO22011.1| glutamate racemase [Shewanella loihica PV-4]
Length = 266
Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats.
Identities = 75/260 (28%), Positives = 130/260 (50%), Gaps = 7/260 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +IL+FDSG+GGL +L +R +P ++ Y+ D+ PYG ++ L + + L S
Sbjct: 1 MSANILVFDSGVGGLSILAAVREQLPSANYCYLFDNARLPYGELDEQELIQGCVTLISQA 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + Q + V+ACN+A TLI LR+ + +G VPAIK AAA +Q + +L+TP T
Sbjct: 61 VIQCQADIVVVACNSASTLILPALRACLK-VPVVGVVPAIKPAAALSQKKHLGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R YT +LI + S C + S L E+ + + + + +
Sbjct: 120 VNRQYTQDLIDQFASDCRVDRFGSSELVYLAEDKMAQRPVDSEALHRI----LAPIKASG 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTH+P++ + V LD+S++IA R LL + + AL+
Sbjct: 176 LDTLILGCTHFPILREELQSYLGEGVHLLDSSNAIAARVVSLLE--PSMSGEIGKSQALY 233
Query: 252 LSGKPDIAMRRLMQGFGLKS 271
+ +R+ + +G +S
Sbjct: 234 TTDSICEGLRKTLAAWGFRS 253
>gi|313115114|ref|ZP_07800601.1| glutamate racemase [Faecalibacterium cf. prausnitzii KLE1255]
gi|310622554|gb|EFQ06022.1| glutamate racemase [Faecalibacterium cf. prausnitzii KLE1255]
Length = 275
Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats.
Identities = 55/259 (21%), Positives = 95/259 (36%), Gaps = 4/259 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL ++++R +P IY D PYG+ + + + +L
Sbjct: 3 NRPIGVFDSGLGGLTGVRELRKRLPHEEIIYFGDTGRVPYGSRSPETILQYARQDVAFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + AC T + + P A ++AA T++ I ++ T AT+
Sbjct: 63 SK-NVKCIMAACGTVSSTYPAAEAAKLPVPYLGVVDAAAREAAFATRNRRIGVIGTAATI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE--DEIKKEIEGCFIEKEGK 190
R L+ V I + + VE + K I E
Sbjct: 122 RSRSYEKLLRQLVPGVEITAQACPLFVPLVEAGYVDHSEESRQQVTKLVIAQYLTEVREA 181
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHA 249
D ++L CTHYPL+ + + V +D + + A +L +
Sbjct: 182 GVDTLILGCTHYPLLKTMIGEFMGQSVTLVDPAKTAAHHLEQMLSERGLKAAQEHEGQAH 241
Query: 250 LFLSGKPDIAMRRLMQGFG 268
++S PD ++ G
Sbjct: 242 FYVSDVPDSFVQTADLFLG 260
>gi|121602574|ref|YP_989115.1| glutamate racemase [Bartonella bacilliformis KC583]
gi|166231026|sp|A1UT12|MURI_BARBK RecName: Full=Glutamate racemase
gi|120614751|gb|ABM45352.1| glutamate racemase [Bartonella bacilliformis KC583]
Length = 271
Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats.
Identities = 129/260 (49%), Positives = 173/260 (66%), Gaps = 2/260 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++ FDSGIGGL VL++ R L+PE F+YVADD GFPYG WE+ LK R++ +F+++L
Sbjct: 3 EKPVIFFDSGIGGLTVLKEARILIPELQFVYVADDAGFPYGAWEEDVLKGRILKVFTNLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Y P L VIACNTA TL+ +LR FP + F+G VPAIK AAA T+SGLIS+L+TP T+
Sbjct: 63 KLYTPALCVIACNTASTLMISDLRQEFPHIPFVGTVPAIKSAAAQTKSGLISVLATPGTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT LI S+ +QCH+ LV S LA+ E Y G I +E++ EI CF+EK GK T
Sbjct: 123 KRAYTHELISSFANQCHVELVGSKKLATFAENYLRGYPIDYEELRHEILPCFVEKNGKYT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR--INTHQTRVFDDHAL 250
DVIVLACTHYP ++ +F + + W V+W+D + +IAR R LL N + ++AL
Sbjct: 183 DVIVLACTHYPFLISLFHKQALWSVNWIDPAKAIARHTRSLLLETMKNKSSKKNIKNYAL 242
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
F S D RL+Q F L
Sbjct: 243 FTSQNIDFVTERLLQRFNLN 262
>gi|315633799|ref|ZP_07889089.1| glutamate racemase [Aggregatibacter segnis ATCC 33393]
gi|315477841|gb|EFU68583.1| glutamate racemase [Aggregatibacter segnis ATCC 33393]
Length = 278
Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats.
Identities = 85/265 (32%), Positives = 135/265 (50%), Gaps = 9/265 (3%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ + +IL FDSG+GGL V Q+++ L+P+YH++Y D+ FPY + + +R + +
Sbjct: 2 NIQSKPTILFFDSGVGGLSVYQEVKQLLPDYHYLYCFDNAYFPYSEKPEEGIVERTLKIC 61
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
I L VIACNTA T++ LR F S+ +G VPAIK AA T++ I +L+T
Sbjct: 62 QRIEKLCPLDLIVIACNTASTVVLPVLRKHF-SIPIVGTVPAIKPAAEQTKTKHIGLLAT 120
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++R Y S+LI Y S C + + S L E G I +EIK E+ +
Sbjct: 121 KGTVKRQYLSDLIDKYASFCQVEKIGSTKLVELAEHKLHGYPIDLNEIKAELSEW---EN 177
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
D +VL CTH+PL+ +Q P ++D+ +IA+R + LL + +
Sbjct: 178 IPDLDAVVLGCTHFPLLKSEIQQCLPQVKYFIDSGAAIAKRVKSLLKDVKVRSKNQMNSQ 237
Query: 249 ALFLSGKP---DIAMRRLMQGFGLK 270
KP + ++ L+ G +
Sbjct: 238 VFCT--KPLVKEDSLLELIHSLGFE 260
>gi|184156710|ref|YP_001845049.1| glutamate racemase [Acinetobacter baumannii ACICU]
gi|332873119|ref|ZP_08441076.1| glutamate racemase [Acinetobacter baumannii 6014059]
gi|183208304|gb|ACC55702.1| Glutamate racemase [Acinetobacter baumannii ACICU]
gi|322506599|gb|ADX02053.1| murI [Acinetobacter baumannii 1656-2]
gi|323516476|gb|ADX90857.1| glutamate racemase [Acinetobacter baumannii TCDC-AB0715]
gi|332738631|gb|EGJ69501.1| glutamate racemase [Acinetobacter baumannii 6014059]
Length = 288
Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats.
Identities = 63/259 (24%), Positives = 114/259 (44%), Gaps = 11/259 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSGIGG+ V ++ +P +Y AD PYG D +++ L
Sbjct: 20 DAPIGIFDSGIGGMSVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRELTARAVD-WL 78
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ ++V+ACNTA D LR + +G VPA+K A T+S ++++L+TPAT
Sbjct: 79 YRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVAVLATPAT 138
Query: 132 LRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
R +++ + + + ++S+ L VE + +
Sbjct: 139 FRGQLIKDVVEKFAVPAGVKVMTLTSLELVPCVE----AGQQMSPACLNALREVLQPAVE 194
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH- 248
+ D +VL CTHYP + L +D+ ++AR+ +L + ++ +
Sbjct: 195 QGADYLVLGCTHYPFLNEAIHYLFDNQFTLVDSGLAVARQTARILIKNELLCDQMRQNVA 254
Query: 249 --ALFLSGKPDIAMRRLMQ 265
++SG A++ ++Q
Sbjct: 255 RIECYVSGNNADALQPVLQ 273
>gi|169797366|ref|YP_001715159.1| glutamate racemase [Acinetobacter baumannii AYE]
gi|213155819|ref|YP_002317864.1| glutamate racemase [Acinetobacter baumannii AB0057]
gi|215484806|ref|YP_002327041.1| glutamate racemase [Acinetobacter baumannii AB307-0294]
gi|301345461|ref|ZP_07226202.1| glutamate racemase [Acinetobacter baumannii AB056]
gi|301511091|ref|ZP_07236328.1| glutamate racemase [Acinetobacter baumannii AB058]
gi|332851876|ref|ZP_08433779.1| glutamate racemase [Acinetobacter baumannii 6013150]
gi|332867934|ref|ZP_08437922.1| glutamate racemase [Acinetobacter baumannii 6013113]
gi|169150293|emb|CAM88190.1| glutamate racemase [Acinetobacter baumannii AYE]
gi|213054979|gb|ACJ39881.1| glutamate racemase [Acinetobacter baumannii AB0057]
gi|213987180|gb|ACJ57479.1| glutamate racemase [Acinetobacter baumannii AB307-0294]
gi|332729661|gb|EGJ60997.1| glutamate racemase [Acinetobacter baumannii 6013150]
gi|332733635|gb|EGJ64794.1| glutamate racemase [Acinetobacter baumannii 6013113]
Length = 288
Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats.
Identities = 62/259 (23%), Positives = 118/259 (45%), Gaps = 11/259 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSGIGG+ V ++ +P +Y AD PYG D +++ L
Sbjct: 20 DAPIGIFDSGIGGMSVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRELTARAVD-WL 78
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ ++V+ACNTA D LR + +G VPA+K A T+S ++++L+TPAT
Sbjct: 79 YRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVAVLATPAT 138
Query: 132 LRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
R +++ + + + ++S+ L VE + + +++ ++
Sbjct: 139 FRGQLIKDVVEKFAVPAGVKVMTLTSLELVPCVEAGQQMSPVCLNALREVLQ----PAVE 194
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH- 248
+ D +VL CTHYP + L +D+ ++AR+ +L + ++ +
Sbjct: 195 QGADYLVLGCTHYPFLNEAIHHLFDNQFTLVDSGLAVARQTARILIKNELLCDQIRQNVA 254
Query: 249 --ALFLSGKPDIAMRRLMQ 265
++SG ++ ++Q
Sbjct: 255 RIECYVSGNNADVLQPVLQ 273
>gi|325266613|ref|ZP_08133290.1| glutamate racemase [Kingella denitrificans ATCC 33394]
gi|324982056|gb|EGC17691.1| glutamate racemase [Kingella denitrificans ATCC 33394]
Length = 287
Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 60/272 (22%), Positives = 114/272 (41%), Gaps = 8/272 (2%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
+ ID I +FDSG+GGL V++ + +P + +Y D PYG + +
Sbjct: 12 LSIDIRTMNANNSKPIGVFDSGVGGLTVVRALMERLPNENIVYFGDTARVPYGVKSRNTI 71
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQ 119
+ + + L + Q VIACNT + +++ +M L + A + A A T+
Sbjct: 72 EDFSLQIVD-FLLQNQVKALVIACNTIAAVAGAKVQQMAGNMPVLSVIEAGAQAALATTR 130
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+ I +++T T+ + IH++ I ++ +L VE + + +
Sbjct: 131 NNHIGVIATNTTVNSNAYARAIHAHNPDTRILSQAAPLLVPLVE----EGWLDHEVTRLT 186
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
+ + D ++L CTHYPL+ + RQ +P ++ +D+S + A L
Sbjct: 187 VREYLKPLLADKIDTLILGCTHYPLLKPLIRQEAP-HIELVDSSTTTAEATAQALAAAQL 245
Query: 240 HQTRV-FDDHALFLSGKPDIAMRRLMQGFGLK 270
T+ D+ ++S P + G
Sbjct: 246 LNTQPCTPDYRFYVSDIPLRFQTIGERFLGRS 277
>gi|42518578|ref|NP_964508.1| glutamate racemase [Lactobacillus johnsonii NCC 533]
gi|81668196|sp|Q74KU5|MURI_LACJO RecName: Full=Glutamate racemase
gi|41582863|gb|AAS08474.1| glutamate racemase [Lactobacillus johnsonii NCC 533]
Length = 266
Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 53/256 (20%), Positives = 92/256 (35%), Gaps = 7/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I + DSG+GGL VL+K+ MP I++ D PYG+ + + +L
Sbjct: 3 NRPIGVLDSGLGGLTVLKKVIEKMPNESTIFIGDQANMPYGDRSREEIISLTRDSVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + + CNTA + ++ P AA T++ ++++ T AT+
Sbjct: 63 SK-DVKIIIFGCNTATAVAMATIQKEIPLQIIGVVQSGALAAARTTETKNVAVIGTKATV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + + + LA E ED + +
Sbjct: 122 ASHSYLKEIQYRDPEIKVSEFAQPKLAPLAE-----EDPDEDTKNAVVSESLTPLKNADY 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALF 251
D +VL CTHYPL+ + +D +D +A+ +L R + H +
Sbjct: 177 DTLVLGCTHYPLLRDEIVAVVGQDKKIVDPADQVAQYTYNVLRRDDLFAESTAPVKHDYY 236
Query: 252 LSGKPDIAMRRLMQGF 267
+G+ Q
Sbjct: 237 TTGEAKKFTEITRQWM 252
>gi|301156626|emb|CBW16097.1| glutamate racemase [Haemophilus parainfluenzae T3T1]
Length = 263
Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 77/260 (29%), Positives = 127/260 (48%), Gaps = 6/260 (2%)
Query: 12 LQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ +L FDSG+GGL V ++ + LMP+ H++Y D+ GFPY + + +R + +
Sbjct: 1 MNKPTVLFFDSGMGGLSVYREAKKLMPDNHYLYCFDNAGFPYSEKSEETIIQRTLDICKK 60
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
I Y VIACNTA T++ LR F S+ +G VPAIK AA +Q+ I +L+T
Sbjct: 61 INQNYPLDAIVIACNTASTVVLPPLREQF-SIPIVGTVPAIKPAAEISQTKHIGLLATKG 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++R Y ++LIH + S C + + S L E G + +K E+ +
Sbjct: 120 TVKRPYVNDLIHQFASHCIVERLGSTKLVEIAEHKIQGKSVDLIALKNELSPWAS---IE 176
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D I L CTH+PLI + P +++D +IA+R + LL ++ +
Sbjct: 177 NLDTICLGCTHFPLIKDEIQICLPQVKNFMDPGFAIAKRLQFLLDKLEVQSKSEVKNQVF 236
Query: 251 FLSG-KPDIAMRRLMQGFGL 269
+ + + + +G
Sbjct: 237 CTQDVENKHQLEQALALWGF 256
>gi|237728080|ref|ZP_04558561.1| glutamate racemase [Citrobacter sp. 30_2]
gi|226910337|gb|EEH96255.1| glutamate racemase [Citrobacter sp. 30_2]
Length = 283
Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 82/261 (31%), Positives = 144/261 (55%), Gaps = 6/261 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + +
Sbjct: 21 RPTVLVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSEEFIVERVVEIVTAVQ 80
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+Y L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT+
Sbjct: 81 QRYPLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATV 139
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R+YT LI + ++C I ++ S L E G + +E+++ + +
Sbjct: 140 KRSYTHELIARFANECQIAMLGSAELVELAEAKLHGETVSLEELRRILRPWLRM--SEPP 197
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF- 251
D +VL CTH+PL+ Q+ P +D+ +IARR LL ++ A
Sbjct: 198 DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSTDENVAFCM 257
Query: 252 -LSGKPDIAMRRLMQGFGLKS 271
++ + + + ++Q +G K+
Sbjct: 258 AMTTEAEQLL-PVLQRYGFKT 277
>gi|330817737|ref|YP_004361442.1| Glutamate racemase [Burkholderia gladioli BSR3]
gi|327370130|gb|AEA61486.1| Glutamate racemase [Burkholderia gladioli BSR3]
Length = 288
Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 69/256 (26%), Positives = 112/256 (43%), Gaps = 8/256 (3%)
Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61
D + + IFDSG+GGL VL+ +R +P+ F+YVAD PYG +D +
Sbjct: 4 PTDFASEDSTTAAPVGIFDSGLGGLSVLRAVRAQLPDESFVYVADSRHAPYGERDDAFII 63
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
+R + + + L V+ACNTA +R T ++ +G P IK A ++S
Sbjct: 64 ERTLAI-GEWLAARGAKALVVACNTATAQSIAVVRETL-AIPLVGVEPGIKPATLASRSR 121
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ +L+T ATLR +LI Y + C L +E G ++ ++
Sbjct: 122 VAGVLATAATLRSARFESLIERYAADCRFLRQPGHGLVEAIERGDTG----SPALRALLD 177
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
G D +VL CTHYP + R+L+ + +D S++IAR+ +L
Sbjct: 178 GYLEPMLAAGADTLVLGCTHYPFLDATIRELTQDRLTLIDTSEAIARQLARVLEDHGLRA 237
Query: 242 TRVFDDH--ALFLSGK 255
L+ +
Sbjct: 238 PAGTAARPPRLYSTDD 253
>gi|325124352|gb|ADY83875.1| glutamate racemase [Acinetobacter calcoaceticus PHEA-2]
Length = 288
Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 63/259 (24%), Positives = 115/259 (44%), Gaps = 11/259 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSGIGG+ V ++ +P +Y AD PYG D +++ L
Sbjct: 20 DAPIGIFDSGIGGMSVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRELTARAVD-WL 78
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ ++V+ACNTA D LR + +G VPA+K A T+S ++++L+TPAT
Sbjct: 79 YRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVAVLATPAT 138
Query: 132 LRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
R +++ + + + ++S+ L VE + K ++
Sbjct: 139 FRGQLIKDVVEKFAVPAGVKVMTLTSLELVPCVEAGQQMG----EACLKALKEVLQPAAE 194
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH- 248
+ D +VL CTHYP + L +D+ ++AR+ +L + ++ +
Sbjct: 195 QGADYLVLGCTHYPFLNQAIHHLFDNQFTLVDSGLAVARQTARILIKNELLCDQIGQNVA 254
Query: 249 --ALFLSGKPDIAMRRLMQ 265
++SG ++ ++Q
Sbjct: 255 RIECYVSGNNAEVLQPVLQ 273
>gi|221068298|ref|ZP_03544403.1| glutamate racemase [Comamonas testosteroni KF-1]
gi|220713321|gb|EED68689.1| glutamate racemase [Comamonas testosteroni KF-1]
Length = 298
Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 69/275 (25%), Positives = 120/275 (43%), Gaps = 17/275 (6%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFSDIL 72
+ I IFDSG+GGL VLQ +R +P F+Y+AD PYG+ D +++R + + +L
Sbjct: 6 SPIGIFDSGVGGLSVLQALRHELPHEQFVYLADSGNAPYGDARGDAFVQERSLAIAQYLL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + VIACNTA + +R P + +G PAIK A+ +Q+ + +++T T+
Sbjct: 66 QQHDIKILVIACNTATAAAVELMRERMPQLPVIGVEPAIKPASFSSQTHHVGVMATRGTV 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEE---YACGIKIKEDEIKKEIEGCFIEK-- 187
+ L+ + + HL + LA +E+ A EI+
Sbjct: 126 SSQRVARLVAEHGQRAEFHLQACDGLARAIEQSTEQALPEDASATEIRALCTKYTSALGS 185
Query: 188 ---EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
+ + D +VL CTHY + R L + +LD +AR+ R +L + +
Sbjct: 186 FGHKTGQMDTLVLGCTHYVFVKDDLRALLGPDIQFLDTGAPVARQTRRMLEQRHLLGPET 245
Query: 245 FDD--------HALFLSGKPDIAMRRLMQGFGLKS 271
L +G+ + L +
Sbjct: 246 DGSRQLAQAEQIRLMTTGRLTAMQAAAQRWLDLPA 280
>gi|303326014|ref|ZP_07356457.1| glutamate racemase [Desulfovibrio sp. 3_1_syn3]
gi|302863930|gb|EFL86861.1| glutamate racemase [Desulfovibrio sp. 3_1_syn3]
Length = 276
Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 59/257 (22%), Positives = 106/257 (41%), Gaps = 4/257 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ +FDSG+GGL VL+ + +P +Y+ D PYG + + + L + L
Sbjct: 8 PVALFDSGVGGLTVLKALADRLPGEDLLYLGDTARLPYGTKGRETITRYTL-LAARKLVD 66
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
+ V+ACNTA LR F + +G V P + AA +++G I +++T AT+
Sbjct: 67 RGAKMLVVACNTATAAALPALREHFAPLPVVGVVEPGARAAARTSRNGEIVVIATEATIT 126
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE-KEGKRT 192
I + H+ + + EE + E ++ +E F R
Sbjct: 127 GGAYQQAITRIRPEAHVRGRACTLFVPMAEEGWMDGPLVEGIARRYLEDMFTPAVTAPRP 186
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-ALF 251
D ++L CTH+PL+ + + V +D++ + A L R++ +T
Sbjct: 187 DTLLLGCTHFPLLQAALQNVVGPQVRIVDSAATTAESVEEELTRLDLLRTDEHTGVRRFM 246
Query: 252 LSGKPDIAMRRLMQGFG 268
+ + R G
Sbjct: 247 TTDNRERFARTGGHFLG 263
>gi|114566002|ref|YP_753156.1| glutamate racemase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114336937|gb|ABI67785.1| glutamate racemase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 267
Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 54/260 (20%), Positives = 98/260 (37%), Gaps = 6/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I IFDSG+GGL V++ + MP+ FIY D PYGN + L + S
Sbjct: 1 MGKNEPIGIFDSGVGGLTVVKSLMEKMPDESFIYFGDTAHVPYGNKSEQQLFNYAHKIIS 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L Q ++AC T ++ + + + AA +++G I + +T
Sbjct: 61 -FLISKQVKAIIVACGTHSSVTLPSVLQEYSLPMLGVVKAGARSAARLSRNGKIGVAATQ 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ + + I ++ + VE K+ E ++ +
Sbjct: 120 ATVNKKAYTREIQELEPDFQVYETACPRFVPLVE----AGKLNNSESREAVAEYLGPLLA 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDH 248
+ D +VL CTHYP + + + ++ +D S + + + + + H
Sbjct: 176 QGIDTLVLGCTHYPFLATAISEFAGEKLELVDTSCETIDELQEIFGAQDLFNNSGKKPRH 235
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
++SG D G
Sbjct: 236 EFYVSGHDDSFFNVGRLLMG 255
>gi|254478075|ref|ZP_05091458.1| glutamate racemase [Carboxydibrachium pacificum DSM 12653]
gi|214035937|gb|EEB76628.1| glutamate racemase [Carboxydibrachium pacificum DSM 12653]
Length = 278
Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 58/270 (21%), Positives = 109/270 (40%), Gaps = 11/270 (4%)
Query: 1 MKIDNYP---CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWED 57
M+ + E I + DSG+GG+ VL+++ ++PE +IY D + PYGN
Sbjct: 1 MQKKYFKQKVVEMDKNGPIGVIDSGVGGITVLKRLLEILPEEDYIYFGDTLRVPYGNRPK 60
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
++K + + L K + VIACNT + ++ + + F IK A
Sbjct: 61 EEIEKFTREIVN-YLKKQKVKAVVIACNT---ICSSINKNDYEILMFGILEAGIKSAVEA 116
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
T +G I +++T T+ I + + L VE + I
Sbjct: 117 TSNGRIGVIATKRTVESEAYLKGIKRLNRNAMVFQKACPELVLIVE----NGFYEASSIY 172
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237
++ C E K D +VL CTH+P+++ ++ V +D + +A + L
Sbjct: 173 TAVKKCTEEFLEKDIDTLVLGCTHFPILLPFIERVVDNKVTVVDPAIKLAHEVKKYLVEN 232
Query: 238 NTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
N + + ++G+ + ++
Sbjct: 233 NLVKDKKGGQIRFLVTGEKENFIKVAGTFL 262
>gi|257468044|ref|ZP_05632140.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185]
gi|317062330|ref|ZP_07926815.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185]
gi|313688006|gb|EFS24841.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185]
Length = 263
Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 59/262 (22%), Positives = 98/262 (37%), Gaps = 9/262 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K +I +FDSG+GG VL+++ L+P + IY D+ PYG ++ + +
Sbjct: 1 MKKNYNIGVFDSGVGGTTVLKRIIELLPNENIIYYGDNGNAPYGEKTIKEIQGFCLDIMD 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ VIACNTA + ++ + P K A + + I +LSTP
Sbjct: 61 FFMMN-NCKAVVIACNTATAASLELIKEKYTVPVIGVISPGAKSAVEASTNKCIGVLSTP 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T ++ I Y ++ L +E + +E IK I
Sbjct: 120 FTAASNAYADEIAKYSKTAKVYQEGCPELCPMIEAGWETFEDRETIIKNHISKF-----P 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDH 248
+ D +VL CTHYP+ + + +D + + L N
Sbjct: 175 RNVDTVVLGCTHYPIAREDIARNFCGNI--VDPARETSVALYNTLKNSNLLSDSDTKGKI 232
Query: 249 ALFLSGKPDIAMRRLMQGFGLK 270
F+SG D + Q G +
Sbjct: 233 DFFVSGDKDKFRKVAEQFLGFE 254
>gi|239787442|emb|CAX83914.1| Glutamate racemase [uncultured bacterium]
Length = 277
Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 56/263 (21%), Positives = 104/263 (39%), Gaps = 13/263 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL VL+ + P FIY+ D PYG +++ + + L
Sbjct: 7 SRPIGIFDSGVGGLTVLKALVSRFPHERFIYLGDTARVPYGTKSARTVERYSIQVAD-CL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK----QAAAYTQSGLISILST 128
V+ACNTA L + L+S P+ P + AA + G + ++ T
Sbjct: 66 LARGVKGLVVACNTASALGMEALKSHSPTPILGVIEPGCRAAGALAAGLGRPGKVGVIGT 125
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
+T+ + + ++ + VE +++ ++ +E
Sbjct: 126 RSTVASGAYPAQLSRLDPGIEVFSLACPLFVPLVE----EGWLEQPAVRLIVEESLSPFL 181
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
+R D ++L CTHYPL+ V ++ V +D++ ++A L R+ V +
Sbjct: 182 DQRLDALILGCTHYPLLAPVIAEVMGSAVPLVDSATAVADELERYLVRVIAPAPAVPEAT 241
Query: 249 ----ALFLSGKPDIAMRRLMQGF 267
++ D ++
Sbjct: 242 GARLHFLVTDVADRFKEMAVRFI 264
>gi|90420932|ref|ZP_01228837.1| glutamate racemase [Aurantimonas manganoxydans SI85-9A1]
gi|90334907|gb|EAS48679.1| glutamate racemase [Aurantimonas manganoxydans SI85-9A1]
Length = 268
Score = 224 bits (570), Expect = 2e-56, Method: Composition-based stats.
Identities = 130/264 (49%), Positives = 182/264 (68%), Gaps = 7/264 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL+++R MP+ FIYVADD GFPYG+WE+ L R++ LF+++
Sbjct: 1 MNAPILVFDSGIGGLTVLRELRTAMPDRRFIYVADDAGFPYGDWEEEPLVARILDLFAEL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+D Y+P L+VIACNTA TL+ +LR+ F ++ F+G VPAIK A T+SGL+S+L+TP T
Sbjct: 61 IDTYEPSLAVIACNTASTLVLPQLRARF-AIPFVGTVPAIKPATERTRSGLVSVLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC-----GIKIKEDEIKKEIEGCFIE 186
+RR YT +L+ ++ + C + LV S LA E G + +D + EI CF+E
Sbjct: 120 VRRVYTRDLVEAFATHCEVRLVGSPELARLAERSLLDSEASGDQELDDAMAAEIAPCFVE 179
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
G+RTD++VLACTHYPLI + FR+L+PWPVDWLD +++IARRAR L + + +
Sbjct: 180 AGGQRTDIVVLACTHYPLIANHFRRLAPWPVDWLDPAEAIARRARS-LCKPGSGELPEGF 238
Query: 247 DHALFLSGKPDIAMRRLMQGFGLK 270
D A F G P MRRL++GFGL+
Sbjct: 239 DSAHFTGGAPGYQMRRLVRGFGLE 262
>gi|197248641|ref|YP_002149052.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197212344|gb|ACH49741.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
Length = 260
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 83/255 (32%), Positives = 137/255 (53%), Gaps = 4/255 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 2 LVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R Y
Sbjct: 62 LSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRPY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S L E G + +E+++ + E D +V
Sbjct: 121 THELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEPP--DTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSTDANIAYCMAMTP 238
Query: 257 -DIAMRRLMQGFGLK 270
+ ++Q +G +
Sbjct: 239 GAEQLLPVLQRYGFE 253
>gi|228926020|ref|ZP_04089101.1| Glutamate racemase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|228833732|gb|EEM79288.1| Glutamate racemase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
Length = 265
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 49/253 (19%), Positives = 97/253 (38%), Gaps = 5/253 (1%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+ DSG+GGL V ++ +P+ Y+ D+ PYG ++ + + L ++
Sbjct: 1 MLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFVFEMVE-FLKQFPL 59
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
V+ACNTA L+ P + A T+ G I ++ T T++
Sbjct: 60 KALVVACNTAAAATLAALQEALSIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIQSNMY 119
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+H + +H + LA+ VE + ++++ + + D ++L
Sbjct: 120 EKALHELDTYLKVHSHACPNLATVVE----NRLEDTAYVTQQVKQALLPLTKEDIDTLIL 175
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257
CTHYPL+ ++ V + +++ A +L + H F +G
Sbjct: 176 GCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFTTGSVS 235
Query: 258 IAMRRLMQGFGLK 270
+ G +
Sbjct: 236 SFEHIAERWLGYQ 248
>gi|300768032|ref|ZP_07077938.1| glutamate racemase [Lactobacillus plantarum subsp. plantarum ATCC
14917]
gi|300494381|gb|EFK29543.1| glutamate racemase [Lactobacillus plantarum subsp. plantarum ATCC
14917]
Length = 279
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 52/261 (19%), Positives = 95/261 (36%), Gaps = 7/261 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+++I DSG+GGL V+++ +P ++ D PYG ++ F +
Sbjct: 7 MANEHAIGFMDSGVGGLTVVKQALKQLPRETVYFIGDQARLPYGPRPAEQVRTFS-FQMA 65
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
D L Q + VIACNTA LR P + A + I +++T
Sbjct: 66 DFLMAKQIKMLVIACNTATAAALPALRQQLSIPVIGVIAPGSRAALKASHRNRIGVIATE 125
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+R + I + + + VE + K+ + + +
Sbjct: 126 GTIRSNAYRDAILTKDPTATVVSQACPKFVPLVESNEYQSTV----AKRVVAETLKQLKK 181
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH- 248
+ D +VL CTHYPL+ + + + V +D+ +L ++ R +
Sbjct: 182 QDVDTLVLGCTHYPLLRPLIQNVMGPGVTLIDSGAETVNDVSAVLDYLDIANDRSTKRYP 241
Query: 249 -ALFLSGKPDIAMRRLMQGFG 268
+ +G D G
Sbjct: 242 DEYYTTGAADQFEAIARNWLG 262
>gi|113968524|ref|YP_732317.1| glutamate racemase [Shewanella sp. MR-4]
gi|122944227|sp|Q0HNV7|MURI_SHESM RecName: Full=Glutamate racemase
gi|113883208|gb|ABI37260.1| glutamate racemase [Shewanella sp. MR-4]
Length = 272
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 80/266 (30%), Positives = 132/266 (49%), Gaps = 11/266 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL ++R L+P + + Y+ D+ PYG E+ L + L +
Sbjct: 1 MSQPILVFDSGIGGLSVLAEIRKLLPHHDYCYLFDNARLPYGELEEQELVSGCVALIDQV 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+++ + V+ACNTA T++ LR+T S+ +G VPAIK AA ++S I +L+TP T
Sbjct: 61 VERTHAAIVVVACNTASTVVLPALRATL-SIPVVGVVPAIKPAAQLSKSKRIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT LI + CH+ L S L E+ ++ +
Sbjct: 120 VKRHYTYELISQFADDCHVELFGSSELVLMAEQKIATGQLD----MARLTQVLSPIVTAD 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA-- 249
DV+VL CTH+P++ +Q+ V LD+ ++IA+R + LL + Q D +
Sbjct: 176 LDVLVLGCTHFPMLRDELQQVLGKGVTLLDSGEAIAKRVKTLLAETKSEQQVQEDANRDS 235
Query: 250 ----LFLSGKPDIAMRRLMQGFGLKS 271
+ K + ++ G +
Sbjct: 236 VMQAFYTKAKISEGLVSMLVDCGFST 261
>gi|328462612|gb|EGF34566.1| glutamate racemase [Lactobacillus helveticus MTCC 5463]
Length = 266
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 52/257 (20%), Positives = 99/257 (38%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I + DSG+GG V++ + +P +++ D PYG+ + + L
Sbjct: 3 NRPIGLLDSGVGGFTVVK-VIEKLPHESTVFIGDSANMPYGDKSREQIIELTRRSV-KFL 60
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + L + ACNTA + L++ AA T++ +++ +TP T+
Sbjct: 61 LQKKVKLIIFACNTATAVAMPTLQNEVEQQIIGVIQSGSLAAARTTKNKKVAVAATPVTI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + V++ LA +E + D ++ + +
Sbjct: 121 NSHAYQKEIKFRDPDIKVMEVAAPELAPLIE-----SQKDYDTNLAAVKRSIAPLKDQDF 175
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALF 251
D VL CTHYPLI + F + + +D +D +A+ ++ R + H +
Sbjct: 176 DTFVLGCTHYPLIQNEFVEALGDKIQIVDPADQVAQYTFNVMRRDGLFSSFDQAGKHEYY 235
Query: 252 LSGKPDIAMRRLMQGFG 268
+G PD + G
Sbjct: 236 TTGDPDKFSEMGRRFLG 252
>gi|264677499|ref|YP_003277405.1| glutamate racemase [Comamonas testosteroni CNB-2]
gi|262208011|gb|ACY32109.1| glutamate racemase [Comamonas testosteroni CNB-2]
Length = 298
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 70/271 (25%), Positives = 118/271 (43%), Gaps = 17/271 (6%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFSDIL 72
+ I IFDSG+GGL VLQ +R +P F+Y+AD PYG+ D +++R + + +L
Sbjct: 6 SPIGIFDSGVGGLSVLQALRHELPHEQFVYLADSGNAPYGDARGDAFVQERSLAIAKYLL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+++ + VIACNTA + LR P + +G PAIK A+ +Q+ + +++T T+
Sbjct: 66 EQHDIKILVIACNTATAAAVELLRERLPQLPVIGVEPAIKPASFSSQTHHVGVMATRGTI 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEE---YACGIKIKEDEIKKEIEGCFIE--- 186
+ L+ + + HL + LA +E+ A EI+
Sbjct: 126 SSQRVARLVSEHGQRAEFHLQACDGLARAIEQSTEQALPEDASATEIRALCAKYTSALGS 185
Query: 187 --KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
+ + D +VL CTHY + R L + LD +AR+ R +L + N
Sbjct: 186 FGLKTGQMDTLVLGCTHYVFVKDDLRALLGPDIQLLDTGAPVARQTRRMLEQRNLLGAET 245
Query: 245 FDD--------HALFLSGKPDIAMRRLMQGF 267
L +G+ +
Sbjct: 246 DGSLQLAQADQIQLMTTGRLTAMQAAAQRWL 276
>gi|260557842|ref|ZP_05830055.1| glutamate racemase [Acinetobacter baumannii ATCC 19606]
gi|260408633|gb|EEX01938.1| glutamate racemase [Acinetobacter baumannii ATCC 19606]
Length = 266
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 66/266 (24%), Positives = 125/266 (46%), Gaps = 10/266 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
N I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+
Sbjct: 3 NNNNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLISN 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNT + + +R+ ++ + PA+K A A TQS I++L+T
Sbjct: 63 LVAQGKCKAIVIACNTMTAVAIETIRAQI-NVPLIAIEPAVKPAVAITQSKHIAVLATAT 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ +LI Y + LV + LA ++E E+K ++ +
Sbjct: 122 TVKGKNLKSLIEMYAQDIKVSLVPCIGLAEKIETGKA----HTAEVKDYLKNILAPLVEQ 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHA 249
+ D I+L CTHYP + +++ + ++ S+++ + L + + ++ +H
Sbjct: 178 KVDTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLSSESPNEGNHI 237
Query: 250 LFLSGKP----DIAMRRLMQGFGLKS 271
++ S P D+ L + +K+
Sbjct: 238 IWTSSDPLEVADVTFSLLSEKLSVKA 263
>gi|300172982|ref|YP_003772148.1| glutamate racemase/Nucleoside-triphosphatase [Leuconostoc
gasicomitatum LMG 18811]
gi|299887361|emb|CBL91329.1| Glutamate racemase/Nucleoside-triphosphatase [Leuconostoc
gasicomitatum LMG 18811]
Length = 486
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 50/262 (19%), Positives = 92/262 (35%), Gaps = 8/262 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
N I + DSG+GGL V+++ + +P FI++ D PYG + + +
Sbjct: 1 MNKNNPIGMIDSGVGGLTVIKEAQKQLPNEQFIFIGDTARMPYGPRTTDEVIAYTFQMAN 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
++ + Q + VIACNTA L+ P + A T++ I I++T
Sbjct: 61 YLITEKQIKMLVIACNTATACALTVLQKKLTIPVIGVIQPGAQAAQLATKNKTIGIIATD 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ IH Y + + VE D + +
Sbjct: 121 GTVNSKAYELQIHQYGADTKVLSQGEPDFVQLVEANKYQDHATRDIVMNH----LAPFKA 176
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDD 247
D ++L CTH+PL+ R+ + +D+ + L ++ + D+
Sbjct: 177 AGIDTLILGCTHFPLLEPFIREAVGKQITLIDSGRETIYAIKQCLNKLALNSDIKHNHDE 236
Query: 248 HALFLSGKPD--IAMRRLMQGF 267
+ + D
Sbjct: 237 DIYYTTSDSDDETFKVIATNWL 258
>gi|222837977|gb|EEE76342.1| predicted protein [Populus trichocarpa]
Length = 602
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 15/273 (5%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFSDIL 72
+ I +FDSGIGGL VLQ +R +P F+Y+AD PYG+ D +++R + +
Sbjct: 312 SPIGVFDSGIGGLSVLQALRHELPHERFVYLADSGNAPYGDARGDAFVQQRTRTIARHLR 371
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+++Q + VIACNTA D LR+ P + +G PAIK A+ +Q+G + +++T T+
Sbjct: 372 EQHQIKVLVIACNTATAAAVDMLRAEMPELPLIGVEPAIKPASLSSQTGHVGVMATRGTV 431
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED---EIKKEIEGCFIEK-- 187
+ L+ + + H+ LA +EE + E+ +
Sbjct: 432 SSARFARLVAEHGQRVQFHVQPCDGLAKAIEESTEQPVPADPMATEVAQLCARYVNALGS 491
Query: 188 ---EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
+ D +VL CTHY R L + ++D +AR+ R +L R+ T +
Sbjct: 492 FGQKTGEMDSLVLGCTHYIFAREQLRTLLGPDIQFIDTGAPVARQTRRVLDRLGTLASES 551
Query: 245 ------FDDHALFLSGKPDIAMRRLMQGFGLKS 271
L +G + L +
Sbjct: 552 GPLPAAEGQVQLMTTGSLQALQSAASRWLDLPA 584
>gi|187923408|ref|YP_001895050.1| glutamate racemase [Burkholderia phytofirmans PsJN]
gi|187714602|gb|ACD15826.1| glutamate racemase [Burkholderia phytofirmans PsJN]
Length = 284
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 67/256 (26%), Positives = 107/256 (41%), Gaps = 9/256 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ IFDSG+GGL VL+ +R +P+ +YVAD + PYG +D + R + + + L K
Sbjct: 11 PVGIFDSGLGGLSVLRAVRAQLPDEAILYVADSLYAPYGERDDDFIADRTLAI-GEWLVK 69
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA +R P + +G P +K AA +++ + +L+T TLR
Sbjct: 70 QGAKALVVACNTATAQSIALVREKLP-IPLVGVEPGVKPAALQSKTRVAGVLATQVTLRS 128
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
L+ Y + C L VE G E++ + G D
Sbjct: 129 ARFQALLERYAADCRFLCQPGHGLVQAVERCDVG----SAELRALLRGYLQPMLDAGADT 184
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH---ALF 251
+VL CTHYP + R + + +D S +IAR+ +L + F
Sbjct: 185 LVLGCTHYPFLDAAIRDIVGDRLMLIDTSIAIARQLERVLDQHGLRAVPPSAATVSPRFF 244
Query: 252 LSGKPDIAMRRLMQGF 267
+G +
Sbjct: 245 STGDGTHQQQLAATLL 260
>gi|51244544|ref|YP_064428.1| glutamate racemase [Desulfotalea psychrophila LSv54]
gi|50875581|emb|CAG35421.1| probable glutamate racemase [Desulfotalea psychrophila LSv54]
Length = 295
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 67/260 (25%), Positives = 109/260 (41%), Gaps = 7/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K + I IFDSG+GGL V K++ L+P IY AD PYG ++ R + +
Sbjct: 19 MKAKKPIGIFDSGVGGLSVALKIKELLPREDLIYFADTGFSPYGTKPAELIRSRAKHITA 78
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L K V+ACNTA LR+ ++ +G P I+ A ++SG+I +L+T
Sbjct: 79 -FLIKKGCKAIVVACNTATANAIAYLRA-TSNIPIIGVEPGIRPAVQQSKSGIIGVLATR 136
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
TL+ + L + + I + + L VE + +E + IEG
Sbjct: 137 QTLKSSSFQTLKKRFAGKSQIEIQACPRLVELVE----AGNLTGNETTEAIEGYVEPLLR 192
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDH 248
D IVL CTHY + +++ +D S + + + L +
Sbjct: 193 AGADYIVLGCTHYLFLAPSIKKIISGRAQLIDTSVPVTQELKKQLAISSLLSPTKRDGRT 252
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+ SG ++ Q +G
Sbjct: 253 EFWTSGNQTEVTAQISQLWG 272
>gi|228944589|ref|ZP_04106959.1| Glutamate racemase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|229120481|ref|ZP_04249728.1| Glutamate racemase [Bacillus cereus 95/8201]
gi|228663066|gb|EEL18659.1| Glutamate racemase [Bacillus cereus 95/8201]
gi|228815049|gb|EEM61300.1| Glutamate racemase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
Length = 265
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 49/253 (19%), Positives = 97/253 (38%), Gaps = 5/253 (1%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+ DSG+GGL V ++ +P+ Y+ D+ PYG ++ + + L ++
Sbjct: 1 MLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFVFEMVE-FLKQFPL 59
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
V+ACNTA L+ P + A T+ G I ++ T T++
Sbjct: 60 KALVVACNTAAAATLAALQEALSIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIQSNMY 119
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+H + +H + LA+ VE + ++++ + + D ++L
Sbjct: 120 EKALHELDTYLKVHSHACPTLATVVE----NRLEDTAYVTQQVKQALLPLTKEDIDTLIL 175
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257
CTHYPL+ ++ V + +++ A +L + H F +G
Sbjct: 176 GCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFTTGSVS 235
Query: 258 IAMRRLMQGFGLK 270
+ G +
Sbjct: 236 SFEHIAERWLGYQ 248
>gi|229815852|ref|ZP_04446176.1| hypothetical protein COLINT_02906 [Collinsella intestinalis DSM
13280]
gi|229808547|gb|EEP44325.1| hypothetical protein COLINT_02906 [Collinsella intestinalis DSM
13280]
Length = 297
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 57/272 (20%), Positives = 100/272 (36%), Gaps = 17/272 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL V + + +P YV D PYG + ++ ++ L
Sbjct: 10 ERPIGVFDSGLGGLTVARCIATSLPHESIYYVGDTKRCPYGVRPEEEVRSFVLQ-AGRWL 68
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+++ + VIACNTA + P P + A T++ + +L+TP T+
Sbjct: 69 AEHEVKIMVIACNTATAAGLRIAQQVLPVPVIGVIAPGARAAINSTRTRKVGVLATPLTV 128
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC------------GIKIKEDEIKKEI 180
R + I + ++ + VE G E + E+
Sbjct: 129 RTGAYTRAIQDLDAGVDVYGCPAPSFVEIVEHELATGAHLQERWLQNGDIFDTLENRVEV 188
Query: 181 EGCFIEKE--GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
E G + D +VL CTH+PL+ R V + +++ R +L R +
Sbjct: 189 ERTLAPIISGGAQVDTVVLGCTHFPLLAGPIRHALGPDVRVVSSAEETTRELEDILSRRD 248
Query: 239 THQTRV-FDDHALFLSGKP-DIAMRRLMQGFG 268
+ +H + FG
Sbjct: 249 LLAPQTAQPEHRFATTSDNIAEFAAAGSFIFG 280
>gi|28378862|ref|NP_785754.1| glutamate racemase [Lactobacillus plantarum WCFS1]
gi|254557068|ref|YP_003063485.1| glutamate racemase [Lactobacillus plantarum JDM1]
gi|38258032|sp|Q88V19|MURI_LACPL RecName: Full=Glutamate racemase
gi|28271699|emb|CAD64605.1| glutamate racemase [Lactobacillus plantarum WCFS1]
gi|254045995|gb|ACT62788.1| glutamate racemase [Lactobacillus plantarum JDM1]
Length = 273
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 52/261 (19%), Positives = 95/261 (36%), Gaps = 7/261 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+++I DSG+GGL V+++ +P ++ D PYG ++ F +
Sbjct: 1 MANEHAIGFMDSGVGGLTVVKQALKQLPRETVYFIGDQARLPYGPRPAEQVRTFS-FQMA 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
D L Q + VIACNTA LR P + A + I +++T
Sbjct: 60 DFLMAKQIKMLVIACNTATAAALPALRQQLSIPVIGVIAPGSRAALKASHRNRIGVIATE 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+R + I + + + VE + K+ + + +
Sbjct: 120 GTIRSNAYRDAILTKDPTATVVSQACPKFVPLVESNEYQSTV----AKRVVAETLKQLKK 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH- 248
+ D +VL CTHYPL+ + + + V +D+ +L ++ R +
Sbjct: 176 QDVDTLVLGCTHYPLLRPLIQNVMGPGVTLIDSGAETVNDVSAVLDYLDIANDRSTKRYP 235
Query: 249 -ALFLSGKPDIAMRRLMQGFG 268
+ +G D G
Sbjct: 236 DEYYTTGAADQFEAIARNWLG 256
>gi|194335598|ref|YP_002017392.1| glutamate racemase [Pelodictyon phaeoclathratiforme BU-1]
gi|194308075|gb|ACF42775.1| glutamate racemase [Pelodictyon phaeoclathratiforme BU-1]
Length = 273
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 61/258 (23%), Positives = 109/258 (42%), Gaps = 7/258 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I IFDSGIGGL V++ ++ +P +Y D PYG ++K + +L
Sbjct: 10 EAPIGIFDSGIGGLTVVKAVQAALPFERILYFGDTARVPYGPKSQVTIRKYAADDTA-ML 68
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+YQP + ++ACNT L D ++ + + G + A + A T++ I ++ T AT
Sbjct: 69 MRYQPKIIIVACNTVSALALDVVQKSCGVIPVTGVLRAGARLATEVTRNNRIGVIGTRAT 128
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ I+ + S+ + + + E I + E E +
Sbjct: 129 VSSNAYGIAINEFNSEIEVVSRACPLFVPLAE----EGFIDHLATRLIAEEYLAEITREG 184
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHAL 250
D +VL CTHYP++ V ++ + +D+++++A R R LL + L
Sbjct: 185 IDTLVLGCTHYPILRKVIEEIVGPEIRIIDSAEAVALRTRELLEESGHLSSSLKVSAPHL 244
Query: 251 FLSGKPDIAMRRLMQGFG 268
+S P G
Sbjct: 245 LVSDLPQKFSMLYQLFMG 262
>gi|237755668|ref|ZP_04584279.1| glutamate racemase [Sulfurihydrogenibium yellowstonense SS-5]
gi|237692180|gb|EEP61177.1| glutamate racemase [Sulfurihydrogenibium yellowstonense SS-5]
Length = 260
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 55/248 (22%), Positives = 100/248 (40%), Gaps = 10/248 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSGIGGL V +++ P+ Y+ D PYGN + + + S +
Sbjct: 2 PIGVFDSGIGGLTVFKEIAASFPKVDLYYLGDTARVPYGNKSKTTIIRYSVECASYLYHN 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
Y VIACNTA + D LR P P + A +++ I ++ T AT++
Sbjct: 62 YNVDAIVIACNTASSYALDTLREILPIPVIGVVQPGAESAVKVSKNKKIGVIGTSATIKS 121
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ S ++ + + VE I + K ++ + D
Sbjct: 122 NSYLETLKSLDKDLEVYQKACPLFVPLVE----EGWIDNEVAKLTVKEYLDDLVKTGIDT 177
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
++L CTHYPL+ + + L P ++ +D+S +I + + +F++
Sbjct: 178 LILGCTHYPLLKNTIKGLYP-HLNIVDSSVAIVEHLKNI-----KLNIEETGKRKIFITD 231
Query: 255 KPDIAMRR 262
+ +
Sbjct: 232 ESHAFDKL 239
>gi|184159912|ref|YP_001848251.1| glutamate racemase [Acinetobacter baumannii ACICU]
gi|183211506|gb|ACC58904.1| Glutamate racemase [Acinetobacter baumannii ACICU]
gi|322509829|gb|ADX05283.1| Glutamate racemase [Acinetobacter baumannii 1656-2]
Length = 266
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 66/266 (24%), Positives = 126/266 (47%), Gaps = 10/266 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
N I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+
Sbjct: 3 NNNNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLISN 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNT + + +R+ ++ + PA+K A A TQS I++L+T
Sbjct: 63 LVAQGKCKAIVIACNTMTAVAIETIRAQI-NVPLIAIEPAVKPAVAITQSKHIAVLATAT 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ +LI +Y + LV + LA ++E E+K ++ +
Sbjct: 122 TVKGKNLKSLIETYAQDIKVSLVPCIGLAEKIETGKA----HTAEVKDYLKNILAPLVEQ 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHA 249
+ D I+L CTHYP + +++ + ++ S+++ + L + + ++ +H
Sbjct: 178 KVDTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLSSESPNEGNHI 237
Query: 250 LFLSGKP----DIAMRRLMQGFGLKS 271
++ S P D+ L + +K+
Sbjct: 238 IWTSSDPLEVADVTFSLLSEKLSVKA 263
>gi|261879009|ref|ZP_06005436.1| glutamate racemase [Prevotella bergensis DSM 17361]
gi|270334393|gb|EFA45179.1| glutamate racemase [Prevotella bergensis DSM 17361]
Length = 281
Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats.
Identities = 59/263 (22%), Positives = 106/263 (40%), Gaps = 11/263 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q +I +FDSG GGL +L +R L+P+Y +IY+ D+ PYG + + + L
Sbjct: 10 QGAIGVFDSGYGGLTILHGIRRLLPQYDYIYLGDNARAPYGPRSFDVVYEFTRQSVAK-L 68
Query: 73 DKYQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126
L +I CNTA + +++L P LG + P + T++ + +L
Sbjct: 69 FAMGCQLVIIGCNTASAKALRSIQQNDLPQWDPDRRVLGIIRPTAEVIGQLTRNNHVGLL 128
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T T++ + I Q + + VE + +KK I+
Sbjct: 129 ATEGTVKSQSYNMEIAKLWPQIQVTGQACPFWVLLVEYNEADSPGADYFVKKRIDQLMQ- 187
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-- 244
D I+L CTH+PL++ ++ V + D +A+ + L R + R+
Sbjct: 188 -LDPDIDTIILGCTHFPLLMPKIQKYVKPNVRIVPQGDYVAKSLKAYLERHQDMEARLTR 246
Query: 245 FDDHALFLSGKPDIAMRRLMQGF 267
+ F + P+
Sbjct: 247 HGTVSYFTTENPEKFKESATIFL 269
>gi|329666855|gb|AEB92803.1| glutamate racemase [Lactobacillus johnsonii DPC 6026]
Length = 266
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 52/256 (20%), Positives = 90/256 (35%), Gaps = 7/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I + DSG+GGL VL+K+ MP I++ D PYG+ + + L
Sbjct: 3 NRPIGVLDSGLGGLTVLKKVIEKMPNESTIFIGDQANMPYGDRSREEIISLTRDSVN-FL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + CNTA + ++ P AA T++ ++++ T AT+
Sbjct: 62 LSKDVKIIIFGCNTATAVAMATIQKEIPLQIIGVVQSGALAAARTTETKNVAVIGTKATV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + + + LA E ED + +
Sbjct: 122 ASHSYLKEIQYRDPEIKVSEFAQPKLAPLAE-----EDPDEDTKSAVVSESLTPLKNADY 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALF 251
D +VL CTHYPL+ + +D +D +A+ +L R + H +
Sbjct: 177 DTLVLGCTHYPLLRDEIVAVVGQDKKIVDPADQVAQYTYNVLRRDDLFAESTDPVKHDYY 236
Query: 252 LSGKPDIAMRRLMQGF 267
+G+ Q
Sbjct: 237 TTGEAKKFTEITRQWM 252
>gi|227495766|ref|ZP_03926077.1| glutamate racemase [Actinomyces urogenitalis DSM 15434]
gi|226834695|gb|EEH67078.1| glutamate racemase [Actinomyces urogenitalis DSM 15434]
Length = 288
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 51/263 (19%), Positives = 97/263 (36%), Gaps = 12/263 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I +FDSG+GGL V + + +P +Y+ D PYG +++ + + +
Sbjct: 10 NDAPIGMFDSGVGGLTVARAVLDQLPGEQVLYIGDTEHSPYGPRPIDEVRELALAVMDE- 68
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFP----SMAFLGAVPAIKQAAAYTQSGLISILS 127
L + VIACNTA + + R + PA + AA T++G I +++
Sbjct: 69 LVDSGVKMLVIACNTASAAVLHDARRRYTLGKGVPVVEVIHPAARAAARVTRNGRIGLIA 128
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+ ++ + + + + E ++ E +
Sbjct: 129 TQGTVDSRAYADALEAV-PGVELLSTACPDFVELAERGVT----TGPQVMSRAEEYLLPL 183
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245
D ++L CTHYPL++ + V + +S+ A+ L +
Sbjct: 184 REAGVDTLILGCTHYPLLIGPISYVMGEDVTLVTSSEETAKDVYRGLASQGLLRDPDAPA 243
Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268
H +G P+ + G
Sbjct: 244 PVHEFRATGDPESFAVLARRFLG 266
>gi|262374074|ref|ZP_06067351.1| glutamate racemase [Acinetobacter junii SH205]
gi|262311085|gb|EEY92172.1| glutamate racemase [Acinetobacter junii SH205]
Length = 290
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 67/261 (25%), Positives = 118/261 (45%), Gaps = 11/261 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSGIGGL + Q++ +P +Y AD PYG D +++ L
Sbjct: 20 DAPIGVFDSGIGGLSIAQEIASHLPNERILYYADTAHVPYGARSDQEIRELTAKAIE-WL 78
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ ++V+ACNTA D LR + +G VPA+K A TQS ++++L+TPAT
Sbjct: 79 YRQGCKIAVVACNTASAFSLDYLREHYGEHFPIVGLVPALKPAVLQTQSKVVAVLATPAT 138
Query: 132 LRRTYTSNLIHSYVS--QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
R ++ + + V+S+ L VE + E+
Sbjct: 139 FRGKLIKEVMLKFAEPAGVKVLTVTSLKLVPFVEAGEQ----MSEACLVELHNILQPVVD 194
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-- 247
+ D +VL CTHYP + RQ+ + +D+ ++AR+ +L + ++ +
Sbjct: 195 QGADFLVLGCTHYPFLKDAIRQIFNEKLKLIDSGQAVARQTAYILIKNRLLCDKISHNIT 254
Query: 248 -HALFLSGKPDIAMRRLMQGF 267
F+SG+ + ++ ++Q
Sbjct: 255 RIECFVSGQNAVELQPVVQHL 275
>gi|255067504|ref|ZP_05319359.1| glutamate racemase [Neisseria sicca ATCC 29256]
gi|255048299|gb|EET43763.1| glutamate racemase [Neisseria sicca ATCC 29256]
Length = 269
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 56/260 (21%), Positives = 102/260 (39%), Gaps = 8/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL ++ + +P + IY D PYG ++ M + L
Sbjct: 6 QRPIGVFDSGVGGLTNVRALMERLPMENIIYFGDTARVPYGTKSRATIETFAMQIVD-FL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ VIACNT + ++R +M L + A + A T + I I++T T
Sbjct: 65 LENDVKALVIACNTIAAVAGQKIRQKAGNMPVLDVISAGAQAALNTTSNNKIGIIATNTT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH+ + ++ +L VE + + + +
Sbjct: 125 VNSNAYARAIHAQNPDTLVRTQATPLLVPLVE----EGWLDHEVTRLTVREYLKPLLVDD 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + + + V +D++ + A L + T D+
Sbjct: 181 IDTLVLGCTHFPLLKPLIGKEA-QNVALVDSAITTAEATAQALAQAGLLNTENDSPDYRF 239
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
++S P + G
Sbjct: 240 YVSDIPLRFRTIGERFLGRS 259
>gi|218782867|ref|YP_002434185.1| glutamate racemase [Desulfatibacillum alkenivorans AK-01]
gi|218764251|gb|ACL06717.1| glutamate racemase [Desulfatibacillum alkenivorans AK-01]
Length = 264
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 55/251 (21%), Positives = 98/251 (39%), Gaps = 7/251 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGGL V + + L P + Y D PYG + + + + L
Sbjct: 2 IGIFDSGIGGLTVARAVMELFPHLNICYFGDTARTPYGTKSKDTVTRYAVEN-TRFLLDQ 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA + LR F F PA+ A + ++ I ++ T T+
Sbjct: 61 GAKIIVVACNTASAVAVPTLRERFDVPIFEVISPAVDMALSLAKAKRIGVIGTRGTINSG 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
LI + + +L S VE +K+ E + ++ + ++ +
Sbjct: 121 IYERLIKERDPERKVFSEPCPLLVSLVE----EGWLKKPETRMIVKKYLHPLKAQQIQSL 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHALFLS 253
+L CTHYP+I + + V +D+S++++ + L + +S
Sbjct: 177 ILGCTHYPIIKQLIARKIGKRVKIVDSSEAVSVSLKRYLDDNPRVMDGLSKGGESVFHVS 236
Query: 254 GKPDIAMRRLM 264
+
Sbjct: 237 DVTAQFAKTAQ 247
>gi|219850108|ref|YP_002464541.1| glutamate racemase [Chloroflexus aggregans DSM 9485]
gi|219544367|gb|ACL26105.1| glutamate racemase [Chloroflexus aggregans DSM 9485]
Length = 266
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 68/253 (26%), Positives = 116/253 (45%), Gaps = 10/253 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + +P +Y+AD PYG ++ R + L +
Sbjct: 2 IGIFDSGLGGLTVTRAIHERLPTADLLYLADSAYCPYGPRPVEEIRARALA-CGQWLVEQ 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA + LRST P + +G P +K A A T+ G +++++T TL
Sbjct: 61 GAQIVVVACNTATAAAIEVLRSTLP-VPVVGMEPGVKPAVAATRRGKVAVMATSGTLASD 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
LI++Y ++ ++ ++ L +VE A + + I + VI
Sbjct: 120 RFRALINAYAAEVEVYALACPDLVEQVEAGAIADEYTKTLIANHLAAAADAD------VI 173
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+P + + R + V +D ++A + + RI R F +G
Sbjct: 174 VLGCTHFPPLTPLIRACAGPEVTIIDTGPAVAAQTARIAERIGL--PRGEGTLRCFTTGD 231
Query: 256 PDIAMRRLMQGFG 268
P+ + L+ +G
Sbjct: 232 PEAIAQALVHVWG 244
>gi|121595188|ref|YP_987084.1| glutamate racemase [Acidovorax sp. JS42]
gi|120607268|gb|ABM43008.1| glutamate racemase [Acidovorax sp. JS42]
Length = 291
Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats.
Identities = 68/276 (24%), Positives = 118/276 (42%), Gaps = 19/276 (6%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFSDIL 72
I +FDSGIGGL VLQ +R +P HF+Y+AD PYG+ D +++R + + +
Sbjct: 8 RPIGVFDSGIGGLSVLQALRHELPHEHFVYLADSGNAPYGDAKGDAFVQQRTLAIARWLR 67
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + V+ACNTA ++LR+ P + +G PA+K AAA +Q+ + +L+T T+
Sbjct: 68 EHHGIKALVVACNTATAAAVEQLRAALPDLPAIGVEPALKPAAASSQTHHVGVLATRGTV 127
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE------ 186
L + + + LA +E+ + + +IE ++
Sbjct: 128 GSARFQRLRDGHSAGTRFSVQPCDGLARAIEQ-STEEPLPAAASMAKIEALCVQYTGALG 186
Query: 187 ---KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
+ D +VL CTHY + R L V +D +AR+ R +L +
Sbjct: 187 TFGLKTGEIDTLVLGCTHYVFAKDMLRALVGPDVQIIDTGAPVARQTRRILDQAGALAPE 246
Query: 244 --------VFDDHALFLSGKPDIAMRRLMQGFGLKS 271
L+ +G+ + L +
Sbjct: 247 HAADGAPAAPGHIQLYTTGQLAALQSAAERWLQLPA 282
>gi|307246771|ref|ZP_07528839.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 1 str.
4074]
gi|307255755|ref|ZP_07537558.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|307260207|ref|ZP_07541916.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 11 str.
56153]
gi|306852346|gb|EFM84583.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 1 str.
4074]
gi|306861315|gb|EFM93306.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|306865752|gb|EFM97631.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 11 str.
56153]
Length = 267
Score = 223 bits (568), Expect = 3e-56, Method: Composition-based stats.
Identities = 78/261 (29%), Positives = 133/261 (50%), Gaps = 6/261 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +IL++DSG+GGL + +R +P H++Y D+ FPY ++ L ++ + + I
Sbjct: 1 MKPTILLYDSGMGGLTIYDAIRQTLPNAHYLYCFDNAYFPYSERSENVLIEQAIKIVQKI 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+KY + V+ACNTA T++ LR F + +G VPAIK AAA +Q+ I +L+T T
Sbjct: 61 AEKYPLDMVVVACNTASTVVLPALREKF-AFPIVGTVPAIKPAAAISQTKTIGLLATKGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R Y + LI Y C + + + L VEE + +D + K +
Sbjct: 120 VERPYVAELIEKYAKDCIVEKIGTTTLVELVEEKIRTGNVDQDRLSKVVAEWQTH---PT 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTH+PL+ +QL P ++D + IA R LL + + ++ F
Sbjct: 177 LDTVILGCTHFPLVKQELQQLLPKVKFFIDPGNGIANRVATLLSEFSLENSAQNKENIAF 236
Query: 252 LSGKPDIAMRR--LMQGFGLK 270
+ + +R +MQ +G K
Sbjct: 237 CTKMDEEFSKREIIMQQWGFK 257
>gi|190151197|ref|YP_001969722.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|303252719|ref|ZP_07338881.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 2 str.
4226]
gi|307248913|ref|ZP_07530924.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 2 str.
S1536]
gi|307264546|ref|ZP_07546130.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 13 str.
N273]
gi|229486230|sp|B3GZ94|MURI_ACTP7 RecName: Full=Glutamate racemase
gi|189916328|gb|ACE62580.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|302648458|gb|EFL78652.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 2 str.
4226]
gi|306854608|gb|EFM86800.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 2 str.
S1536]
gi|306870145|gb|EFN01905.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 13 str.
N273]
Length = 267
Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats.
Identities = 78/261 (29%), Positives = 133/261 (50%), Gaps = 6/261 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +IL++DSG+GGL + +R +P H++Y D+ FPY ++ L ++ + + I
Sbjct: 1 MKPTILLYDSGMGGLTIYDAIRQTLPNAHYLYCFDNAYFPYSERSENVLIEQAVKIVQKI 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+KY + V+ACNTA T++ LR F + +G VPAIK AAA +Q+ I +L+T T
Sbjct: 61 AEKYPLDMVVVACNTASTVVLPALREKF-AFPIVGTVPAIKPAAAISQTKTIGLLATKGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R Y + LI Y C + + + L VEE + +D + K +
Sbjct: 120 VERPYVAELIEKYAKDCIVEKIGTTTLVELVEEKIRTGNVDQDRLSKVVAEWQTH---PT 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTH+PL+ +QL P ++D + IA R LL + + ++ F
Sbjct: 177 LDTVILGCTHFPLVKQELQQLLPKVKFFIDPGNGIANRVATLLSEFSLENSAQNKENIAF 236
Query: 252 LSGKPDIAMRR--LMQGFGLK 270
+ + +R +MQ +G K
Sbjct: 237 CTKMDEEFSKREIIMQQWGFK 257
>gi|307257940|ref|ZP_07539694.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 10 str.
D13039]
gi|306863587|gb|EFM95516.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 10 str.
D13039]
Length = 267
Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats.
Identities = 78/261 (29%), Positives = 132/261 (50%), Gaps = 6/261 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +IL++DSG+GGL + +R +P H++Y D+ FPY ++ L ++ + + I
Sbjct: 1 MKPTILLYDSGMGGLTIYDAIRQTLPNAHYLYCFDNAYFPYSERSENVLIEQAVKIVQKI 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+KY + V+ACNTA T++ LR F + +G VPAIK AAA +Q+ I +L+T T
Sbjct: 61 AEKYPLDMVVVACNTASTVVLPALREKF-AFPIVGTVPAIKPAAAISQTKTIGLLATKGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R Y + LI Y C + + + L VEE + +D + K +
Sbjct: 120 VERPYVAELIEKYAKDCIVEKIGTTTLVELVEEKIRTGNVDQDRLSKVVAEWQTH---PT 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTH+PL+ +QL P ++D IA R LL + + ++ F
Sbjct: 177 LDTVILGCTHFPLVKQELQQLLPKVKFFIDPGSGIANRVATLLSEFSLENSAQNKENIAF 236
Query: 252 LSGKPDIAMRR--LMQGFGLK 270
+ + +R +MQ +G K
Sbjct: 237 CTKMDEEFSKREIIMQQWGFK 257
>gi|113868495|ref|YP_726984.1| glutamate racemase [Ralstonia eutropha H16]
gi|113527271|emb|CAJ93616.1| glutamate racemase [Ralstonia eutropha H16]
Length = 269
Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats.
Identities = 67/257 (26%), Positives = 112/257 (43%), Gaps = 7/257 (2%)
Query: 12 LQN-SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ I +FDSG+GGL VL+++R L+P +Y+AD PYG + ++ R +
Sbjct: 1 MNPAPIGVFDSGLGGLSVLREIRALLPHESVLYLADSKYAPYGEKPEKFVEARTLQACE- 59
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L VIACNTA + LR P + +G P +K AAA ++S ++ +L+T
Sbjct: 60 WLIAQGCKALVIACNTATGHAVELLRKQLP-LPIIGVEPGLKPAAAASRSKVVGVLATAN 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TL+ + L+ S + + + L S +E+ I +++ ++
Sbjct: 119 TLKSAKFARLLASLDGESRFICEAGLGLVSLIEQ----GDIDGPAVRERLDTYLTPMLEA 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D +VL CTHYP + R + + +D +IAR+ L H
Sbjct: 175 GADTLVLGCTHYPFLSGTIRAMVGDQLALVDTGSAIARQLARKLAEHKLAAAPDATPHDR 234
Query: 251 FLSGKPDIAMRRLMQGF 267
F S K +R +
Sbjct: 235 FASTKDAAHLRAMAATL 251
>gi|94987309|ref|YP_595242.1| glutamate racemase [Lawsonia intracellularis PHE/MN1-00]
gi|94731558|emb|CAJ54921.1| Glutamate racemase [Lawsonia intracellularis PHE/MN1-00]
Length = 286
Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats.
Identities = 62/262 (23%), Positives = 112/262 (42%), Gaps = 5/262 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ I +FDSG+GGL VLQ ++ LMP +++Y+ D PYG + + S
Sbjct: 1 MNKSSPIGLFDSGVGGLTVLQALQNLMPNENYLYLGDTARLPYGTKSPKTVLHYAIQSAS 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L + Q L +IACNTA L+ TFP + +G + P+ + A + G +++++T
Sbjct: 61 -TLIERQIKLLIIACNTATAAALPLLQETFPFIPIIGVIEPSAQIACKTSLKGHVAVIAT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
+T++ I Y + + + + VEE I E I + F +
Sbjct: 120 ESTIQGKCYEETILRYRPEILVESKACPLFVPIVEEGWFSGPIVESIIIHYLSSLFFNRS 179
Query: 189 GK-RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-- 245
K + D +VL CTHYPL+ +++ + +D++ + A+ + + + N
Sbjct: 180 IKDQPDCLVLGCTHYPLLSETIQKIIGNDITIVDSTVATAKLVQACIIQHNMVNPNTNLI 239
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
+ R
Sbjct: 240 GSTIFLTTDDKVRFARIGSLFL 261
>gi|42523267|ref|NP_968647.1| hypothetical protein Bd1778 [Bdellovibrio bacteriovorus HD100]
gi|39575472|emb|CAE79640.1| murI [Bdellovibrio bacteriovorus HD100]
Length = 268
Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats.
Identities = 52/257 (20%), Positives = 102/257 (39%), Gaps = 9/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSGIGGL VL+++ P F+YV D PYG+ ++K + L
Sbjct: 6 SRPIGVFDSGIGGLTVLKELALQFPHESFLYVGDTARLPYGSKSPQTIRKYSEQII-QFL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+K VIACNTA + + + R + P ++A + I +L+T AT+
Sbjct: 65 EKQNVKAIVIACNTASSQVPE--REIDGLPIYNVIEPGSQRALELSSGKRIGVLATRATV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
++ IH+ Q + + + E + +
Sbjct: 123 NSQAYTHKIHALDPQAQVFDQACPLFVPLAE----EGWDADPVTNLIVFRYLSPLLQNHI 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--RINTHQTRVFDDHAL 250
D ++L CTHYP++ + +++ ++ +D+ ++IA+ R+ +++ +
Sbjct: 179 DTLILGCTHYPILKNSIARVTGSSIELVDSGEAIAQWLSRDFKSGRLGPNKSGEPRRIDI 238
Query: 251 FLSGKPDIAMRRLMQGF 267
+ +
Sbjct: 239 MTTDSSAHFTEMAQRIL 255
>gi|256829170|ref|YP_003157898.1| glutamate racemase [Desulfomicrobium baculatum DSM 4028]
gi|256578346|gb|ACU89482.1| glutamate racemase [Desulfomicrobium baculatum DSM 4028]
Length = 272
Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats.
Identities = 56/248 (22%), Positives = 106/248 (42%), Gaps = 5/248 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSGIGGL VL+ + +P+ F+Y+ D PYG ++ + ++ + +L
Sbjct: 9 PIGVFDSGIGGLTVLKALTEALPKESFLYLGDTARLPYGTKSAKSVTRYVLQ-TTALLKA 67
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
L VIACNTA + + L+ +P + +G + P + A +++G I ++ T +T+
Sbjct: 68 RGIKLLVIACNTATGVSLEALQEAYPELPVIGVIRPGAEAACRSSRNGRIGVIGTESTVN 127
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I + + + EE C +I ++ + G D
Sbjct: 128 ARGYEREILRIRPDAQVFAQACPLFVPLAEEGWCDGQIASLVAERYLGGLV---RDTGID 184
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTH+P++ + + V +D++ + A + +L R + T +
Sbjct: 185 TLVLGCTHFPVLADAIQDVVGPDVTLVDSARTTAEFVQDMLERRDICSTTKERCLTFLAT 244
Query: 254 GKPDIAMR 261
R
Sbjct: 245 DGARRFAR 252
>gi|118445076|ref|YP_879120.1| glutamate racemase [Clostridium novyi NT]
gi|166231036|sp|A0Q3B8|MURI_CLONN RecName: Full=Glutamate racemase
gi|118135532|gb|ABK62576.1| glutamate racemase [Clostridium novyi NT]
Length = 259
Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats.
Identities = 65/259 (25%), Positives = 114/259 (44%), Gaps = 7/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I FDSG+GGL VL++ ++P FIY D PYG +KK F + L
Sbjct: 5 KMPIGFFDSGVGGLSVLREAIKVLPNEDFIYFGDSKNAPYGTKTVDEVKKLT-FNAVEFL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA + ++LR+++ + +G PA+K A + G I +++TP TL
Sbjct: 64 LGHNVKAVVIACNTATSAAIEDLRNSYKDIPIIGIEPALKPAVELNKKGKIVVMATPMTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
++L+ Y + + + L VE+ +K E+ ++ + K
Sbjct: 124 AEKKFNDLMAKYKGRSEMVSLPCPGLVEYVEKGI----VKGQELNNYLQKKLSIIDKKEI 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251
+VL CTHYP I ++ V +D S + + + L + + +F
Sbjct: 180 SSVVLGCTHYPFIKEELSKILGEDVVIIDGSLGTSIQLKRKLIKNKSLNLQDKKGTVKIF 239
Query: 252 LS-GKPDIAMRRLMQGFGL 269
S + ++ + G+
Sbjct: 240 NSLDNNEEIIKISKKLLGI 258
>gi|218887895|ref|YP_002437216.1| glutamate racemase [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218758849|gb|ACL09748.1| glutamate racemase [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 308
Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats.
Identities = 65/266 (24%), Positives = 108/266 (40%), Gaps = 13/266 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GGL VL+ +R MP +Y+ D PYG + + + S L +
Sbjct: 31 PIGMFDSGVGGLTVLKALRTRMPCEDILYLGDTARLPYGTKSAETITRYAVQAASR-LVQ 89
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
+ L V+ACNTA ++ D LR+ P + +G V P + A ++ G I++++T +T+R
Sbjct: 90 RRIKLLVVACNTATSVALDALRAANPGLPVVGVVQPGAQAACRASRRGNIAVIATESTIR 149
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR-- 191
IH I + EE KI ED + ++ F G
Sbjct: 150 GRAYHKAIHGLRPDAQIIGQPCPLFVPLAEEGWVDGKIVEDIAARYLDPIFRPASGSDTP 209
Query: 192 --TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT------- 242
D +VL CTH+PL+ R + +D++ + A + L +
Sbjct: 210 ETPDCLVLGCTHFPLLARAIRNVIGPEPVIVDSAATTALAVQAELQAAGLVRPLRTGPGG 269
Query: 243 RVFDDHALFLSGKPDIAMRRLMQGFG 268
+ + +R G
Sbjct: 270 NECGEARFLTTDDVPRFVRTGGLFLG 295
>gi|50086249|ref|YP_047759.1| glutamate racemase [Acinetobacter sp. ADP1]
gi|49532225|emb|CAG69937.1| glutamate racemase [Acinetobacter sp. ADP1]
Length = 292
Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats.
Identities = 70/263 (26%), Positives = 120/263 (45%), Gaps = 11/263 (4%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
I IFDSGIGGL + Q++ +P +Y AD PYG DH +++
Sbjct: 18 TADAPIGIFDSGIGGLSIAQEIANYLPNEQIVYYADTAFVPYGPRPDHEIRQLTARGIE- 76
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L + ++V+ACNTA D LR + S +G VPA+K A +QS ++++L+TP
Sbjct: 77 WLYRQGCKMAVVACNTASAFSLDGLREHYGESFPIVGLVPALKPAVLQSQSKVVAVLATP 136
Query: 130 ATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
AT R ++I+ + S + V+ + L +E + D +++
Sbjct: 137 ATFRGQLIKDVIYHFALPSGVQVLPVTCLELVPLIEAGQQMSQPCLDLLRQI----LTPV 192
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+ D +VL CTHYP + L + +D+ +AR+ +L + +
Sbjct: 193 IDQGADYLVLGCTHYPFLKDAIHYLFGNRLTLIDSGAPVARQTARILIKHQLLCEKKRTG 252
Query: 248 H---ALFLSGKPDIAMRRLMQGF 267
H A ++SG+ A +++Q
Sbjct: 253 HLRIACYVSGQEVEASGKVIQHL 275
>gi|293371702|ref|ZP_06618113.1| glutamate racemase [Bacteroides ovatus SD CMC 3f]
gi|299147392|ref|ZP_07040457.1| glutamate racemase [Bacteroides sp. 3_1_23]
gi|292633399|gb|EFF51969.1| glutamate racemase [Bacteroides ovatus SD CMC 3f]
gi|298514670|gb|EFI38554.1| glutamate racemase [Bacteroides sp. 3_1_23]
Length = 280
Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats.
Identities = 56/261 (21%), Positives = 109/261 (41%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + L
Sbjct: 11 PIGVFDSGYGGLTILDKIREVLPEYDYIYLGDNARAPYGTRSFEVVYEFTRQAVNK-LFD 69
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ACNTA + ++L P+ LG + P ++ +++ I +L+T
Sbjct: 70 MGCHLVILACNTASAKALRSIQMNDLPQIDPARRVLGVIRPTVECVGEISKNQHIGVLAT 129
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ IH + + + + S VE + + I+K I+ +
Sbjct: 130 AGTIKSESYPLEIHKLFPEIQVSGTACPMWVSLVENNESQDEGADYFIRKYIDQLLS--K 187
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFD 246
+ D ++L CTH+P+++ RQ P + + + +A + L R +
Sbjct: 188 DPQIDTVILGCTHFPILLPKIRQYIPDHISVIAQGEYVAESLKDYLKRHPEMDAKCTKNG 247
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ + + +
Sbjct: 248 NCQFYTTEAEEKFSESASTFL 268
>gi|308181062|ref|YP_003925190.1| glutamate racemase [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|308046553|gb|ADN99096.1| glutamate racemase [Lactobacillus plantarum subsp. plantarum
ST-III]
Length = 273
Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats.
Identities = 52/261 (19%), Positives = 95/261 (36%), Gaps = 7/261 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+++I DSG+GGL V+++ +P ++ D PYG ++ F +
Sbjct: 1 MANEHAIGFMDSGVGGLTVVKQALKQLPRETVYFIGDQARLPYGPRPAEQVRTFS-FQMA 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
D L Q + VIACNTA LR P + A + I +++T
Sbjct: 60 DFLIAKQIKMLVIACNTATAAALPALRQQLSIPVIGVIAPGSRAALKASHRNRIGVIATE 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+R + I + + + VE + K+ + + +
Sbjct: 120 GTIRSNAYRDAILTKDPTATVVSQACPKFVPLVESNEYQSTV----AKRVVAETLKQLKK 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH- 248
+ D +VL CTHYPL+ + + + V +D+ +L ++ R +
Sbjct: 176 QDVDTLVLGCTHYPLLRPLIQNVMGPGVTLIDSGAETVNDVSAVLDYLDIANDRSTKRYP 235
Query: 249 -ALFLSGKPDIAMRRLMQGFG 268
+ +G D G
Sbjct: 236 DEYYTTGAADQFEAIARNWLG 256
>gi|188996911|ref|YP_001931162.1| glutamate racemase [Sulfurihydrogenibium sp. YO3AOP1]
gi|229486280|sp|B2V9I5|MURI_SULSY RecName: Full=Glutamate racemase
gi|188931978|gb|ACD66608.1| glutamate racemase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 260
Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats.
Identities = 57/248 (22%), Positives = 100/248 (40%), Gaps = 10/248 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSGIGGL V +++ P+ Y+ D PYGN + + + S +
Sbjct: 2 PIGIFDSGIGGLTVFKEIAASFPKVDLYYLGDTARVPYGNKSKTTIIRYSVECASYLYHN 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
Y VIACNTA + D LR P P + A +++ I ++ T AT++
Sbjct: 62 YNVDAIVIACNTASSYALDTLREILPIPVIGVVQPGAESAVKVSKNKKIGVIGTSATIKS 121
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ S I+ + + VE I + K ++ + D
Sbjct: 122 NSYFETLKSLDKDLEIYQKACPLFVPLVE----EGWIDNEVAKLTVKEYLDDLVKTGIDT 177
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
++L CTHYPL+ + + L P ++ +D+S +I + + +F++
Sbjct: 178 LILGCTHYPLLKNTIKGLYP-HLNIVDSSVAIVEHLKNI-----KLNIEETGKRKIFITD 231
Query: 255 KPDIAMRR 262
+ +
Sbjct: 232 ESHAFDKL 239
>gi|257454377|ref|ZP_05619640.1| glutamate racemase [Enhydrobacter aerosaccus SK60]
gi|257448280|gb|EEV23260.1| glutamate racemase [Enhydrobacter aerosaccus SK60]
Length = 289
Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats.
Identities = 69/267 (25%), Positives = 116/267 (43%), Gaps = 15/267 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL VL ++ +P +IY+AD + PYG+ + +++ + + L
Sbjct: 6 SAPIGVFDSGLGGLSVLTHLQRRLPFERYIYLADTLHVPYGSRSEAQIRELTLQAVA-WL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
L VIACN+A R +P + +G VPA+K A + + +++L+TPATL
Sbjct: 65 HSQGCKLIVIACNSASAHGLQAARRQYPQVPIVGLVPALKPAVMQSATKQVAVLATPATL 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ +I + V S V G+ + ++ E + K+
Sbjct: 125 HGYLLNEVIEQVAKPQQVT-VHKYSFNSLVPWVELGMPSHHPAVTD-LDHLLSELQDKKV 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPW--------PVDWLDNSDSIARRARCLLPRINTHQTRV 244
D +VL CTH+P Q V +D+ D+IA+R LL + N +
Sbjct: 183 DQLVLGCTHFPFFKAYLAQRIDELMTHQAMGQVALIDSGDAIAKRVHDLLEQANQLASHK 242
Query: 245 F-DDHALFLSGK---PDIAMRRLMQGF 267
+ + + A RL+Q F
Sbjct: 243 ERPRLQFYATANLPTTEQAATRLLQRF 269
>gi|170026279|ref|YP_001722784.1| glutamate racemase [Yersinia pseudotuberculosis YPIII]
gi|229486286|sp|B1JQ44|MURI_YERPY RecName: Full=Glutamate racemase
gi|169752813|gb|ACA70331.1| glutamate racemase [Yersinia pseudotuberculosis YPIII]
Length = 287
Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats.
Identities = 83/263 (31%), Positives = 139/263 (52%), Gaps = 4/263 (1%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ + + LIFDSG+GGL V Q++R L+P H+IY D+V FPYG + +R++ +
Sbjct: 20 ADSPPRPTALIFDSGVGGLSVYQEIRQLLPNLHYIYAFDNVAFPYGEKSGEFIVERVLEI 79
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ + ++ + VIACNTA T+ LR F + +G VPAIK A T++G++ +L+
Sbjct: 80 VTAVQQRHPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLA 138
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT+ +YT +LI + + C I L+ S L E G + + +KK + +
Sbjct: 139 TRATVHASYTLDLIARFATDCKIELLGSSELVEVAETKLHGGVVPLEVLKKILHPWLSMR 198
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
E D IVL CTH+PL+ Q+ P +D+ +IARR L+ + ++
Sbjct: 199 EPP--DTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLISSQENVVSSQDEN 256
Query: 248 HALFLS-GKPDIAMRRLMQGFGL 269
A ++ + A+ ++Q +G
Sbjct: 257 IAYCMALDEDTDALLPVLQSYGF 279
>gi|168185800|ref|ZP_02620435.1| glutamate racemase [Clostridium botulinum C str. Eklund]
gi|169295922|gb|EDS78055.1| glutamate racemase [Clostridium botulinum C str. Eklund]
Length = 259
Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats.
Identities = 69/259 (26%), Positives = 114/259 (44%), Gaps = 7/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I FDSG+GGL VL++ ++P FIY D PYG +KK F + L
Sbjct: 5 KMPIGFFDSGVGGLSVLREAIKILPNEDFIYFGDSKNAPYGTKTVDEVKKLT-FNAVEFL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ VIACNTA + ++LR+++ + +G PA+K A + G I I++TP TL
Sbjct: 64 LEHNVKAIVIACNTATSAAIEDLRNSYKDIPIIGIEPALKPAVELHKKGKIVIMATPMTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ L+ Y + + + L VE+ +K EI + + + K
Sbjct: 124 AEKKFNKLMEKYKGKSEMVSLPCPGLVEYVEKGI----VKGQEINRFLLEKLSVIDKKEI 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251
+VL CTHYP I ++ V +D S + + + L + N+ +F
Sbjct: 180 SSVVLGCTHYPFIKEELSKILGEDVVIIDGSVGTSIQLKRKLIKDNSLNLEDKKGTVKIF 239
Query: 252 LS-GKPDIAMRRLMQGFGL 269
S D + + G+
Sbjct: 240 NSLDDNDEVIGISKKLLGI 258
>gi|299131717|ref|ZP_07024912.1| glutamate racemase [Afipia sp. 1NLS2]
gi|298591854|gb|EFI52054.1| glutamate racemase [Afipia sp. 1NLS2]
Length = 265
Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats.
Identities = 109/264 (41%), Positives = 158/264 (59%), Gaps = 5/264 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+IL+FDSG+GGL VL+++ P+ + YVADD FPYG E+ A+ R++ L
Sbjct: 1 MSKSPAILVFDSGLGGLTVLREITTARPDAAYTYVADDAFFPYGRHEESAIIARVVPLIG 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
D++ ++ P L VIACNTA TL+ D LR + S+ F+G VPAIK A A +++ +S+L T
Sbjct: 61 DLIGRHTPDLVVIACNTASTLVMDHLRKAY-SVPFVGTVPAIKPACASSKTKRVSVLGTR 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++R YT LI + C + LV + LA+ E G + +D I EI CFIE
Sbjct: 120 GTVKREYTKKLIADFAHDCEVTLVGAGNLATLAEAALRGESVSDDAILAEIAPCFIE-GS 178
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
RTD +VLACTHYPL++ R+++PW VDW+D + +IARR LL + ++
Sbjct: 179 PRTDTVVLACTHYPLLLEQIRRIAPWTVDWIDPAPAIARRVESLLDKSE-NENIPAPAKF 237
Query: 250 LFLSG-KPDIAMRRLMQ-GFGLKS 271
LF SG P A+ R +Q FG ++
Sbjct: 238 LFTSGKSPSPALMRALQPFFGAQA 261
>gi|296129171|ref|YP_003636421.1| glutamate racemase [Cellulomonas flavigena DSM 20109]
gi|296020986|gb|ADG74222.1| glutamate racemase [Cellulomonas flavigena DSM 20109]
Length = 285
Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats.
Identities = 57/263 (21%), Positives = 96/263 (36%), Gaps = 13/263 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I IFDSG+GGL V + + +P +Y+ D + PYG A++ + + D
Sbjct: 17 NDAPIGIFDSGVGGLTVARAVLDQLPHESTLYIGDTLNGPYGPKPLAAVRAHALEIMDD- 75
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILS 127
L + VIACN+A + + R + L V PA ++A A T++G I ++
Sbjct: 76 LVDAGVKMLVIACNSASAAVLRDARERYTVRRGLPVVEVVLPAARRAVAATRNGRIGVIG 135
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT+ + + + VE +
Sbjct: 136 TRATVESRAYDDAFAVAGVD--LTSRACPRFVELVEAGVTSGPDALATAHE----YLDPV 189
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245
D +VL CTHYPL+ V + V + +++ A+ L + +
Sbjct: 190 RQAGVDTLVLGCTHYPLLTGVISYVMGDQVTLVSSAEETAKDVYRTLVAHDLERDPAAGP 249
Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268
H +G P + G
Sbjct: 250 PTHRFLATGDPGSFAALARRFLG 272
>gi|332873348|ref|ZP_08441302.1| glutamate racemase [Acinetobacter baumannii 6014059]
gi|323519838|gb|ADX94219.1| glutamate racemase [Acinetobacter baumannii TCDC-AB0715]
gi|332738411|gb|EGJ69284.1| glutamate racemase [Acinetobacter baumannii 6014059]
Length = 266
Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats.
Identities = 65/266 (24%), Positives = 126/266 (47%), Gaps = 10/266 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+
Sbjct: 3 NNNSPIGMIDSGLGGLSLFKHIREALPNEDIIYFADSKYVPYGDRESDWIVSRTTHLISN 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNT + + +R+ ++ + PA+K A A TQS I++L+T
Sbjct: 63 LVAQGKCKAIVIACNTMTAVAVETIRAQI-NVPLIAIEPAVKPAVAITQSKHIAVLATAT 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ +LI +Y + LV + LA ++E E+K ++ +
Sbjct: 122 TVKGKNLKSLIETYAQDIKVSLVPCIGLAEKIETGKA----HTAEVKDYLKNILAPLVEQ 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHA 249
+ D I+L CTHYP + +++ + ++ S+++ + L + + ++ +H
Sbjct: 178 KVDTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLSSESPNEGNHI 237
Query: 250 LFLSGKP----DIAMRRLMQGFGLKS 271
++ S P D+ L + +K+
Sbjct: 238 IWTSSDPLEVADVTFSLLSEKLSVKA 263
>gi|21673123|ref|NP_661188.1| glutamate racemase [Chlorobium tepidum TLS]
gi|25453118|sp|Q8KFN8|MURI_CHLTE RecName: Full=Glutamate racemase
gi|21646198|gb|AAM71530.1| glutamate racemase [Chlorobium tepidum TLS]
Length = 272
Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats.
Identities = 64/258 (24%), Positives = 108/258 (41%), Gaps = 7/258 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I IFDSGIGGL V++ ++ +P IY D PYG+ ++K +++L
Sbjct: 9 DSPIGIFDSGIGGLTVVKAVQAALPSERIIYFGDTARVPYGSKSQVTIRKYARED-TELL 67
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
K+QP L ++ACNT L D + T + +G + A + A T+SG I ++ T AT
Sbjct: 68 MKHQPKLIIVACNTVSALALDVVEQTAGGIPVIGVLKAGAELAVQKTKSGRIGVIGTQAT 127
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + I + + + E I + E GK
Sbjct: 128 IGSNAYTCAIREEKETLEVFPKACPLFVPLAE----EGFIDHPATRLVAEEYLAAFTGKE 183
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-AL 250
D +VL CTHYP++ + ++ + +D+++++A +A LL L
Sbjct: 184 IDTLVLGCTHYPILRKIIESITGPEITIIDSAEAVASKAGELLAARGLLNQSPEKALPHL 243
Query: 251 FLSGKPDIAMRRLMQGFG 268
+S P G
Sbjct: 244 MVSDLPQKFRELYRLFMG 261
>gi|316935236|ref|YP_004110218.1| glutamate racemase [Rhodopseudomonas palustris DX-1]
gi|315602950|gb|ADU45485.1| glutamate racemase [Rhodopseudomonas palustris DX-1]
Length = 264
Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats.
Identities = 103/257 (40%), Positives = 152/257 (59%), Gaps = 4/257 (1%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+IL+FDSG+GGL VL+++ P+ H++YV DD FPYG + A+ R++ L +++
Sbjct: 5 PTILVFDSGLGGLTVLREVVRARPDAHYVYVGDDAFFPYGQRSEEAVIGRVVPLMGELIA 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ P L VIACNTA T+ LR+ + + F+G VPAIK A A +++ +S+L T AT+R
Sbjct: 65 AHAPDLVVIACNTASTMTLAPLRARY-RVPFVGTVPAIKPACARSRTKRVSVLGTSATVR 123
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK--R 191
YT LI + C + LV S+ LA+ E G ++ + I+ EI CF+E + R
Sbjct: 124 LEYTRALIRDFAQGCEVSLVGSVRLATLAETALGGGEVTDAAIRAEIAPCFVEADATRGR 183
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
TD +VLACTHYPL++ +L+PWPVDW+D + +IARR LL H + +F
Sbjct: 184 TDSVVLACTHYPLLLDRLIRLAPWPVDWIDPAPAIARRVVTLLGEATGHAASPKAEM-IF 242
Query: 252 LSGKPDIAMRRLMQGFG 268
SG+ A L FG
Sbjct: 243 TSGRQPRASAGLAPYFG 259
>gi|186893477|ref|YP_001870589.1| glutamate racemase [Yersinia pseudotuberculosis PB1/+]
gi|229486285|sp|B2JZF9|MURI_YERPB RecName: Full=Glutamate racemase
gi|186696503|gb|ACC87132.1| glutamate racemase [Yersinia pseudotuberculosis PB1/+]
Length = 287
Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats.
Identities = 83/263 (31%), Positives = 138/263 (52%), Gaps = 4/263 (1%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ + + LIFDSG+GGL V Q++R L+P H+IY D+V FPYG + +R++ +
Sbjct: 20 ADSPPRPTALIFDSGVGGLSVYQEIRQLLPNLHYIYAFDNVAFPYGEKSGEFIVERVLEI 79
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ + + + VIACNTA T+ LR F + +G VPAIK A T++G++ +L+
Sbjct: 80 VTAVQQSHPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLA 138
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT+ +YT +LI + + C I L+ S L E G + + +KK + +
Sbjct: 139 TRATVHASYTLDLIARFATDCKIELLGSSELVEAAETKLHGGVVPLEVLKKILHPWLSMR 198
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
E D IVL CTH+PL+ Q+ P +D+ +IARR L+ + ++
Sbjct: 199 EPP--DTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLISSQENVISSQDEN 256
Query: 248 HALFLS-GKPDIAMRRLMQGFGL 269
A ++ + A+ ++Q +G
Sbjct: 257 IAYCMALDEDTDALLPVLQSYGF 279
>gi|253583512|ref|ZP_04860710.1| glutamate racemase [Fusobacterium varium ATCC 27725]
gi|251834084|gb|EES62647.1| glutamate racemase [Fusobacterium varium ATCC 27725]
Length = 263
Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats.
Identities = 58/262 (22%), Positives = 98/262 (37%), Gaps = 9/262 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K +I +FDSG+GG VL+++ L+P + IY D+ PYG ++ + +
Sbjct: 1 MKKNYNIGVFDSGVGGTTVLKRIIELLPNENIIYYGDNGNAPYGEKTTKEIQGFCLDIMD 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ VIACNTA D ++ + P K A + + I +LSTP
Sbjct: 61 FFMMN-NCKAVVIACNTATAASLDLIKGRYTVPVIGVISPGAKSAVETSTNKCIGVLSTP 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T ++ I Y ++ L +E + +E IK I
Sbjct: 120 FTAASNAYADEIAKYSKTAKVYQEGCPELCPMIEAGWETFEDRETIIKNHISKF-----P 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDH 248
+ D +VL CTHYP+ + + +D + + L +
Sbjct: 175 RNVDTVVLGCTHYPIAREDIAKNFCGNI--VDPAKETSIALYNTLKNSDLLSDSDAKGKI 232
Query: 249 ALFLSGKPDIAMRRLMQGFGLK 270
F+SG + + Q G +
Sbjct: 233 DFFVSGDKEKFKKVAEQFLGFE 254
>gi|255692422|ref|ZP_05416097.1| glutamate racemase [Bacteroides finegoldii DSM 17565]
gi|260621890|gb|EEX44761.1| glutamate racemase [Bacteroides finegoldii DSM 17565]
Length = 280
Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats.
Identities = 61/261 (23%), Positives = 112/261 (42%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + S L
Sbjct: 11 PIGVFDSGYGGLTILDKIREVLPEYDYIYLGDNARAPYGTRSFEVVYEFTRQAVSK-LFD 69
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ACNTA + ++L + P+ LG + P ++ TQ+ I IL+T
Sbjct: 70 MGCHLVILACNTASAKALRSIQMNDLPNIDPARRVLGVIRPTVECIGNITQNQHIGILAT 129
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ IH + V+ + S VE + + I+K I+ +
Sbjct: 130 AGTVKSESYPLEIHKLFPDIRVSGVACPMWVSLVENNESQNEGTDYFIRKYIDQLLT--K 187
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFD 246
+ D ++L CTH+P+++ RQ P + + + +A+ + L R +
Sbjct: 188 DPQIDTVILGCTHFPILLPKIRQYIPEHISVISQGEYVAQSLKDYLRRHPEMDAKCTKNG 247
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ + + + +
Sbjct: 248 NCSFYTTEAEEKFTESASTFL 268
>gi|160885540|ref|ZP_02066543.1| hypothetical protein BACOVA_03540 [Bacteroides ovatus ATCC 8483]
gi|156109162|gb|EDO10907.1| hypothetical protein BACOVA_03540 [Bacteroides ovatus ATCC 8483]
Length = 280
Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats.
Identities = 56/261 (21%), Positives = 109/261 (41%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + L
Sbjct: 11 PIGVFDSGYGGLTILDKIREVLPEYDYIYLGDNARAPYGTRSFEVVYEFTRQAVNK-LFD 69
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ACNTA + ++L P+ LG + P ++ +++ I +L+T
Sbjct: 70 MGCHLVILACNTASAKALRSIQMNDLPQIDPARRVLGVIRPTVECIGEISKNQHIGVLAT 129
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ IH + + + + S VE + + I+K I+ +
Sbjct: 130 AGTIKSESYPLEIHKLFPEIQVSGTACPMWVSLVENNESQDEGADYFIRKYIDQLLS--K 187
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFD 246
+ D ++L CTH+P+++ RQ P + + + +A + L R +
Sbjct: 188 DPQIDTVILGCTHFPILLPKIRQYIPDHISVIAQGEYVAESLKDYLKRHPEMDAKCTKNG 247
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ + + +
Sbjct: 248 NCQFYTTEAEEKFSESASTFL 268
>gi|260172140|ref|ZP_05758552.1| glutamate racemase [Bacteroides sp. D2]
gi|315920449|ref|ZP_07916689.1| glutamate racemase [Bacteroides sp. D2]
gi|313694324|gb|EFS31159.1| glutamate racemase [Bacteroides sp. D2]
Length = 280
Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats.
Identities = 56/261 (21%), Positives = 109/261 (41%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + L
Sbjct: 11 PIGVFDSGYGGLTILDKIREVLPEYDYIYLGDNARAPYGTRSFEVVYEFTRQAVNK-LFD 69
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ACNTA + ++L P+ LG + P ++ +++ I +L+T
Sbjct: 70 MGCHLVILACNTASAKALRSIQMNDLPQIDPARRVLGVIRPTVECVEEISKNQHIGVLAT 129
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ IH + + + + S VE + + I+K I+ +
Sbjct: 130 AGTIKSESYPLEIHKLFPEIQVSGTACPMWVSLVENNESQDEGADYFIRKYIDQLLS--K 187
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFD 246
+ D ++L CTH+P+++ RQ P + + + +A + L R +
Sbjct: 188 DPQIDTVILGCTHFPILLPKIRQYIPDHISVIAQGEYVAESLKDYLKRHPEMDAKCTKNG 247
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ + + +
Sbjct: 248 NCQFYTTEAEEKFSESASTFL 268
>gi|160898092|ref|YP_001563674.1| glutamate racemase [Delftia acidovorans SPH-1]
gi|160363676|gb|ABX35289.1| glutamate racemase [Delftia acidovorans SPH-1]
Length = 296
Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats.
Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 15/273 (5%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFSDIL 72
+ I +FDSGIGGL VLQ +R +P F+Y+AD PYG+ D +++R + +
Sbjct: 6 SPIGVFDSGIGGLSVLQALRHELPHERFVYLADSGNAPYGDARGDAFVQQRTRTIARHLR 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+++Q + VIACNTA D LR+ P + +G PAIK A+ +Q+G + +++T T+
Sbjct: 66 EQHQIKVLVIACNTATAAAVDMLRAEMPELPLIGVEPAIKPASLSSQTGHVGVMATRGTV 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED---EIKKEIEGCFIEK-- 187
+ L+ + + H+ LA +EE + E+ +
Sbjct: 126 SSARFARLVAEHGQRVQFHVQPCDGLAKAIEESTEQPVPADPMATEVAQLCARYVNALGS 185
Query: 188 ---EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
+ D +VL CTHY R L + ++D +AR+ R +L R+ T +
Sbjct: 186 FGQKTGEMDSLVLGCTHYIFAREQLRTLLGPDIQFIDTGAPVARQTRRVLDRLGTLTSES 245
Query: 245 ------FDDHALFLSGKPDIAMRRLMQGFGLKS 271
L +G + L +
Sbjct: 246 GPLPAAEGQVQLMTTGSLQALQSAASRWLELPA 278
>gi|22298004|ref|NP_681251.1| glutamate racemase [Thermosynechococcus elongatus BP-1]
gi|22294182|dbj|BAC08013.1| glutamate racemase [Thermosynechococcus elongatus BP-1]
Length = 297
Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats.
Identities = 65/255 (25%), Positives = 108/255 (42%), Gaps = 7/255 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I +FDSG+GGL VLQ ++ +P+ F+Y D PYG + + + + +
Sbjct: 16 AIGVFDSGVGGLTVLQALQSRLPQESFLYFGDTARLPYGTRRRSEILQYVREIL-RWMHA 74
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
++V+ACNT+ L ++RS F VP K A + I +++TPAT++
Sbjct: 75 QGVKMAVMACNTSSALALTQVRSEFCFPILGLIVPTAKIAVTLGK--RIGVIATPATVKS 132
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + + I V+ VE D + + + DV
Sbjct: 133 GAYARALQEFSPTVAIAQVACPEFVPLVESNCLEG----DRVHRIVRQTLSPLVEFDPDV 188
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
++ CTHYP + HV Q P V LD + ++AR A L +N ++SG
Sbjct: 189 LIYGCTHYPHLRHVIEQYVPTTVHHLDPAHAVARAAVRKLEAMNLATPCPQGQVQFYVSG 248
Query: 255 KPDIAMRRLMQGFGL 269
P+ + Q G
Sbjct: 249 IPEQFAQLASQWLGY 263
>gi|51594484|ref|YP_068675.1| glutamate racemase [Yersinia pseudotuberculosis IP 32953]
gi|81640781|sp|Q66G56|MURI_YERPS RecName: Full=Glutamate racemase
gi|51587766|emb|CAH19366.1| putative glutamate racemase [Yersinia pseudotuberculosis IP 32953]
Length = 287
Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats.
Identities = 83/263 (31%), Positives = 138/263 (52%), Gaps = 4/263 (1%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ + + LIFDSG+GGL V Q++R L+P H+IY D+V FPYG + +R++ +
Sbjct: 20 ADSPPRPTALIFDSGVGGLSVYQEIRQLLPNLHYIYAFDNVAFPYGEKSGEFIVERVLEI 79
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ + + + VIACNTA T+ LR F + +G VPAIK A T++G++ +L+
Sbjct: 80 VTAVQQSHPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLA 138
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT+ +YT +LI + + C I L+ S L E G + + +KK + +
Sbjct: 139 TRATVHASYTLDLIARFATDCKIELLGSSELVEVAETKLHGGVVPLEVLKKILHPWLSMR 198
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
E D IVL CTH+PL+ Q+ P +D+ +IARR L+ + ++
Sbjct: 199 EPP--DTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLISSQENVISSQDEN 256
Query: 248 HALFLS-GKPDIAMRRLMQGFGL 269
A ++ + A+ ++Q +G
Sbjct: 257 IAYCMALDEDTDALLPVLQSYGF 279
>gi|299771738|ref|YP_003733764.1| glutamate racemase [Acinetobacter sp. DR1]
gi|298701826|gb|ADI92391.1| glutamate racemase [Acinetobacter sp. DR1]
Length = 288
Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats.
Identities = 63/259 (24%), Positives = 115/259 (44%), Gaps = 11/259 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSGIGG+ V ++ +P +Y AD PYG D +++ L
Sbjct: 20 DAPIGIFDSGIGGMSVAAEIARYLPNERIVYYADTAYVPYGPRSDEEIRELTARAVD-WL 78
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ ++V+ACNTA D LR + +G VPA+K A T+S ++++L+TPAT
Sbjct: 79 YRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVAVLATPAT 138
Query: 132 LRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
R +++ + + + ++S+ L VE + ++
Sbjct: 139 FRGQLIKDVVEKFAVPAGVKVMTLTSLELVPCVEAGQQMG----EACLTALKEVLQPAAE 194
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH- 248
+ D +VL CTHYP + L +D+ ++AR+ +L + ++ +
Sbjct: 195 QGADYLVLGCTHYPFLNEAIHHLFDNQFTLVDSGFAVARQTARILIKNALLCDQIGQNVA 254
Query: 249 --ALFLSGKPDIAMRRLMQ 265
++SG A++ ++Q
Sbjct: 255 RIECYVSGNNADALQPVLQ 273
>gi|257791702|ref|YP_003182308.1| glutamate racemase [Eggerthella lenta DSM 2243]
gi|257475599|gb|ACV55919.1| glutamate racemase [Eggerthella lenta DSM 2243]
Length = 303
Score = 222 bits (566), Expect = 5e-56, Method: Composition-based stats.
Identities = 50/270 (18%), Positives = 93/270 (34%), Gaps = 16/270 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG GGL V +++ +P +Y+ D PYG + + + L
Sbjct: 21 NAPIGVFDSGFGGLTVAREIAKELPRESIVYLGDSARCPYGPRSLDEVDGFVQQI-GAWL 79
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L VIACNTA + TFP P + AA T++ + +++T AT+
Sbjct: 80 VERGVKLVVIACNTATAAGLSHAQRTFPVPVIGVVEPGARAAAHATKNRRVGVIATKATV 139
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC-------------GIKIKEDEIKKE 179
+ I + + ++ E+ ++
Sbjct: 140 ESDAYTKAIRHLDAGITVFSTATPRFVEIAEQGLRMAEGPIEDFTSLVSTVYIRPAFQEI 199
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
D +VL CTH+PL+ + + V + ++ A +L R
Sbjct: 200 AREYLEPLRRCDIDTLVLGCTHFPLLKALIGGVVGRDVTLISSAQEAAHDVAHILSRRGA 259
Query: 240 HQTRVF-DDHALFLSG-KPDIAMRRLMQGF 267
+ + + +G + + F
Sbjct: 260 LASEDHEPSYDFYTTGEDVEEFRSFGARVF 289
>gi|332974650|gb|EGK11567.1| glutamate racemase [Kingella kingae ATCC 23330]
Length = 270
Score = 222 bits (565), Expect = 5e-56, Method: Composition-based stats.
Identities = 54/264 (20%), Positives = 111/264 (42%), Gaps = 8/264 (3%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
++ Q I +FDSG+GGL V++ + +P + +Y D PYG + +++ +
Sbjct: 3 NQRKQKPIGVFDSGVGGLTVVRALMERLPNENIVYFGDTARVPYGVKSRNTIEEFTTQIV 62
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILS 127
L + + VIACNT + +++ ++ L + A + A A T++ I +++
Sbjct: 63 E-FLLQNEVKALVIACNTIAAVAYKKVQQMAGNIPVLSVIEAGAQAALATTRNNHIGVIA 121
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+ + IH+ I ++ +L VE + + + I
Sbjct: 122 TSTTVNSNAYARAIHAQNPDTRILSQATPLLVPLVE----EGWLDHEVTRLTIHEYLKPL 177
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-D 246
+ D ++L CTH+PL+ + +P+ ++ +D+S + A L +
Sbjct: 178 LADQIDTLILGCTHFPLLKAAIKHEAPY-IELVDSSTTTAEATAQALAATDLLNPSTAIP 236
Query: 247 DHALFLSGKPDIAMRRLMQGFGLK 270
D+ ++S P + G
Sbjct: 237 DYRFYVSDIPLRFQTIGERFLGRS 260
>gi|29839535|sp|Q8EK90|MURI_SHEON RecName: Full=Glutamate racemase
gi|24345608|gb|AAN53293.1|AE015470_6 glutamate racemase [Shewanella oneidensis MR-1]
Length = 273
Score = 222 bits (565), Expect = 5e-56, Method: Composition-based stats.
Identities = 77/266 (28%), Positives = 127/266 (47%), Gaps = 11/266 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL ++R +P + + YV D+ PYG E+ L + L S +
Sbjct: 1 MSQPILVFDSGIGGLSVLAEIRKRLPHHDYCYVFDNARLPYGELEEQELVSGCVALISQL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+++ + V+ACNTA T++ LR+ + +G VPAIK AA ++S I +L+TP T
Sbjct: 61 VERTHACIVVVACNTASTVVLPALRAKL-HIPVVGVVPAIKPAALLSKSKRIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT LI + CH+ L L E ++ +
Sbjct: 120 VKRHYTHELISQFADDCHVELFGCSELVMMAEHKIATGQLG----IARLTQILSPVVDAN 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--RINTHQTRVFDD-- 247
DV+VL CTH+P++ +Q+ V LD+ +IA+R LL + +H + +
Sbjct: 176 LDVLVLGCTHFPMLRDELQQVLGLGVTLLDSGAAIAKRVDTLLAHGKNISHNSEYERNGS 235
Query: 248 --HALFLSGKPDIAMRRLMQGFGLKS 271
A + + + + G +
Sbjct: 236 LMRAFYTKAEITEGLATTLADCGFST 261
>gi|89889534|ref|ZP_01201045.1| glutamate racemase [Flavobacteria bacterium BBFL7]
gi|89517807|gb|EAS20463.1| glutamate racemase [Flavobacteria bacterium BBFL7]
Length = 262
Score = 222 bits (565), Expect = 5e-56, Method: Composition-based stats.
Identities = 63/248 (25%), Positives = 107/248 (43%), Gaps = 7/248 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I FDSG+GG V +++ L+P + IY+AD PYG + + + +
Sbjct: 1 MSNIQPIGFFDSGVGGTSVWKEVVQLLPHENTIYLADSKHAPYGRKSKEEITQLCIKN-T 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L L + CNTA T LR + + F+G PAIK AA + +G + IL+T
Sbjct: 60 EYLLSRGCKLIAVPCNTATTNSISYLRGHY-DIPFIGIEPAIKPAALNSATGKVGILATK 118
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
TL + ++ + + + +E K +E++ +
Sbjct: 119 GTLTSELFNRTQRAFTKDVNTIEIVGTGIVELIE----SGKKDSEEMRNLLVSITEPFMI 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDH 248
D +VL C+HYP I + ++L P V +D+ ++AR+ +L N + H
Sbjct: 175 SGIDYLVLGCSHYPYIKDMLQELLPSRVKIIDSGAAVARQTYHILKEFNLLNDQISSGHH 234
Query: 249 ALFLSGKP 256
LF + P
Sbjct: 235 ELFSNLNP 242
>gi|169634818|ref|YP_001708554.1| putative glutamate racemase [Acinetobacter baumannii SDF]
gi|169153610|emb|CAP02797.1| putative glutamate racemase [Acinetobacter baumannii]
Length = 266
Score = 222 bits (565), Expect = 5e-56, Method: Composition-based stats.
Identities = 65/266 (24%), Positives = 124/266 (46%), Gaps = 10/266 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ I + DSG+GGL + + +R +P IY AD PYGN E + R L S+
Sbjct: 3 NNNSPIGMIDSGLGGLSLFKHIREALPNEDIIYFADSKYVPYGNRESDWIVSRTTHLISN 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ + VIACNT + + +R+ ++ + PA+K A A T S I++L+T
Sbjct: 63 LVAHGKCKAIVIACNTMTAVAVETIRAQI-NVPLISIEPAVKPAVAMTVSKHIAVLATAT 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ +LI +Y + LV + LA ++E E+K ++ +
Sbjct: 122 TVKGKNLKSLIETYAQDIKVSLVPCIGLAEKIETGKA----HTAEVKDYLKNILAPLVEQ 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHA 249
+ D I+L CTHYP + +++ + ++ S+++ + L + + ++ +H
Sbjct: 178 KVDTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLSSESPNEGNHI 237
Query: 250 LFLSGKP----DIAMRRLMQGFGLKS 271
++ S P D+ L + +K+
Sbjct: 238 IWTSSDPLEVADVTFSLLSEKLSVKA 263
>gi|227513134|ref|ZP_03943183.1| glutamate racemase [Lactobacillus buchneri ATCC 11577]
gi|227083709|gb|EEI19021.1| glutamate racemase [Lactobacillus buchneri ATCC 11577]
Length = 264
Score = 222 bits (565), Expect = 5e-56, Method: Composition-based stats.
Identities = 57/252 (22%), Positives = 103/252 (40%), Gaps = 7/252 (2%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL VL+++ ++P +I+V D PYG ++K + +L K
Sbjct: 1 MDSGVGGLTVLREIVKILPNESYIFVGDQANLPYGQKSPETVRKLTKRIADYML-KQNVK 59
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138
+ VIACNT+ D L+ P P + A A T + I +++T T+
Sbjct: 60 MFVIACNTSTAASLDYLKKILPIPVIGVIAPGAESAVAATNNNKIGVIATNGTVSSGVYQ 119
Query: 139 NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198
+I S + ++ + + VE G + ++++ K D +VL
Sbjct: 120 RIIKSLDPKSDVYSLGCPDFVTMVEHGDAG----SELAREKVSHQLAYFHDKSIDTLVLG 175
Query: 199 CTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHA-LFLSGKP 256
CTH+P++ + +D +D S A+ L + + + F F +G
Sbjct: 176 CTHFPVLEAEIKGAVNSGIDLIDPGISTAKSVADYLRSHHQMRDSSQFPQIKSFFTTGNQ 235
Query: 257 DIAMRRLMQGFG 268
+ + Q G
Sbjct: 236 NDFTKIADQLLG 247
>gi|228932265|ref|ZP_04095149.1| Glutamate racemase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228827390|gb|EEM73140.1| Glutamate racemase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
Length = 265
Score = 222 bits (565), Expect = 5e-56, Method: Composition-based stats.
Identities = 49/253 (19%), Positives = 97/253 (38%), Gaps = 5/253 (1%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+ DSG+GGL V ++ +P+ Y+ D+ PYG ++ + + L ++
Sbjct: 1 MLDSGVGGLTVASEIIRQLPKESIYYIGDNERCPYGPRSVEEVQSFVFEMVE-FLKQFPL 59
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
V+ACNTA L+ P + A T+ G I ++ T T++
Sbjct: 60 KALVVACNTAAAAALAALQEALSIPVIGVIHPGARAAIKVTKKGKIGVIGTVGTIKSNMY 119
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+H + +H + LA+ VE + ++++ + + D ++L
Sbjct: 120 EKALHELDTYLKVHSHACPTLATVVE----NRLEDTAYVTQQVKQALLPLTKEDIDTLIL 175
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257
CTHYPL+ ++ V + +++ A +L + H F +G
Sbjct: 176 GCTHYPLLESYIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFTTGSVS 235
Query: 258 IAMRRLMQGFGLK 270
+ G +
Sbjct: 236 SFEHIAERWLGYQ 248
>gi|108773872|gb|ABG16391.1| glutamate racemase [Yersinia pestis Nepal516]
gi|108778024|gb|ABG12082.1| glutamate racemase [Yersinia pestis Antiqua]
gi|145212464|gb|ABP41871.1| glutamate racemase [Yersinia pestis Pestoides F]
Length = 291
Score = 222 bits (565), Expect = 5e-56, Method: Composition-based stats.
Identities = 83/263 (31%), Positives = 140/263 (53%), Gaps = 4/263 (1%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ + + LIFDSG+GGL V Q++R L+P+ H+IY D+V FPYG + +R++ +
Sbjct: 24 ADSPPRPTALIFDSGVGGLSVYQEIRQLLPDLHYIYAFDNVAFPYGEKSGEFIVERVLEI 83
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ + ++ + VIACNTA T+ LR F + +G VPAIK A T++G++ +L+
Sbjct: 84 VTAVQQRHPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLA 142
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT+ +YT +LI + + C I L+ S L E G + + +KK + +
Sbjct: 143 TRATVHASYTLDLIARFATDCKIELLGSSELVEVAETKLHGGVVPLEVLKKILHPWLSMR 202
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
E D IVL CTH+PL+ Q+ P +D+ +IARR L+ + ++
Sbjct: 203 EPP--DTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLISSQENVISSQDEN 260
Query: 248 HALFLS-GKPDIAMRRLMQGFGL 269
A ++ + A+ ++Q +G
Sbjct: 261 IAYCMALDEDTDALLPVLQSYGF 283
>gi|153003580|ref|YP_001377905.1| glutamate racemase [Anaeromyxobacter sp. Fw109-5]
gi|152027153|gb|ABS24921.1| glutamate racemase [Anaeromyxobacter sp. Fw109-5]
Length = 259
Score = 222 bits (565), Expect = 6e-56, Method: Composition-based stats.
Identities = 55/257 (21%), Positives = 103/257 (40%), Gaps = 9/257 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I IFDSG+GGL V + + +P +Y+ D PYG + + + +
Sbjct: 1 MSR-IGIFDSGVGGLTVQRAILEALPSVDTVYLGDTARVPYGTKSADTVTQYSLRNA-RL 58
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L +++ L V+ACNTA + LR+ P + AA ++ G I ++ T T
Sbjct: 59 LARHEIDLLVVACNTASAVALPALRAELAVPVLGVVEPGARAAARASRGGRIGVIGTQGT 118
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + + + + + EE + ++ + R
Sbjct: 119 VSSGAYQSALRAARPDAEVVARACPLFVPLAEEGWTD--PGDPVVRGAVARYLAPLREAR 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTHYPL+ + P V +D++++IA R + + HA
Sbjct: 177 IDTLVLGCTHYPLLREAIARELPEVV-LVDSAEAIAAEVRARMGE----ERGREGSHAFL 231
Query: 252 LSGKPDIAMRRLMQGFG 268
++ P+ + + G
Sbjct: 232 VTDAPEKFLAVAGRFLG 248
>gi|268318989|ref|YP_003292645.1| hypothetical protein FI9785_498 [Lactobacillus johnsonii FI9785]
gi|262397364|emb|CAX66378.1| murI [Lactobacillus johnsonii FI9785]
Length = 266
Score = 222 bits (565), Expect = 6e-56, Method: Composition-based stats.
Identities = 52/256 (20%), Positives = 89/256 (34%), Gaps = 7/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I + DSG+GGL VL+K+ MP I++ D PYG+ + + L
Sbjct: 3 NRPIGVLDSGLGGLTVLKKVIEKMPNESTIFIGDQANMPYGDRSREEIISLTRDSVN-FL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + CNTA ++ P AA T++ ++++ T AT+
Sbjct: 62 LSKDVKIIIFGCNTATAAAMSTIQKEIPLQIIGVIQSGALAAARTTETKNVAVIGTKATV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + + + LA E ED + +
Sbjct: 122 DSHSYLKEIQYRDPEIKVSEFAQPKLAPLAE-----EDPDEDIKNAVVSESLTPLKNADY 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALF 251
D +VL CTHYPL+ + +D +D +A+ +L R + H +
Sbjct: 177 DTLVLGCTHYPLLREEIVAVVGQDKKIVDPADQVAQYTYNVLRRDDLFAESTAPVKHDYY 236
Query: 252 LSGKPDIAMRRLMQGF 267
+G+ Q
Sbjct: 237 TTGEAKKFTEITRQWM 252
>gi|15806594|ref|NP_295309.1| glutamate racemase [Deinococcus radiodurans R1]
gi|6459350|gb|AAF11147.1|AE002002_5 glutamate racemase [Deinococcus radiodurans R1]
Length = 369
Score = 222 bits (565), Expect = 6e-56, Method: Composition-based stats.
Identities = 70/253 (27%), Positives = 110/253 (43%), Gaps = 9/253 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL VL +++ +P+ +Y+AD PYG D ++ ++ L +
Sbjct: 98 PIGVFDSGAGGLSVLAELQRALPQEDVLYLADTAHVPYGARSDEDIRDLTARAVAE-LVR 156
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA LR F + +G VPA+K A A T+SG++ +L+TP TLR
Sbjct: 157 RGVKAVVVACNTASAFSLTHLRERF-ELPIIGLVPAVKPAVAATKSGVVGVLATPGTLRG 215
Query: 135 TYTSNLIHSYVS--QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
T +++I + + S L VE K E + +
Sbjct: 216 TLLADVIRQWAEPAGVRVMQAVSTELVPLVE----AGKADSPEARVVLRDVLEPLAEAGA 271
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALF 251
D +VL CTHYP + R +D+ ++AR R +L R + + +
Sbjct: 272 DQLVLGCTHYPFLAGSIRAEFGDTFALVDSGAAVARHTRNVLSRGGLLRGGDRTGEVSYL 331
Query: 252 LSGKPDIAMRRLM 264
+ P LM
Sbjct: 332 TTSDPAHLRALLM 344
>gi|150261128|ref|ZP_01917856.1| putative glutamate racemase [Yersinia pestis CA88-4125]
gi|153947950|ref|YP_001399143.1| glutamate racemase [Yersinia pseudotuberculosis IP 31758]
gi|161484906|ref|NP_667666.2| glutamate racemase [Yersinia pestis KIM 10]
gi|161511329|ref|NP_994432.2| glutamate racemase [Yersinia pestis biovar Microtus str. 91001]
gi|162100189|ref|YP_650027.2| glutamate racemase [Yersinia pestis Antiqua]
gi|162139457|ref|YP_645991.2| glutamate racemase [Yersinia pestis Nepal516]
gi|162202299|ref|YP_001164844.2| glutamate racemase [Yersinia pestis Pestoides F]
gi|218930909|ref|YP_002348784.1| glutamate racemase [Yersinia pestis CO92]
gi|229839605|ref|ZP_04459764.1| glutamate racemase [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229841690|ref|ZP_04461846.1| glutamate racemase [Yersinia pestis biovar Orientalis str. India
195]
gi|229896694|ref|ZP_04511859.1| glutamate racemase [Yersinia pestis Pestoides A]
gi|229904756|ref|ZP_04519867.1| glutamate racemase [Yersinia pestis Nepal516]
gi|20177979|sp|Q8ZAA2|MURI_YERPE RecName: Full=Glutamate racemase
gi|167017322|sp|A7FD15|MURI_YERP3 RecName: Full=Glutamate racemase
gi|115349520|emb|CAL22494.1| putative glutamate racemase [Yersinia pestis CO92]
gi|149290536|gb|EDM40613.1| putative glutamate racemase [Yersinia pestis CA88-4125]
gi|152959445|gb|ABS46906.1| glutamate racemase [Yersinia pseudotuberculosis IP 31758]
gi|229678874|gb|EEO74979.1| glutamate racemase [Yersinia pestis Nepal516]
gi|229691029|gb|EEO83082.1| glutamate racemase [Yersinia pestis biovar Orientalis str. India
195]
gi|229695971|gb|EEO86018.1| glutamate racemase [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229700301|gb|EEO88335.1| glutamate racemase [Yersinia pestis Pestoides A]
gi|320013493|gb|ADV97064.1| glutamate racemase [Yersinia pestis biovar Medievalis str. Harbin
35]
Length = 287
Score = 222 bits (565), Expect = 6e-56, Method: Composition-based stats.
Identities = 83/263 (31%), Positives = 140/263 (53%), Gaps = 4/263 (1%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ + + LIFDSG+GGL V Q++R L+P+ H+IY D+V FPYG + +R++ +
Sbjct: 20 ADSPPRPTALIFDSGVGGLSVYQEIRQLLPDLHYIYAFDNVAFPYGEKSGEFIVERVLEI 79
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ + ++ + VIACNTA T+ LR F + +G VPAIK A T++G++ +L+
Sbjct: 80 VTAVQQRHPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLA 138
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT+ +YT +LI + + C I L+ S L E G + + +KK + +
Sbjct: 139 TRATVHASYTLDLIARFATDCKIELLGSSELVEVAETKLHGGVVPLEVLKKILHPWLSMR 198
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
E D IVL CTH+PL+ Q+ P +D+ +IARR L+ + ++
Sbjct: 199 EPP--DTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLISSQENVISSQDEN 256
Query: 248 HALFLS-GKPDIAMRRLMQGFGL 269
A ++ + A+ ++Q +G
Sbjct: 257 IAYCMALDEDTDALLPVLQSYGF 279
>gi|329947436|ref|ZP_08294640.1| glutamate racemase [Actinomyces sp. oral taxon 170 str. F0386]
gi|328525186|gb|EGF52237.1| glutamate racemase [Actinomyces sp. oral taxon 170 str. F0386]
Length = 280
Score = 222 bits (565), Expect = 6e-56, Method: Composition-based stats.
Identities = 55/257 (21%), Positives = 97/257 (37%), Gaps = 12/257 (4%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V + + +P +Y+ D PYG + ++ + + + L
Sbjct: 1 MFDSGVGGLTVARSVLDQLPHERVLYIGDTANGPYGPRDIAEVRSLALSIMDE-LVDRGV 59
Query: 78 VLSVIACNTAFTLIKDELRSTFP----SMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
L VIACNTA + + R + PA + AA T++G + +++T T+
Sbjct: 60 KLLVIACNTASAAVLHDARERYTLGRGVPVIEVIHPAARTAARVTRNGRVGLIATRGTVD 119
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + + + + E E+ E + D
Sbjct: 120 SRAYDDALQAV-PGVELFSQACPRFVELAERGVT----TGPEVLDVAEEYLAPIKAAGVD 174
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV--FDDHALF 251
++L CTHYPL+V + V + +SD A+ L R N + H
Sbjct: 175 TLILGCTHYPLLVGPISYVMGEEVALVTSSDETAKDVYRALARRNLLRGPEACEPRHEFR 234
Query: 252 LSGKPDIAMRRLMQGFG 268
+G P+ + G
Sbjct: 235 STGDPEAFSVLARRFLG 251
>gi|317487823|ref|ZP_07946416.1| Asp/Glu/Hydantoin racemase [Eggerthella sp. 1_3_56FAA]
gi|325830581|ref|ZP_08164002.1| glutamate racemase [Eggerthella sp. HGA1]
gi|316913098|gb|EFV34614.1| Asp/Glu/Hydantoin racemase [Eggerthella sp. 1_3_56FAA]
gi|325487327|gb|EGC89769.1| glutamate racemase [Eggerthella sp. HGA1]
Length = 303
Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats.
Identities = 50/270 (18%), Positives = 93/270 (34%), Gaps = 16/270 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG GGL V +++ +P +Y+ D PYG + + + L
Sbjct: 21 NAPIGVFDSGFGGLTVAREIAKELPRESIVYLGDSARCPYGPRSLDEVDGFVQQI-GAWL 79
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L VIACNTA + TFP P + AA T++ + +++T AT+
Sbjct: 80 VERGVKLVVIACNTATAAGLAHAQRTFPVPVIGVVEPGARAAAHATKNRRVGVIATKATV 139
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC-------------GIKIKEDEIKKE 179
+ I + + ++ E+ ++
Sbjct: 140 ESDAYTKAIRHLDAGITVFSTATPRFVEIAEQGLRMAEGPIEDFTSLVSTVYIRPAFQEI 199
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
D +VL CTH+PL+ + + V + ++ A +L R
Sbjct: 200 AREYLEPLRRCDIDTLVLGCTHFPLLKALIGGVVGREVTLISSAQEAAHDVAHILSRRGA 259
Query: 240 HQTRVF-DDHALFLSG-KPDIAMRRLMQGF 267
+ + + +G + + F
Sbjct: 260 LASEDHEPSYDFYTTGEDVEEFRSFGARVF 289
>gi|238028090|ref|YP_002912321.1| glutamate racemase [Burkholderia glumae BGR1]
gi|237877284|gb|ACR29617.1| Glutamate racemase [Burkholderia glumae BGR1]
Length = 286
Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats.
Identities = 70/258 (27%), Positives = 109/258 (42%), Gaps = 8/258 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ IFDSG+GGL VL+ R +P+ F+YVAD PYG +D + +R + + + L
Sbjct: 16 VGIFDSGLGGLSVLRAARAHLPDEAFVYVADSRYAPYGERDDAFIIERTLAI-GEWLAAR 74
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA +R T ++ +G P IK AA + S + +L+T ATLR
Sbjct: 75 GAKALVVACNTATAQSIAVVRETL-AIPLIGVEPGIKPAALASTSRVAGVLATAATLRSA 133
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
LI + C L L +E G ++ + G D +
Sbjct: 134 RFEALIARHAGDCRFLLQPGHGLVQAIERGDTGSAG----LRTLLAGYLEPMLAAGADTL 189
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHALFLS 253
VL CTHYP + R+L+ + +D ++IAR+ +L L+ +
Sbjct: 190 VLGCTHYPFLDATIRELTQNRLTLVDTGEAIARQLARVLDEHGLRSPAGAEPPPTRLYST 249
Query: 254 GKPDIAMRRLMQGFGLKS 271
GL +
Sbjct: 250 DDGTRLQALAATLLGLDA 267
>gi|86134483|ref|ZP_01053065.1| Asp/Glu/hydantoin racemase [Polaribacter sp. MED152]
gi|85821346|gb|EAQ42493.1| Asp/Glu/hydantoin racemase [Polaribacter sp. MED152]
Length = 263
Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats.
Identities = 67/257 (26%), Positives = 118/257 (45%), Gaps = 7/257 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K QN I FDSGIGG + +++ L+P IY++D PYG ++ +
Sbjct: 1 MKANQNPIGFFDSGIGGTSIWKEVTALLPNESTIYLSDSKNAPYGTKNKDSILDLAIKN- 59
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
++ L L V+ACNTA T D LR+ + + F+G PAIK AA T++ I IL+T
Sbjct: 60 TEFLLNKNCKLIVVACNTATTNAIDYLRANYK-IPFIGIEPAIKPAALKTKTKRIGILAT 118
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
TL + Q + L +E KI E+++ +
Sbjct: 119 KGTLNSALFEKTASTIDQQIIVKETIGTGLVELIE----EGKIASKEMEQLLASYINPLV 174
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDD 247
+ D +VL CTHYP ++ ++++ ++ +D+ ++A++ + +L + + H
Sbjct: 175 KENIDCLVLGCTHYPYLIPAIQKITGNQLEIIDSGQAVAKQTKAILQQHDLMHNGSASAK 234
Query: 248 HALFLSGKPDIAMRRLM 264
H +++ + R L
Sbjct: 235 HEFYINKDKSVLERILS 251
>gi|78187589|ref|YP_375632.1| glutamate racemase [Chlorobium luteolum DSM 273]
gi|78167491|gb|ABB24589.1| glutamate racemase [Chlorobium luteolum DSM 273]
Length = 271
Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats.
Identities = 57/249 (22%), Positives = 107/249 (42%), Gaps = 7/249 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ I IFDSG+GGL V++ +R +P +Y D PYG +++ + L
Sbjct: 8 ESPIGIFDSGVGGLTVVKAVRHALPGERILYFGDTARVPYGPKSQVTIRRYA-EDDTQAL 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
++QP + ++ACNT L D + + LG + A A T++ I ++ T AT
Sbjct: 67 LRHQPKMIIVACNTVSALALDVVEHAADPLPVLGVLEAGATLAVEVTKNRRIGVIGTQAT 126
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + I+ Q + + + E + ++ + + G+
Sbjct: 127 VCSNAYAYAINRLDPQIEVFSRACPLFVPLAE----EGMVNDEATRLIARQYLLPLVGEG 182
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-AL 250
D +VL CTHYP++ V + V +D+++++A R +L + +R L
Sbjct: 183 IDTLVLGCTHYPILRRVIEETVGPAVRIIDSAEAVATRTETMLMKAGMLASRTEPPVPHL 242
Query: 251 FLSGKPDIA 259
+S P
Sbjct: 243 MVSDLPQKF 251
>gi|21957008|gb|AAM83917.1|AE013632_5 glutamate racemase [Yersinia pestis KIM 10]
gi|45437760|gb|AAS63309.1| putative glutamate racemase [Yersinia pestis biovar Microtus str.
91001]
Length = 299
Score = 221 bits (564), Expect = 7e-56, Method: Composition-based stats.
Identities = 83/263 (31%), Positives = 140/263 (53%), Gaps = 4/263 (1%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ + + LIFDSG+GGL V Q++R L+P+ H+IY D+V FPYG + +R++ +
Sbjct: 32 ADSPPRPTALIFDSGVGGLSVYQEIRQLLPDLHYIYAFDNVAFPYGEKSGEFIVERVLEI 91
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ + ++ + VIACNTA T+ LR F + +G VPAIK A T++G++ +L+
Sbjct: 92 VTAVQQRHPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLA 150
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT+ +YT +LI + + C I L+ S L E G + + +KK + +
Sbjct: 151 TRATVHASYTLDLIARFATDCKIELLGSSELVEVAETKLHGGVVPLEVLKKILHPWLSMR 210
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
E D IVL CTH+PL+ Q+ P +D+ +IARR L+ + ++
Sbjct: 211 EPP--DTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLISSQENVISSQDEN 268
Query: 248 HALFLS-GKPDIAMRRLMQGFGL 269
A ++ + A+ ++Q +G
Sbjct: 269 IAYCMALDEDTDALLPVLQSYGF 291
>gi|331680091|ref|ZP_08380753.1| glutamate racemase [Escherichia coli H591]
gi|332282913|ref|ZP_08395326.1| glutamate racemase [Shigella sp. D9]
gi|323943616|gb|EGB39723.1| glutamate racemase [Escherichia coli H120]
gi|324115516|gb|EGC09457.1| glutamate racemase [Escherichia coli E1167]
gi|331072417|gb|EGI43750.1| glutamate racemase [Escherichia coli H591]
gi|332105265|gb|EGJ08611.1| glutamate racemase [Shigella sp. D9]
Length = 289
Score = 221 bits (564), Expect = 7e-56, Method: Composition-based stats.
Identities = 82/260 (31%), Positives = 142/260 (54%), Gaps = 4/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + +
Sbjct: 25 RPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEEFIVERVVAIVTAVQ 84
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T+
Sbjct: 85 ERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTV 143
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R+YT LI + ++C I ++ S + E G + D +K+ + KE
Sbjct: 144 KRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP-- 201
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PL+ Q+ P +D+ +IARR LL + A +
Sbjct: 202 DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCM 261
Query: 253 SGKPD-IAMRRLMQGFGLKS 271
+ P+ + ++Q +G ++
Sbjct: 262 AMTPEAEQLLPVLQRYGFET 281
>gi|227548659|ref|ZP_03978708.1| glutamate racemase [Corynebacterium lipophiloflavum DSM 44291]
gi|227079273|gb|EEI17236.1| glutamate racemase [Corynebacterium lipophiloflavum DSM 44291]
Length = 258
Score = 221 bits (564), Expect = 7e-56, Method: Composition-based stats.
Identities = 54/255 (21%), Positives = 96/255 (37%), Gaps = 10/255 (3%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V + M + IY+ D PYG ++ R + + L +
Sbjct: 1 MFDSGLGGLTVARAMMDQLHNESLIYIGDSANGPYGPQPIADVRIRAQNIADE-LVERGV 59
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ VIACNTA + R + PA+++A A T++ + ++ T T+
Sbjct: 60 KMLVIACNTASAAFLHDARERYDVPVIEVIRPAVRRAIATTRNNRVGVIGTIGTINSGAY 119
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+L + + VE + +I +G + D +VL
Sbjct: 120 QDLFSLQ-PGIEVTAAACPAFVEFVERGVTSGR----QILGVAQGYLEPLQAAGVDTLVL 174
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR----VFDDHALFLS 253
CTHYPL+ V + V + +++ A+ +L + +
Sbjct: 175 GCTHYPLLSGVIQLAMGDNVTLVSSAEETAKDVLRVLTERDLLAPEGLDAPAPTRVFEST 234
Query: 254 GKPDIAMRRLMQGFG 268
G P+ R + G
Sbjct: 235 GDPETFNRLAARFLG 249
>gi|189500924|ref|YP_001960394.1| glutamate racemase [Chlorobium phaeobacteroides BS1]
gi|189496365|gb|ACE04913.1| glutamate racemase [Chlorobium phaeobacteroides BS1]
Length = 269
Score = 221 bits (564), Expect = 7e-56, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 108/260 (41%), Gaps = 11/260 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ + IFDSGIGGL V++ ++ L+P IY D PYG+ ++K IL
Sbjct: 6 SSPVGIFDSGIGGLTVVKAIQALLPSERIIYFGDTARVPYGSKSQVTIRKYAQDDTG-IL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
KYQP L ++ACNT L D ++ + LG + A + A +++ + ++ T AT
Sbjct: 65 MKYQPKLIIVACNTVSALALDVVKRAGHGIPVLGVLEAGAELAVENSRNNQVGVIGTRAT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ +++ + + + + E I + +
Sbjct: 125 VLSNAYPLAMNALNPEVEVFSAACPLFVPLAE----EGFIDHPAAEMIAREYLLPLLDHG 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL- 250
D +VL CTHYP++ + +++ V +D+++++A +++ +L H
Sbjct: 181 IDTLVLGCTHYPILRKMIAEIAGQEVRIIDSAEAVALKSKEMLAGNGMLNGSQC--HVFP 238
Query: 251 --FLSGKPDIAMRRLMQGFG 268
+S P G
Sbjct: 239 HLLVSDLPQKFKSLCELFLG 258
>gi|116629100|ref|YP_814272.1| glutamate racemase [Lactobacillus gasseri ATCC 33323]
gi|116094682|gb|ABJ59834.1| glutamate racemase [Lactobacillus gasseri ATCC 33323]
Length = 283
Score = 221 bits (564), Expect = 7e-56, Method: Composition-based stats.
Identities = 51/256 (19%), Positives = 90/256 (35%), Gaps = 7/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I + DSG+GGL VL+K+ MP I++ D PYG+ + + L
Sbjct: 20 NRPIGVLDSGLGGLTVLKKVIEKMPNESTIFIGDQANMPYGDRSKEEIISLTRDSVN-FL 78
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + CNTA + ++ P AA T++ ++++ T AT+
Sbjct: 79 LSKDVKIIIFGCNTATAVAMSTIKKEIPLQIIGVVQSGALAAARTTETKNVAVIGTKATV 138
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + + + LA E E+ + + +
Sbjct: 139 NSHSYLKEIQYRDPKIQVSEFAQPKLAPLAE-----EDPAEEIKQAVVSESLAPLKKADY 193
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALF 251
D +VL CTHYPL+ + +D +D +A+ +L R H +
Sbjct: 194 DTLVLGCTHYPLLRKEIVAVVGQDRKIVDPADQVAQYTYNVLRRDGLFAAGNSDTKHEYY 253
Query: 252 LSGKPDIAMRRLMQGF 267
+G+ Q
Sbjct: 254 TTGEAKKFTEITRQWM 269
>gi|331685713|ref|ZP_08386296.1| glutamate racemase [Escherichia coli H299]
gi|323964327|gb|EGB59810.1| glutamate racemase [Escherichia coli M863]
gi|331077184|gb|EGI48399.1| glutamate racemase [Escherichia coli H299]
Length = 289
Score = 221 bits (564), Expect = 7e-56, Method: Composition-based stats.
Identities = 82/260 (31%), Positives = 142/260 (54%), Gaps = 4/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + +
Sbjct: 25 RPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEEFIVERVVAIVTAVQ 84
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T+
Sbjct: 85 ERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTV 143
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R+YT LI + ++C I ++ S + E G + D +K+ + KE
Sbjct: 144 KRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP-- 201
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PL+ Q+ P +D+ +IARR LL + A +
Sbjct: 202 DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCM 261
Query: 253 SGKPD-IAMRRLMQGFGLKS 271
+ P+ + ++Q +G ++
Sbjct: 262 AMTPEAEQLLPVLQRYGFET 281
>gi|91791601|ref|YP_561252.1| glutamate racemase [Shewanella denitrificans OS217]
gi|123357218|sp|Q12SP7|MURI_SHEDO RecName: Full=Glutamate racemase
gi|91713603|gb|ABE53529.1| glutamate racemase [Shewanella denitrificans OS217]
Length = 277
Score = 221 bits (564), Expect = 7e-56, Method: Composition-based stats.
Identities = 73/237 (30%), Positives = 116/237 (48%), Gaps = 5/237 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL ++R +P ++ Y+ D+ PYG+ + L + + L
Sbjct: 1 MSGPILVFDSGIGGLSVLAEIRKRLPAENYCYLFDNARLPYGDLSESELIRGCVELICQQ 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + + + V+ACNTA TL+ LR ++ +G VPAIK AA ++ I +L+TP T
Sbjct: 61 VQQVEAKIVVVACNTASTLVLPVLRQRL-TIPVVGVVPAIKPAALLSKRKHIGVLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R YT LI + C + L S L E+ A + + + + + +
Sbjct: 120 VSRDYTHGLISQFAEDCQVDLFGSSELVMLAEQKAAKLPVNNQQ----LAKILAPIKASK 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
DV+VL CTH+P+I Q V LD+ ++IA R LL +
Sbjct: 176 LDVLVLGCTHFPMIKEELSQYLGESVLLLDSGEAIANRVASLLEPAALSEALHSGTT 232
>gi|300362243|ref|ZP_07058419.1| glutamate racemase [Lactobacillus gasseri JV-V03]
gi|300353234|gb|EFJ69106.1| glutamate racemase [Lactobacillus gasseri JV-V03]
Length = 283
Score = 221 bits (564), Expect = 7e-56, Method: Composition-based stats.
Identities = 51/256 (19%), Positives = 91/256 (35%), Gaps = 7/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I + DSG+GGL VL+K+ MP I++ D PYG+ + + +L
Sbjct: 20 NRPIGVLDSGLGGLTVLKKVIEKMPNESTIFIGDQANMPYGDRSKEEIISLTRDSVNFLL 79
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + + CNTA + ++ P AA T++ ++++ T AT+
Sbjct: 80 SK-DVKIIIFGCNTATAVAMSTIQKEVPLQIIGVVQSGALAAARTTETKNVAVIGTKATV 138
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + + LA E E+ + +
Sbjct: 139 NSHSYLKEVQYRDPEIQVSEFAQPKLAPLAE-----EDPAEEIKQAVVSESLAPLRNINY 193
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHALF 251
D +VL CTHYPL+ + +D +D +A+ +L R H +
Sbjct: 194 DTLVLGCTHYPLLRDEIVAVVGQDKKIVDPADQVAQYTYNVLRRDGLFAADDSDTTHEYY 253
Query: 252 LSGKPDIAMRRLMQGF 267
+G+ Q
Sbjct: 254 TTGEAKKFTEITRQWM 269
>gi|20806735|ref|NP_621906.1| glutamate racemase [Thermoanaerobacter tengcongensis MB4]
gi|24418566|sp|Q8RD38|MURI1_THETN RecName: Full=Glutamate racemase 1
gi|20515192|gb|AAM23510.1| Glutamate racemase [Thermoanaerobacter tengcongensis MB4]
Length = 266
Score = 221 bits (564), Expect = 8e-56, Method: Composition-based stats.
Identities = 57/258 (22%), Positives = 105/258 (40%), Gaps = 8/258 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I I DSG+GG+ VL+++ ++PE +IY D + PYGN ++K + +
Sbjct: 1 MDKNGPIGIIDSGVGGITVLKRLLEILPEEDYIYFGDTLRVPYGNRPKEEIEKFTREIVN 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L K + VIACNT + ++ + + F IK A T +G I +++T
Sbjct: 61 -YLKKQKVKAVVIACNT---ICSSINKNDYEILMFGILEAGIKSAVEATSNGRIGVIATK 116
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ I + + L VE + I ++ C E
Sbjct: 117 RTVESEAYLKGIKRLNRNAMVFQKACPELVLIVE----NGFYEASSIYSAVKKCTEEFLE 172
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
K D +VL CTH+P+++ ++ V +D + +A + L N + +
Sbjct: 173 KDIDTLVLGCTHFPILLPFIERVVDNKVTVVDPAIKLAHEVKKYLVENNLVKDKKGGQIR 232
Query: 250 LFLSGKPDIAMRRLMQGF 267
++G+ + ++
Sbjct: 233 FLVTGEKENFIKVAGTFL 250
>gi|157157092|ref|YP_001465466.1| glutamate racemase [Escherichia coli E24377A]
gi|157163444|ref|YP_001460762.1| glutamate racemase [Escherichia coli HS]
gi|209921453|ref|YP_002295537.1| glutamate racemase [Escherichia coli SE11]
gi|218556530|ref|YP_002389444.1| glutamate racemase [Escherichia coli IAI1]
gi|218697683|ref|YP_002405350.1| glutamate racemase [Escherichia coli 55989]
gi|256021672|ref|ZP_05435537.1| glutamate racemase [Shigella sp. D9]
gi|260846776|ref|YP_003224554.1| glutamate racemase MurI [Escherichia coli O103:H2 str. 12009]
gi|260858085|ref|YP_003231976.1| glutamate racemase MurI [Escherichia coli O26:H11 str. 11368]
gi|260870687|ref|YP_003237089.1| glutamate racemase MurI [Escherichia coli O111:H- str. 11128]
gi|293472282|ref|ZP_06664692.1| glutamate racemase [Escherichia coli B088]
gi|307314705|ref|ZP_07594302.1| glutamate racemase [Escherichia coli W]
gi|331670825|ref|ZP_08371661.1| glutamate racemase [Escherichia coli TA271]
gi|167017315|sp|A7ZUI7|MURI_ECO24 RecName: Full=Glutamate racemase
gi|167017316|sp|A8A775|MURI_ECOHS RecName: Full=Glutamate racemase
gi|226707585|sp|B6I5I5|MURI_ECOSE RecName: Full=Glutamate racemase
gi|226722985|sp|B7M723|MURI_ECO8A RecName: Full=Glutamate racemase
gi|254766114|sp|B7LA65|MURI_ECO55 RecName: Full=Glutamate racemase
gi|157069124|gb|ABV08379.1| glutamate racemase [Escherichia coli HS]
gi|157079122|gb|ABV18830.1| glutamate racemase [Escherichia coli E24377A]
gi|209914712|dbj|BAG79786.1| glutamate racemase [Escherichia coli SE11]
gi|218354415|emb|CAV01209.1| glutamate racemase [Escherichia coli 55989]
gi|218363299|emb|CAR00948.1| glutamate racemase [Escherichia coli IAI1]
gi|257756734|dbj|BAI28236.1| glutamate racemase MurI [Escherichia coli O26:H11 str. 11368]
gi|257761923|dbj|BAI33420.1| glutamate racemase MurI [Escherichia coli O103:H2 str. 12009]
gi|257767043|dbj|BAI38538.1| glutamate racemase MurI [Escherichia coli O111:H- str. 11128]
gi|291321376|gb|EFE60816.1| glutamate racemase [Escherichia coli B088]
gi|306905760|gb|EFN36286.1| glutamate racemase [Escherichia coli W]
gi|315063302|gb|ADT77629.1| glutamate racemase [Escherichia coli W]
gi|323380635|gb|ADX52903.1| glutamate racemase [Escherichia coli KO11]
gi|331062080|gb|EGI34003.1| glutamate racemase [Escherichia coli TA271]
Length = 285
Score = 221 bits (564), Expect = 8e-56, Method: Composition-based stats.
Identities = 82/260 (31%), Positives = 142/260 (54%), Gaps = 4/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + +
Sbjct: 21 RPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEEFIVERVVAIVTAVQ 80
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T+
Sbjct: 81 ERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTV 139
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R+YT LI + ++C I ++ S + E G + D +K+ + KE
Sbjct: 140 KRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP-- 197
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PL+ Q+ P +D+ +IARR LL + A +
Sbjct: 198 DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCM 257
Query: 253 SGKPD-IAMRRLMQGFGLKS 271
+ P+ + ++Q +G ++
Sbjct: 258 AMTPEAEQLLPVLQRYGFET 277
>gi|325577829|ref|ZP_08148104.1| glutamate racemase [Haemophilus parainfluenzae ATCC 33392]
gi|325160574|gb|EGC72700.1| glutamate racemase [Haemophilus parainfluenzae ATCC 33392]
Length = 263
Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats.
Identities = 77/259 (29%), Positives = 129/259 (49%), Gaps = 5/259 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++++L FDSG+GGL V ++ + LMP+ H++Y D+ GFPY + + +R + + I
Sbjct: 2 NKSTVLFFDSGMGGLSVYREAKKLMPDNHYLYCFDNAGFPYSEKSEETIIQRTLDICKKI 61
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
Y VIACNTA T++ LR F S+ +G VPAIK AA +Q+ I +L+T T
Sbjct: 62 NQDYPLDAIVIACNTASTVVLPPLREQF-SIPIVGTVPAIKPAAEISQTKHIGLLATKGT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R Y ++LIH + S C + + S L E G + +K E+ +
Sbjct: 121 VKRPYVNDLIHQFASHCVVERLGSTKLVEIAEHKIQGKSVDLIALKNELTPWAS---IEN 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D I L CTH+PLI + P +++D +IA+R + LL ++ +
Sbjct: 178 LDTICLGCTHFPLIKDEIQICLPQVKNFMDPGFAIAKRLQFLLDKLEVRSKSEMKNQVFC 237
Query: 252 LSG-KPDIAMRRLMQGFGL 269
+ + + + +G
Sbjct: 238 TQDVENKYQLEQALALWGF 256
>gi|183597279|ref|ZP_02958772.1| hypothetical protein PROSTU_00524 [Providencia stuartii ATCC 25827]
gi|188023294|gb|EDU61334.1| hypothetical protein PROSTU_00524 [Providencia stuartii ATCC 25827]
Length = 288
Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats.
Identities = 81/264 (30%), Positives = 135/264 (51%), Gaps = 5/264 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
++ +IL+FDSG+GGL V ++++ L+P H+IY D+ FPYG + + R+ L
Sbjct: 21 NLSIRPTILVFDSGVGGLSVYREVKKLLPNAHYIYAFDNEAFPYGEKSEEFIIDRVYQLV 80
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
I K+ +++IACNTA T+ LR+ F +G VPAIK A T++G++ +L+T
Sbjct: 81 DVIAKKHPLTIAIIACNTASTVSLPNLRAHF-RFPVVGVVPAIKPATKLTRNGVVGLLAT 139
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+ R YT LI + + C + + S L E G +I DEI ++ E
Sbjct: 140 KGTVNREYTKELIERFATDCKVLSLGSADLVQLAERKLHGEQIPLDEIANAVKPWLRMPE 199
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT--HQTRVFD 246
D ++L CTH+PL++ Q+ P ++D+ +IARRA L+ ++ D
Sbjct: 200 PP--DTVILGCTHFPLLIEELEQVLPDGTRFIDSGAAIARRAVWLINNQAEEVIDSQEKD 257
Query: 247 DHALFLSGKPDIAMRRLMQGFGLK 270
L +A++ ++ G
Sbjct: 258 FAYCLLMNDAALALQPVLAAEGFN 281
>gi|94986184|ref|YP_605548.1| glutamate racemase [Deinococcus geothermalis DSM 11300]
gi|94556465|gb|ABF46379.1| Glutamate racemase [Deinococcus geothermalis DSM 11300]
Length = 271
Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats.
Identities = 67/253 (26%), Positives = 111/253 (43%), Gaps = 9/253 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ + +FDSG+GGL VL ++R +P F+Y+AD P G D ++ +
Sbjct: 1 MTSEAPLGVFDSGVGGLSVLAQLRRHLPHEDFLYLADTAHVPIGARPDDEIRDLTERAVA 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILST 128
L V+ACNTA LR + PS +G VPA+K A A T+SG++ +L+T
Sbjct: 61 A-LHARGAKGVVVACNTASAFSLTPLRERYGPSFPIIGLVPAVKPAVAATRSGVVGVLAT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVS--SMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
P TLR T ++I + + +++ S L VE + + + +
Sbjct: 120 PGTLRGTLLRDVIRKWADPAGVRVLTAVSAELVPLVE----AGQASSERARAVLRETLTP 175
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
D +VL CTHYP + R+ +D+ ++AR +L +
Sbjct: 176 LAQAGADQLVLGCTHYPFLAESIRREFGDTFALVDSGAAVARHTGNVLAGAGLLREAGRP 235
Query: 247 DH-ALFLSGKPDI 258
H ++G P+
Sbjct: 236 GHATYLVTGNPEA 248
>gi|227524349|ref|ZP_03954398.1| glutamate racemase [Lactobacillus hilgardii ATCC 8290]
gi|227088580|gb|EEI23892.1| glutamate racemase [Lactobacillus hilgardii ATCC 8290]
Length = 264
Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats.
Identities = 57/252 (22%), Positives = 103/252 (40%), Gaps = 7/252 (2%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL VL+++ ++P +I+V D PYG ++K + +L K
Sbjct: 1 MDSGVGGLTVLREIVKILPNESYIFVGDQANLPYGQKSPETVRKLTKRIADYML-KQNVK 59
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138
+ VIACNT+ D L+ P P + A A T + I +++T T+
Sbjct: 60 MFVIACNTSTAASLDYLKRILPIPVIGVIAPGAESAVAATNNNKIGVIATNGTVSSGVYQ 119
Query: 139 NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198
+I S + ++ + + VE G + ++++ K D +VL
Sbjct: 120 RIIKSLDPKSDVYSLGCPDFVTMVEHGDAG----SELAREKVSHQLAYFHDKSIDTLVLG 175
Query: 199 CTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHA-LFLSGKP 256
CTH+P++ + +D +D S A+ L + + + F F +G
Sbjct: 176 CTHFPVLEAEIKGAVNSGIDLIDPGISTAKSVADYLRSHHQMRDSSQFPQIKSFFTTGNQ 235
Query: 257 DIAMRRLMQGFG 268
+ + Q G
Sbjct: 236 NDFTKIADQLLG 247
>gi|259906847|ref|YP_002647203.1| glutamate racemase [Erwinia pyrifoliae Ep1/96]
gi|224962469|emb|CAX53924.1| Glutamate racemase [Erwinia pyrifoliae Ep1/96]
gi|283476639|emb|CAY72467.1| murI [Erwinia pyrifoliae DSM 12163]
Length = 283
Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats.
Identities = 85/260 (32%), Positives = 141/260 (54%), Gaps = 6/260 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++LIFDSG+GGL V ++ L+P+ H++Y D+V FPYG + + +R+M + + +
Sbjct: 21 RPTVLIFDSGVGGLSVYNEICALLPDLHYLYAFDNVAFPYGEKSEEFIVERVMAIVTAVT 80
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Y L VIACN+A T+ LR+ F + +G VPAIK AA T++G++ +L+T T+
Sbjct: 81 RLYPLALVVIACNSASTVTLPALRARF-AFPVVGVVPAIKPAARLTRNGIVGLLATRGTV 139
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT LI + +C ++ S L E G + +E+++ ++ E
Sbjct: 140 KRPYTHELIARFAGECKTEMLGSGELVEIAEAKLHGQPVALEEVRRILQPWLRMPEPP-- 197
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PLI +Q+ P +D+ +IARR LL + D+ AL L
Sbjct: 198 DTVVLGCTHFPLISEELQQVLPEGTRLIDSGAAIARRTVWLLENESPEALSADDNMALCL 257
Query: 253 SGKPDIA--MRRLMQGFGLK 270
+ A + ++Q +G K
Sbjct: 258 -DITEQAVQLIPVLQRYGFK 276
>gi|323974257|gb|EGB69387.1| glutamate racemase [Escherichia coli TW10509]
Length = 289
Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats.
Identities = 82/260 (31%), Positives = 142/260 (54%), Gaps = 4/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + +
Sbjct: 25 RPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEEFIVERVVEIVTAVQ 84
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T+
Sbjct: 85 ERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTV 143
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R+YT LI + ++C I ++ S + E G + D +K+ + KE
Sbjct: 144 KRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP-- 201
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PL+ Q+ P +D+ +IARR LL + A +
Sbjct: 202 DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADVNIAFCM 261
Query: 253 SGKPD-IAMRRLMQGFGLKS 271
+ P+ + ++Q +G ++
Sbjct: 262 AMTPEAEQLLPVLQRYGFET 281
>gi|256832123|ref|YP_003160850.1| glutamate racemase [Jonesia denitrificans DSM 20603]
gi|256685654|gb|ACV08547.1| glutamate racemase [Jonesia denitrificans DSM 20603]
Length = 268
Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats.
Identities = 53/263 (20%), Positives = 97/263 (36%), Gaps = 12/263 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I IFDSG+GGL V + + +P Y+ D PYG +++ + +
Sbjct: 2 NDSPIGIFDSGVGGLTVARSILDQLPGESITYIGDTANTPYGPKPLALVRELALTIMDR- 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPS----MAFLGAVPAIKQAAAYTQSGLISILS 127
L + VIACNTA + + R + +PA ++A A T++G I ++
Sbjct: 61 LVDDGVKMLVIACNTASAAVLRDARERYTVGRGIPVVEVILPAARRAVAATRTGKIGVIG 120
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT+ + + + + V+ VE + +
Sbjct: 121 TQATVASRAYDDALSV-AADLTVSSVACPDFVELVEAGIT----TGPRVIEAATRYLDSL 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV--F 245
+ D ++L CTHYPL+ + V + +++ A+ L ++
Sbjct: 176 KHHDVDTLILGCTHYPLLTGAISYVMGEDVTLVSSAEETAKDVYRTLVAHGLERSPEAGP 235
Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268
H F +G + G
Sbjct: 236 PRHQFFATGDTHAFHVLARRFLG 258
>gi|256827100|ref|YP_003151059.1| glutamate racemase [Cryptobacterium curtum DSM 15641]
gi|256583243|gb|ACU94377.1| glutamate racemase [Cryptobacterium curtum DSM 15641]
Length = 264
Score = 221 bits (563), Expect = 9e-56, Method: Composition-based stats.
Identities = 69/252 (27%), Positives = 110/252 (43%), Gaps = 6/252 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ +FDSG+GG+ VL+ + +P +F+Y D PYG+ ++ + +L +
Sbjct: 10 VGVFDSGVGGISVLRNLVRELPAENFLYYGDSAHAPYGDKTIVEVRSLSANIVETMLAR- 68
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
VIACNTA + + LR +P + +G PA+K AA Q I +++T TL+
Sbjct: 69 GVKAIVIACNTATSAAAEHLRECYPGLPIIGMEPALKPAAINPQHQNILVMATTVTLKLD 128
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L H++ SQ HI + LA VE + D I+ + G + D +
Sbjct: 129 KFQQLAHTWGSQSHIIALPCPGLADLVET----GDLDSDAIRSYLAEKLAPYRG-QVDSV 183
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTHYP + Q+ V D AR+ R LL + +F +
Sbjct: 184 VLGCTHYPFLKRQIHQVLGAEVPLFDGGAGCARQTRRLLSETHLLVNTPQTGRVIFETSS 243
Query: 256 PDIAMRRLMQGF 267
D +L +
Sbjct: 244 ADTQTLKLYERL 255
>gi|120434578|ref|YP_956873.1| glutamate racemase [Gramella forsetii KT0803]
gi|117576728|emb|CAL65197.1| glutamate racemase [Gramella forsetii KT0803]
Length = 264
Score = 221 bits (563), Expect = 9e-56, Method: Composition-based stats.
Identities = 66/253 (26%), Positives = 110/253 (43%), Gaps = 8/253 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GG + +++ L+P + IY++D PYG + + + L
Sbjct: 5 RPIGIFDSGVGGTSIWKEIHRLLPLENTIYLSDSRNAPYGIKTQEKIIQLSIKNTEK-LL 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
K L V+ACNTA T LRS + + G PAIK AA + + I IL+T TL
Sbjct: 64 KLDCKLIVVACNTATTNAIRILRSAYKTAII-GIEPAIKPAALKSANKAIGILATRGTLT 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ Y ++ V L +E K DE KK + G + D
Sbjct: 123 SELFAQTSELYTRDINVIEVEGNGLVELIE----NGKKDADETKKLLLGLLDPMLKAKID 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH--ALF 251
+VL C+HYP ++ + ++ P V +D+ +++AR+ + +L + +
Sbjct: 179 YLVLGCSHYPYLIPLLEEILPPEVKIIDSGEAVARQTKNILENNGLLNISKENTRTPEFY 238
Query: 252 LSGKPDIAMRRLM 264
+ P + +
Sbjct: 239 TNSDPQVLSDIIQ 251
>gi|238853843|ref|ZP_04644208.1| glutamate racemase [Lactobacillus gasseri 202-4]
gi|311111115|ref|ZP_07712512.1| glutamate racemase [Lactobacillus gasseri MV-22]
gi|238833538|gb|EEQ25810.1| glutamate racemase [Lactobacillus gasseri 202-4]
gi|311066269|gb|EFQ46609.1| glutamate racemase [Lactobacillus gasseri MV-22]
Length = 266
Score = 221 bits (563), Expect = 9e-56, Method: Composition-based stats.
Identities = 51/256 (19%), Positives = 90/256 (35%), Gaps = 7/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I + DSG+GGL VL+K+ MP I++ D PYG+ + + L
Sbjct: 3 NRPIGVLDSGLGGLTVLKKVIEKMPNESTIFIGDQANMPYGDRSKEEIISLTRDSVN-FL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + CNTA + ++ P AA T++ ++++ T AT+
Sbjct: 62 LSKDVKIIIFGCNTATAVAMSTIKKEIPLQIIGVVQSGALAAARTTETKNVAVIGTKATV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + + + LA E E+ + + +
Sbjct: 122 NSHSYLKEIQYRDPKIQVSEFAQPKLAPLAE-----EDPAEEIKQAVVSESLAPLKKADY 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALF 251
D +VL CTHYPL+ + +D +D +A+ +L R H +
Sbjct: 177 DTLVLGCTHYPLLRKEIVAVVGQDRKIVDPADQVAQYTYNVLRRDGLFAAGNSDTKHEYY 236
Query: 252 LSGKPDIAMRRLMQGF 267
+G+ Q
Sbjct: 237 TTGEAKKFTEITRQWM 252
>gi|256425483|ref|YP_003126136.1| glutamate racemase [Chitinophaga pinensis DSM 2588]
gi|256040391|gb|ACU63935.1| glutamate racemase [Chitinophaga pinensis DSM 2588]
Length = 272
Score = 221 bits (563), Expect = 9e-56, Method: Composition-based stats.
Identities = 65/265 (24%), Positives = 109/265 (41%), Gaps = 11/265 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I +FDSG GGL VL+++ +P+Y +IY D+ PYGN + +
Sbjct: 1 MTGPIGVFDSGYGGLTVLKEIVATLPQYDYIYFGDNARAPYGNRGFDTIHTYTLQCV-QH 59
Query: 72 LDKYQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISI 125
L L ++ACNTA + + +L P LG + P + TQSG + I
Sbjct: 60 LFDMGCPLVILACNTASARALRTIQQKDLPRIAPDRRVLGVIRPTTEMVGTLTQSGEVGI 119
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
L+T T+ I+ + +H ++ + +E + + +KK ++
Sbjct: 120 LATKGTVASESYPIEINKFFPHVKVHQLACPMWVPIIENGEADSEGADYFVKKYLDQILT 179
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-- 243
+ D +VLACTHYP++ RQ P + L +A + L R + R
Sbjct: 180 --DAPDIDTLVLACTHYPILTKKIRQFLPGGITLLSQGKIVAHGLKDYLHRHPEMEVRLS 237
Query: 244 VFDDHALFLSGKPDIAMRRLMQGFG 268
F + P I ++ G
Sbjct: 238 KNGGRKYFTTDDPVIFEKQTEIFLG 262
>gi|332519960|ref|ZP_08396424.1| glutamate racemase [Lacinutrix algicola 5H-3-7-4]
gi|332044519|gb|EGI80713.1| glutamate racemase [Lacinutrix algicola 5H-3-7-4]
Length = 260
Score = 221 bits (563), Expect = 9e-56, Method: Composition-based stats.
Identities = 65/240 (27%), Positives = 114/240 (47%), Gaps = 7/240 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+NSI IFDSG+GG + +++ L+P IY+AD PYG+ + + + ++ L
Sbjct: 3 KNSIGIFDSGVGGTSIFKEIHALLPNESTIYLADSKYAPYGSKTKNEIIDLSIKN-TEFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA T D LR+T+ + F+G PAIK AA TQ+ I IL+T TL
Sbjct: 62 IDNNCKIIVIACNTATTNAIDILRNTYK-IPFIGIEPAIKPAALQTQTKAIGILATKGTL 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
Y + + + +E + +++ ++ +
Sbjct: 121 SSALFHKTTDLYTNGIKVIEQVGEGIVQLIE----NGDLHTPKMEFLLKKYLQPMLAENI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALF 251
D +VL CTHYP ++ + L P V +D+ ++A++ + +L + N + ++ +
Sbjct: 177 DYLVLGCTHYPYLMPILLNLLPKHVKIIDSGLAVAKQTKSVLEQYNLLNSIGKKPNNDFY 236
>gi|283834735|ref|ZP_06354476.1| hypothetical protein CIT292_08958 [Citrobacter youngae ATCC 29220]
gi|291069665|gb|EFE07774.1| hypothetical protein CIT292_08958 [Citrobacter youngae ATCC 29220]
Length = 260
Score = 221 bits (563), Expect = 9e-56, Method: Composition-based stats.
Identities = 83/257 (32%), Positives = 142/257 (55%), Gaps = 6/257 (2%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 2 LVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSEEFIVERVVEIVTAVQQRYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R+Y
Sbjct: 62 LALAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S L E G + +E+++ + + D +V
Sbjct: 121 THELIARFANECQIAMLGSAELVELAEAKLHGETVSLEELRRILRPWLRM--SEPPDTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF--LSG 254
L CTH+PL+ Q+ P +D+ +IARR LL T ++ A ++
Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDATSTDENVAFCMAMTT 238
Query: 255 KPDIAMRRLMQGFGLKS 271
+ + + ++Q +G K+
Sbjct: 239 EAEQLL-PVLQRYGFKT 254
>gi|182678309|ref|YP_001832455.1| glutamate racemase [Beijerinckia indica subsp. indica ATCC 9039]
gi|182634192|gb|ACB94966.1| glutamate racemase [Beijerinckia indica subsp. indica ATCC 9039]
Length = 287
Score = 221 bits (563), Expect = 9e-56, Method: Composition-based stats.
Identities = 102/266 (38%), Positives = 156/266 (58%), Gaps = 7/266 (2%)
Query: 12 LQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
++ +LIFDSG+GGL V ++ L P+ ++Y ADD FPYG + AL R++ +
Sbjct: 5 MRAPRLLIFDSGLGGLTVFAEILRLRPQADYLYAADDAAFPYGAMSEEALITRVLDVMGR 64
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ Y P VIACNTA TL+ LR+ +P + F+G VPA+K A ++S LIS+L+TP
Sbjct: 65 LIASYAPDAVVIACNTASTLVLPHLRAAYPDLPFVGTVPAVKPAGEISRSHLISVLATPG 124
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ R YT L+ +Y S C + LV S LA E G + ++ I EI CF++ +G+
Sbjct: 125 TVARDYTHELVRTYASHCAVTLVGSRKLAGLAEAMMKGESVPDEAIAHEIAPCFVDFDGR 184
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF----- 245
RTD +VLACTH+PL+ F++L+PWPV+W+D + +IARR +L ++
Sbjct: 185 RTDCVVLACTHFPLLTDHFQRLAPWPVEWIDPAPAIARRLDYVLREELGFRSEGRVEEGV 244
Query: 246 DDHALFLSGKP-DIAMRRLMQGFGLK 270
F G P A+ +++ GL+
Sbjct: 245 RHRVFFTKGGPLSPALEAVLRMRGLE 270
>gi|126176362|ref|YP_001052511.1| glutamate racemase [Shewanella baltica OS155]
gi|166231051|sp|A3DA79|MURI_SHEB5 RecName: Full=Glutamate racemase
gi|125999567|gb|ABN63642.1| glutamate racemase [Shewanella baltica OS155]
Length = 274
Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats.
Identities = 78/256 (30%), Positives = 126/256 (49%), Gaps = 11/256 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL ++R +P + Y+ D+ PYG E+ L + L D+
Sbjct: 1 MSRPILVFDSGIGGLSVLAEIRKSLPHSDYCYLFDNARLPYGELEEQVLIAGCVALVCDL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + ++ V+ACNTA T++ LR+ S+ +G VPAIK AA ++S I +L+TP T
Sbjct: 61 VARTNAMIVVVACNTASTVVLPALRANL-SIPVVGVVPAIKPAAQMSKSKRIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT LI + CH+ L L E+ ++ + +
Sbjct: 120 VKRHYTHELISQFADDCHVELFGCSELVMMAEQKIATGQMD----MHRLADLLAPVVAAQ 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
DV+VL CTH+P+I +Q+ V +D+ +IA+R LL + N
Sbjct: 176 LDVLVLGCTHFPMIQAELQQVLGAGVTLMDSGAAIAKRVVTLLTQQNLIVEERR------ 229
Query: 252 LSGKPDIAMRRLMQGF 267
++ + + MQ F
Sbjct: 230 VTNERETLGESAMQAF 245
>gi|237715314|ref|ZP_04545795.1| glutamate racemase [Bacteroides sp. D1]
gi|262405155|ref|ZP_06081705.1| glutamate racemase [Bacteroides sp. 2_1_22]
gi|294643545|ref|ZP_06721351.1| glutamate racemase [Bacteroides ovatus SD CC 2a]
gi|294807052|ref|ZP_06765871.1| glutamate racemase [Bacteroides xylanisolvens SD CC 1b]
gi|229444623|gb|EEO50414.1| glutamate racemase [Bacteroides sp. D1]
gi|262356030|gb|EEZ05120.1| glutamate racemase [Bacteroides sp. 2_1_22]
gi|292641120|gb|EFF59332.1| glutamate racemase [Bacteroides ovatus SD CC 2a]
gi|294445751|gb|EFG14399.1| glutamate racemase [Bacteroides xylanisolvens SD CC 1b]
Length = 280
Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats.
Identities = 56/261 (21%), Positives = 109/261 (41%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + L
Sbjct: 11 PIGVFDSGYGGLTILDKIREVLPEYDYIYLGDNARAPYGTRSFEVVYEFTRQAVNK-LFD 69
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ACNTA + ++L P+ LG + P ++ +++ I +L+T
Sbjct: 70 MGCHLVILACNTASAKALRSIQMNDLPGIDPARRVLGVIRPTVECVGEISKNQHIGVLAT 129
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ IH + + + + S VE + + I+K I+ +
Sbjct: 130 AGTIKSESYPLEIHKLFPEIQVSGTACPMWVSLVENNESQDEGADYFIRKYIDQLLS--K 187
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFD 246
+ D ++L CTH+P+++ RQ P + + + +A + L R +
Sbjct: 188 DPQIDTVILGCTHFPILLPKIRQYIPEHISVIAQGEYVAESLKDYLKRHPEMDAKCTKNG 247
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ + + +
Sbjct: 248 NCQFYTTEAEEKFSESASTFL 268
>gi|160873307|ref|YP_001552623.1| glutamate racemase [Shewanella baltica OS195]
gi|189030369|sp|A9KW83|MURI_SHEB9 RecName: Full=Glutamate racemase
gi|160858829|gb|ABX47363.1| glutamate racemase [Shewanella baltica OS195]
gi|315265534|gb|ADT92387.1| glutamate racemase [Shewanella baltica OS678]
Length = 274
Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats.
Identities = 78/256 (30%), Positives = 129/256 (50%), Gaps = 11/256 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL ++R +P + Y+ D+ PYG E+ L + L D+
Sbjct: 1 MSRPILVFDSGIGGLSVLAEIRKSLPHSDYCYLFDNARLPYGELEEQVLIAGCVALVCDL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + ++ V+ACNTA T++ LR+ S+ +G VPAIK AA ++S I +L+TP T
Sbjct: 61 VARTNAMIVVVACNTASTVVLPALRANL-SIPVVGVVPAIKPAAQMSKSKRIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT LI + CH+ L L E+ ++ + +
Sbjct: 120 VKRHYTHELISQFADDCHVELFGCSELVMMAEQKIATGEMD----MHRLADLLAPVVAAQ 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
DV+VL CTH+P+I +Q+ V +D+ +IA+R LL + N +
Sbjct: 176 LDVLVLGCTHFPMIQAELQQVLGAGVTLMDSGAAIAKRVVTLLTQQNLIVEQRR------ 229
Query: 252 LSGKPDIAMRRLMQGF 267
++ + + + +MQ F
Sbjct: 230 VTNEREALGQSVMQAF 245
>gi|39934662|ref|NP_946938.1| glutamate racemase [Rhodopseudomonas palustris CGA009]
gi|39648512|emb|CAE27033.1| putative glutamate racemase [Rhodopseudomonas palustris CGA009]
Length = 264
Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats.
Identities = 104/257 (40%), Positives = 152/257 (59%), Gaps = 4/257 (1%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+IL+FDSG+GGL VL+++ P+ H++YV DD FPYG + A+ R++ L +++
Sbjct: 5 PTILVFDSGLGGLTVLREVVRARPDAHYVYVGDDAFFPYGQRSEEAVIGRVVPLMGELIA 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ P L VIACNTA T+ LR+ + + F+G VPAIK A A +++ +S+L T AT+R
Sbjct: 65 AHAPDLVVIACNTASTMTLAPLRARY-RVPFVGTVPAIKPACAGSRTKRVSVLGTSATVR 123
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK--R 191
YT LI + C + LV S+ LA+ E G ++ + I+ EI CF+E + K R
Sbjct: 124 LEYTRALIRDFAQGCEVSLVGSIRLATLAETALGGGEVTDAAIRAEIAPCFVEADAKRGR 183
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
TD +VLACTHYPL++ +L+PWPVDW+D + +IARR LL H +F
Sbjct: 184 TDAVVLACTHYPLLLDRLIRLAPWPVDWIDPAPAIARRVVTLLGPATGHAP-TPGAEMIF 242
Query: 252 LSGKPDIAMRRLMQGFG 268
SG+ A L FG
Sbjct: 243 TSGRHPRASAALAPYFG 259
>gi|11386951|sp|Q9RU10|MURI_DEIRA RecName: Full=Glutamate racemase
Length = 290
Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats.
Identities = 70/253 (27%), Positives = 110/253 (43%), Gaps = 9/253 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL VL +++ +P+ +Y+AD PYG D ++ ++ L +
Sbjct: 19 PIGVFDSGAGGLSVLAELQRALPQEDVLYLADTAHVPYGARSDEDIRDLTARAVAE-LVR 77
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA LR F + +G VPA+K A A T+SG++ +L+TP TLR
Sbjct: 78 RGVKAVVVACNTASAFSLTHLRERF-ELPIIGLVPAVKPAVAATKSGVVGVLATPGTLRG 136
Query: 135 TYTSNLIHSYVS--QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
T +++I + + S L VE K E + +
Sbjct: 137 TLLADVIRQWAEPAGVRVMQAVSTELVPLVE----AGKADSPEARVVLRDVLEPLAEAGA 192
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALF 251
D +VL CTHYP + R +D+ ++AR R +L R + + +
Sbjct: 193 DQLVLGCTHYPFLAGSIRAEFGDTFALVDSGAAVARHTRNVLSRGGLLRGGDRTGEVSYL 252
Query: 252 LSGKPDIAMRRLM 264
+ P LM
Sbjct: 253 TTSDPAHLRALLM 265
>gi|303236418|ref|ZP_07323007.1| glutamate racemase [Prevotella disiens FB035-09AN]
gi|302483390|gb|EFL46396.1| glutamate racemase [Prevotella disiens FB035-09AN]
Length = 280
Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 58/261 (22%), Positives = 104/261 (39%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L+ +R +P+Y +IY+ D+ PYG+ + + + L
Sbjct: 11 PIGVFDSGYGGLTILKGIREQLPQYDYIYLGDNARAPYGSRSFDIVYQFTLQAV-KKLFS 69
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ CNTA + K++L + P LG + P + T+S I IL+T
Sbjct: 70 MGCQLVILGCNTASAKALRTIQKNDLPNIDPRRRVLGVIRPTAEIVGKLTESKHIGILAT 129
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
P T++ + I + + + VE + + +KK I+
Sbjct: 130 PGTIKSESYNMEIKKLWGNVEVTGEACPLWVPIVENNEAEGEGADYFVKKRIDHLLQ--T 187
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFD 246
+ D ++L CTHYP+++ +Q P + + + +A + L R
Sbjct: 188 DPKIDTLILGCTHYPILLPKIKQYVPEGIRIISQGEYVASSLKDYLSRHKDMDNLCTKQG 247
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
F + D
Sbjct: 248 SVRYFTTENADKFKETARIFL 268
>gi|260063790|ref|YP_003196870.1| glutamate racemase [Robiginitalea biformata HTCC2501]
gi|88783235|gb|EAR14408.1| glutamate racemase [Robiginitalea biformata HTCC2501]
Length = 257
Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 80/253 (31%), Positives = 122/253 (48%), Gaps = 8/253 (3%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+FDSG+GGL + ++ L+P H IY+AD PYG A+ + + L +
Sbjct: 2 GVFDSGVGGLTIWHELVRLLPAEHTIYLADSANAPYGGQSPGAILELARKN-TRWLLERG 60
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L V+ACNTA T D LR+ FP + F+G PAIK AA ++SG I +L+T TL +
Sbjct: 61 CKLIVVACNTATTNAIDRLRAEFP-VPFIGIEPAIKPAALNSRSGKIGVLATRGTLSSSL 119
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
++ ++ S I + L R+E + E++ +E + D +V
Sbjct: 120 FASTSRNFGSGIEIVEQEGVDLVERIE----SAGPDDPELRDILERLLKPMLLQGIDYLV 175
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALFLSGK 255
L CTHYPL+ L P V LD +AR++R +L R + H L +G
Sbjct: 176 LGCTHYPLLKPTLEHLLPEGVRILDCGLPVARQSRAILEREGLLRDAGGPVRHELLTNGD 235
Query: 256 PDIAMRRLMQGFG 268
P + + L+Q G
Sbjct: 236 PGVMRQVLLQ-LG 247
>gi|331665623|ref|ZP_08366521.1| glutamate racemase [Escherichia coli TA143]
gi|331057308|gb|EGI29298.1| glutamate racemase [Escherichia coli TA143]
Length = 289
Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 83/260 (31%), Positives = 142/260 (54%), Gaps = 4/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + +
Sbjct: 25 RPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQ 84
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T+
Sbjct: 85 ERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTV 143
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R+YT LI + ++C I ++ S + E G + D +K+ + KE
Sbjct: 144 KRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP-- 201
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PL+ Q+ P +D+ +IARR LL + A +
Sbjct: 202 DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCM 261
Query: 253 SGKPD-IAMRRLMQGFGLKS 271
+ P+ + ++Q +G K+
Sbjct: 262 AMTPEAEQLLPVLQRYGFKT 281
>gi|304412675|ref|ZP_07394279.1| glutamate racemase [Shewanella baltica OS183]
gi|307307285|ref|ZP_07587022.1| glutamate racemase [Shewanella baltica BA175]
gi|304349019|gb|EFM13433.1| glutamate racemase [Shewanella baltica OS183]
gi|306910340|gb|EFN40772.1| glutamate racemase [Shewanella baltica BA175]
Length = 274
Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 78/256 (30%), Positives = 126/256 (49%), Gaps = 11/256 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL ++R +P + Y+ D+ PYG E+ L + L D+
Sbjct: 1 MSRPILVFDSGIGGLSVLAEIRKSLPHSDYCYLFDNARLPYGELEEQVLIAGCIALVCDL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + ++ V+ACNTA T++ LR+ S+ +G VPAIK AA ++S I +L+TP T
Sbjct: 61 VARTNAMIVVVACNTASTVVLPALRANL-SIPVVGVVPAIKPAAQMSKSKRIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT LI + CH+ L L E+ ++ + +
Sbjct: 120 VKRHYTHELISQFADDCHVELFGCSELVMMAEQKIATGEMD----MHRLADLLAPVVAAQ 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
DV+VL CTH+P+I +Q+ V +D+ +IA+R LL + N
Sbjct: 176 LDVLVLGCTHFPMIQAELQQVLGAGVTLMDSGAAIAKRVVTLLTQQNLIVEERR------ 229
Query: 252 LSGKPDIAMRRLMQGF 267
++ + + MQ F
Sbjct: 230 VTNEREALGESAMQAF 245
>gi|152998730|ref|YP_001364411.1| glutamate racemase [Shewanella baltica OS185]
gi|166231052|sp|A6WHQ9|MURI_SHEB8 RecName: Full=Glutamate racemase
gi|151363348|gb|ABS06348.1| glutamate racemase [Shewanella baltica OS185]
Length = 274
Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 78/256 (30%), Positives = 128/256 (50%), Gaps = 11/256 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL ++R +P + Y+ D+ PYG E+ L + L D+
Sbjct: 1 MSRPILVFDSGIGGLSVLAEIRKSLPHSDYCYLFDNARLPYGELEEQVLIAGCVALVCDL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + ++ V+ACNTA T++ LR+ S+ +G VPAIK AA ++S I +L+TP T
Sbjct: 61 VARTNAMIVVVACNTASTVVLPALRANL-SIPVVGVVPAIKPAAQMSKSKRIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT LI + CH+ L L E+ ++ + +
Sbjct: 120 VKRHYTHELISQFADDCHVELFGCSELVMMAEQKIATGEMD----MHRLADLLAPVVAAQ 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
DV+VL CTH+P+I +Q+ V +D+ +IA+R LL + N +
Sbjct: 176 LDVLVLGCTHFPMIQAELQQVLGAGVTLMDSGAAIAKRVVTLLTQQNLIVEQRR------ 229
Query: 252 LSGKPDIAMRRLMQGF 267
++ + + + MQ F
Sbjct: 230 VTNEREAVGQSAMQAF 245
>gi|320534621|ref|ZP_08035066.1| glutamate racemase [Actinomyces sp. oral taxon 171 str. F0337]
gi|320133141|gb|EFW25644.1| glutamate racemase [Actinomyces sp. oral taxon 171 str. F0337]
Length = 287
Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 54/257 (21%), Positives = 96/257 (37%), Gaps = 12/257 (4%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V + + +P +Y+ D PYG + ++ + + + L
Sbjct: 1 MFDSGVGGLTVARSVLDQLPHEQVLYIGDTANGPYGPRDIAEVRSLALSIMDE-LVDRGV 59
Query: 78 VLSVIACNTAFTLIKDELRSTFP----SMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
L VIACNTA + + R + PA + AA T++G + +++T T+
Sbjct: 60 KLLVIACNTASAAVLHDARERYTLGRGVPVIEVIHPAARTAARVTRNGKVGLIATRGTVD 119
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + + + + E E+ E + D
Sbjct: 120 SRAYDDALQAV-PGVELVSQACPRFVELAERGVT----TGPEVLDVAEEYLAPIKAAGVD 174
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFDDHALF 251
++L CTHYPL+V + V + +SD A+ L N + H
Sbjct: 175 TLILGCTHYPLLVGPISYVMGEDVALVTSSDETAKDVYRALAGKNLLRGPDAPEPRHDFA 234
Query: 252 LSGKPDIAMRRLMQGFG 268
+G P+ + G
Sbjct: 235 STGDPEAFSVLARRFLG 251
>gi|227888697|ref|ZP_04006502.1| glutamate racemase [Lactobacillus johnsonii ATCC 33200]
gi|227850724|gb|EEJ60810.1| glutamate racemase [Lactobacillus johnsonii ATCC 33200]
Length = 266
Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 52/256 (20%), Positives = 90/256 (35%), Gaps = 7/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I + DSG+GGL VL+K+ MP I++ D PYG+ + + L
Sbjct: 3 NRPIGVLDSGLGGLTVLKKVIEKMPNESTIFIGDQANMPYGDRSREEIISLTRDSVN-FL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + CNTA + ++ P AA T++ ++++ T AT+
Sbjct: 62 LSKDVKIIIFGCNTATAVAMSTIQKEIPLQIIGVVQSGALAAARTTETKNVAVIGTKATV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + + + LA E ED + +
Sbjct: 122 DSHSYLKEIQYRDPEIKVSEFAQPKLAPLAE-----EDPDEDTKNAVVSESLTPLKNADY 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALF 251
D +VL CTHYPL+ + +D +D +A+ +L R + H +
Sbjct: 177 DTLVLGCTHYPLLRDEIVAVVGQDKKIVDPADQVAQYTYNVLRRDDLFAESTALVKHDYY 236
Query: 252 LSGKPDIAMRRLMQGF 267
+G+ Q
Sbjct: 237 TTGEAKKFTEITRQWM 252
>gi|251793125|ref|YP_003007853.1| glutamate racemase [Aggregatibacter aphrophilus NJ8700]
gi|247534520|gb|ACS97766.1| glutamate racemase [Aggregatibacter aphrophilus NJ8700]
Length = 300
Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 88/261 (33%), Positives = 135/261 (51%), Gaps = 9/261 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++L FDSG+GGL V Q+++ L+P+ H++Y D+ FPY + + +R + + I
Sbjct: 6 KPTLLFFDSGVGGLSVYQEVQKLLPDCHYLYCFDNAFFPYSEKPEEGIVERTLKICQCID 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ Y L VIACNTA T++ LR F S+ +G VPAIK AA TQ+ I +L+T T+
Sbjct: 66 NMYPLDLIVIACNTASTVVLPVLRKHF-SIPIVGTVPAIKPAAEQTQTKHIGLLATKGTV 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R Y S+LI Y S C + + S L E G I +EIK E+ +
Sbjct: 125 KRQYLSDLIDKYASFCQVEKIGSTKLVELAEHKLHGYPIDLNEIKVELSEW---ENIPDL 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
DV+VL CTH+PLI +Q P ++D+ +IA+R + LL + +
Sbjct: 182 DVVVLGCTHFPLIKSEIQQCLPQVKYFIDSGVAIAKRVKSLLKEVKVRLKNQMNSQVFCT 241
Query: 253 SGKPDIAMRRLMQG---FGLK 270
KP + L+Q G +
Sbjct: 242 --KPLVKEDSLLQRIHSLGFE 260
>gi|239502810|ref|ZP_04662120.1| putative glutamate racemase [Acinetobacter baumannii AB900]
Length = 266
Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 61/247 (24%), Positives = 117/247 (47%), Gaps = 6/247 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+
Sbjct: 3 NNNSPIGMIDSGLGGLSLFKHIREALPNEDIIYFADSKYVPYGDRESDWIVSRTTHLISN 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ + VIACNT + + +R+ ++ + PA+K A A T S I +L+T
Sbjct: 63 LVAHGKCKAIVIACNTMTAVAVETIRAQI-NVPLIAIEPAVKPAVAMTVSKHIEVLATAT 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ +LI +Y + LV + LA ++E E+K ++ +
Sbjct: 122 TVKGKNLKSLIETYAQDIKVSLVPCIGLAEKIETGKA----HTAEVKDYLKNILAPLVEQ 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHA 249
+ D I+L CTHYP + + +++ + ++ S+++ + L + + ++ +H
Sbjct: 178 KVDTIILGCTHYPFVSDMIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLSSESPNEGNHI 237
Query: 250 LFLSGKP 256
++ S P
Sbjct: 238 IWTSSDP 244
>gi|192290178|ref|YP_001990783.1| glutamate racemase [Rhodopseudomonas palustris TIE-1]
gi|192283927|gb|ACF00308.1| glutamate racemase [Rhodopseudomonas palustris TIE-1]
Length = 264
Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 103/257 (40%), Positives = 151/257 (58%), Gaps = 4/257 (1%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+IL+FDSG+GGL VL+++ P+ H++YV DD FPYG + A+ R++ L +++
Sbjct: 5 PTILVFDSGLGGLTVLREVVRARPDAHYVYVGDDAFFPYGQRSEEAVIGRVVPLMGELIA 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ P L VIACNTA T+ LR+ + + F+G VPAIK A +++ +S+L T AT+R
Sbjct: 65 AHAPDLVVIACNTASTMTLAPLRARY-RVPFVGTVPAIKPACTGSRTKRVSVLGTSATVR 123
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK--R 191
YT LI + C + LV S+ LA+ E G ++ + I+ EI CF+E + K R
Sbjct: 124 LEYTRALIRDFAQGCEVSLVGSIRLATLAETALGGGEVTDAAIRAEIAPCFVEADAKRGR 183
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
TD +VLACTHYPL++ +L+PWPVDW+D + +IARR LL H +F
Sbjct: 184 TDAVVLACTHYPLLLDRLIRLAPWPVDWIDPAPAIARRVVTLLGPATGHAP-TPGAEMIF 242
Query: 252 LSGKPDIAMRRLMQGFG 268
SG+ A L FG
Sbjct: 243 TSGRHPRASAALAPYFG 259
>gi|193078720|gb|ABO13787.2| Glutamate racemase [Acinetobacter baumannii ATCC 17978]
Length = 266
Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 63/259 (24%), Positives = 118/259 (45%), Gaps = 6/259 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
N I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+
Sbjct: 3 NNNNPIGMIDSGLGGLSLFKYIRQALPNEDIIYFADSKYVPYGDRESDWIVSRTTHLISN 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ + VIACNT + + +R+ ++ + PA+K A A T S I++L+T
Sbjct: 63 LVTHGKCKAIVIACNTMTAVAVETIRAQI-NVPLIAIEPAVKPAVAMTLSKHIAVLATAT 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ +LI +Y + LV + LA ++E E+K ++ +
Sbjct: 122 TVKGKNLKSLIETYAQDIKVSLVPCIGLAEKIETGKA----HTAEVKDYLKNILAPLVEQ 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHA 249
+ D I+L CTHYP + +++ + ++ S+++ + L + + ++ +H
Sbjct: 178 KVDTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLSSESPNEGNHI 237
Query: 250 LFLSGKPDIAMRRLMQGFG 268
++ S P G
Sbjct: 238 IWTSSDPLEVADVTFSLLG 256
>gi|169831664|ref|YP_001717646.1| glutamate racemase [Candidatus Desulforudis audaxviator MP104C]
gi|229486275|sp|B1I4X2|MURI_DESAP RecName: Full=Glutamate racemase
gi|169638508|gb|ACA60014.1| glutamate racemase [Candidatus Desulforudis audaxviator MP104C]
Length = 273
Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats.
Identities = 55/263 (20%), Positives = 100/263 (38%), Gaps = 12/263 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++ +FDSG+GGL V++++ ++P IY D PYG+ L + L
Sbjct: 3 KGTVGLFDSGVGGLTVVREVSVILPGKRVIYFGDTAHVPYGDKSVDELLSYAERIIG-FL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ ACNT+ + +R F P +A + +G I +++T AT+
Sbjct: 62 CSQGADYIIFACNTSSAVSLRLMRDRFQVPMIGLIEPGAAEAVRLSATGRIGLIATEATV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + + C + ++ L VE E +++ +
Sbjct: 122 KAGAYARAVSALNRNCQVFSQAAPRLVPLVESGESDTPKAEQAVRE----YLEPLREQGI 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD------ 246
D ++L CTHYP + V ++ V +D + + R AR + R
Sbjct: 178 DTLILGCTHYPFLRDVIERVLGPEVVLVDPAAATVRAARLDMLRRGFSADNPGAQGEQDT 237
Query: 247 -DHALFLSGKPDIAMRRLMQGFG 268
F+SG D Q G
Sbjct: 238 VSLRYFVSGSADAFRAVAGQFLG 260
>gi|319404222|emb|CBI77815.1| Glutamate racemase [Bartonella rochalimae ATCC BAA-1498]
Length = 270
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 125/256 (48%), Positives = 172/256 (67%), Gaps = 1/256 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ S+L FDSGIGGL +L+++R + EY FIY+AD+ GFPYG WE+ LK+R++ +F+ +L
Sbjct: 3 KQSLLFFDSGIGGLTILREVRLFVSEYQFIYIADNAGFPYGIWEEEILKRRILKIFTYLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ Y P L VIACNTA TL+ +LR FP++ F+G VPAIK AA T+SG+IS+L+TP+T+
Sbjct: 63 ELYNPALCVIACNTASTLMIKDLRRAFPNIRFVGTVPAIKLAAEQTKSGVISVLATPSTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R YT LI+S+ QCH+ LV S LA E Y G + +E++ EI CFIEK K T
Sbjct: 123 RCAYTHELINSFADQCHVQLVGSEKLAGFAENYLHGYPVNHEELRHEILPCFIEKNSKLT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI-NTHQTRVFDDHALF 251
D IVLACTHYP ++++FR+ + WPVDW+D + +IA+ R LLP + D ALF
Sbjct: 183 DTIVLACTHYPFLINLFREQALWPVDWIDPAKAIAKHIRSLLPINVQNKNMKKHTDFALF 242
Query: 252 LSGKPDIAMRRLMQGF 267
S A L+Q F
Sbjct: 243 TSQNISPATENLLQKF 258
>gi|284924068|emb|CBG37167.1| glutamate racemase [Escherichia coli 042]
Length = 285
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 83/260 (31%), Positives = 142/260 (54%), Gaps = 4/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + +
Sbjct: 21 RPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQ 80
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T+
Sbjct: 81 ERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTV 139
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R+YT LI + ++C I ++ S + E G + D +K+ + KE
Sbjct: 140 KRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP-- 197
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PL+ Q+ P +D+ +IARR LL + A +
Sbjct: 198 DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCM 257
Query: 253 SGKPD-IAMRRLMQGFGLKS 271
+ P+ + ++Q +G K+
Sbjct: 258 AMTPEAEQLLPVLQRYGFKT 277
>gi|295093321|emb|CBK82412.1| glutamate racemase [Coprococcus sp. ART55/1]
Length = 255
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 71/255 (27%), Positives = 114/255 (44%), Gaps = 6/255 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
SI +FDSG+GG+ VL+ + LMP ++IY D PYG A+ +R ++ L
Sbjct: 4 RSIGVFDSGLGGISVLRDIVELMPCENYIYFGDSAHAPYGTKTREAILERS-EQCTNFLL 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
VIACNTA ++ LR +PS+ +G PA+K A + + +++++TPATL
Sbjct: 63 AKDVKAIVIACNTATSVAASTLRQQYPSIPIIGIEPALKPAVLWKEHDKVAVMATPATLA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
L+ Y + I+ V LA VE+ +EI + ++G K D
Sbjct: 123 LPKFHELMKHYSKESDIYPVPCPGLADYVEKGIFDG----EEITEFLKGLLAPSLEKHVD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALFL 252
IVL CTHYP + V ++++ V + + A + L +
Sbjct: 179 AIVLGCTHYPFVEKVIQRIAGPDVKIFNGAHGTALELQRRLRIAELLTPSIEKGTVEFYS 238
Query: 253 SGKPDIAMRRLMQGF 267
S ++ Q F
Sbjct: 239 SSTNPETIKLCHQLF 253
>gi|209884599|ref|YP_002288456.1| glutamate racemase [Oligotropha carboxidovorans OM5]
gi|209872795|gb|ACI92591.1| glutamate racemase [Oligotropha carboxidovorans OM5]
Length = 264
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 104/262 (39%), Positives = 154/262 (58%), Gaps = 8/262 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ +IL+FDSG+GGL VL+++ P+ + YVADD FPYG E+ + R++ L
Sbjct: 1 MSIPRAILVFDSGLGGLTVLREIAAARPDAAYTYVADDAFFPYGQHEEDEIIARVVPLIG 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
D++D+++P L VIACNTA TL+ D LR + S+ F+G VPAIK A A +++ +S+L T
Sbjct: 61 DLIDRHRPDLVVIACNTASTLVMDHLRKAY-SVPFVGTVPAIKPACAASKTKKVSVLGTR 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++R YT LI ++ C + LV + LAS E G I +D ++ EI CF+E +
Sbjct: 120 GTVKREYTRTLIRNFAQGCDVTLVGAENLASLAERALRGEAISDDAVRAEIAACFVE-DS 178
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
RTD +VLACTHYPL++ ++++PWPV W+D + +IARR L+ R
Sbjct: 179 PRTDTVVLACTHYPLLLEQIQRIAPWPVAWIDPAPAIARRVVSLI---GPQADRSAAPAK 235
Query: 250 L-FLSGK--PDIAMRRLMQGFG 268
F SG+ L FG
Sbjct: 236 FLFTSGRAPTATLETALRPFFG 257
>gi|119899045|ref|YP_934258.1| glutamate racemase [Azoarcus sp. BH72]
gi|119671458|emb|CAL95371.1| glutamate racemase [Azoarcus sp. BH72]
Length = 271
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 53/265 (20%), Positives = 104/265 (39%), Gaps = 7/265 (2%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ + SI +FDSGIGGL V++ + +P + IY D PYG +++ +
Sbjct: 3 ADARASRSIGVFDSGIGGLTVVRALMERLPFENIIYFGDTARVPYGVKSVATIEQFTAQI 62
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISIL 126
L + + ++ACNT + + + + L + + A A + G I ++
Sbjct: 63 TD-FLLQQDVKMLIVACNTMAAVAAHIVAARAGGIPVLDVIEAGARAAVAASPGGRIGVI 121
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
TP T+ + IH + ++ + + VE + + +
Sbjct: 122 GTPTTVNSNAYARRIHELDAGARVYSQACPLFVPLVE----EGWLDHPVTRMTAQEYLRP 177
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+ D +VL CTHYPL+ + R ++ V +D++ + A A L Q
Sbjct: 178 VLAEEVDSLVLGCTHYPLLKPLLRDVAGPGVKLIDSALTTAELAAERLNDCGLAQGGSAP 237
Query: 247 -DHALFLSGKPDIAMRRLMQGFGLK 270
++ +++ P + G
Sbjct: 238 ANYRYYVTDVPLRFQTIGERFLGRS 262
>gi|171463476|ref|YP_001797589.1| glutamate racemase [Polynucleobacter necessarius subsp. necessarius
STIR1]
gi|171193014|gb|ACB43975.1| glutamate racemase [Polynucleobacter necessarius subsp. necessarius
STIR1]
Length = 268
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 65/252 (25%), Positives = 114/252 (45%), Gaps = 6/252 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL +L + +P++ +IY+AD PYG + R + L + L
Sbjct: 4 IGVFDSGVGGLSILDEALRQLPQHDYIYLADSANAPYGEKSSDWIATRSLGLCN-YLASK 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA ++R+ ++ +G P IK AA +Q+ ++ +L+T ATL+
Sbjct: 63 ECDAIVVACNTATAEAIKQIRAQL-AIPIIGVEPGIKPAAMQSQNHIVGVLATEATLKSD 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ L+ + S C + L +E ++ + + + D I
Sbjct: 122 KFNALLATLPSDCQFIKQAGAGLVPLIESGNADG----EDTLELLAKHLEPIQDAGADTI 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTHYP + R+L + +D SD++ R+ + L + L LS K
Sbjct: 178 VLGCTHYPFLKKAIRKLLGESITLIDTSDAVVRQLKQQLESLKKESGNKEFGSVLLLSSK 237
Query: 256 PDIAMRRLMQGF 267
+ + + Q
Sbjct: 238 DESLLLLMAQDL 249
>gi|163815643|ref|ZP_02207016.1| hypothetical protein COPEUT_01818 [Coprococcus eutactus ATCC 27759]
gi|158449280|gb|EDP26275.1| hypothetical protein COPEUT_01818 [Coprococcus eutactus ATCC 27759]
Length = 255
Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats.
Identities = 69/255 (27%), Positives = 112/255 (43%), Gaps = 6/255 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
SI +FDSG+GG+ VL+ + LMP ++IY D PYG A+ +R ++ L
Sbjct: 4 RSIGVFDSGLGGISVLRDIVELMPYENYIYFGDSAHAPYGTKTREAILERS-EQCTNFLL 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
VIACNTA ++ LR +PS+ +G PA+K A + + +++++TPATL
Sbjct: 63 AKDVKAIVIACNTATSVAASTLRQQYPSIPIIGIEPALKPAVLWKEHDKVAVMATPATLA 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
L+ Y + I+ + LA VE +EI + + K+ D
Sbjct: 123 LPKFHELMKHYSKESDIYPIPCPGLADYVERGIFDG----EEITEFLRELLAPYLAKKID 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALFL 252
IVL CTHYP + V ++++ V + + A + L +
Sbjct: 179 AIVLGCTHYPFVEKVIKRIAGPDVKIFNGAHGTALELQRRLRIAELLTPSIEKGSVEFYS 238
Query: 253 SGKPDIAMRRLMQGF 267
S ++ Q F
Sbjct: 239 SSTNPKTIKLCHQLF 253
>gi|237719665|ref|ZP_04550146.1| glutamate racemase [Bacteroides sp. 2_2_4]
gi|298482436|ref|ZP_07000622.1| glutamate racemase [Bacteroides sp. D22]
gi|229450934|gb|EEO56725.1| glutamate racemase [Bacteroides sp. 2_2_4]
gi|298271415|gb|EFI12990.1| glutamate racemase [Bacteroides sp. D22]
Length = 280
Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats.
Identities = 56/261 (21%), Positives = 108/261 (41%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + L
Sbjct: 11 PIGVFDSGYGGLTILDKIREVLPEYDYIYLGDNARAPYGTRSFEVVYEFTRQAVNK-LFD 69
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ACNTA + ++L P+ LG + P ++ +++ I +L+T
Sbjct: 70 MGCHLVILACNTASAKALRSIQMNDLPGIDPARRVLGVIRPTVECVGEISKNQHIGVLAT 129
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ IH + + + + S VE + + I+K I +
Sbjct: 130 AGTIKSESYPLEIHKLFPEIQVSGTACPMWVSLVENNESQDEGADYFIRKYINQLLS--K 187
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFD 246
+ D ++L CTH+P+++ RQ P + + + +A + L R +
Sbjct: 188 DPQIDTVILGCTHFPILLPKIRQYIPEHISVIAQGEYVAESLKDYLKRHPEMDAKCTKNG 247
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ + + +
Sbjct: 248 NCQFYTTEAEEKFSESASTFL 268
>gi|295088107|emb|CBK69630.1| glutamate racemase [Bacteroides xylanisolvens XB1A]
Length = 280
Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats.
Identities = 56/261 (21%), Positives = 108/261 (41%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + L
Sbjct: 11 PIGVFDSGYGGLTILDKIREVLPEYDYIYLGDNARAPYGTRSFEVVYEFTRQAVNK-LFD 69
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ACNTA + ++L P+ LG + P ++ +++ I +L+T
Sbjct: 70 MGCHLVILACNTASAKALRSIQMNDLPGIDPARRVLGVIRPTVECVGEISKNQHIGVLAT 129
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ IH + + + + S VE + + I+K I +
Sbjct: 130 AGTIKSESYPLEIHKLFPEIQVSGTACPMWVSLVENNESQDEGADYFIRKYINQLLS--K 187
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFD 246
+ D ++L CTH+P+++ RQ P + + + +A + L R +
Sbjct: 188 DPQIDTVILGCTHFPILLPKIRQYIPEHISVIAQGEYVAESLKDYLKRHPEMDAKCTKNG 247
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ + + +
Sbjct: 248 NCQFYTTEAEEKFSESASTFL 268
>gi|28275188|ref|NP_715848.2| glutamate racemase [Shewanella oneidensis MR-1]
Length = 302
Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats.
Identities = 78/266 (29%), Positives = 127/266 (47%), Gaps = 11/266 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L IL+FDSGIGGL VL ++R +P + + YV D+ PYG E+ L + L S +
Sbjct: 30 LSQPILVFDSGIGGLSVLAEIRKRLPHHDYCYVFDNARLPYGELEEQELVSGCVALISQL 89
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+++ + V+ACNTA T++ LR+ + +G VPAIK AA ++S I +L+TP T
Sbjct: 90 VERTHACIVVVACNTASTVVLPALRAKL-HIPVVGVVPAIKPAALLSKSKRIGLLATPGT 148
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT LI + CH+ L L E ++ +
Sbjct: 149 VKRHYTHELISQFADDCHVELFGCSELVMMAEHKIATGQLG----IARLTQILSPVVDAN 204
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP--RINTHQTRVFDD-- 247
DV+VL CTH+P++ +Q+ V LD+ +IA+R LL + +H + +
Sbjct: 205 LDVLVLGCTHFPMLRDELQQVLGLGVTLLDSGAAIAKRVDTLLAHGKNISHNSEYERNGS 264
Query: 248 --HALFLSGKPDIAMRRLMQGFGLKS 271
A + + + + G +
Sbjct: 265 LMRAFYTKAEITEGLATTLADCGFST 290
>gi|262280557|ref|ZP_06058341.1| glutamate racemase [Acinetobacter calcoaceticus RUH2202]
gi|262258335|gb|EEY77069.1| glutamate racemase [Acinetobacter calcoaceticus RUH2202]
Length = 266
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 65/257 (25%), Positives = 119/257 (46%), Gaps = 6/257 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
N I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+++
Sbjct: 5 NNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLISNLV 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACNT + + +R+ ++ + PA+K A A T S I++L+T T+
Sbjct: 65 AQGKCKAIVIACNTMTAVAIETIRAQI-NVPLIAIEPAVKPAVAMTMSKHIAVLATATTV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ NLI +Y + LV + LA ++E E+K ++ ++
Sbjct: 124 KGKNLQNLIETYAQNIKVSLVPCIGLAEKIETGKA----HTAEVKDYLKNILAPLVEQKV 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHALF 251
D I+L CTHYP + ++ + L + ++ S+++ + L + ++ +H ++
Sbjct: 180 DTIILGCTHYPFVSNIIQDLVGSNIQIIEPSEAVTAQLIRQLNQYKLSSESPNEGNHIIW 239
Query: 252 LSGKPDIAMRRLMQGFG 268
S P G
Sbjct: 240 TSSDPLEVADVTFSLLG 256
>gi|218707594|ref|YP_002415113.1| glutamate racemase [Escherichia coli UMN026]
gi|218434691|emb|CAR15624.2| glutamate racemase [Escherichia coli UMN026]
Length = 289
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 82/260 (31%), Positives = 141/260 (54%), Gaps = 4/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + +
Sbjct: 25 RPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQ 84
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T+
Sbjct: 85 KRYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTV 143
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R+YT LI + ++C I ++ S + E G + D +K+ + KE
Sbjct: 144 KRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP-- 201
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PL+ Q+ P +D+ +IARR LL + A +
Sbjct: 202 DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCM 261
Query: 253 SGKPD-IAMRRLMQGFGLKS 271
+ P+ + ++Q +G ++
Sbjct: 262 AMTPEAEQLLPVLQRYGFET 281
>gi|260913044|ref|ZP_05919526.1| glutamate racemase [Pasteurella dagmatis ATCC 43325]
gi|260632631|gb|EEX50800.1| glutamate racemase [Pasteurella dagmatis ATCC 43325]
Length = 269
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 82/259 (31%), Positives = 139/259 (53%), Gaps = 5/259 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q +IL FDSG+GG V ++ + L+P H++Y D+ FPY + + +R++ + DI
Sbjct: 6 QPTILFFDSGMGGFSVYKETKQLLPNCHYLYCFDNAFFPYSEKTEKKIIERVLMICQDIN 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
KY L VIACNTA T++ LR+ F S+ +G VPAIK AA ++++ I +L+T T+
Sbjct: 66 SKYPLDLIVIACNTASTVVLPSLRAHF-SIPIVGTVPAIKPAAEHSETKHIGLLATKGTV 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R+Y +NLI Y C + + S L E+ G + +K+E++ +
Sbjct: 125 KRSYVANLISQYAGDCIVEKIGSTKLVEIAEQKLHGKAVDLVALKEELKLW---ENIVDL 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
DV+VL CTH+PLI P ++D+ +IA R + LL +I ++ +
Sbjct: 182 DVVVLGCTHFPLIKEEIEWCLPQVRLFIDSGKAIALRVKHLLSKIEVRSKKMEKNLIFCT 241
Query: 253 -SGKPDIAMRRLMQGFGLK 270
S ++ +R++ +G +
Sbjct: 242 QSFDDEVDFQRVLNFWGFE 260
>gi|291533966|emb|CBL07079.1| glutamate racemase [Megamonas hypermegale ART12/1]
Length = 270
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 61/260 (23%), Positives = 110/260 (42%), Gaps = 7/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ I +FDSG+GGL VL+++R L+P +FI+V D PYG+ + + F
Sbjct: 1 MDSNSPIGVFDSGLGGLTVLKELRRLLPHENFIFVGDSARAPYGSRTPEEIISF-LQQFM 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
D ++V ACNT + ++ S A + PAI A + + I +++T
Sbjct: 60 DYFQSRGVKMAVCACNTMTSYGYPVIKD-KTSFALVPMNPAIIPAVKASANKHIGVIATE 118
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+++ + Q + V +E I +D I + ++ + +
Sbjct: 119 ATIKKGMHKQAASNLDPQIKVFGVGCPKFVPLIET----GHIHDDAIDEAVQEYADKFKT 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDH 248
++L CTHYP+I V + V ++ + A+ A +L + N T+
Sbjct: 175 SDIHSLILGCTHYPIISEVLTKHFGKDVALINPALETAKDAATILTKNNLLNTQEQSGSL 234
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
L S K + + + G
Sbjct: 235 ELRFSAKQNNSEKMAEIILG 254
>gi|331655667|ref|ZP_08356659.1| glutamate racemase [Escherichia coli M718]
gi|12518894|gb|AAG59171.1|AE005628_7 glutamate racemase, required for biosynthesis of D-glutamate and
peptidoglycan [Escherichia coli O157:H7 str. EDL933]
gi|13364374|dbj|BAB38321.1| glutamate racemase [Escherichia coli O157:H7 str. Sakai]
gi|73857946|gb|AAZ90653.1| glutamate racemase [Shigella sonnei Ss046]
gi|81242998|gb|ABB63708.1| glutamate racemase [Shigella dysenteriae Sd197]
gi|81247728|gb|ABB68436.1| glutamate racemase [Shigella boydii Sb227]
gi|209751918|gb|ACI74266.1| UDP-N-acetylenolpyruvoylglucosamine reductase [Escherichia coli]
gi|209751920|gb|ACI74267.1| UDP-N-acetylenolpyruvoylglucosamine reductase [Escherichia coli]
gi|209751922|gb|ACI74268.1| UDP-N-acetylenolpyruvoylglucosamine reductase [Escherichia coli]
gi|209751924|gb|ACI74269.1| UDP-N-acetylenolpyruvoylglucosamine reductase [Escherichia coli]
gi|209751926|gb|ACI74270.1| UDP-N-acetylenolpyruvoylglucosamine reductase [Escherichia coli]
gi|331046768|gb|EGI18853.1| glutamate racemase [Escherichia coli M718]
Length = 289
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 82/260 (31%), Positives = 142/260 (54%), Gaps = 4/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + +
Sbjct: 25 RPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQ 84
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T+
Sbjct: 85 ERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTV 143
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R+YT LI + ++C I ++ S + E G + D +K+ + KE
Sbjct: 144 KRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP-- 201
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PL+ Q+ P +D+ +IARR LL + A +
Sbjct: 202 DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCM 261
Query: 253 SGKPD-IAMRRLMQGFGLKS 271
+ P+ + ++Q +G ++
Sbjct: 262 AMTPEAEQLLPVLQRYGFET 281
>gi|331675461|ref|ZP_08376211.1| glutamate racemase [Escherichia coli TA280]
gi|331067521|gb|EGI38926.1| glutamate racemase [Escherichia coli TA280]
Length = 289
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 82/260 (31%), Positives = 142/260 (54%), Gaps = 4/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + +
Sbjct: 25 RPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQ 84
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T+
Sbjct: 85 ERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTV 143
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R+YT LI + ++C I ++ S + E G + D +K+ + KE
Sbjct: 144 KRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP-- 201
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PL+ Q+ P +D+ +IARR LL + A +
Sbjct: 202 DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCM 261
Query: 253 SGKPD-IAMRRLMQGFGLKS 271
+ P+ + ++Q +G ++
Sbjct: 262 AMTPEAEQLLPVLQRYGFET 281
>gi|218701323|ref|YP_002408952.1| glutamate racemase [Escherichia coli IAI39]
gi|226722984|sp|B7NU33|MURI_ECO7I RecName: Full=Glutamate racemase
gi|218371309|emb|CAR19141.1| glutamate racemase [Escherichia coli IAI39]
Length = 285
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 82/260 (31%), Positives = 141/260 (54%), Gaps = 4/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + +
Sbjct: 21 RPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQ 80
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T+
Sbjct: 81 KRYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTV 139
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R+YT LI + ++C I ++ S + E G + D +K+ + KE
Sbjct: 140 KRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP-- 197
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PL+ Q+ P +D+ +IARR LL + A +
Sbjct: 198 DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCM 257
Query: 253 SGKPD-IAMRRLMQGFGLKS 271
+ P+ + ++Q +G ++
Sbjct: 258 AMTPEAEQLLPVLQRYGFET 277
>gi|194290129|ref|YP_002006036.1| glutamate racemase [Cupriavidus taiwanensis LMG 19424]
gi|193223964|emb|CAQ69973.1| GLUTAMATE RACEMASE PROTEIN [Cupriavidus taiwanensis LMG 19424]
Length = 269
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 62/258 (24%), Positives = 110/258 (42%), Gaps = 8/258 (3%)
Query: 12 LQ-NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ I +FDSG+GGL VL+++R L+P +Y+AD PYG +H ++ R +
Sbjct: 1 MNLAPIGVFDSGLGGLSVLREIRALLPHEPLLYLADSKYAPYGEKPEHFVEARTLQACEW 60
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ VIACNTA LR P + +G P +K AAA + S ++ +L+T
Sbjct: 61 MI-GQGCKALVIACNTATGHAVALLRERLP-VPIIGVEPGLKPAAAASISKVVGVLATAN 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TL+ + L+ S + + + L + VE+ ++ +++ +E
Sbjct: 119 TLKSAKFARLLASLDGESRFLCQAGLGLVTLVEQ----GQLDGPAVRERLEAYLKPMLDA 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-A 249
D +VL CTHYP + R ++ + +D ++AR+ L H
Sbjct: 175 GADTLVLGCTHYPFLEGAIRAIAGDRLALVDTGIAVARQLARKLDEHALAALPGAAGHDR 234
Query: 250 LFLSGKPDIAMRRLMQGF 267
+ +
Sbjct: 235 FLSTKDAAHLRAMVAALL 252
>gi|322515537|ref|ZP_08068520.1| glutamate racemase [Actinobacillus ureae ATCC 25976]
gi|322118406|gb|EFX90666.1| glutamate racemase [Actinobacillus ureae ATCC 25976]
Length = 265
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 76/261 (29%), Positives = 134/261 (51%), Gaps = 6/261 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +IL++DSG+GGL + +R +P H++Y D+ FPY ++ L ++ + + I
Sbjct: 1 MKPTILLYDSGMGGLTIYDAIRQTLPNAHYLYCFDNAYFPYSERSENVLIEQAVKIVQKI 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+KY + V+ACNTA T++ LR F + +G VPAIK AA +++ I +L+T T
Sbjct: 61 AEKYPLDMVVVACNTASTVVLPALREKF-AFPIVGTVPAIKPAAVVSETKTIGLLATKGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R Y + LI Y C + + S L VEE ++ ++++ + I
Sbjct: 120 VERPYVAELIEKYAKDCVVEKIGSTTLVELVEEKIRTGQVDQEQLGEVITEWQTH---PT 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTH+PL+ +QL P ++D + IA R LL + + ++ F
Sbjct: 177 LDTVILGCTHFPLVKQELQQLLPNVKYFIDPGNGIANRVSDLLSEFSQENSAQNRENIAF 236
Query: 252 LSGKPDIAMRR--LMQGFGLK 270
+ + +R +MQ +G K
Sbjct: 237 CTKMDEEFSKREVIMQQWGFK 257
>gi|293413408|ref|ZP_06656069.1| glutamate racemase [Escherichia coli B354]
gi|291468156|gb|EFF10654.1| glutamate racemase [Escherichia coli B354]
Length = 289
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 82/260 (31%), Positives = 142/260 (54%), Gaps = 4/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + +
Sbjct: 25 RPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQ 84
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T+
Sbjct: 85 ERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTV 143
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R+YT LI + ++C I ++ S + E G + D +K+ + KE
Sbjct: 144 KRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEGVSLDALKRILRPWLRMKEPP-- 201
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PL+ Q+ P +D+ +IARR LL + A +
Sbjct: 202 DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCM 261
Query: 253 SGKPD-IAMRRLMQGFGLKS 271
+ P+ + ++Q +G ++
Sbjct: 262 AMTPEAEQLLPVLQRYGFET 281
>gi|254360933|ref|ZP_04977079.1| glutamate racemase [Mannheimia haemolytica PHL213]
gi|261492190|ref|ZP_05988760.1| glutamate racemase [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|261494308|ref|ZP_05990803.1| glutamate racemase [Mannheimia haemolytica serotype A2 str. OVINE]
gi|153092412|gb|EDN73475.1| glutamate racemase [Mannheimia haemolytica PHL213]
gi|261310038|gb|EEY11246.1| glutamate racemase [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261312170|gb|EEY13303.1| glutamate racemase [Mannheimia haemolytica serotype A2 str. BOVINE]
Length = 263
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 79/261 (30%), Positives = 136/261 (52%), Gaps = 5/261 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +IL++DSG+GGL + ++R ++P H++Y D+ FPY + L +R + + I
Sbjct: 1 MKPTILLYDSGMGGLTIYDEIRKVLPHAHYLYCFDNAFFPYSEKSEAVLIERAVKIVQKI 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+K + V+ACNTA T++ LR F + +G VPAIK AAA +++ +I +L+T T
Sbjct: 61 AEKQPLDMVVVACNTASTVVLPALREHF-NFPIVGTVPAIKPAAAISETKVIGLLATKGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R Y LI Y C + + + L VEE K+ + ++K +E + E
Sbjct: 120 VARPYVDELIRKYAQDCTVEKIGTTDLVEIVEEKQRSGKVDMNRLQKVVEAWQGKPE--- 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTH+PL+ +QL P ++D IA+R LL Q F++ A
Sbjct: 177 LDTVILGCTHFPLVKAELQQLLPDVKYFVDPGVGIAKRVLSLLEERKFQQKADFENQAFC 236
Query: 252 LSGKPDIAMRR-LMQGFGLKS 271
+++ +MQ +G +
Sbjct: 237 TKQSSAFNIKQDVMQNWGFNN 257
>gi|110807826|ref|YP_691346.1| glutamate racemase [Shigella flexneri 5 str. 8401]
gi|161367471|ref|NP_290606.2| glutamate racemase [Escherichia coli O157:H7 EDL933]
gi|161485830|ref|NP_709771.3| glutamate racemase [Shigella flexneri 2a str. 301]
gi|161486412|ref|NP_838913.2| glutamate racemase [Shigella flexneri 2a str. 2457T]
gi|161950019|ref|YP_405199.2| glutamate racemase [Shigella dysenteriae Sd197]
gi|161984807|ref|YP_410264.2| glutamate racemase [Shigella boydii Sb227]
gi|161986399|ref|YP_312888.2| glutamate racemase [Shigella sonnei Ss046]
gi|162139734|ref|NP_312925.2| glutamate racemase [Escherichia coli O157:H7 str. Sakai]
gi|254795974|ref|YP_003080811.1| glutamate racemase [Escherichia coli O157:H7 str. TW14359]
gi|261226407|ref|ZP_05940688.1| glutamate racemase [Escherichia coli O157:H7 str. FRIK2000]
gi|261256807|ref|ZP_05949340.1| glutamate racemase [Escherichia coli O157:H7 str. FRIK966]
gi|291285389|ref|YP_003502207.1| Glutamate racemase [Escherichia coli O55:H7 str. CB9615]
gi|293417477|ref|ZP_06660101.1| glutamate racemase [Escherichia coli B185]
gi|54037865|sp|P63634|MURI_SHIFL RecName: Full=Glutamate racemase
gi|54041258|sp|P63633|MURI_ECO57 RecName: Full=Glutamate racemase
gi|123342230|sp|Q0SY24|MURI_SHIF8 RecName: Full=Glutamate racemase
gi|110617374|gb|ABF06041.1| glutamate racemase [Shigella flexneri 5 str. 8401]
gi|254595374|gb|ACT74735.1| glutamate racemase [Escherichia coli O157:H7 str. TW14359]
gi|281603361|gb|ADA76345.1| putative Glutamate racemase [Shigella flexneri 2002017]
gi|290765262|gb|ADD59223.1| Glutamate racemase [Escherichia coli O55:H7 str. CB9615]
gi|291430997|gb|EFF03993.1| glutamate racemase [Escherichia coli B185]
gi|320639143|gb|EFX08779.1| glutamate racemase [Escherichia coli O157:H7 str. G5101]
gi|320644535|gb|EFX13596.1| glutamate racemase [Escherichia coli O157:H- str. 493-89]
gi|320649859|gb|EFX18374.1| glutamate racemase [Escherichia coli O157:H- str. H 2687]
gi|320655208|gb|EFX23157.1| glutamate racemase [Escherichia coli O55:H7 str. 3256-97 TW 07815]
gi|320660833|gb|EFX28283.1| glutamate racemase [Escherichia coli O55:H7 str. USDA 5905]
gi|320665951|gb|EFX32977.1| glutamate racemase [Escherichia coli O157:H7 str. LSU-61]
Length = 285
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 82/260 (31%), Positives = 142/260 (54%), Gaps = 4/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + +
Sbjct: 21 RPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQ 80
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T+
Sbjct: 81 ERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTV 139
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R+YT LI + ++C I ++ S + E G + D +K+ + KE
Sbjct: 140 KRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP-- 197
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PL+ Q+ P +D+ +IARR LL + A +
Sbjct: 198 DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCM 257
Query: 253 SGKPD-IAMRRLMQGFGLKS 271
+ P+ + ++Q +G ++
Sbjct: 258 AMTPEAEQLLPVLQRYGFET 277
>gi|215489308|ref|YP_002331739.1| glutamate racemase [Escherichia coli O127:H6 str. E2348/69]
gi|215267380|emb|CAS11831.1| glutamate racemase MurI [Escherichia coli O127:H6 str. E2348/69]
Length = 285
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 82/260 (31%), Positives = 141/260 (54%), Gaps = 4/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + +
Sbjct: 21 RPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQ 80
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T+
Sbjct: 81 KRYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTV 139
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R+YT LI + ++C I ++ S + E G + D +K+ + KE
Sbjct: 140 KRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP-- 197
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PL+ Q+ P +D+ +IARR LL + A +
Sbjct: 198 DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCM 257
Query: 253 SGKPD-IAMRRLMQGFGLKS 271
+ P+ + ++Q +G ++
Sbjct: 258 AMTPEAEQLLPVLQRYGFET 277
>gi|332665127|ref|YP_004447915.1| glutamate racemase [Haliscomenobacter hydrossis DSM 1100]
gi|332333941|gb|AEE51042.1| Glutamate racemase [Haliscomenobacter hydrossis DSM 1100]
Length = 267
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 57/259 (22%), Positives = 99/259 (38%), Gaps = 6/259 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
I +FDSGIGGL V + +P IY D PYG+ A++ + + S
Sbjct: 3 TASQPIGVFDSGIGGLTVANAIVKKLPNEEIIYFGDTAHLPYGDKSADAIRYYCLRI-SK 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMA-FLGAVPAIKQAAAYTQSGLISILSTP 129
L + V+ACN+A + D L F A F+ V + A A + +++T
Sbjct: 62 FLLDQGCKMIVVACNSASSAGYDVLLEFFRDQALFVNVVDPLVSAVAKRGFDKVGVIATK 121
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT++ +H ++ +++ +LA +E + K ++
Sbjct: 122 ATVQSGIYHKQLHRVSPTLNVESLATPLLAPMIE----EGFVHNQASKAILDMYLAHPGF 177
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+ ++LACTHYPLI V+ D++ +A L + H
Sbjct: 178 VDIEALLLACTHYPLIRPEIDDYFQHQVEVFDSTRVVAEEVAFKLAQNGLLNPEKQHPHR 237
Query: 250 LFLSGKPDIAMRRLMQGFG 268
++S +G
Sbjct: 238 FYVSDYTKSFEETTRLFYG 256
>gi|162453120|ref|YP_001615487.1| glutamate racemase [Sorangium cellulosum 'So ce 56']
gi|161163702|emb|CAN95007.1| glutamate racemase [Sorangium cellulosum 'So ce 56']
Length = 309
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 54/261 (20%), Positives = 99/261 (37%), Gaps = 10/261 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +FDSG+GGL V++ +R P +Y+ D PYG + + + + +L
Sbjct: 6 DAPLGVFDSGLGGLTVVRALRRRCPAEDIVYLGDTARVPYGTRSPETVVRYALG-CARVL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
V+ACNT + D LR +P + A A ++ I +L T T+
Sbjct: 65 IGRGVKAIVVACNTVSAVAIDMLRVELDLPVLGVILPGARAAVAASRGATIGVLGTAGTI 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ S ++ + ++ +L S EE ++ ++ G
Sbjct: 125 ASGAYPRAVASLSTRTEVAGQAAPLLVSLAEEGWLEGEVPRLVARR----YLEPLIGAGA 180
Query: 193 DVIVLACTHYPLIVHVFRQ----LSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-D 247
IVL CTH+PL+ L+ P+ +D++ + A L +R
Sbjct: 181 RSIVLGCTHFPLLRAAIEAETASLAGGPLPIVDSASATAEEVASFLAERGLATSRSTPGG 240
Query: 248 HALFLSGKPDIAMRRLMQGFG 268
+L ++ P + G
Sbjct: 241 LSLLVTDLPKSFATVAARFLG 261
>gi|298386827|ref|ZP_06996382.1| glutamate racemase [Bacteroides sp. 1_1_14]
gi|298260501|gb|EFI03370.1| glutamate racemase [Bacteroides sp. 1_1_14]
Length = 280
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 57/261 (21%), Positives = 108/261 (41%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L K+R +PEY +IY+ D+ PYG + + + + L +
Sbjct: 11 PIGVFDSGYGGLTILNKIREALPEYDYIYLGDNARTPYGTRSFEIVYEFTLQAVNK-LFE 69
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ACNTA + ++L P LG + P ++ TQS I +L+T
Sbjct: 70 MGCHLVILACNTASAKALRSIQMNDLPGIDPERRVLGVIRPTVECIGDITQSRHIGVLAT 129
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ IH + ++ + VE + + I+K I+ +
Sbjct: 130 AGTIKSESYPLEIHKLFPDIQVSGIACPMWVPLVENNESQNEGADYFIRKYIDQLLS--K 187
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFD 246
D ++L CTHYP+++ ++ +P + + + +A + L R +
Sbjct: 188 DPEIDTMILGCTHYPILLPKIQEYTPKHIRIVAQGEYVAESLKDYLSRHPEMNAKCTKNG 247
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ + + +
Sbjct: 248 SCLFYTTEAEEKFVESASSFL 268
>gi|260553350|ref|ZP_05825964.1| glutamate racemase [Acinetobacter sp. RUH2624]
gi|260405187|gb|EEW98685.1| glutamate racemase [Acinetobacter sp. RUH2624]
Length = 266
Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats.
Identities = 62/259 (23%), Positives = 119/259 (45%), Gaps = 6/259 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
N I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+
Sbjct: 3 NKNNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSRYVPYGDRESDWIVSRTTHLISN 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ + + V+ACNT + + +R+ ++ + PA+K A A T S I++L+T
Sbjct: 63 LVAQGKCKAIVVACNTMTAVAIETIRAQI-NVPLIAIEPAVKPAVAMTVSKHIAVLATAT 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ +LI +Y + LV + LA ++E E+K ++ +
Sbjct: 122 TVKGKNLKSLIETYAQDIKVSLVPCIGLAEKIETGKA----HTAEVKDYLKNILAPLVEQ 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHA 249
+ D I+L CTHYP + +++ + ++ S+++ + L + + ++ +H
Sbjct: 178 KVDTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLSSESPNEGNHI 237
Query: 250 LFLSGKPDIAMRRLMQGFG 268
++ S P G
Sbjct: 238 IWTSSDPLEVADVTFSLLG 256
>gi|239815499|ref|YP_002944409.1| glutamate racemase [Variovorax paradoxus S110]
gi|239802076|gb|ACS19143.1| glutamate racemase [Variovorax paradoxus S110]
Length = 269
Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats.
Identities = 67/256 (26%), Positives = 119/256 (46%), Gaps = 1/256 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + + +FDSG+GGL VL +R +P F+Y AD PYG D + +R + +
Sbjct: 1 MNHPVGVFDSGVGGLSVLAALRAELPHERFVYFADTAFAPYGERGDAYVIERSRKVAEQL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ ++ V+ACNTA T LR+ P++ +G PA+K A A +++G I++++T T
Sbjct: 61 MAEHGIKALVVACNTATTAAIHLLRAEHPALPIVGLEPALKPAVATSRTGHIAVMATRGT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L + L S+ ++ V L +E + I E + E + +
Sbjct: 121 LASAKYAALRDSFAGTANVRAVPCDGLVKAIEGFDTA-AITELCARYMAEAGPLGDGPGQ 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTHYPL+ + ++ +P + ++D +A++AR +L + L
Sbjct: 180 VDTVVLGCTHYPLVKNELQRHAPPALRFIDTGAPVAQQARRVLASLGRLAPSGEGGLVLQ 239
Query: 252 LSGKPDIAMRRLMQGF 267
SG +
Sbjct: 240 GSGDAAVLEAAAAHWL 255
>gi|330838748|ref|YP_004413328.1| Glutamate racemase [Selenomonas sputigena ATCC 35185]
gi|329746512|gb|AEB99868.1| Glutamate racemase [Selenomonas sputigena ATCC 35185]
Length = 283
Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats.
Identities = 60/260 (23%), Positives = 108/260 (41%), Gaps = 6/260 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ K + I +FDSG+GG+ VL+++ L+P+ FIY D PYG + ++
Sbjct: 27 DVKKEQPIGVFDSGLGGISVLRELVSLLPKEDFIYFGDAAHAPYGERTEREIRALTTAQI 86
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ + V+ACNTA + LR + + +G PA+K A + + +++T
Sbjct: 87 DRMAAE-GVKAVVLACNTATSAACAPLRRRYRQIPIIGMEPALKPAILSGEKPRVVVMAT 145
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
ATLR+ + L+ + I + + VE I+ + + +E F+
Sbjct: 146 HATLRQKKFARLMERFKDAGEIVKLPCPEIVEFVERGE----IRSAALHEYLEERFLSVS 201
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR-CLLPRINTHQTRVFDD 247
K D +VL CTH+P + + + V D + AR + LL ++
Sbjct: 202 QKPIDCVVLGCTHFPFVRDAIQDVVGQAVQIFDGAAGTARELKRRLLEADALRESGQKGA 261
Query: 248 HALFLSGKPDIAMRRLMQGF 267
S + R +
Sbjct: 262 IEWLSSSSDPNYIERAKMLY 281
>gi|300714768|ref|YP_003739571.1| glutamate racemase [Erwinia billingiae Eb661]
gi|299060604|emb|CAX57711.1| Glutamate racemase [Erwinia billingiae Eb661]
Length = 260
Score = 219 bits (559), Expect = 3e-55, Method: Composition-based stats.
Identities = 80/256 (31%), Positives = 138/256 (53%), Gaps = 6/256 (2%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V +++R LMP+ H++Y D+V FPYG + + R++ + + +Y
Sbjct: 2 LVFDSGVGGLSVYEELRQLMPDLHYLYAFDNVAFPYGEKSEEFIVHRVVDIVEAVTRRYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L VIACN+A T+ LR+ F +G VPAIK AA T++G++ +L+T T++R Y
Sbjct: 62 LALVVIACNSASTVTLPALRARF-DFPVVGVVPAIKPAARLTRNGIVGLLATRGTVKRPY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T L+ + S+C ++ S L E G + +E+++ ++ KE D +V
Sbjct: 121 THELVARFASECKTEMLGSAELVELAEAKLQGKPVPLEEVRRILQPWLRMKEPP--DTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ +Q+ P +D+ +IARR LL + + A +
Sbjct: 179 LGCTHFPLLNEELQQVLPEGTRLVDSGAAIARRTAWLLENESPAAFSADSNIAFCM-DIT 237
Query: 257 DIA--MRRLMQGFGLK 270
+ A + +++ +G +
Sbjct: 238 EQAVQLMPVLKRYGFE 253
>gi|325068394|ref|ZP_08127067.1| glutamate racemase [Actinomyces oris K20]
Length = 287
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 54/257 (21%), Positives = 97/257 (37%), Gaps = 12/257 (4%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V + + +P+ +Y+ D PYG + ++ + + + L
Sbjct: 1 MFDSGVGGLTVARSVLDQLPQEQVLYIGDTANSPYGPRDIAEVRSLALGIMDE-LVDRGV 59
Query: 78 VLSVIACNTAFTLIKDELRSTFP----SMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
L VIACNTA + + R + PA + AA T++G + +++T T+
Sbjct: 60 KLLVIACNTASAAVLHDARERYTLGRGVPVIEVIHPAARTAARVTRNGKVGLIATRGTVD 119
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + + + + E E+ E + D
Sbjct: 120 SRAYDDALQAV-PGVELVSQACPRFVELAERGVT----TGPEVLDVAEEYLAPIKAAGVD 174
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFDDHALF 251
++L CTHYPL+V + V + +SD A+ L N + H
Sbjct: 175 TLILGCTHYPLLVGPISYVMGRDVTLVTSSDETAKDVYRALAGKNLLRGPDAPEPHHDFA 234
Query: 252 LSGKPDIAMRRLMQGFG 268
+G P+ + G
Sbjct: 235 STGDPEAFSVLARRFLG 251
>gi|308235626|ref|ZP_07666363.1| glutamate racemase [Gardnerella vaginalis ATCC 14018]
gi|311114374|ref|YP_003985595.1| glutamate racemase [Gardnerella vaginalis ATCC 14019]
gi|310945868|gb|ADP38572.1| glutamate racemase [Gardnerella vaginalis ATCC 14019]
Length = 260
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 60/255 (23%), Positives = 102/255 (40%), Gaps = 7/255 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG+ V++++R MP IY D PYG +++ +
Sbjct: 6 PIGVFDSGLGGISVVRELREAMPNERIIYFGDSANAPYGIKTPQEVRELSFKIVE-HFAS 64
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--STPATL 132
VIACNTA + +LR + SM +G PA+K A ++ +TP TL
Sbjct: 65 LNVKAIVIACNTATSAAVKDLREHY-SMPIIGMEPALKLACDLGGGKPQRVIVAATPLTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L++ + I L VE G ++ + + F +
Sbjct: 124 KERKFAELMNRFTQDHQIFSRPCPDLVEIVENGDLG---NKNIVMSALHKYFDSYDLNNI 180
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+ FR+ P V +D + + +L +N + + L
Sbjct: 181 DSVVLGCTHFVFYKSYFREFLPDCVKIVDGNAGTIHHLKSVLDSMNLLADKDDEGSVLLT 240
Query: 253 SGKPDIAMRRLMQGF 267
+ + +L Q
Sbjct: 241 NSDSSDRIAKLSQSL 255
>gi|260887883|ref|ZP_05899146.1| glutamate racemase [Selenomonas sputigena ATCC 35185]
gi|260862389|gb|EEX76889.1| glutamate racemase [Selenomonas sputigena ATCC 35185]
Length = 281
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 60/260 (23%), Positives = 108/260 (41%), Gaps = 6/260 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ K + I +FDSG+GG+ VL+++ L+P+ FIY D PYG + ++
Sbjct: 25 DVKKEQPIGVFDSGLGGISVLRELVSLLPKEDFIYFGDAAHAPYGERTEREIRALTTAQI 84
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ + V+ACNTA + LR + + +G PA+K A + + +++T
Sbjct: 85 DRMAAE-GVKAVVLACNTATSAACAPLRRRYRQIPIIGMEPALKPAILSGEKPRVVVMAT 143
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
ATLR+ + L+ + I + + VE I+ + + +E F+
Sbjct: 144 HATLRQKKFARLMERFKDAGEIVKLPCPEIVEFVERGE----IRSAALHEYLEERFLSVS 199
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR-CLLPRINTHQTRVFDD 247
K D +VL CTH+P + + + V D + AR + LL ++
Sbjct: 200 QKPIDCVVLGCTHFPFVRDAIQDVVGQAVQIFDGAAGTARELKRRLLEADALRESGQKGA 259
Query: 248 HALFLSGKPDIAMRRLMQGF 267
S + R +
Sbjct: 260 IEWLSSSSDPNYIERAKMLY 279
>gi|32035119|ref|ZP_00135171.1| COG0796: Glutamate racemase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|126209303|ref|YP_001054528.1| glutamate racemase [Actinobacillus pleuropneumoniae L20]
gi|303251132|ref|ZP_07337316.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|307253526|ref|ZP_07535396.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|166231024|sp|A3N3D7|MURI_ACTP2 RecName: Full=Glutamate racemase
gi|126098095|gb|ABN74923.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 5b str.
L20]
gi|302649983|gb|EFL80155.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|306859027|gb|EFM91070.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
Length = 265
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 78/261 (29%), Positives = 132/261 (50%), Gaps = 6/261 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +IL++DSG+GGL + +R +P H++Y D+ FPY ++ L ++ + + I
Sbjct: 1 MKPTILLYDSGMGGLTIYDAIRQTLPNAHYLYCFDNAYFPYSERSENVLIEQAVKIVQKI 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+KY + V+ACNTA T++ LR F + +G VPAIK AAA +Q+ I +L+T T
Sbjct: 61 AEKYPLDMVVVACNTASTVVLPALREKF-AFPIVGTVPAIKPAAAISQTKTIGLLATKGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R Y + LI Y C + + + L VEE + +D + K +
Sbjct: 120 VERPYVAELIEKYAKDCIVEKIGTTTLVELVEEKIRTGNVDQDRLSKVVAEWQTH---PT 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTH+PL+ +QL P ++D + IA R LL + ++ F
Sbjct: 177 LDTVILGCTHFPLVKQELQQLLPNVKYFIDPGNGIANRVSALLSESVPEEPEQNKENIAF 236
Query: 252 LSGKPDIAMRR--LMQGFGLK 270
+ + +R +MQ +G K
Sbjct: 237 CTKIDEEFFKREVIMQQWGFK 257
>gi|253571293|ref|ZP_04848700.1| glutamate racemase [Bacteroides sp. 1_1_6]
gi|251839246|gb|EES67330.1| glutamate racemase [Bacteroides sp. 1_1_6]
Length = 280
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 57/261 (21%), Positives = 108/261 (41%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L K+R +PEY +IY+ D+ PYG + + + + L +
Sbjct: 11 PIGVFDSGYGGLTILNKIREALPEYDYIYLGDNARTPYGTRSFEIVYEFTLQAVNK-LFE 69
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ACNTA + ++L P LG + P ++ TQS I +L+T
Sbjct: 70 MGCHLVILACNTASAKALRSIQMNDLPGIDPERRVLGVIRPTVECIGDITQSRHIGVLAT 129
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ IH + ++ + VE + + I+K I+ +
Sbjct: 130 AGTIKSESYPLEIHKLFPDIQVSGIACPMWVPLVENNESQNEGADYFIRKYIDQLLS--K 187
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFD 246
D ++L CTHYP+++ ++ +P + + + +A + L R +
Sbjct: 188 DPEIDTMILGCTHYPILLPKIQKYTPKHIRIVAQGEYVAESLKDYLSRHPEMNAKCTQNG 247
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ + + +
Sbjct: 248 SCLFYTTEAEEKFVESASSFL 268
>gi|27380813|ref|NP_772342.1| glutamate racemase [Bradyrhizobium japonicum USDA 110]
gi|27353978|dbj|BAC50967.1| glutamate racemase [Bradyrhizobium japonicum USDA 110]
Length = 265
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 105/264 (39%), Positives = 150/264 (56%), Gaps = 9/264 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+IL+FDSG+GGL VL+++ P+ H++YVADD FPYG+ + + R++ L
Sbjct: 1 MTNSPTILVFDSGLGGLTVLREVVATRPDAHYVYVADDAFFPYGHHSEDEIIARVVPLMG 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+++ + P L VIACNTA TL+ LR+ + S+ F+G VPAIK A A ++S +S+L T
Sbjct: 61 ELIGTHDPDLVVIACNTASTLVLSHLRTAY-SLPFVGTVPAIKPACAQSKSRRVSVLGTK 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF---IE 186
T++R YT LI + C + LV S LAS E G I +D+I E+ CF
Sbjct: 120 GTVKREYTKALIRDFAQGCEVTLVGSPELASLAERALGGHPISDDDILAELTPCFVGDAA 179
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI--NTHQTRV 244
G RTD +VLACTHYPL++ +L+PWPVDW+D + +IARR LL Q+
Sbjct: 180 DAGARTDTVVLACTHYPLLLDRLTRLAPWPVDWIDPAPAIARRVSDLLGPAIGGIMQSGA 239
Query: 245 FDDHALFLSGKPDIAMRRLMQGFG 268
+F S + L FG
Sbjct: 240 E---MIFTSNRVHDLSATLTPFFG 260
>gi|254231591|ref|ZP_04924918.1| glutamate racemase murI [Mycobacterium tuberculosis C]
gi|124600650|gb|EAY59660.1| glutamate racemase murI [Mycobacterium tuberculosis C]
Length = 236
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 52/233 (22%), Positives = 97/233 (41%), Gaps = 6/233 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ +FDSG+GGL V + + +P+ +YV D PYG ++ + + D L
Sbjct: 7 PVGVFDSGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTIPEIRAHALAIGDD-LVG 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
VIACN+A + + R + +PA+++A A T++G I ++ T AT+
Sbjct: 66 RGVKALVIACNSASSACLRDARERYQVPVVEVILPAVRRAVAATRNGRIGVIGTRATITS 125
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + I V+ VE + ++ +G + D
Sbjct: 126 HAYQDAFAA-ARDTEITAVACPRFVDFVERGVTSGR----QVLGLAQGYLEPLQRAEVDT 180
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+VL CTHYPL+ + + V + +++ A+ +L I+ +
Sbjct: 181 LVLGCTHYPLLSGLIQLAMGENVTLVSSAEETAKEVVRVLTEIDLLRPHDAPP 233
>gi|332676074|gb|AEE72890.1| glutamate racemase [Propionibacterium acnes 266]
Length = 297
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 104/260 (40%), Gaps = 8/260 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + I IFDSG GGL V + + LMP +Y+ D PYG +++ +
Sbjct: 22 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRQYALQCLDR- 80
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + +IACNTA + + + R + +PA ++A+A T++G I ++ T AT
Sbjct: 81 LVAHGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVICTEAT 140
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
R + + + + + VE+ E++ +
Sbjct: 141 ARSLSYEDALAAV-PGITLTTQACPKFVPFVEDGITSG----PELETIAREYLAPIQEAG 195
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ + + V + +S AR + L+ + D F
Sbjct: 196 CDTLILGCTHYPLLAGLISYVLGDGVTLISSSQQCARASYSLMAESGLLHSHPRDSSRYF 255
Query: 252 -LSGKPDIAMRRLMQGF-GL 269
+G + + + G
Sbjct: 256 LTTGNAERFEKLGRRLMEGF 275
>gi|289427817|ref|ZP_06429526.1| glutamate racemase [Propionibacterium acnes J165]
gi|295131197|ref|YP_003581860.1| glutamate racemase [Propionibacterium acnes SK137]
gi|289158999|gb|EFD07194.1| glutamate racemase [Propionibacterium acnes J165]
gi|291377076|gb|ADE00931.1| glutamate racemase [Propionibacterium acnes SK137]
gi|313773262|gb|EFS39228.1| glutamate racemase [Propionibacterium acnes HL074PA1]
gi|313793455|gb|EFS41506.1| glutamate racemase [Propionibacterium acnes HL110PA1]
gi|313801146|gb|EFS42409.1| glutamate racemase [Propionibacterium acnes HL110PA2]
gi|313808495|gb|EFS46960.1| glutamate racemase [Propionibacterium acnes HL087PA2]
gi|313812068|gb|EFS49782.1| glutamate racemase [Propionibacterium acnes HL083PA1]
gi|313819230|gb|EFS56944.1| glutamate racemase [Propionibacterium acnes HL046PA2]
gi|313821098|gb|EFS58812.1| glutamate racemase [Propionibacterium acnes HL036PA1]
gi|313823476|gb|EFS61190.1| glutamate racemase [Propionibacterium acnes HL036PA2]
gi|313827021|gb|EFS64735.1| glutamate racemase [Propionibacterium acnes HL063PA1]
gi|313829865|gb|EFS67579.1| glutamate racemase [Propionibacterium acnes HL007PA1]
gi|313834707|gb|EFS72421.1| glutamate racemase [Propionibacterium acnes HL056PA1]
gi|313837924|gb|EFS75638.1| glutamate racemase [Propionibacterium acnes HL086PA1]
gi|314925917|gb|EFS89748.1| glutamate racemase [Propionibacterium acnes HL036PA3]
gi|314960892|gb|EFT04993.1| glutamate racemase [Propionibacterium acnes HL002PA2]
gi|314963344|gb|EFT07444.1| glutamate racemase [Propionibacterium acnes HL082PA1]
gi|314974021|gb|EFT18117.1| glutamate racemase [Propionibacterium acnes HL053PA1]
gi|314975447|gb|EFT19542.1| glutamate racemase [Propionibacterium acnes HL045PA1]
gi|314979454|gb|EFT23548.1| glutamate racemase [Propionibacterium acnes HL072PA2]
gi|314988438|gb|EFT32529.1| glutamate racemase [Propionibacterium acnes HL005PA2]
gi|314988643|gb|EFT32734.1| glutamate racemase [Propionibacterium acnes HL005PA3]
gi|315083402|gb|EFT55378.1| glutamate racemase [Propionibacterium acnes HL027PA2]
gi|315086803|gb|EFT58779.1| glutamate racemase [Propionibacterium acnes HL002PA3]
gi|315089450|gb|EFT61426.1| glutamate racemase [Propionibacterium acnes HL072PA1]
gi|315097779|gb|EFT69755.1| glutamate racemase [Propionibacterium acnes HL038PA1]
gi|327325396|gb|EGE67201.1| glutamate racemase [Propionibacterium acnes HL096PA2]
gi|327328265|gb|EGE70029.1| glutamate racemase [Propionibacterium acnes HL096PA3]
gi|327443689|gb|EGE90343.1| glutamate racemase [Propionibacterium acnes HL043PA1]
gi|327449226|gb|EGE95880.1| glutamate racemase [Propionibacterium acnes HL043PA2]
gi|327450180|gb|EGE96834.1| glutamate racemase [Propionibacterium acnes HL013PA2]
gi|327451244|gb|EGE97898.1| glutamate racemase [Propionibacterium acnes HL092PA1]
gi|328756764|gb|EGF70380.1| glutamate racemase [Propionibacterium acnes HL020PA1]
gi|328761038|gb|EGF74590.1| glutamate racemase [Propionibacterium acnes HL099PA1]
Length = 284
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 104/260 (40%), Gaps = 8/260 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + I IFDSG GGL V + + LMP +Y+ D PYG +++ +
Sbjct: 9 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRQYALQCLDR- 67
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + +IACNTA + + + R + +PA ++A+A T++G I ++ T AT
Sbjct: 68 LVAHGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVICTEAT 127
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
R + + + + + VE+ E++ +
Sbjct: 128 ARSLSYEDALAAV-PGITLTTQACPKFVPFVEDGITSG----PELETIAREYLAPIQEAG 182
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ + + V + +S AR + L+ + D F
Sbjct: 183 CDTLILGCTHYPLLAGLISYVLGDGVTLISSSQQCARASYSLMAESGLLHSHPRDSSRYF 242
Query: 252 -LSGKPDIAMRRLMQGF-GL 269
+G + + + G
Sbjct: 243 LTTGNAERFEKLGRRLMEGF 262
>gi|52842520|ref|YP_096319.1| glutamate racemase [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|52629631|gb|AAU28372.1| glutamate racemase [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
Length = 288
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 62/271 (22%), Positives = 110/271 (40%), Gaps = 10/271 (3%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M + +I +FDSG+GGL VL+ +R +P F+Y+ D PYG +
Sbjct: 10 MTRRSNQLNSNKDLAIGVFDSGMGGLTVLRALRDKLPHESFVYLGDTARLPYGTKSPDTV 69
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF-LGAVPAIKQAAAYTQ 119
K+ M + IL + + VIACNTA T L+S + P A + T+
Sbjct: 70 KQYAMQ-MAKILVERRIKALVIACNTATTAALPHLQSMLTDIPVLGVVAPGAAAAVSATK 128
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+ I++L+T T+ +LI + + + + +L + EE + + +K
Sbjct: 129 NHRIAVLATETTIASRAYHDLIIKNLPEAVVSSRACSVLVALAEEGMVTNAVAREALKHY 188
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
++ D ++L CTH+P+ + L P V +D++ + A LL N
Sbjct: 189 LDDF------SDEDAVLLGCTHFPVFKPLLSSLLPKDVAIVDSAQATAISLYELLQNQNL 242
Query: 240 HQTR--VFDDHALFLSGKPDIAMRRLMQGFG 268
H ++ + + G
Sbjct: 243 HNDNLEAPPRINYLVTDSINRFQKVGEIFLG 273
>gi|20807679|ref|NP_622850.1| glutamate racemase [Thermoanaerobacter tengcongensis MB4]
gi|24418564|sp|Q8RAJ0|MURI3_THETN RecName: Full=Glutamate racemase 3
gi|20516226|gb|AAM24454.1| Glutamate racemase [Thermoanaerobacter tengcongensis MB4]
Length = 271
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 56/254 (22%), Positives = 106/254 (41%), Gaps = 10/254 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GGL VL+++ ++P+ +++Y D PYG+ +K + + L K
Sbjct: 10 PIGVFDSGVGGLTVLKRLMEVLPQENYVYFGDTRRVPYGDRSKEEIKAFTKQIMN-FLKK 68
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ VIACNT + + E + + F +K A T + I ++ T T
Sbjct: 69 KNVKIFVIACNTISAVFEKEGKE----IVFNVVEAGVKSAVETTCNKRIGVIGTRRTTEE 124
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
SN I ++ V+ L +E+ + +K+ + C + ++ D
Sbjct: 125 RIYSNKIKEINKSIEVYEVACPELVPLIEKGFYK----TESVKRVVIECVKNLKEEKIDT 180
Query: 195 IVLACTHYPLIVHVFRQLS-PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTHYP+++ + V +D ++ +A + + R+N +LS
Sbjct: 181 LVLGCTHYPIVIDYIEEALIGENVRIVDPAERLAYDVKEYITRVNMINPNGSGQVQFYLS 240
Query: 254 GKPDIAMRRLMQGF 267
+
Sbjct: 241 KMTQSFIEIAKILL 254
>gi|219871943|ref|YP_002476318.1| glutamate racemase [Haemophilus parasuis SH0165]
gi|254766116|sp|B8F7R8|MURI_HAEPS RecName: Full=Glutamate racemase
gi|219692147|gb|ACL33370.1| glutamate racemase [Haemophilus parasuis SH0165]
Length = 267
Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats.
Identities = 78/261 (29%), Positives = 131/261 (50%), Gaps = 6/261 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +IL++DSG+GGL + +R +P+ H++Y D+ FPY + L + + + I
Sbjct: 1 MKPTILLYDSGMGGLTIYDAIRENLPDAHYLYCFDNAYFPYSEKSEAVLIELAVGIVQKI 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ Y + V+ACNTA T++ LR F +M +G VPAIK AA +Q+ I +L+T T
Sbjct: 61 AENYPLDMVVVACNTASTVVLPALRERF-AMPIVGTVPAIKPAAQISQTKTIGLLATKGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R Y LI Y C + + S L VEE + ++K +E
Sbjct: 120 VTRPYVDELIERYAKDCVVERIGSTDLVEIVEEKQQTGSVDMRRLQKVVEEWQSH---PT 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTH+PL+ +QL P ++D + IA R LL + + ++ F
Sbjct: 177 LDTVILGCTHFPLVKEELQQLLPRVSFFVDPGNGIANRVVSLLQDVKRNVNNENKENQAF 236
Query: 252 LSGKPDIAMRR--LMQGFGLK 270
+ + ++R +MQ +G K
Sbjct: 237 CTQNSENFLKREKVMQNWGFK 257
>gi|172061157|ref|YP_001808809.1| glutamate racemase [Burkholderia ambifaria MC40-6]
gi|171993674|gb|ACB64593.1| glutamate racemase [Burkholderia ambifaria MC40-6]
Length = 287
Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats.
Identities = 69/275 (25%), Positives = 111/275 (40%), Gaps = 10/275 (3%)
Query: 1 MKIDNYPCEKKLQN--SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58
M + + P ++ + IFDSG+GGL VL+ +R +P F+YVAD PYG ++
Sbjct: 1 MTMTHQPAASGVRPAAPVGIFDSGLGGLSVLRAVRAHLPGESFVYVADSQHAPYGPRDEA 60
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ +R + + + L + VIACNTA +R S+ +G P IK AAA +
Sbjct: 61 FITERTLAI-GEWLAREGAKALVIACNTATARAIAAIRERL-SIPLVGVEPGIKPAAALS 118
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
+G+ +L+T +TL L+ Y + L +E ++
Sbjct: 119 TTGVAGVLATQSTLNSPRFQALLDRYGAGRRFICQPGHGLVEAIERGDTN----SPALRT 174
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+E D +VL CTHYP R + + +D SD+IAR+ +L
Sbjct: 175 LLERYLQPMLDDGADTLVLGCTHYPFFTETIRDIVGDRLTIVDTSDAIARQLARVLDERG 234
Query: 239 THQTRV--FDDHALFLSGKPDIAMRRLMQGFGLKS 271
+G GL +
Sbjct: 235 LRAPAGTRAAPPRFCSTGDGRQLHALASTLLGLDA 269
>gi|164687228|ref|ZP_02211256.1| hypothetical protein CLOBAR_00869 [Clostridium bartlettii DSM
16795]
gi|164603652|gb|EDQ97117.1| hypothetical protein CLOBAR_00869 [Clostridium bartlettii DSM
16795]
Length = 258
Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats.
Identities = 58/258 (22%), Positives = 106/258 (41%), Gaps = 5/258 (1%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ +I +FDSG+GG+ VL+ ++ LMP FIY D PYG + KR + +
Sbjct: 3 NSKKAIGVFDSGLGGISVLRDLKKLMPNEDFIYFGDSAYAPYGIKTKDEITKRCVEIIDF 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++K VIACNTA + + LR + + +G PA+K A ++ I +++TP
Sbjct: 63 FIEK-GVKAVVIACNTATSASANYLRKKYKDLPIIGMEPALKVATQGVKNNNIVVMATPL 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TL+ L+H + + + L VE E + +++ +
Sbjct: 122 TLKEKKFETLMHKFRGNNKVVKMPCPKLVEIVENDLLD---DETTVVNQLKDYYKNVNVD 178
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHA 249
D +VL CTH+ + P +D + + + +L + +
Sbjct: 179 NLDSVVLGCTHFIFYKDYLNEFLPETAHLVDGNMGTCKHVKEILEQKHELNEENHVGKIE 238
Query: 250 LFLSGKPDIAMRRLMQGF 267
++ S + M +
Sbjct: 239 IYNSSEDQKYMTLSNKLL 256
>gi|237703008|ref|ZP_04533489.1| glutamate racemase MurI [Escherichia sp. 3_2_53FAA]
gi|115515364|gb|ABJ03439.1| glutamate racemase MurI [Escherichia coli APEC O1]
gi|226902945|gb|EEH89204.1| glutamate racemase MurI [Escherichia sp. 3_2_53FAA]
gi|323954254|gb|EGB50039.1| glutamate racemase [Escherichia coli H263]
Length = 289
Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats.
Identities = 82/260 (31%), Positives = 142/260 (54%), Gaps = 4/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + +
Sbjct: 25 RPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFIVERVVEIVTAVQ 84
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T+
Sbjct: 85 ERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTV 143
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R+YT LI + ++C I ++ S + E G + D +K+ + KE
Sbjct: 144 KRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP-- 201
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PL+ Q+ P +D+ +IARR LL + A +
Sbjct: 202 DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCM 261
Query: 253 SGKPD-IAMRRLMQGFGLKS 271
+ P+ + ++Q +G ++
Sbjct: 262 AMTPEAEQLLPVLQRYGFET 281
>gi|148256679|ref|YP_001241264.1| glutamate racemase [Bradyrhizobium sp. BTAi1]
gi|146408852|gb|ABQ37358.1| glutamate racemase [Bradyrhizobium sp. BTAi1]
Length = 265
Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats.
Identities = 103/262 (39%), Positives = 146/262 (55%), Gaps = 5/262 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ +IL+FDSG+GGL VL+++ P+ H++YVADD FPYG+ AL R++ L
Sbjct: 1 MTNRPTILVFDSGLGGLSVLREVVRARPDAHYVYVADDAFFPYGHHSQEALIARVVPLMG 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+++ ++P L VIACNTA LR+ + + F+G VPAIK A A +++ +S+L T
Sbjct: 61 ELIAGHRPDLIVIACNTASVQTLAPLRAAYAT-PFVGTVPAIKPACAQSRTKRVSVLGTK 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF---IE 186
AT++R YT LI + C + LV S LAS E G + + I EI CF
Sbjct: 120 ATVQREYTHALIRDFAQGCAVTLVGSPELASLAEAALSGTSVSDAAIAAEIAPCFVGDAT 179
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
RTD +VLACTHYPL++ +L+PWPV W+D + +IARR LL T
Sbjct: 180 DPAGRTDTVVLACTHYPLLLDRLERLAPWPVAWIDPAPAIARRVVDLLGPA-TASAGDCG 238
Query: 247 DHALFLSGKPDIAMRRLMQGFG 268
+F S KP + L FG
Sbjct: 239 ATMIFTSQKPHQLSQALTSYFG 260
>gi|110345903|gb|ABG72140.1| glutamate racemase [Escherichia coli 536]
Length = 289
Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats.
Identities = 82/260 (31%), Positives = 142/260 (54%), Gaps = 4/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + +
Sbjct: 25 RPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFIVERVVEIVTAVQ 84
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T+
Sbjct: 85 ERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTV 143
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R+YT LI + ++C I ++ S + E G + D +K+ + KE
Sbjct: 144 KRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP-- 201
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PL+ Q+ P +D+ +IARR LL + A +
Sbjct: 202 DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCM 261
Query: 253 SGKPD-IAMRRLMQGFGLKS 271
+ P+ + ++Q +G ++
Sbjct: 262 AMTPEAEQLLPVLQRYGFET 281
>gi|320451387|ref|YP_004203483.1| glutamate racemase [Thermus scotoductus SA-01]
gi|320151556|gb|ADW22934.1| glutamate racemase [Thermus scotoductus SA-01]
Length = 257
Score = 219 bits (557), Expect = 4e-55, Method: Composition-based stats.
Identities = 54/262 (20%), Positives = 99/262 (37%), Gaps = 17/262 (6%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K + I +FDSG+GGL VL +R +P+ F+Y D PYG+ +++ +
Sbjct: 1 MKDPRRPIGVFDSGVGGLTVLSALRRALPQEDFLYFGDTARVPYGSKPLSMVRRFAWEIA 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
L + V+ACNTA + +L F P K A Y + + ++ T
Sbjct: 61 G-FLLRQGVKAIVVACNTASSAALPDLAEDLSVPVFGVLEPVAKAARGYGK---VGLIGT 116
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ + + + VEE + + +E
Sbjct: 117 QATVESRAYERYVGVS------WARACPLFVPLVEEGLWDDPVALLVARHYLEDA----- 165
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
+ + ++L CTHYP + ++ P V +D++++ A L
Sbjct: 166 PQDLEALILGCTHYPFLKGTLAKVLP-GVRLIDSAEATAEAVAKALKEEGLLNPEGQGRV 224
Query: 249 ALFLSGKPDIAMRRLMQGFGLK 270
F++G P+ + G++
Sbjct: 225 VHFVTGDPESYQNLAER-LGVR 245
>gi|304385230|ref|ZP_07367575.1| glutamate racemase [Pediococcus acidilactici DSM 20284]
gi|304328437|gb|EFL95658.1| glutamate racemase [Pediococcus acidilactici DSM 20284]
Length = 265
Score = 219 bits (557), Expect = 4e-55, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 98/256 (38%), Gaps = 6/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++ + LMP +++ D+ PYG + K +D L
Sbjct: 3 NRPIGFMDSGVGGLTVVKAAKELMPNEAVVFIGDEARVPYGPRPTAEVIKFS-QQMADFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K VIACNTA L +T P P + A A T++ I +++T T+
Sbjct: 62 VKKDVKALVIACNTATNAAFQILSTTLPIPVIGVIQPGAQAAVATTRNNRIGVIATEGTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ S + + Q + V+ E ++ E + I+ + + +
Sbjct: 122 KSQAYSTALAALAPQTEVFPVACQSFVELAEHN----QLTTPEALQVIDQQLVGLKNQGI 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALF 251
D +VL CTH+PL+ + V +D + ++ + +L R + D F
Sbjct: 178 DTLVLGCTHFPLLAKGIQTAVGDQVKLVDPGVAAVQQLKDVLERQGLLREATSTPDEQYF 237
Query: 252 LSGKPDIAMRRLMQGF 267
+
Sbjct: 238 ATANIASFRTIAQSFL 253
>gi|83312678|ref|YP_422942.1| glutamate racemase [Magnetospirillum magneticum AMB-1]
gi|82947519|dbj|BAE52383.1| Glutamate racemase [Magnetospirillum magneticum AMB-1]
Length = 273
Score = 219 bits (557), Expect = 4e-55, Method: Composition-based stats.
Identities = 61/253 (24%), Positives = 103/253 (40%), Gaps = 4/253 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL VL+ +R +P IY+ D PYG + + + L
Sbjct: 8 PIGIFDSGVGGLTVLKAVRERLPGESLIYLGDTARLPYGTKSAQTVAAYALE-ATRRLVS 66
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLR 133
Y ++A NT+ + LR+ FP + +G V P AAA + G I++++T + ++
Sbjct: 67 YGIKALLVADNTSSAHALEGLRAAFPGLPVIGVVEPGATAAAAASARGRIAVIATESAVQ 126
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I + + + S VEE I E + ++ F + D
Sbjct: 127 AGTYPRAILHSRPNAQVTQLPCPLFVSMVEEGLVDGPIAEQIARHYLDPLFSGPDAA--D 184
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++L CTH+P + +FR+L V +D++ + A LL +
Sbjct: 185 CLLLGCTHFPALAPLFRRLLGRDVAVVDSASTTAMVLEDLLSLRGLRAPGGTARVRYLAT 244
Query: 254 GKPDIAMRRLMQG 266
P+ R
Sbjct: 245 DAPERFARVSRVF 257
>gi|91213519|ref|YP_543505.1| glutamate racemase [Escherichia coli UTI89]
gi|162317562|ref|YP_859563.2| glutamate racemase [Escherichia coli APEC O1]
gi|218561042|ref|YP_002393955.1| glutamate racemase [Escherichia coli S88]
gi|122421619|sp|Q1R3U0|MURI_ECOUT RecName: Full=Glutamate racemase
gi|226722983|sp|B7MIA7|MURI_ECO45 RecName: Full=Glutamate racemase
gi|91075093|gb|ABE09974.1| glutamate racemase [Escherichia coli UTI89]
gi|218367811|emb|CAR05605.1| glutamate racemase [Escherichia coli S88]
gi|294491460|gb|ADE90216.1| glutamate racemase [Escherichia coli IHE3034]
gi|307629048|gb|ADN73352.1| glutamate racemase [Escherichia coli UM146]
gi|323949465|gb|EGB45354.1| glutamate racemase [Escherichia coli H252]
Length = 285
Score = 219 bits (557), Expect = 4e-55, Method: Composition-based stats.
Identities = 82/260 (31%), Positives = 142/260 (54%), Gaps = 4/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + +
Sbjct: 21 RPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFIVERVVEIVTAVQ 80
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T+
Sbjct: 81 ERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTV 139
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R+YT LI + ++C I ++ S + E G + D +K+ + KE
Sbjct: 140 KRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP-- 197
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PL+ Q+ P +D+ +IARR LL + A +
Sbjct: 198 DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCM 257
Query: 253 SGKPD-IAMRRLMQGFGLKS 271
+ P+ + ++Q +G ++
Sbjct: 258 AMTPEAEQLLPVLQRYGFET 277
>gi|332669874|ref|YP_004452882.1| glutamate racemase [Cellulomonas fimi ATCC 484]
gi|332338912|gb|AEE45495.1| glutamate racemase [Cellulomonas fimi ATCC 484]
Length = 271
Score = 219 bits (557), Expect = 4e-55, Method: Composition-based stats.
Identities = 60/263 (22%), Positives = 96/263 (36%), Gaps = 12/263 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I IFDSG+GGL V + + +P +Y+ D + PYG A++ + + D
Sbjct: 2 NDAPIGIFDSGVGGLTVARSVLDQLPHESTLYIGDTLNTPYGPKPLAAVRAHALEVMDD- 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV----PAIKQAAAYTQSGLISILS 127
L L VIACNTA + + R + + V PA ++A A T++G I ++
Sbjct: 61 LVDAGVKLLVIACNTASAAVLRDARERYTLRRGIPVVEVILPAARRAVAATRTGRIGVIG 120
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT+ + + + VE E+
Sbjct: 121 TRATVDSRAYDDAFAV-APGVTLTSQACPRFVELVEAGVTSG----PEVLAVAHEYLDPV 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-- 245
D +VL CTHYPL+ V + V + +S+ A+ L +
Sbjct: 176 RDAGVDTLVLGCTHYPLLTGVISYVMGDDVTLVSSSEETAKDVYRTLVGHGIERDPAADL 235
Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268
H +G P + G
Sbjct: 236 PTHRFLATGDPVAFQTLARRFLG 258
>gi|115523653|ref|YP_780564.1| glutamate racemase [Rhodopseudomonas palustris BisA53]
gi|115517600|gb|ABJ05584.1| glutamate racemase [Rhodopseudomonas palustris BisA53]
Length = 278
Score = 219 bits (557), Expect = 4e-55, Method: Composition-based stats.
Identities = 107/261 (40%), Positives = 155/261 (59%), Gaps = 4/261 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ +IL+FDSG+GGL VL+++ L P+ H++YVADD FPYG + A+ R++ L
Sbjct: 1 MPIVPTILVFDSGLGGLTVLREITKLRPDAHYVYVADDAFFPYGQHGEEAIIARVVPLIG 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+++ + P L VIACNTA TL+ LR+ + + F+G VPAIK A A +QS +S+L T
Sbjct: 61 EMIAAHAPDLVVIACNTASTLVLSHLRAAY-GVPFVGTVPAIKPACAGSQSKRVSVLGTR 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI--EK 187
T++R YT LI + C + LV S LA+ E G ++ + EI EI CF+
Sbjct: 120 GTVQREYTKALIRDFAQNCAVTLVGSAHLAALAEAALGGAEVTDAEILAEIAPCFVAEPD 179
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
G RTD +VLACTHYPL++ +L+PWPV+W+D + +IARR LL + H R
Sbjct: 180 HGPRTDTVVLACTHYPLLLDRLERLAPWPVNWIDPAPAIARRVSTLLAGVQGHADR-AGA 238
Query: 248 HALFLSGKPDIAMRRLMQGFG 268
+ SG+P L+ FG
Sbjct: 239 QMIMTSGRPHPLASVLLPFFG 259
>gi|165977281|ref|YP_001652874.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 3 str.
JL03]
gi|307251416|ref|ZP_07533331.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 4 str.
M62]
gi|307262335|ref|ZP_07543983.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 12 str.
1096]
gi|226707583|sp|B0BT16|MURI_ACTPJ RecName: Full=Glutamate racemase
gi|165877382|gb|ABY70430.1| glutamate racemase [Actinobacillus pleuropneumoniae serovar 3 str.
JL03]
gi|306856584|gb|EFM88725.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 4 str.
M62]
gi|306867998|gb|EFM99826.1| Glutamate racemase [Actinobacillus pleuropneumoniae serovar 12 str.
1096]
Length = 265
Score = 219 bits (557), Expect = 4e-55, Method: Composition-based stats.
Identities = 77/261 (29%), Positives = 133/261 (50%), Gaps = 6/261 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +IL++DSG+GGL + +R +P H++Y D+ FPY ++ L ++ + + I
Sbjct: 1 MKPTILLYDSGMGGLTIYDAIRQTLPNAHYLYCFDNAYFPYSERSENVLIEQAVKIVQKI 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+KY + V+ACNTA T++ LR F + +G VPAIK AAA +Q+ I +L+T T
Sbjct: 61 AEKYPLDMVVVACNTASTVVLPALREKF-AFPIVGTVPAIKPAAAISQTKTIGLLATKGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R Y + LI Y C + + + L VEE ++ ++ + + I
Sbjct: 120 VERPYVAELIEKYAKDCIVEKIGTTTLVELVEEKIRTGQVDQERLIEVIAEWQTH---PT 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTH+PL+ +QL P ++D + IA R LL + ++ F
Sbjct: 177 LDTVILGCTHFPLVKQELQQLLPNVKYFIDPGNGIANRVSALLSESVPEEPEQNKENIAF 236
Query: 252 LSGKPDIAMRR--LMQGFGLK 270
+ + +R +MQ +G K
Sbjct: 237 CTKIDEEFFKREVIMQQWGFK 257
>gi|224367637|ref|YP_002601800.1| MurI [Desulfobacterium autotrophicum HRM2]
gi|223690353|gb|ACN13636.1| MurI [Desulfobacterium autotrophicum HRM2]
Length = 283
Score = 219 bits (557), Expect = 4e-55, Method: Composition-based stats.
Identities = 73/259 (28%), Positives = 125/259 (48%), Gaps = 6/259 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ + +FDSG+GG+ VL+ +R L+P+ IYVAD PYGN ++ R + +
Sbjct: 17 RSNDAPLGVFDSGVGGVSVLKWIRQLLPQEDLIYVADKGYAPYGNKSSDYVRDRAAHI-T 75
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L + + V+ACNTA LRS F + F+G P ++ A T+SG+I +L+T
Sbjct: 76 RFLLEKRVKAVVVACNTATVTAITTLRSMFK-VPFIGIEPGVRPALNATRSGVIGVLATT 134
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
TLR T + LI + + + L +VE + E +K +E +
Sbjct: 135 ETLRSTSFNALIQRFCKDIRVEVQECPGLMEQVE----SMAFTTPETRKLLERYLVPLLE 190
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
K D IVL CTHYP +V + R+++ + ++ ++++R+ +L ++ TR
Sbjct: 191 KGADTIVLGCTHYPFLVPLVREMAGQEIRIIETGEAVSRQVMRILTTMDLLTTRTEPGST 250
Query: 250 LFLSGKPDIAMRRLMQGFG 268
F + + Q +G
Sbjct: 251 SFWTSGDCCIETVISQLWG 269
>gi|331270559|ref|YP_004397051.1| glutamate racemase [Clostridium botulinum BKT015925]
gi|329127109|gb|AEB77054.1| glutamate racemase [Clostridium botulinum BKT015925]
Length = 257
Score = 219 bits (557), Expect = 4e-55, Method: Composition-based stats.
Identities = 65/256 (25%), Positives = 113/256 (44%), Gaps = 6/256 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I FDSG+GGL VL++ ++P FIY D PYG + +KK +L
Sbjct: 7 PIGFFDSGVGGLSVLKEAIKILPNEDFIYFGDSKNAPYGTKKVDEVKKLTFDAV-KMLLD 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
Y V+ACNTA + ++LR+T+ + +G PA+K A +Q G I I++T TL
Sbjct: 66 YNVKAIVVACNTATSAAIEDLRNTYKDIPIIGIEPALKPAVELSQDGKIVIMATNMTLAE 125
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ L+ Y + I + L +E+ ++ E+ + + G + +
Sbjct: 126 KKFNKLMSKYKDEYDIVSLPCPGLVEYIEKGI----VQGKELNEFLSGRLSILDKDKIAS 181
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALFLS 253
+VL CTHYP + + V +D S A + + L + N+ + S
Sbjct: 182 VVLGCTHYPFVKKELSNILGDEVVIIDGSFGTASQLKRKLIKNNSINKDNKKGKITVLNS 241
Query: 254 GKPDIAMRRLMQGFGL 269
+ + ++ + G+
Sbjct: 242 LQDEEIIKISKKLLGI 257
>gi|296132631|ref|YP_003639878.1| glutamate racemase [Thermincola sp. JR]
gi|296031209|gb|ADG81977.1| glutamate racemase [Thermincola potens JR]
Length = 270
Score = 219 bits (557), Expect = 4e-55, Method: Composition-based stats.
Identities = 68/255 (26%), Positives = 111/255 (43%), Gaps = 17/255 (6%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GG+ VL+ M L+P FIY AD + PYG ++ + RL + L
Sbjct: 7 DRPIGIFDSGVGGISVLKDMVQLLPNEKFIYYADSLNAPYGTKDNETI-ARLSRNVARFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
V+ACNTA + ++LR+ + +G PA+K A + G + +++TP TL
Sbjct: 66 VDKGIKTLVVACNTATAVAINQLRAEL-DIPVIGMEPAVKPAVELGKEGKVLVMATPVTL 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
++ + L+H Y + + L VE+ K EIK+ + + +
Sbjct: 125 KQEKFNKLLHRYDEHSRVIPLPCPGLVELVEKGITQGK----EIKEYLSKLLANIQRDQI 180
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD----- 247
V+VL CTHY + +Q P + +D + A+R +L +
Sbjct: 181 AVVVLGCTHYVFVRDTIKQFFPSQIPVIDGNCGTAKRLLKVLEDAGLRAPEKKGEKEIGM 240
Query: 248 ------HALFLSGKP 256
+ SG P
Sbjct: 241 QVRKMAVKFYTSGDP 255
>gi|162138273|ref|YP_672041.2| glutamate racemase [Escherichia coli 536]
gi|306813762|ref|ZP_07447938.1| glutamate racemase [Escherichia coli NC101]
gi|331649824|ref|ZP_08350904.1| glutamate racemase [Escherichia coli M605]
gi|281181040|dbj|BAI57370.1| glutamate racemase [Escherichia coli SE15]
gi|305852760|gb|EFM53207.1| glutamate racemase [Escherichia coli NC101]
gi|331041457|gb|EGI13607.1| glutamate racemase [Escherichia coli M605]
Length = 285
Score = 219 bits (557), Expect = 4e-55, Method: Composition-based stats.
Identities = 82/260 (31%), Positives = 142/260 (54%), Gaps = 4/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + +
Sbjct: 21 RPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFIVERVVEIVTAVQ 80
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T+
Sbjct: 81 ERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTV 139
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R+YT LI + ++C I ++ S + E G + D +K+ + KE
Sbjct: 140 KRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP-- 197
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PL+ Q+ P +D+ +IARR LL + A +
Sbjct: 198 DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCM 257
Query: 253 SGKPD-IAMRRLMQGFGLKS 271
+ P+ + ++Q +G ++
Sbjct: 258 AMTPEAEQLLPVLQRYGFET 277
>gi|296448272|ref|ZP_06890166.1| glutamate racemase [Methylosinus trichosporium OB3b]
gi|296254224|gb|EFH01357.1| glutamate racemase [Methylosinus trichosporium OB3b]
Length = 280
Score = 219 bits (557), Expect = 5e-55, Method: Composition-based stats.
Identities = 111/262 (42%), Positives = 157/262 (59%), Gaps = 4/262 (1%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
IL+FDSG+GGL V ++ L P +Y ADD GFPYG + AL R+M + ++
Sbjct: 11 PKILVFDSGLGGLTVFVEVAKLRPHATLLYCADDAGFPYGPLSEEALVARVMLVMESLVA 70
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ P L VIACNTA T + LR+ +P++ F+G VPA+K AA ++S LIS+L+TP T+
Sbjct: 71 AHAPDLVVIACNTASTRVLPHLRARWPNLPFVGTVPAVKPAAERSRSRLISVLATPGTVT 130
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE-KEGKRT 192
R YT LI S+ C LV S LA E++ G + E EI EI CF++ +G RT
Sbjct: 131 RDYTRALIASFAEGCEATLVGSSRLAPIAEDFLRGAAVSEAEIAAEIAPCFVQRPDGART 190
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC-LLPRINTHQTR-VFDDHAL 250
DV+VLACTHYPL++ FR+L+PWPV+W+D + +IAR+A LL R + A+
Sbjct: 191 DVVVLACTHYPLLLDFFRRLAPWPVEWIDPAPAIARQADRLLLQRFGADRIGFREPPRAI 250
Query: 251 FLSG-KPDIAMRRLMQGFGLKS 271
F SG +P + + G +
Sbjct: 251 FTSGARPVPPLAAALSRLGFAA 272
>gi|315079376|gb|EFT51374.1| glutamate racemase [Propionibacterium acnes HL053PA2]
Length = 284
Score = 219 bits (557), Expect = 5e-55, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 103/260 (39%), Gaps = 8/260 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + I IFDSG GGL V + + LMP +Y+ D PYG +++ +
Sbjct: 9 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRQYALQCLDR- 67
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + +IACNTA + + + R + +PA ++A+A T++G I ++ T AT
Sbjct: 68 LVAHGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVICTEAT 127
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
R + + + + + VE+ E++ +
Sbjct: 128 ARSLSYEDALAAV-PGITLTTQACPKFVPFVEDGITSG----PELETIAREYLAPIQEAG 182
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ + + V + +S AR + L+ D F
Sbjct: 183 CDTLILGCTHYPLLAGLISYVLGDGVTLISSSQQCARASYSLMAESGLLHPHPRDSSRYF 242
Query: 252 -LSGKPDIAMRRLMQGF-GL 269
+G + + + G
Sbjct: 243 LTTGNAERFEKLGRRLMEGF 262
>gi|291523945|emb|CBK89532.1| glutamate racemase [Eubacterium rectale DSM 17629]
Length = 258
Score = 219 bits (557), Expect = 5e-55, Method: Composition-based stats.
Identities = 57/233 (24%), Positives = 99/233 (42%), Gaps = 4/233 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ VL+ + +MP FIY D PYG ++ +++
Sbjct: 3 IAVFDSGVGGISVLKSLVEVMPNEDFIYYGDSANAPYGTKTLEQVRALTCEHAKELILNQ 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA + LR +P + +G PA+K A + ++ + +++TP T+R
Sbjct: 63 HAKGLVVACNTATSAAVRILREQYPDVPIVGIEPAVKPAMLFMENPRVLVMATPMTIREE 122
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L+ Y I + L + VE + D++++ +E D +
Sbjct: 123 KLKKLMDRYRHLGEIIPLPCPGLMNFVER----GDLYGDDVRQYLEELLYSYSHGEIDAV 178
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
VL CTHYP + + +++ V D + AR + L
Sbjct: 179 VLGCTHYPFVRKMIQEVLGDRVRVFDGGNGTAREMKRRLAEKGLLTDSTAAGI 231
>gi|270290961|ref|ZP_06197184.1| glutamate racemase [Pediococcus acidilactici 7_4]
gi|270280357|gb|EFA26192.1| glutamate racemase [Pediococcus acidilactici 7_4]
Length = 265
Score = 219 bits (557), Expect = 5e-55, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 98/256 (38%), Gaps = 6/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++ + LMP +++ D+ PYG + K +D L
Sbjct: 3 NRPIGFMDSGVGGLTVVKAAKELMPNEAVVFIGDEARVPYGPRPTAEVIKFS-QQMADFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K VIACNTA L +T P P + A A T++ I +++T T+
Sbjct: 62 VKKDVKALVIACNTATNAAFQILSTTLPIPVIGVIQPGAQAAVATTRNNRIGVIATEGTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ S + + Q + V+ E ++ E + I+ + + +
Sbjct: 122 KSQAYSTALAALAPQTEVFPVACQSFVELAEHN----QLTTPEALQVIDQQLVGLKNQGI 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALF 251
D +VL CTH+PL+ + V +D + ++ + +L R + D F
Sbjct: 178 DTLVLGCTHFPLLAKGIQTAVGDRVKLVDPGVAAVQQLKDVLERQGLLREATSTPDEQYF 237
Query: 252 LSGKPDIAMRRLMQGF 267
+
Sbjct: 238 ATANIASFRTIAQSFL 253
>gi|241895985|ref|ZP_04783281.1| glutamate racemase [Weissella paramesenteroides ATCC 33313]
gi|241870716|gb|EER74467.1| glutamate racemase [Weissella paramesenteroides ATCC 33313]
Length = 277
Score = 219 bits (557), Expect = 5e-55, Method: Composition-based stats.
Identities = 56/263 (21%), Positives = 96/263 (36%), Gaps = 9/263 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+I DSGIGGL V+++ +P+ Y+ D PYG +KK L L
Sbjct: 3 NRAIGYLDSGIGGLSVVKQALKQLPDEQVYYIGDTARMPYGPRTSDEVKKFTWQLVD-FL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L V+ACNTA D+L P P + A+ T+S I I++T T+
Sbjct: 62 MEKDIKLLVVACNTATAATLDDLIKYLPIPVVGVIQPGVDAASQVTESNNIGIIATQGTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + H+ +++ L E+ E + + + + +
Sbjct: 122 NSMAYYDGLKKINADFHVLQLATPTLVKIAEQPEKN----ELTVNQVVTKVLLPIKASGI 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA--- 249
D +VL CTH+PL+ ++ V +D S +L
Sbjct: 178 DTLVLGCTHFPLLAKFIQESVGEQVKLVDPGTSTIAAVAQILDDFKIRHESTNGQKRNLD 237
Query: 250 -LFLSGKPDIAMRRLMQGFGLKS 271
F +G I + +
Sbjct: 238 KYFTTGDQKIFDLLAENWLQISN 260
>gi|119356253|ref|YP_910897.1| glutamate racemase [Chlorobium phaeobacteroides DSM 266]
gi|166231032|sp|A1BDJ6|MURI_CHLPD RecName: Full=Glutamate racemase
gi|119353602|gb|ABL64473.1| glutamate racemase [Chlorobium phaeobacteroides DSM 266]
Length = 272
Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats.
Identities = 61/257 (23%), Positives = 105/257 (40%), Gaps = 7/257 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ I IFDSG+GGL V++ ++ MP IY D PYG ++K + IL
Sbjct: 9 ESPIGIFDSGVGGLTVVRAIQAEMPAERIIYFGDTARVPYGTKSPATIRKYAHEDTA-IL 67
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ P + ++ACNT L D + T S+ +G + A A T++ + ++ T AT
Sbjct: 68 MSHLPKIIIVACNTVSALALDVVEKTAGSIPVIGVLKAGADLAVQVTRNKHVGVIGTQAT 127
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ ++ I + + + + EE + +G
Sbjct: 128 VSSNAYADAITLLDANIEVVSKACPLFVPLAEEGFTEH----AATRLIASDYLAAFDGHD 183
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHAL 250
D +VL CTHYP++ HV + + +D+++++A R R LL T L
Sbjct: 184 IDTLVLGCTHYPILRHVITETLHRDIRIIDSAEAVAGRTRKLLADAKLLSTEKHAPPPHL 243
Query: 251 FLSGKPDIAMRRLMQGF 267
+S P
Sbjct: 244 LVSDLPQKFSMLYKLFM 260
>gi|291562561|emb|CBL41377.1| glutamate racemase [butyrate-producing bacterium SS3/4]
Length = 275
Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats.
Identities = 64/260 (24%), Positives = 112/260 (43%), Gaps = 9/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I + DSG+GG+ VL+++ LMP F+Y D PYG + +L
Sbjct: 22 NRPIGVLDSGLGGISVLRELVKLMPGEAFLYYGDSANAPYGTRTPEEVIDLTKKDVDFLL 81
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ V+ACNTA ++ ELR + + +G PA+K A + + +++TP
Sbjct: 82 ER-GAKAIVVACNTATSVAIRELREEYEKKDIPVIGIEPALKPAVLAKEHSKVVVMATPM 140
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TL +T ++++H Y + +I + L +E G ++ + + +E F E
Sbjct: 141 TLSQTKFNSMLHVYEDEANIIKMPCPGLVEYIE----GGMLEGPVLDEYLEKQFEPYEKS 196
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-HA 249
D +VL CTHYPL+ ++ P V D A++ R L +
Sbjct: 197 EIDAVVLGCTHYPLVKDEIQKHLP-GVAIYDGGFGTAKQTRKRLTECGLLSGKESGGEVK 255
Query: 250 LFLSGKPDIAMRRLMQGFGL 269
+F S + + + L
Sbjct: 256 IFNSKNTEDVLELSRRLLNL 275
>gi|313828237|gb|EFS65951.1| glutamate racemase [Propionibacterium acnes HL063PA2]
gi|315110459|gb|EFT82435.1| glutamate racemase [Propionibacterium acnes HL030PA2]
Length = 284
Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 104/260 (40%), Gaps = 8/260 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + I IFDSG GGL V + + LMP +Y+ D PYG +++ +
Sbjct: 9 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRRYALQCLDR- 67
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + +IACNTA + + + R + +PA ++A+A T++G I ++ T AT
Sbjct: 68 LVAHGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVICTEAT 127
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
R + + + + + VEE E++ +
Sbjct: 128 ARSLSYEDALAAV-PGITLTTQACPKFVPFVEEGITSG----PELEAIAREYLAPIQEAG 182
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ + + V + +S AR + L+ + + F
Sbjct: 183 CDTLILGCTHYPLLAGLISYVLGDDVTLISSSHQCARASYSLMVESGLLHSHPRESSRYF 242
Query: 252 -LSGKPDIAMRRLMQGF-GL 269
+G + + + G
Sbjct: 243 LTTGNAERFEKLGRRLMEGF 262
>gi|186476698|ref|YP_001858168.1| glutamate racemase [Burkholderia phymatum STM815]
gi|184193157|gb|ACC71122.1| glutamate racemase [Burkholderia phymatum STM815]
Length = 303
Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats.
Identities = 65/261 (24%), Positives = 107/261 (40%), Gaps = 8/261 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ + IFDSG+GGL VL+ +R +P +YVAD + PYG +D + R + + + L
Sbjct: 29 RAPVGIFDSGLGGLSVLRAVRSQLPSEAIVYVADSLYAPYGERDDDFIADRTLAI-GEWL 87
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
V+ACNTA +R P + +G P +K AA ++S + +L+T TL
Sbjct: 88 IAQGAKALVVACNTATAQSIALVREKLP-IQLIGVEPGVKPAAQQSKSRVAGVLATRVTL 146
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R L+ Y S C L VE I+ E++ +
Sbjct: 147 RSARFQGLLERYASDCRFLCQPGHGLVEAVERC----DIESAELRALLVSYVQPMLDAGA 202
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFDDHAL 250
D +VL CTHYP + R ++ + +D S +IAR+ +L +
Sbjct: 203 DTLVLGCTHYPFLDAAIRDIAGDRLTLIDTSVAIARQLERVLDQQGLRSPERDTVPPPRF 262
Query: 251 FLSGKPDIAMRRLMQGFGLKS 271
+ + + +
Sbjct: 263 CSTSDGAHLKQLAKTLLNIDA 283
>gi|54298200|ref|YP_124569.1| hypothetical protein lpp2258 [Legionella pneumophila str. Paris]
gi|53751985|emb|CAH13411.1| hypothetical protein lpp2258 [Legionella pneumophila str. Paris]
gi|307611149|emb|CBX00793.1| hypothetical protein LPW_24971 [Legionella pneumophila 130b]
Length = 279
Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats.
Identities = 63/271 (23%), Positives = 111/271 (40%), Gaps = 10/271 (3%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M + +I +FDSG+GGL VL+ +R +P F+Y+ D PYG +
Sbjct: 1 MTRRSNQLNSNKDLAIGVFDSGMGGLTVLRALRDKLPHESFVYLGDTARLPYGTKSPDTV 60
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF-LGAVPAIKQAAAYTQ 119
K+ M + IL + + VIACNTA T L+S + P A + T+
Sbjct: 61 KQYAMQ-MAKILVERRIKALVIACNTATTAALPHLQSMLTDIPVLGVVAPGAAAAVSATK 119
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+ I++L+T T+ +LI + + + + +L + EE + + +K
Sbjct: 120 NHRIAVLATETTIASRAYHDLIIKNLPEAVVSSRACSVLVALAEEGMVTNAVAREALKHY 179
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
++ D ++L CTH+P+ + L P V +D++ + A LL N
Sbjct: 180 LDDF------SDEDAVLLGCTHFPVFKPLLSSLLPKDVAIVDSAQATAISLYELLQNQNL 233
Query: 240 HQTR--VFDDHALFLSGKPDIAMRRLMQGFG 268
H V ++ + + G
Sbjct: 234 HNDNLEVPPRINYLVTDSINRFQKVGEIFLG 264
>gi|289424939|ref|ZP_06426718.1| glutamate racemase [Propionibacterium acnes SK187]
gi|289154638|gb|EFD03324.1| glutamate racemase [Propionibacterium acnes SK187]
gi|313763385|gb|EFS34749.1| glutamate racemase [Propionibacterium acnes HL013PA1]
gi|313814691|gb|EFS52405.1| glutamate racemase [Propionibacterium acnes HL059PA1]
gi|314914537|gb|EFS78368.1| glutamate racemase [Propionibacterium acnes HL005PA4]
gi|314917605|gb|EFS81436.1| glutamate racemase [Propionibacterium acnes HL050PA1]
gi|314919639|gb|EFS83470.1| glutamate racemase [Propionibacterium acnes HL050PA3]
gi|314924269|gb|EFS88100.1| glutamate racemase [Propionibacterium acnes HL001PA1]
gi|314956853|gb|EFT01007.1| glutamate racemase [Propionibacterium acnes HL027PA1]
gi|314957644|gb|EFT01747.1| glutamate racemase [Propionibacterium acnes HL002PA1]
gi|314967393|gb|EFT11492.1| glutamate racemase [Propionibacterium acnes HL082PA2]
gi|314968973|gb|EFT13071.1| glutamate racemase [Propionibacterium acnes HL037PA1]
gi|315098010|gb|EFT69986.1| glutamate racemase [Propionibacterium acnes HL059PA2]
gi|315102644|gb|EFT74620.1| glutamate racemase [Propionibacterium acnes HL046PA1]
gi|315104465|gb|EFT76441.1| glutamate racemase [Propionibacterium acnes HL050PA2]
gi|315106208|gb|EFT78184.1| glutamate racemase [Propionibacterium acnes HL030PA1]
gi|327325474|gb|EGE67278.1| glutamate racemase [Propionibacterium acnes HL103PA1]
gi|327451223|gb|EGE97877.1| glutamate racemase [Propionibacterium acnes HL087PA3]
gi|327452580|gb|EGE99234.1| glutamate racemase [Propionibacterium acnes HL083PA2]
gi|328751976|gb|EGF65592.1| glutamate racemase [Propionibacterium acnes HL025PA2]
gi|328754780|gb|EGF68396.1| glutamate racemase [Propionibacterium acnes HL087PA1]
Length = 284
Score = 218 bits (556), Expect = 6e-55, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 104/260 (40%), Gaps = 8/260 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + I IFDSG GGL V + + LMP +Y+ D PYG +++ +
Sbjct: 9 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRRYALQCLDR- 67
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + +IACNTA + + + R + +PA ++A+A T++G I ++ T AT
Sbjct: 68 LVAHGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVICTEAT 127
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
R + + + + + VEE E++ +
Sbjct: 128 ARSLSYEDALAAV-PGITLTTQACPKFVPFVEEGITSG----PELEAIAREYLAPIQEAG 182
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ + + V + +S AR + L+ + + F
Sbjct: 183 CDTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMVESGLLHSHPRESSRYF 242
Query: 252 -LSGKPDIAMRRLMQGF-GL 269
+G + + + G
Sbjct: 243 LTTGNAERFEKLGRRLMEGF 262
>gi|258405574|ref|YP_003198316.1| glutamate racemase [Desulfohalobium retbaense DSM 5692]
gi|257797801|gb|ACV68738.1| glutamate racemase [Desulfohalobium retbaense DSM 5692]
Length = 279
Score = 218 bits (556), Expect = 6e-55, Method: Composition-based stats.
Identities = 68/262 (25%), Positives = 111/262 (42%), Gaps = 7/262 (2%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
++ I +FDSG+GGL VL+++ ++P YVAD PYG + +++R + L
Sbjct: 7 ATSPMEGGIGVFDSGVGGLSVLKEIDRVLPHEDLWYVADSAEAPYGEKSEEEIRQRSLEL 66
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
L + VIACNTA +ELR+ P A+K A A + SG I +L+
Sbjct: 67 A-RFLVQRGAKALVIACNTATAAAAEELRAQCPVPVVAVEP-AVKPAVALSCSGCIGVLA 124
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T TL+ L+ Y + + + L RVE + + +
Sbjct: 125 TTGTLQSKRFQALLKRYAGSAEVAVQACPGLVERVEMGDLDGPVT----RVLLGSYVQAL 180
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-D 246
+ D +VL CTHYP + + R + LD ++AR L R+ +
Sbjct: 181 AERGADTLVLGCTHYPFLRPLVRDCIGETMPVLDTGLAVARHLHSELRRLELERPAARQG 240
Query: 247 DHALFLSGKPDIAMRRLMQGFG 268
+ +G+P L + +G
Sbjct: 241 QRRFWTTGEPARCESVLGRLWG 262
>gi|225850547|ref|YP_002730781.1| glutamate racemase [Persephonella marina EX-H1]
gi|254766121|sp|C0QQ35|MURI_PERMH RecName: Full=Glutamate racemase
gi|225646550|gb|ACO04736.1| glutamate racemase [Persephonella marina EX-H1]
Length = 259
Score = 218 bits (556), Expect = 6e-55, Method: Composition-based stats.
Identities = 59/247 (23%), Positives = 107/247 (43%), Gaps = 12/247 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V +++ P Y+ D PYGN + + + ++ L +
Sbjct: 3 IGIFDSGVGGLTVFREIDREFPFADIYYLGDTARVPYGNKSKETIIRYSLE-CANYLYSF 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
++ACNTA + + LR +F P ++ A T++G I ++ T AT++
Sbjct: 62 GIDALIVACNTASSYAIEALRESFDIPVIGVIKPGVELAVKTTKNGRIGVIGTQATIKSG 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
I ++ + VEE KI E +K+ + K D +
Sbjct: 122 SYRTEIEKKG-DFTVYQKPCPLFVPLVEEGLIDHKITELTVKE----YLDDIVSKGIDTL 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYPL+ V +++ P ++ +D+S + A L + N + +F++ +
Sbjct: 177 ILGCTHYPLLKDVIKKIYP-HLNIIDSSKATAL----YLKKKNL-DLNGTGERKIFITDE 230
Query: 256 PDIAMRR 262
+
Sbjct: 231 SPSFEKL 237
>gi|50843138|ref|YP_056365.1| glutamate racemase [Propionibacterium acnes KPA171202]
gi|50840740|gb|AAT83407.1| glutamate racemase [Propionibacterium acnes KPA171202]
Length = 297
Score = 218 bits (556), Expect = 6e-55, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 104/260 (40%), Gaps = 8/260 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + I IFDSG GGL V + + LMP +Y+ D PYG +++ +
Sbjct: 22 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRRYALQCLDR- 80
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + +IACNTA + + + R + +PA ++A+A T++G I ++ T AT
Sbjct: 81 LVAHGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVICTEAT 140
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
R + + + + + VEE E++ +
Sbjct: 141 ARSLSYEDALAAV-PGITLTTQACPKFVPFVEEGITSG----PELEAIAREYLAPIQEAG 195
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ + + V + +S AR + L+ + + F
Sbjct: 196 CDTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMVESGLLHSHPRESSRYF 255
Query: 252 -LSGKPDIAMRRLMQGF-GL 269
+G + + + G
Sbjct: 256 LTTGNAERFEKLGRRLMEGF 275
>gi|254039229|ref|ZP_04873279.1| glutamate synthase [Escherichia sp. 1_1_43]
gi|331644705|ref|ZP_08345824.1| glutamate racemase [Escherichia coli H736]
gi|42876|emb|CAA23637.1| unnamed protein product [Escherichia coli]
gi|42878|emb|CAA23638.1| unnamed protein product [Escherichia coli]
gi|290428|gb|AAA23677.1| glutamate synthase [Escherichia coli]
gi|396314|gb|AAC43073.1| glutamate synthase [Escherichia coli str. K-12 substr. MG1655]
gi|226838665|gb|EEH70694.1| glutamate synthase [Escherichia sp. 1_1_43]
gi|323934456|gb|EGB30869.1| glutamate racemase [Escherichia coli E1520]
gi|323939048|gb|EGB35266.1| glutamate racemase [Escherichia coli E482]
gi|323969719|gb|EGB65003.1| glutamate racemase [Escherichia coli TA007]
gi|331036167|gb|EGI08403.1| glutamate racemase [Escherichia coli H736]
Length = 289
Score = 218 bits (556), Expect = 6e-55, Method: Composition-based stats.
Identities = 82/260 (31%), Positives = 141/260 (54%), Gaps = 4/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + +
Sbjct: 25 RPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQ 84
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T+
Sbjct: 85 ERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTV 143
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R+YT LI + ++C I ++ S + E G + D +K+ + KE
Sbjct: 144 KRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP-- 201
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PL+ Q+ P +D+ +IARR LL + A +
Sbjct: 202 DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCM 261
Query: 253 SGKP-DIAMRRLMQGFGLKS 271
+ P + ++Q +G ++
Sbjct: 262 AMTPGAEQLLPVLQRYGFET 281
>gi|313812338|gb|EFS50052.1| glutamate racemase [Propionibacterium acnes HL025PA1]
Length = 284
Score = 218 bits (556), Expect = 6e-55, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 104/260 (40%), Gaps = 8/260 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + I IFDSG GGL V + + LMP +Y+ D PYG +++ +
Sbjct: 9 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRRYALQCLDR- 67
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + +IACNTA + + + R + +PA ++A+A T++G I ++ T AT
Sbjct: 68 LVAHGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVICTEAT 127
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
R + + + + + VE+ E++ +
Sbjct: 128 ARSLSYEDALAAV-PGITLTTQACPKFVPFVEDGITSG----PELETIAREYLAPIQEAG 182
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ + + V + +S AR + L+ + D F
Sbjct: 183 CDTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMAESGLLHSHPRDSSRYF 242
Query: 252 -LSGKPDIAMRRLMQGF-GL 269
+G + + + G
Sbjct: 243 LTTGNAERFEKLGRRLMEGF 262
>gi|315122618|ref|YP_004063107.1| glutamate racemase [Candidatus Liberibacter solanacearum CLso-ZC1]
gi|313496020|gb|ADR52619.1| glutamate racemase [Candidatus Liberibacter solanacearum CLso-ZC1]
Length = 271
Score = 218 bits (556), Expect = 6e-55, Method: Composition-based stats.
Identities = 192/270 (71%), Positives = 228/270 (84%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
MK +K +N I+IFDSGIGGL VLQK+RFLMPEYHFIYVADD GFPYGNWED+AL
Sbjct: 1 MKNIVIFVKKNPKNCIMIFDSGIGGLSVLQKVRFLMPEYHFIYVADDSGFPYGNWEDNAL 60
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
K+RL+FLF+DIL+KY+PVLS++ACNTAFTL+KDELRSTFPSM FLGAVPAIKQA YT +
Sbjct: 61 KERLLFLFADILEKYKPVLSIVACNTAFTLVKDELRSTFPSMLFLGAVPAIKQATVYTST 120
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
GL+S+LSTPATLRR YT +LI SY S+C I+LVSS LAS E+Y CG +KED I++EI
Sbjct: 121 GLVSVLSTPATLRRAYTDDLIRSYASKCQINLVSSTTLASIAEDYTCGKIVKEDGIQREI 180
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+GCF+EKEG+RTDV+VLACTHYP + H+FR+LSPWPVDWLD S SIARRAR LLP I +
Sbjct: 181 QGCFLEKEGRRTDVVVLACTHYPFMTHIFRRLSPWPVDWLDTSYSIARRARSLLPVIAMN 240
Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQGFGLK 270
+ + DD +F+S KPDIAM+RLMQGFGLK
Sbjct: 241 EVGLSDDQVVFISRKPDIAMQRLMQGFGLK 270
>gi|218692257|ref|YP_002400469.1| glutamate racemase [Escherichia coli ED1a]
gi|29839540|sp|Q8FB89|MURI_ECOL6 RecName: Full=Glutamate racemase
gi|254766115|sp|B7MR95|MURI_ECO81 RecName: Full=Glutamate racemase
gi|218429821|emb|CAR10783.2| glutamate racemase [Escherichia coli ED1a]
Length = 285
Score = 218 bits (556), Expect = 6e-55, Method: Composition-based stats.
Identities = 82/260 (31%), Positives = 142/260 (54%), Gaps = 4/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + +
Sbjct: 21 RPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFIVERVVEIVTAVQ 80
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T+
Sbjct: 81 ERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTV 139
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R+YT LI + ++C I ++ S + E G + D +K+ + KE
Sbjct: 140 KRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP-- 197
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PL+ Q+ P +D+ +IARR LL + A +
Sbjct: 198 DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCM 257
Query: 253 SGKPD-IAMRRLMQGFGLKS 271
+ P+ + ++Q +G ++
Sbjct: 258 AMTPEAEQLLPVLQRYGFET 277
>gi|183602360|ref|ZP_02963726.1| glutamate racemase [Bifidobacterium animalis subsp. lactis HN019]
gi|219683325|ref|YP_002469708.1| glutamate racemase [Bifidobacterium animalis subsp. lactis AD011]
gi|241191286|ref|YP_002968680.1| glutamate racemase [Bifidobacterium animalis subsp. lactis Bl-04]
gi|241196692|ref|YP_002970247.1| glutamate racemase [Bifidobacterium animalis subsp. lactis DSM
10140]
gi|254766107|sp|B8DT03|MURI_BIFA0 RecName: Full=Glutamate racemase
gi|183218279|gb|EDT88924.1| glutamate racemase [Bifidobacterium animalis subsp. lactis HN019]
gi|219620975|gb|ACL29132.1| glutamate racemase [Bifidobacterium animalis subsp. lactis AD011]
gi|240249678|gb|ACS46618.1| glutamate racemase [Bifidobacterium animalis subsp. lactis Bl-04]
gi|240251246|gb|ACS48185.1| glutamate racemase [Bifidobacterium animalis subsp. lactis DSM
10140]
gi|289177402|gb|ADC84648.1| Glutamate racemase [Bifidobacterium animalis subsp. lactis BB-12]
gi|295794279|gb|ADG33814.1| glutamate racemase [Bifidobacterium animalis subsp. lactis V9]
Length = 258
Score = 218 bits (555), Expect = 7e-55, Method: Composition-based stats.
Identities = 65/260 (25%), Positives = 107/260 (41%), Gaps = 7/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ +FDSG+GG+ V++++R +P +Y D PYG ++ +
Sbjct: 1 MTSSAPVGVFDSGLGGISVVRQIRTDLPHERILYFGDSANAPYGTKTPEQVRDLSFRIVE 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--S 127
D + + VIACNTA + ELR + + +G PA+K A S++ +
Sbjct: 61 DFV-EQGAKAVVIACNTATSSAVQELREHY-DIPIIGMEPALKVACDRGHGERQSVIVAA 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TP TLR + L+H + IH L VE D + + + F +
Sbjct: 119 TPLTLRERKFAALMHRFEDAHTIHKQPCPRLVEIVERGELD---DHDLVMRTLHDYFDQY 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+ TD +VL CTH+ FR+L P V +D ++ AR +L + D
Sbjct: 176 DLAHTDSVVLGCTHFVFYRDYFRELLPNNVAIVDGNEGTARHLEVVLESLGKLAPEEQDG 235
Query: 248 HALFLSGKPDIAMRRLMQGF 267
+ + P + L Q
Sbjct: 236 GVILRNSDPGERIAELAQQL 255
>gi|167772360|ref|ZP_02444413.1| hypothetical protein ANACOL_03737 [Anaerotruncus colihominis DSM
17241]
gi|167665463|gb|EDS09593.1| hypothetical protein ANACOL_03737 [Anaerotruncus colihominis DSM
17241]
Length = 269
Score = 218 bits (555), Expect = 7e-55, Method: Composition-based stats.
Identities = 66/256 (25%), Positives = 110/256 (42%), Gaps = 4/256 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q +I +FDSG+GGL ++++R L+PE H IY D PYG+ ++K + L
Sbjct: 3 QRAIGVFDSGLGGLTTVRELRRLLPEEHIIYFGDTGRVPYGSRGREIIRKYAVQDI-RFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + + AC T ++I E+ + +PA + A A + +G I ++ T ATL
Sbjct: 62 RRFDVKIIIAACGTVSSVITPEIVESAGVPFSGVVLPAAQAACAASTNGRIGVIGTAATL 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R I H + + VE I+ + K +
Sbjct: 122 RSGAYGRAIRGIRPDAHTFGNACPLFVPLVENGF--IQPDNEITIKVAQTYLQPMIENEV 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYPLI V +L V +D+ +AR A+ LL R + ++
Sbjct: 180 DTLILGCTHYPLIRPVIDRLLRSRVTLIDSGAQVARWAQTLLTREDML-GAGNGGAEYYV 238
Query: 253 SGKPDIAMRRLMQGFG 268
S P++ + G
Sbjct: 239 SDSPEMFIETAGIFLG 254
>gi|89110063|ref|AP_003843.1| glutamate racemase [Escherichia coli str. K-12 substr. W3110]
gi|90111671|ref|NP_418402.2| glutamate racemase [Escherichia coli str. K-12 substr. MG1655]
gi|170083436|ref|YP_001732756.1| glutamate racemase [Escherichia coli str. K-12 substr. DH10B]
gi|238903032|ref|YP_002928828.1| glutamate racemase [Escherichia coli BW2952]
gi|253775395|ref|YP_003038226.1| glutamate racemase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254163917|ref|YP_003047025.1| glutamate racemase [Escherichia coli B str. REL606]
gi|307140666|ref|ZP_07500022.1| glutamate racemase [Escherichia coli H736]
gi|730081|sp|P22634|MURI_ECOLI RecName: Full=Glutamate racemase
gi|229486276|sp|B1XBX8|MURI_ECODH RecName: Full=Glutamate racemase
gi|259509813|sp|C5A0R6|MURI_ECOBW RecName: Full=Glutamate racemase
gi|85676094|dbj|BAE77344.1| glutamate racemase [Escherichia coli str. K12 substr. W3110]
gi|87082355|gb|AAC76949.2| glutamate racemase [Escherichia coli str. K-12 substr. MG1655]
gi|169891271|gb|ACB04978.1| glutamate racemase [Escherichia coli str. K-12 substr. DH10B]
gi|238861332|gb|ACR63330.1| glutamate racemase [Escherichia coli BW2952]
gi|242379502|emb|CAQ34318.1| glutamate racemase [Escherichia coli BL21(DE3)]
gi|253326439|gb|ACT31041.1| glutamate racemase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253975818|gb|ACT41489.1| glutamate racemase [Escherichia coli B str. REL606]
gi|253979974|gb|ACT45644.1| glutamate racemase [Escherichia coli BL21(DE3)]
gi|260451197|gb|ACX41619.1| glutamate racemase [Escherichia coli DH1]
gi|309704391|emb|CBJ03740.1| glutamate racemase [Escherichia coli ETEC H10407]
gi|315138532|dbj|BAJ45691.1| glutamate synthase [Escherichia coli DH1]
gi|323959264|gb|EGB54925.1| glutamate racemase [Escherichia coli H489]
Length = 285
Score = 218 bits (555), Expect = 7e-55, Method: Composition-based stats.
Identities = 82/260 (31%), Positives = 141/260 (54%), Gaps = 4/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + +
Sbjct: 21 RPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQ 80
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T+
Sbjct: 81 ERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTV 139
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R+YT LI + ++C I ++ S + E G + D +K+ + KE
Sbjct: 140 KRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP-- 197
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PL+ Q+ P +D+ +IARR LL + A +
Sbjct: 198 DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCM 257
Query: 253 SGKP-DIAMRRLMQGFGLKS 271
+ P + ++Q +G ++
Sbjct: 258 AMTPGAEQLLPVLQRYGFET 277
>gi|312143228|ref|YP_003994674.1| glutamate racemase [Halanaerobium sp. 'sapolanicus']
gi|311903879|gb|ADQ14320.1| glutamate racemase [Halanaerobium sp. 'sapolanicus']
Length = 291
Score = 218 bits (555), Expect = 7e-55, Method: Composition-based stats.
Identities = 56/269 (20%), Positives = 108/269 (40%), Gaps = 14/269 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +I + DSG+GGL V +++ L+P IY D + PYG + +++ + + + +
Sbjct: 5 KRAIGLLDSGVGGLTVAREIFKLLPGEDIIYYGDTLHLPYGPKKLSEVREYVENIIAYLK 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNT + D ++ F F A K+A +Q+ I+++ T T+
Sbjct: 65 QEKNVKAVVIACNTGSSAALDYVKQKFEIPIFGMIDSAAKKAVKVSQNNKIAVIGTEGTI 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I ++ I + VE K E++K +
Sbjct: 125 NSQAYQKAIKYESAESEIFAKACPGFVKLVE----AGKFSGPEVEKTAYRYLESIIKAKV 180
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-------TRVF 245
DV++L CTH+P ++ V ++ V ++ + A + R L + N V
Sbjct: 181 DVLILGCTHFPYLMPVLAKVMGKDVMLVNPAQETALKFRKELNKANLLNKDIFLNKDIVE 240
Query: 246 DDHALFLSGK---PDIAMRRLMQGFGLKS 271
+H +S + + + L +
Sbjct: 241 GEHKFIVSDESRISKSFLEHGRRFLKLDN 269
>gi|217975220|ref|YP_002359971.1| glutamate racemase [Shewanella baltica OS223]
gi|254766123|sp|B8EBM4|MURI_SHEB2 RecName: Full=Glutamate racemase
gi|217500355|gb|ACK48548.1| glutamate racemase [Shewanella baltica OS223]
Length = 274
Score = 218 bits (555), Expect = 7e-55, Method: Composition-based stats.
Identities = 78/256 (30%), Positives = 128/256 (50%), Gaps = 11/256 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL ++R +P + Y+ D+ PYG E+ L + L D+
Sbjct: 1 MSRPILVFDSGIGGLSVLAEIRKSLPHSDYCYLFDNARLPYGELEEQVLIAGCVALVCDL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + ++ V+ACNTA T++ LR+ S+ +G VPAIK AA ++S I +L+TP T
Sbjct: 61 VARTNAMIVVVACNTASTVVLPALRANL-SIPVVGVVPAIKPAAQMSKSKRIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT +LI + CH+ L L E+ ++ + +
Sbjct: 120 VKRHYTHSLISQFADDCHVELFGCSELVMMAEQKIATGEMD----MHRLADLLAPVVAAQ 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
DV+VL CTH+P+I +Q+ V +D+ +IA+R LL + N +
Sbjct: 176 LDVLVLGCTHFPMIQAELQQVLGAGVTLMDSGAAIAKRVVTLLTQQNFIVEQRR------ 229
Query: 252 LSGKPDIAMRRLMQGF 267
++ + + MQ F
Sbjct: 230 VTNEREAVGESAMQAF 245
>gi|315093634|gb|EFT65610.1| glutamate racemase [Propionibacterium acnes HL060PA1]
Length = 284
Score = 218 bits (555), Expect = 7e-55, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 104/260 (40%), Gaps = 8/260 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + I IFDSG GGL V + + LMP +Y+ D PYG +++ +
Sbjct: 9 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRRYALQCLDR- 67
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + +IACNTA + + + R + +PA ++A+A T++G I ++ T AT
Sbjct: 68 LVAHGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVICTEAT 127
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
R + + + + + VEE E++ +
Sbjct: 128 ARSLSYEDALAAV-PGITLTTQACPKFVPFVEEGITSG----PELEAIAREYLAPIQEAD 182
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ + + V + +S AR + L+ + + F
Sbjct: 183 CDTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMVESGLLHSHPRESSRYF 242
Query: 252 -LSGKPDIAMRRLMQGF-GL 269
+G + + + G
Sbjct: 243 LTTGNAERFEKLGRRLMEGF 262
>gi|23016272|ref|ZP_00056030.1| COG0796: Glutamate racemase [Magnetospirillum magnetotacticum MS-1]
Length = 273
Score = 218 bits (555), Expect = 8e-55, Method: Composition-based stats.
Identities = 59/255 (23%), Positives = 100/255 (39%), Gaps = 4/255 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL VL+ +R +P+ IY+ D PYG + + + L
Sbjct: 6 NLPIGIFDSGVGGLTVLKAVRERLPDESLIYLGDTARLPYGTKSAQTVAAYALE-ATRAL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPAT 131
Y ++A NT+ + +R+ FP + +G V P AA + G I +++T +
Sbjct: 65 VAYGIKALLVADNTSSAHALEAVRAAFPGLPVIGVVEPGAAAAATASARGRIVVIATESA 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ I + + + VEE I E + + F E
Sbjct: 125 VQAGSYPRAILHSRPNALVTQLPCPLFVPMVEEGLVDGPIAEQIARHYLGPLFTGPEAA- 183
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTH+P + +FR+L V +D++ + A LL
Sbjct: 184 -DCLLLGCTHFPALAPLFRRLLGRDVAVVDSASTTAMVLEDLLSLRRLCNEGGPSRVRYL 242
Query: 252 LSGKPDIAMRRLMQG 266
+ P+ R
Sbjct: 243 ATDAPERFARVSKVF 257
>gi|256025994|ref|ZP_05439859.1| glutamate racemase [Escherichia sp. 4_1_40B]
Length = 285
Score = 218 bits (555), Expect = 8e-55, Method: Composition-based stats.
Identities = 82/260 (31%), Positives = 141/260 (54%), Gaps = 4/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + +
Sbjct: 21 RPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQ 80
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T+
Sbjct: 81 ERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTI 139
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R+YT LI + ++C I ++ S + E G + D +K+ + KE
Sbjct: 140 KRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP-- 197
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PL+ Q+ P +D+ +IARR LL + A +
Sbjct: 198 DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCM 257
Query: 253 SGKP-DIAMRRLMQGFGLKS 271
+ P + ++Q +G ++
Sbjct: 258 AMTPGAEQLLPVLQRYGFET 277
>gi|146313651|ref|YP_001178725.1| glutamate racemase [Enterobacter sp. 638]
gi|145320527|gb|ABP62674.1| glutamate racemase [Enterobacter sp. 638]
Length = 283
Score = 218 bits (555), Expect = 8e-55, Method: Composition-based stats.
Identities = 81/260 (31%), Positives = 141/260 (54%), Gaps = 4/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + +
Sbjct: 21 RPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEDFIVERVVEIVTAVQ 80
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+Y L+VIACNTA T+ LR FP +G VPAIK AA T +G++ +L+T T+
Sbjct: 81 ARYPLALAVIACNTASTVSLPSLREKFP-FPVVGVVPAIKPAARLTANGIVGLLATRGTV 139
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT LI + ++C I ++ S L E G + +E+++ + +
Sbjct: 140 KRPYTRELIDRFANECKIAMLGSAELVEMAEAKLHGEPVSLEELRRILGPWLRM--AEPP 197
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PL+ ++ P +D+ +IARR LL + A +
Sbjct: 198 DTVVLGCTHFPLLQEELLEVLPEGTRLVDSGAAIARRTAWLLEHEAPEAKSSDKNIAFCM 257
Query: 253 SGKPD-IAMRRLMQGFGLKS 271
+ P+ + ++Q +G ++
Sbjct: 258 ALTPETEQLLPVLQRYGFET 277
>gi|331660531|ref|ZP_08361465.1| glutamate racemase [Escherichia coli TA206]
gi|331052480|gb|EGI24517.1| glutamate racemase [Escherichia coli TA206]
Length = 289
Score = 218 bits (555), Expect = 8e-55, Method: Composition-based stats.
Identities = 83/260 (31%), Positives = 143/260 (55%), Gaps = 4/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + +
Sbjct: 25 RPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFIVERVVEIVTAVQ 84
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T+
Sbjct: 85 ERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTV 143
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R+YT LI + ++C I ++ S + E G + D +K+ + KE
Sbjct: 144 KRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP-- 201
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PL+ Q+ P +D+S +IARR LL + A +
Sbjct: 202 DTVVLGCTHFPLLQEELLQVLPEGTRLVDSSAAIARRTAWLLEHEAPDAKSADANIAFCM 261
Query: 253 SGKPD-IAMRRLMQGFGLKS 271
+ P+ + ++Q +G ++
Sbjct: 262 AMTPEAEQLLPVLQRYGFET 281
>gi|269216891|ref|ZP_06160745.1| glutamate racemase [Slackia exigua ATCC 700122]
gi|269129698|gb|EEZ60782.1| glutamate racemase [Slackia exigua ATCC 700122]
Length = 430
Score = 218 bits (555), Expect = 8e-55, Method: Composition-based stats.
Identities = 58/270 (21%), Positives = 101/270 (37%), Gaps = 16/270 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG GGL V +++ LMP +Y D PYG + H + + + + L
Sbjct: 146 NAPIGVFDSGYGGLTVAREIAALMPHESIVYFGDTARCPYGPRDPHEVAEFVQQI-GRWL 204
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA + + TF P + AA T +G + ++ T T+
Sbjct: 205 TARNVKMLVIACNTATAAGLERAQQTFSVPVRGAVEPGARAAARATHNGRVGVIGTKGTI 264
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI-------------KKE 179
I + + + +++ VE K +++ +
Sbjct: 265 ESDCYPRAIRAIDAGLTVFSIATPRFVEIVENGIRLSKGPIEDLTSMASKAYIRPSFQAI 324
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRIN 238
D +VLACTHYPL+ + + V + +S+++A R L R
Sbjct: 325 AREYLEPLRRCHVDALVLACTHYPLLKALIGGVMGHKVLLVSSSEALAHDVRATLTARRQ 384
Query: 239 THQTRVFDDHALFLSGKP-DIAMRRLMQGF 267
T + + + + D + F
Sbjct: 385 TASPDAVPVYEFYTTSEALDDFHDFGSRVF 414
>gi|188532303|ref|YP_001906100.1| glutamate racemase [Erwinia tasmaniensis Et1/99]
gi|229486272|sp|B2VGA6|MURI_ERWT9 RecName: Full=Glutamate racemase
gi|188027345|emb|CAO95190.1| Glutamate racemase [Erwinia tasmaniensis Et1/99]
Length = 283
Score = 218 bits (555), Expect = 8e-55, Method: Composition-based stats.
Identities = 83/262 (31%), Positives = 145/262 (55%), Gaps = 6/262 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L+ ++LIFDSG+GGL V ++R L+P+ H++Y D+V FPYG + + +R++ + + +
Sbjct: 20 LRPTVLIFDSGVGGLSVYNEIRTLLPDLHYLYAFDNVAFPYGEKSEAFIVERVLDIVTAV 79
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
Y L VIACN+A T+ LR+ F + +G VPAIK AA T++G++ +L+T T
Sbjct: 80 TGLYPLALVVIACNSASTVTLPALRARF-AFPVVGVVPAIKPAARLTRNGIVGLLATRGT 138
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT L+ + +C ++ S L E G + +E+++ ++ +
Sbjct: 139 VKRPYTHELVARFAGECKTEMLGSGELVDIAEAKLHGQPVAIEEVRRILQPWLRM--AEP 196
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTH+PLI +Q+ P +D+ +IARR LL + D+ AL
Sbjct: 197 PDTVVLGCTHFPLISEELQQVLPQGTRLIDSGAAIARRTVWLLENESPEVLSADDNMALC 256
Query: 252 L--SGKPDIAMRRLMQGFGLKS 271
L + + + + ++Q +G K+
Sbjct: 257 LEIT-EQTVQLIPVLQRYGFKT 277
>gi|327332416|gb|EGE74152.1| glutamate racemase [Propionibacterium acnes HL097PA1]
Length = 284
Score = 218 bits (555), Expect = 8e-55, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 104/260 (40%), Gaps = 8/260 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + I IFDSG GGL V + + LMP +Y+ D PYG +++ +
Sbjct: 9 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRRYALQCLDR- 67
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + +IACNTA + + + R + +PA ++A+A T++G I ++ T AT
Sbjct: 68 LVAHGVKALLIACNTASSAVLRDARERYDVSVIDVIMPAARRASAATRNGRIGVICTEAT 127
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
R + + + + + VE+ E++ +
Sbjct: 128 ARSLSYEDALAAV-PGITLTTQACPKFVPFVEDGITSG----PELETIAREYLAPIQEAG 182
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ + + V + +S AR + L+ + D F
Sbjct: 183 CDTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMAESGLLHSHPRDSSRYF 242
Query: 252 -LSGKPDIAMRRLMQGF-GL 269
+G + + + G
Sbjct: 243 LTTGNAERFEKLGRRLMEGF 262
>gi|170694655|ref|ZP_02885807.1| glutamate racemase [Burkholderia graminis C4D1M]
gi|170140537|gb|EDT08713.1| glutamate racemase [Burkholderia graminis C4D1M]
Length = 295
Score = 217 bits (554), Expect = 9e-55, Method: Composition-based stats.
Identities = 65/262 (24%), Positives = 112/262 (42%), Gaps = 9/262 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ + IFDSG+GGL VL+ +R +P+ +YVAD + PYG +D + R + + + L
Sbjct: 20 RAPVGIFDSGLGGLSVLRAVRAQLPDEALLYVADSLYAPYGERDDDFIADRTLAI-GEWL 78
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ ++ACNTA +R S+ +G P IK AA +++ + +L+T TL
Sbjct: 79 ARQGAKALIVACNTATAQSIALVREKL-SIPLVGVEPGIKPAALQSKTRVAGVLATQVTL 137
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R L+ Y + C L VE G E++ +
Sbjct: 138 RSARFQALLERYAADCRFICQPGHGLVQAVERCDVG----STELRALLASYLEPMLAAGA 193
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN---THQTRVFDDHA 249
D +VL CTHYP + R + + +D S +IAR+ +L + T +T
Sbjct: 194 DTLVLGCTHYPFLDAAIRDIVGDRMALIDTSVAIARQLERVLEQHGVRATPETAGAPPPR 253
Query: 250 LFLSGKPDIAMRRLMQGFGLKS 271
+ + + + + +
Sbjct: 254 FYSTDNGTHLRQLVATLLNMDA 275
>gi|317050732|ref|YP_004111848.1| glutamate racemase [Desulfurispirillum indicum S5]
gi|316945816|gb|ADU65292.1| glutamate racemase [Desulfurispirillum indicum S5]
Length = 260
Score = 217 bits (554), Expect = 9e-55, Method: Composition-based stats.
Identities = 62/255 (24%), Positives = 108/255 (42%), Gaps = 7/255 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I IFDSG+GG+ VL+ +R +P + +Y+ D PYG + + + D L
Sbjct: 2 KTIGIFDSGVGGITVLKAIRRALPTFDILYLGDTARVPYGTKSRETVLRYSLQ-VGDFLY 60
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L VIACNTA E+R+ + P + A ++SG I+++ T AT++
Sbjct: 61 RKGIDLLVIACNTATAYGLHEIRARYDIPVIGVIEPGAQATVALSRSGRIAVIGTSATVQ 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ I Y+ + ++ +L VEE CG D ++ + G + D
Sbjct: 121 SGQYRSTIQHYLPDADVREIACPMLVPLVEENWCG----TDVAHLILQRYLGQLRG-QVD 175
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTHYP++ ++ P V +D+++ AR L +++
Sbjct: 176 TLVLGCTHYPMLKEDIARVLP-GVTQVDSAEETARTIVGLTGVPAPGTLGTLGTTTYYMT 234
Query: 254 GKPDIAMRRLMQGFG 268
G
Sbjct: 235 DTSQRFAEIASSFLG 249
>gi|29349130|ref|NP_812633.1| glutamate racemase [Bacteroides thetaiotaomicron VPI-5482]
gi|29341037|gb|AAO78827.1| glutamate racemase [Bacteroides thetaiotaomicron VPI-5482]
Length = 280
Score = 217 bits (554), Expect = 9e-55, Method: Composition-based stats.
Identities = 56/261 (21%), Positives = 108/261 (41%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L K+R +PEY ++Y+ D+ PYG + + + + L +
Sbjct: 11 PIGVFDSGYGGLTILNKIREALPEYDYVYLGDNARTPYGTRSFEIVYEFTLQAVNK-LFE 69
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ACNTA + ++L P LG + P ++ TQS I +L+T
Sbjct: 70 MGCHLVILACNTASAKALRSIQMNDLPGIDPERRVLGVIRPTVECIGGITQSRHIGVLAT 129
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ IH + ++ + VE + + I+K I+ +
Sbjct: 130 AGTIKSESYPLEIHKLFPDIQVSGMACPMWVPLVENNESQNEGADYFIRKYIDQLLS--K 187
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFD 246
D ++L CTHYP+++ ++ +P + + + +A + L R +
Sbjct: 188 DPEIDTMILGCTHYPILLPKIQEYTPKHIRIVAQGEYVAESLKDYLSRHPEMNAKCTQNG 247
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ + + +
Sbjct: 248 SCLFYTTEAEEKFVESASSFL 268
>gi|304391421|ref|ZP_07373363.1| glutamate racemase [Ahrensia sp. R2A130]
gi|303295650|gb|EFL90008.1| glutamate racemase [Ahrensia sp. R2A130]
Length = 260
Score = 217 bits (554), Expect = 9e-55, Method: Composition-based stats.
Identities = 120/255 (47%), Positives = 174/255 (68%), Gaps = 2/255 (0%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++L+FDSG+GGL VL++ R LMP + F+YVADD FPYG+WE AL +R+M +F D++ +
Sbjct: 2 TVLVFDSGLGGLSVLREARILMPGHRFVYVADDAAFPYGDWEAEALVERMMEVFEDLVTR 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
++P + ++ACNTA T+I LRS F +G VPAIK AA T SG IS+L+TP T++R
Sbjct: 62 FEPSMIIVACNTASTIILPHLRSRF-DFPVVGTVPAIKLAAELTASGHISVLATPGTVQR 120
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
YT +LI + S ++ LV + +A E + + + +K EIE CF+++ G RTDV
Sbjct: 121 DYTRSLISEFASTVNVRLVGAEKMAGLAEHFMLTGETDTEAVKSEIEDCFVDQYGARTDV 180
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VLACTHYP + +V+R+L+PWPVDWL+ +++IAR A+ LLP + D A F G
Sbjct: 181 VVLACTHYPFLTNVYRRLAPWPVDWLNPAEAIARHAKSLLPD-GDQPVKPIQDLAHFTGG 239
Query: 255 KPDIAMRRLMQGFGL 269
KPD+ +RL+ GFGL
Sbjct: 240 KPDVLRQRLLSGFGL 254
>gi|157883967|pdb|2JFN|A Chain A, Crystal Structure Of Escherichia Coli Glutamate Racemase
In Complex With L-Glutamate And Activator Udp-Murnac-Ala
Length = 267
Score = 217 bits (554), Expect = 9e-55, Method: Composition-based stats.
Identities = 82/260 (31%), Positives = 141/260 (54%), Gaps = 4/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + +
Sbjct: 2 RPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQ 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T+
Sbjct: 62 ERYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTV 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R+YT LI + ++C I ++ S + E G + D +K+ + KE
Sbjct: 121 KRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP-- 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PL+ Q+ P +D+ +IARR LL + A +
Sbjct: 179 DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCM 238
Query: 253 SGKP-DIAMRRLMQGFGLKS 271
+ P + ++Q +G ++
Sbjct: 239 AMTPGAEQLLPVLQRYGFET 258
>gi|325499291|gb|EGC97150.1| glutamate racemase [Escherichia fergusonii ECD227]
Length = 262
Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats.
Identities = 83/256 (32%), Positives = 138/256 (53%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEEFIVERVVAIVTAVQERYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y
Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S + E G + D +K+ + KE D +V
Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A + P
Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMDMTP 238
Query: 257 D-IAMRRLMQGFGLKS 271
+ + ++Q +G K+
Sbjct: 239 EAEQLLPVLQRYGFKT 254
>gi|157147233|ref|YP_001454552.1| glutamate racemase [Citrobacter koseri ATCC BAA-895]
gi|157084438|gb|ABV14116.1| hypothetical protein CKO_03024 [Citrobacter koseri ATCC BAA-895]
Length = 260
Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats.
Identities = 82/256 (32%), Positives = 137/256 (53%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPNLHYIYAFDNVAFPYGEKSEAFIVERVVEIVTAVQQRYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T T++R Y
Sbjct: 62 LSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRPY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S L E G + +E+++ + E D +V
Sbjct: 121 THELIARFANECQIAMLGSAELVELAEAKLHGEPVSLEELRRILRPWLRMPEPP--DTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSAEANIAFCMAMTP 238
Query: 257 D-IAMRRLMQGFGLKS 271
+ + ++Q +G ++
Sbjct: 239 ETEQLIPVLQRYGFET 254
>gi|238923092|ref|YP_002936605.1| glutamate racemase [Eubacterium rectale ATCC 33656]
gi|238874764|gb|ACR74471.1| glutamate racemase [Eubacterium rectale ATCC 33656]
Length = 258
Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats.
Identities = 57/233 (24%), Positives = 99/233 (42%), Gaps = 4/233 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ VL+ + +MP FIY D PYG ++ +++
Sbjct: 3 IAVFDSGVGGISVLKSLVEVMPNEDFIYYGDSANAPYGTKTLERVRALTCEHAKELILNQ 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA + LR +P + +G PA+K A + ++ + +++TP T+R
Sbjct: 63 HAKGLVVACNTATSAAVRILREQYPDVPIVGIEPAVKPAMLFMENPRVLVMATPMTIREE 122
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L+ Y I + L + VE + D++++ +E D +
Sbjct: 123 KLKKLMDRYRHLGEIIPLPCPGLMNFVER----GDLYGDDVRQYLEELLYSYSHGEIDAV 178
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
VL CTHYP + + +++ V D + AR + L
Sbjct: 179 VLGCTHYPFVRKMIQEVLGDRVRVFDGGNGTAREMKRRLAEKGLLTDSTAAGI 231
>gi|218551040|ref|YP_002384831.1| glutamate racemase [Escherichia fergusonii ATCC 35469]
gi|226722986|sp|B7LUM6|MURI_ESCF3 RecName: Full=Glutamate racemase
gi|218358581|emb|CAQ91229.1| glutamate racemase [Escherichia fergusonii ATCC 35469]
Length = 285
Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats.
Identities = 83/260 (31%), Positives = 142/260 (54%), Gaps = 4/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + +
Sbjct: 21 RPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKNEDFIVERVVEIVTAVQ 80
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++Y L+V+ACNTA T+ LR F + +G VPAIK AA T +G++ +L+T T+
Sbjct: 81 ERYPLALAVVACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGIVGLLATRGTV 139
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R+YT LI + ++C I ++ S + E G + D +K+ + KE
Sbjct: 140 KRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP-- 197
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PL+ Q+ P +D+ +IARR LL + A +
Sbjct: 198 DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCM 257
Query: 253 SGKPD-IAMRRLMQGFGLKS 271
P+ + ++Q +G K+
Sbjct: 258 DMTPEAEQLLPVLQRYGFKT 277
>gi|191169526|ref|ZP_03031256.1| glutamate racemase [Escherichia coli B7A]
gi|193063978|ref|ZP_03045064.1| glutamate racemase [Escherichia coli E22]
gi|193067960|ref|ZP_03048925.1| glutamate racemase [Escherichia coli E110019]
gi|194429405|ref|ZP_03061929.1| glutamate racemase [Escherichia coli B171]
gi|194433275|ref|ZP_03065556.1| glutamate racemase [Shigella dysenteriae 1012]
gi|300902584|ref|ZP_07120560.1| hypothetical protein HMPREF9536_00757 [Escherichia coli MS 84-1]
gi|300926197|ref|ZP_07142003.1| hypothetical protein HMPREF9548_04219 [Escherichia coli MS 182-1]
gi|301324906|ref|ZP_07218467.1| hypothetical protein HMPREF9535_00045 [Escherichia coli MS 78-1]
gi|309797134|ref|ZP_07691531.1| hypothetical protein HMPREF9348_04371 [Escherichia coli MS 145-7]
gi|190900431|gb|EDV60250.1| glutamate racemase [Escherichia coli B7A]
gi|192929443|gb|EDV83051.1| glutamate racemase [Escherichia coli E22]
gi|192958580|gb|EDV89018.1| glutamate racemase [Escherichia coli E110019]
gi|194412552|gb|EDX28850.1| glutamate racemase [Escherichia coli B171]
gi|194418559|gb|EDX34647.1| glutamate racemase [Shigella dysenteriae 1012]
gi|300405344|gb|EFJ88882.1| hypothetical protein HMPREF9536_00757 [Escherichia coli MS 84-1]
gi|300417762|gb|EFK01073.1| hypothetical protein HMPREF9548_04219 [Escherichia coli MS 182-1]
gi|300848190|gb|EFK75950.1| hypothetical protein HMPREF9535_00045 [Escherichia coli MS 78-1]
gi|308119213|gb|EFO56475.1| hypothetical protein HMPREF9348_04371 [Escherichia coli MS 145-7]
gi|320180303|gb|EFW55235.1| Glutamate racemase [Shigella boydii ATCC 9905]
gi|320201538|gb|EFW76116.1| Glutamate racemase [Escherichia coli EC4100B]
gi|323155494|gb|EFZ41673.1| glutamate racemase [Escherichia coli EPECa14]
gi|323161254|gb|EFZ47167.1| glutamate racemase [Escherichia coli E128010]
gi|323177993|gb|EFZ63577.1| glutamate racemase [Escherichia coli 1180]
gi|323182072|gb|EFZ67482.1| glutamate racemase [Escherichia coli 1357]
gi|324019672|gb|EGB88891.1| hypothetical protein HMPREF9542_01635 [Escherichia coli MS 117-3]
gi|332083985|gb|EGI89194.1| glutamate racemase [Shigella boydii 5216-82]
gi|332085315|gb|EGI90489.1| glutamate racemase [Shigella dysenteriae 155-74]
Length = 262
Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats.
Identities = 82/256 (32%), Positives = 139/256 (54%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEEFIVERVVAIVTAVQERYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y
Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S + E G + D +K+ + KE D +V
Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238
Query: 257 D-IAMRRLMQGFGLKS 271
+ + ++Q +G ++
Sbjct: 239 EAEQLLPVLQRYGFET 254
>gi|291528592|emb|CBK94178.1| glutamate racemase [Eubacterium rectale M104/1]
Length = 258
Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats.
Identities = 57/233 (24%), Positives = 99/233 (42%), Gaps = 4/233 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ VL+ + +MP FIY D PYG ++ +++
Sbjct: 3 IAVFDSGVGGISVLKSLVEVMPNEDFIYYGDSANAPYGTKTLERVRALTCEHAKELILNQ 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA + LR +P + +G PA+K A + ++ + +++TP T+R
Sbjct: 63 HAKGLVVACNTATSAAVRILREQYPDVPIVGIEPAVKPAMLFMENPRVLVMATPMTIREE 122
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L+ Y I + L + VE + D++++ +E D +
Sbjct: 123 KLKKLMDRYRHLGEIIPLPCPGLMNFVER----GDLYGDDVRQYLEELLYSYSHGEIDAV 178
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
VL CTHYP + + +++ V D + AR + L
Sbjct: 179 VLGCTHYPFVRKMIQEVLGDRVRVFDGGNGTAREMKRRLAEKGLLTDSTAAGI 231
>gi|324111408|gb|EGC05389.1| glutamate racemase [Escherichia fergusonii B253]
Length = 285
Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats.
Identities = 83/260 (31%), Positives = 142/260 (54%), Gaps = 4/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + +
Sbjct: 21 RPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKNEDFIVERVVEIVTAVQ 80
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++Y L+V+ACNTA T+ LR F + +G VPAIK AA T +G++ +L+T T+
Sbjct: 81 ERYPLALAVVACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGIVGLLATRGTV 139
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R+YT LI + ++C I ++ S + E G + D +K+ + KE
Sbjct: 140 KRSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP-- 197
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PL+ Q+ P +D+ +IARR LL + A +
Sbjct: 198 DTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCM 257
Query: 253 SGKPD-IAMRRLMQGFGLKS 271
P+ + ++Q +G K+
Sbjct: 258 DMTPEAEQLLPVLQRYGFKT 277
>gi|327250613|gb|EGE62321.1| glutamate racemase [Escherichia coli STEC_7v]
Length = 262
Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats.
Identities = 82/256 (32%), Positives = 139/256 (54%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEEFIVERVVAIVTAVQERYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y
Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S + E G + D +K+ + KE D +V
Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238
Query: 257 D-IAMRRLMQGFGLKS 271
+ + ++Q +G ++
Sbjct: 239 EAEQLLPVLQRYGFET 254
>gi|238921669|ref|YP_002935184.1| glutamate racemase [Edwardsiella ictaluri 93-146]
gi|238871238|gb|ACR70949.1| glutamate racemase, putative [Edwardsiella ictaluri 93-146]
Length = 260
Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats.
Identities = 80/257 (31%), Positives = 137/257 (53%), Gaps = 6/257 (2%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V Q++R L+P+ H+IY D+ GFPYG E + +R++ + + + ++
Sbjct: 2 LVFDSGVGGLSVYQEIRALLPDLHYIYAFDNQGFPYGEKEAVFITERVLRIVASLHQRHT 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACNTA T++ LR+ FP +G VPAIK AA T++G++ +L+T AT++R Y
Sbjct: 62 LSAMVVACNTASTIVLPALRARFP-FPVVGVVPAIKPAAKLTRNGIVGLLATRATVQRAY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + + C I ++ S L E G + ++ + + D +V
Sbjct: 121 THELIARFATDCQIKMLGSAELVELAEAKLHGEALDLQRLRTILRPWLTM--AEPPDTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS--G 254
L CTH+PL+ Q+ P +D+ +IARR L+ T + + A + +
Sbjct: 179 LGCTHFPLLRDELAQVLPAGTRLVDSGAAIARRVAWLIANQATLPGKDMRNVA-YATQCD 237
Query: 255 KPDIAMRRLMQGFGLKS 271
A+ +++ G ++
Sbjct: 238 AQTAALLPVLRQLGFET 254
>gi|238021903|ref|ZP_04602329.1| hypothetical protein GCWU000324_01807 [Kingella oralis ATCC 51147]
gi|237866517|gb|EEP67559.1| hypothetical protein GCWU000324_01807 [Kingella oralis ATCC 51147]
Length = 266
Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats.
Identities = 58/262 (22%), Positives = 113/262 (43%), Gaps = 9/262 (3%)
Query: 12 LQ-NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ N I +FDSG+GGL V++ + +P + +Y D PYG ++ +
Sbjct: 1 MNTNPIGVFDSGVGGLTVVRALMERLPNENIVYFGDTARVPYGVKSRSTIETFTAQIVD- 59
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTP 129
L + Q VIACNT + ++ +M L + A + A A T++G I +++T
Sbjct: 60 FLLQNQVKALVIACNTIAAVAHQRVQQMAGNMPVLSVIEAGAQAALATTRNGNIGVIATS 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ + I + + I ++ +L VE ++ + + +
Sbjct: 120 TTVNSNAYARAISARNADTRILSQAAPLLVPLVE----EGWLEHEVTRLTVREYLRPLLA 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDH 248
+ D ++L CTH+PL+ + +Q +P ++ +D+S + A A L + T+ D+
Sbjct: 176 DKIDTLILGCTHFPLLKPLIKQEAP-HIELVDSSTTTAEAAAQALATADLLNTQTAAPDY 234
Query: 249 ALFLSGKPDIAMRRLMQGFGLK 270
++S P + G
Sbjct: 235 RFYVSDIPLRFQTIGERFLGRS 256
>gi|317494788|ref|ZP_07953200.1| glutamate racemase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316917390|gb|EFV38737.1| glutamate racemase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 286
Score = 217 bits (554), Expect = 1e-54, Method: Composition-based stats.
Identities = 82/261 (31%), Positives = 139/261 (53%), Gaps = 5/261 (1%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ + L+FDSG+GGL V Q++R L+P+ H+IY D+ GFPYG ++ + +R++ ++
Sbjct: 23 TAKPTALVFDSGVGGLSVYQEIRSLLPDLHYIYAFDNQGFPYGEKDEAFIIERVVKTVAE 82
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+ ++ + +IACNTA T+ LR F S +G VPAIK AA T++G++ +L+T A
Sbjct: 83 VQKRHPLSIVIIACNTASTITLPALRERF-SFPIVGVVPAIKPAAKLTRNGVVGLLATKA 141
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++R+YT +LI + + C I ++ S L E G I +KK + +
Sbjct: 142 TVQRSYTHDLIARFATDCDIKMLGSSELVVLAEAKLHGEVIDHAVLKKILRPWLSM--AE 199
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHA 249
D +VL CTH+PL+ + P +D+ +IARR L+ + NT T +A
Sbjct: 200 PPDTVVLGCTHFPLLREELAAVLPDGTRLVDSGAAIARRVAWLIANQENTLSTEDDVAYA 259
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
+ + + ++ G
Sbjct: 260 TKTNSDTEALL-PVLHRMGFS 279
>gi|228471912|ref|ZP_04056682.1| glutamate racemase [Capnocytophaga gingivalis ATCC 33624]
gi|228276764|gb|EEK15470.1| glutamate racemase [Capnocytophaga gingivalis ATCC 33624]
Length = 260
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 61/252 (24%), Positives = 115/252 (45%), Gaps = 9/252 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + I +FDSG+GG + +++ +P +Y+AD + PYG + ++
Sbjct: 1 MISPIGLFDSGVGGTTIWREVVRQLPWESTLYLADSLNAPYGEKSSEEIIALCEKN-TEY 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + L ++ACNTA T LR+ + + F+G PAIK A Y+Q+ I +L+T +T
Sbjct: 60 LLDHHSKLIIVACNTATTNAITHLRAKYK-VPFIGIEPAIKPAGLYSQTKTIGVLATQST 118
Query: 132 LRRTYTSNLIHS-YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
L+ + +N ++ + L +E KI E+ +E +
Sbjct: 119 LKSAFFANTCQQLLDKGINVLKQEGIGLVPLIE----EGKIDTPEMMALLEQYLRPMVAE 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF--DDH 248
D +VL CTHYP + + ++ P V +D++ ++A++ +L + N + H
Sbjct: 175 GMDYLVLGCTHYPYLTSLISEILPENVRIMDSAQAVAKQTERILSQNNLLAKKEEHVPSH 234
Query: 249 ALFLSGKPDIAM 260
+ +I
Sbjct: 235 LWLTNKNAEILQ 246
>gi|146339801|ref|YP_001204849.1| glutamate racemase [Bradyrhizobium sp. ORS278]
gi|146192607|emb|CAL76612.1| glutamate racemase [Bradyrhizobium sp. ORS278]
Length = 265
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 105/262 (40%), Positives = 150/262 (57%), Gaps = 5/262 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ +IL+FDSG+GGL VL+++ P+ H++YVADD FPYG+ + AL R++ L
Sbjct: 1 MTHRPTILVFDSGLGGLSVLREVVRARPDAHYVYVADDAFFPYGHHSEPALVARVVPLMG 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+++ ++P L VIACNTA LR+ + + F+G VPAIK A A +++ +S+L T
Sbjct: 61 ELISAHRPDLIVIACNTASVQTLAPLRAAYAT-PFVGTVPAIKPACAQSRTKRVSVLGTK 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT++R YT LI + C + LV S LAS E G + +D I EI CF G
Sbjct: 120 ATVQREYTHALIRDFAQGCAVTLVGSPELASLAEAALSGTGVSDDAIAMEIAPCFTGDAG 179
Query: 190 ---KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
RTD +VLACTHYPL++ ++L+PWPV W+D + +IARR LL +
Sbjct: 180 DPTARTDAVVLACTHYPLLLDRLQRLAPWPVAWIDPAPAIARRVVDLLGPQSGRVDHG-G 238
Query: 247 DHALFLSGKPDIAMRRLMQGFG 268
+F S KP R L FG
Sbjct: 239 ATMIFTSNKPHQLSRVLTPYFG 260
>gi|91976246|ref|YP_568905.1| glutamate racemase [Rhodopseudomonas palustris BisB5]
gi|91682702|gb|ABE39004.1| glutamate racemase [Rhodopseudomonas palustris BisB5]
Length = 266
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 108/256 (42%), Positives = 154/256 (60%), Gaps = 4/256 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL+FDSG+GGL VL+++ P+ H Y ADD FPYG + AL R++ L +++D +
Sbjct: 7 ILVFDSGLGGLTVLREIVKARPDAHVTYAADDAFFPYGQHSEEALVGRVVPLIGELIDAH 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
P L VIACNTA TL+ LR+ + S+ F+G VPAIK A A +++ +S+L T T++R
Sbjct: 67 TPALVVIACNTASTLVLSHLRAAY-SVPFVGTVPAIKPACAASKTKRVSVLGTSGTVKRE 125
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + C + LV S LA+ E G + ++ I+ EI CF++ +G RTD I
Sbjct: 126 YTRALIRDFAGGCDVTLVGSAHLAALAEAALGGADVADEAIRAEIAPCFVDADGSRTDTI 185
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVFDDHALFL 252
VLACTHYPL++ +L+PWPVDW+D + +IARR LL + HQ+ +F
Sbjct: 186 VLACTHYPLLLDRLMRLAPWPVDWIDPAPAIARRVVTLLGPGSGQSDHQSDHPGAEMVFT 245
Query: 253 SGKPDIAMRRLMQGFG 268
SG+P L FG
Sbjct: 246 SGRPPRFTAALAPYFG 261
>gi|145641879|ref|ZP_01797454.1| glutamate racemase [Haemophilus influenzae R3021]
gi|145273501|gb|EDK13372.1| glutamate racemase [Haemophilus influenzae 22.4-21]
Length = 269
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 76/263 (28%), Positives = 130/263 (49%), Gaps = 5/263 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K+ + ++L FDSG+GG V ++ + L+P +H++Y D+ GFPY E+ ++ R +
Sbjct: 4 KEKRPTVLFFDSGVGGFSVYREAKKLLPNWHYLYCFDNAGFPYSEREEESIIHRTLAACQ 63
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T
Sbjct: 64 LINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKSASEITKTKHIGLLATK 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++R Y LI + C + + + L E+ G + +K E+
Sbjct: 123 GTVKRHYVDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPWAGM--- 179
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D +VL CTH+PLI + P ++D S +IA+R + LL N +
Sbjct: 180 ADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQAQNEKYNQM 239
Query: 250 LFLSGKPDI-AMRRLMQGFGLKS 271
+ P+ ++ + +G +S
Sbjct: 240 FCTAHFPEESQFKKALHLWGFES 262
>gi|52425789|ref|YP_088926.1| glutamate racemase [Mannheimia succiniciproducens MBEL55E]
gi|52307841|gb|AAU38341.1| MurI protein [Mannheimia succiniciproducens MBEL55E]
Length = 271
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 75/264 (28%), Positives = 132/264 (50%), Gaps = 5/264 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+++ +IL FDSG+GG V ++++ L+P H++Y D+ FPY + + +R + +
Sbjct: 4 NTEIKPTILFFDSGVGGFSVYKEVKQLLPNAHYLYCFDNAFFPYSEKSEEVIIERTLTVC 63
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
I ++Y VIACNTA T++ LR F ++ +G VPAIK AA +Q+ I +L+T
Sbjct: 64 KKINEQYPLDAIVIACNTASTVVLPTLRQHF-AIPIIGTVPAIKPAAEKSQTKHIGLLAT 122
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++RTY ++LI Y C + + S LA E G + ++ E+ +
Sbjct: 123 KGTVKRTYVTSLIERYAQDCIVEKIGSTKLAEIAERKLHGESVDLIALRNELTPWI---Q 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
D ++L CTH+PLI + P + + +IA+R LL I D+
Sbjct: 180 LSDLDSVILGCTHFPLIKEEIQLCLPQVKFYFEPGTAIAKRVFDLLAGITPKDKTETDNC 239
Query: 249 ALFLSG-KPDIAMRRLMQGFGLKS 271
+ + + + ++ +G K+
Sbjct: 240 IFYTKHFELEDKFIQALRFWGFKN 263
>gi|171059222|ref|YP_001791571.1| glutamate racemase [Leptothrix cholodnii SP-6]
gi|170776667|gb|ACB34806.1| glutamate racemase [Leptothrix cholodnii SP-6]
Length = 272
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 68/256 (26%), Positives = 114/256 (44%), Gaps = 9/256 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ + L+P +YVAD PYG +++R + + + L
Sbjct: 12 IGVFDSGLGGLSVLRAIHELLPSATLMYVADSGHAPYGERSVAYVEERSLRIAA-FLRDQ 70
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA LR A +G P IK AAA T++G I +L+T TLR
Sbjct: 71 GAQVLVVACNTATAAAVQALRMHHRDWAIVGVEPGIKPAAAMTRNGRIGVLATEGTLRSD 130
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L ++ + + L + LA+ +E + + + ++ C + D +
Sbjct: 131 RFKLLAQAHAAHVELFLQACPGLAAAIE----SGALTSPAVTERVQTCCAPLREHQVDTV 186
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL-LPR---INTHQTRVFDDHALF 251
VL CTHYP + + V +D +D++ARR L L + + ++
Sbjct: 187 VLGCTHYPFVANQIAAALGPDVVLIDTADAVARRTLALSLAQAAPDDDLNQDDRPVTRMW 246
Query: 252 LSGKPDIAMRRLMQGF 267
+G + +
Sbjct: 247 TTGDRLLLANVAERWL 262
>gi|121534586|ref|ZP_01666408.1| glutamate racemase [Thermosinus carboxydivorans Nor1]
gi|121306838|gb|EAX47758.1| glutamate racemase [Thermosinus carboxydivorans Nor1]
Length = 269
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 58/251 (23%), Positives = 103/251 (41%), Gaps = 7/251 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I + DSGIGGL V++++ LMP+ HFIY D PYG+ + + + +
Sbjct: 6 PIGVCDSGIGGLTVVKELLELMPDEHFIYFGDTARIPYGDRPPAEILTFMRQIL-RFFTE 64
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ + V+ACNT + D FP +G I+ A A ++SG I +++T AT+
Sbjct: 65 QKVKMVVVACNTMTAVGLDMAWREFP-FPVVGVNTGIRSALAASRSGRIGVIATQATVAS 123
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ ++ + L + L +E +++ ++ + D
Sbjct: 124 GLHERTAKAIDAKAVVALQACPKLVPLIER----EQLEGPAVEAAVAEYLRPLRDAGVDA 179
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
++L CTHYP I V + V ++ + A A LL + + S
Sbjct: 180 LILGCTHYPFISPVISRYLGPAVTIVNPARETALDAVSLLAEYDL-RGNGPGSVRFCFSA 238
Query: 255 KPDIAMRRLMQ 265
+ A R +
Sbjct: 239 DLERARRLAAR 249
>gi|226941421|ref|YP_002796495.1| glutamate racemase [Laribacter hongkongensis HLHK9]
gi|226716348|gb|ACO75486.1| MurI [Laribacter hongkongensis HLHK9]
Length = 272
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 58/262 (22%), Positives = 110/262 (41%), Gaps = 9/262 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSGIGGL V++ + +P +Y D PYG ++ + +L
Sbjct: 6 RRPIGVFDSGIGGLTVVRALMDRLPFEDILYFGDSARVPYGTKSVATIQHYTREIAEFLL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELR--STFPSMAFLGAVPA-IKQAAAYTQSGLISILSTP 129
+ +IACNT + D +R + + L + A + A A ++SG I +++TP
Sbjct: 66 AR-DVKALIIACNTMAAVAADVVRSVAEPLGVPVLDVIDAGSQAAVAASRSGEIGVIATP 124
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ + IH Q ++ + + VEE + ++ ++ +E
Sbjct: 125 TTINANAYARAIHVMNPQARLYSQACPLFVPLVEEGWLDHPVTRLTAEEYLKTVLVE--- 181
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-H 248
D +VL CTHYPL+ + ++ V +D++ + A+ L R+ + +
Sbjct: 182 -EVDTLVLGCTHYPLLKPLLADVAGPGVQLVDSAVTTAQATAATLERLGLLNPPAAETYY 240
Query: 249 ALFLSGKPDIAMRRLMQGFGLK 270
F++ P + G
Sbjct: 241 RYFVTDIPLKFQTIGERFLGRS 262
>gi|282855013|ref|ZP_06264345.1| glutamate racemase [Propionibacterium acnes J139]
gi|282581601|gb|EFB86986.1| glutamate racemase [Propionibacterium acnes J139]
gi|314982112|gb|EFT26205.1| glutamate racemase [Propionibacterium acnes HL110PA3]
gi|315090351|gb|EFT62327.1| glutamate racemase [Propionibacterium acnes HL110PA4]
Length = 284
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 104/260 (40%), Gaps = 8/260 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + I IFDSG GGL V + + LMP +Y+ D PYG +++ +
Sbjct: 9 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTMADVRRYALQCLDR- 67
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + +IACNTA + + + R + +PA ++A+A T++G I ++ T AT
Sbjct: 68 LVAHGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVICTEAT 127
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
R + + + + + VEE E++ +
Sbjct: 128 ARSLSYEDALAAV-PGITLTTQACPKFVPFVEEGITSG----PELEAIAREYLAPIQEAG 182
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ + + V + +S AR + L+ + + F
Sbjct: 183 CDTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMVESGLLHSHPRESSRYF 242
Query: 252 -LSGKPDIAMRRLMQGF-GL 269
+G + + + G
Sbjct: 243 LTTGNAERFEKLGRRLMEGF 262
>gi|150003444|ref|YP_001298188.1| glutamate racemase [Bacteroides vulgatus ATCC 8482]
gi|254881258|ref|ZP_05253968.1| glutamate racemase [Bacteroides sp. 4_3_47FAA]
gi|294777674|ref|ZP_06743125.1| glutamate racemase [Bacteroides vulgatus PC510]
gi|319640260|ref|ZP_07994985.1| glutamate racemase [Bacteroides sp. 3_1_40A]
gi|149931868|gb|ABR38566.1| glutamate racemase [Bacteroides vulgatus ATCC 8482]
gi|254834051|gb|EET14360.1| glutamate racemase [Bacteroides sp. 4_3_47FAA]
gi|294448742|gb|EFG17291.1| glutamate racemase [Bacteroides vulgatus PC510]
gi|317388035|gb|EFV68889.1| glutamate racemase [Bacteroides sp. 3_1_40A]
Length = 281
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 64/270 (23%), Positives = 104/270 (38%), Gaps = 11/270 (4%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P I +FDSG GGL +L K+R LMPEY +IY+ D PYG + + +
Sbjct: 3 PSILPSTGPIGVFDSGYGGLTILDKIRGLMPEYDYIYLGDSARCPYGPRSFEVVYEFTLQ 62
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLG------AVPAIKQAAAYTQS 120
S L + L ++ACNTA ++ + P + T+S
Sbjct: 63 AVSK-LFELGCPLVILACNTASAKALRTIQQINLPVIDATRRVLGVIRPTAECIGEITRS 121
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+ IL+T T++ IH + + + S VE + + +K+ I
Sbjct: 122 RHVGILATAGTIKSESYLLEIHKLSPDIVVTGEACPMWVSLVENNEYQSEGADYFVKQHI 181
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ D I+L CTHYPL++ RQ +P P+ + + +AR R L R
Sbjct: 182 NRLLD--KDPMIDTIILGCTHYPLLLDKIRQFTPEPIRIISQGEYVARSLRDYLNRHPEM 239
Query: 241 --QTRVFDDHALFLSGKPDIAMRRLMQGFG 268
+ + + + G
Sbjct: 240 DARCDKGGNCRFLTTESENKFEESASIFLG 269
>gi|332530565|ref|ZP_08406502.1| glutamate racemase [Hylemonella gracilis ATCC 19624]
gi|332039971|gb|EGI76360.1| glutamate racemase [Hylemonella gracilis ATCC 19624]
Length = 276
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 73/264 (27%), Positives = 113/264 (42%), Gaps = 5/264 (1%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+ P + ++ I +FDSGIGGL VLQ + +P ++YVAD PYG E +
Sbjct: 5 ASSAPA-RTSESPIGVFDSGIGGLSVLQALHAELPHQRYVYVADSGHAPYGEREPQHVID 63
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R M + ++ ++ V+ACNTA + LR+ P + +G PAIK AA ++++
Sbjct: 64 RTMAVAEYLVARHGIQALVVACNTATAIAIHLLRAEHPHLPLVGLEPAIKPAAQHSRNHR 123
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +L+T TL+ L S Q L LA +E G
Sbjct: 124 VGVLATRGTLQSEKFRVLHASLAQQAEFVLQPCDGLAGAIERQDEERIATLSAQYASALG 183
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
G D +VL CTHYPLI R L V +++ +AR+ R +LP I
Sbjct: 184 PCGTAPG-CIDTVVLGCTHYPLITSQLRALLGPDVVMIESGAPVARQTRRVLPHIG---D 239
Query: 243 RVFDDHALFLSGKPDIAMRRLMQG 266
+ +G+ +
Sbjct: 240 AGTPSTVYYTTGQIGALQAAARRW 263
>gi|149927946|ref|ZP_01916196.1| glutamate racemase [Limnobacter sp. MED105]
gi|149823385|gb|EDM82618.1| glutamate racemase [Limnobacter sp. MED105]
Length = 278
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 69/267 (25%), Positives = 124/267 (46%), Gaps = 10/267 (3%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + ++ +FDSG+GGL VL+ M +P F +VAD+ PYG+ H + R++
Sbjct: 4 PVLLESARAVGVFDSGVGGLSVLKAMLNYLPAERFRFVADERYLPYGDKPQHEITDRVLT 63
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
L S+ L + V+ACNTA ++ R+ + +G PA+K A+ T++G++ IL
Sbjct: 64 L-SNWLRNQECKAMVMACNTATAAGANQARAAHANWPIVGIEPAVKPASMLTKTGVVGIL 122
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T T+ L+ + + L +E+ + E I+ ++ E
Sbjct: 123 ATTNTVASERFKGLVERFDPLAKVIAHPCPGLVELIEQ----SPMPEPAIEALLKPVLAE 178
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF- 245
K DVIVL CTHYP + H+ +L+ V ++ +A++ + L
Sbjct: 179 LLQKNADVIVLGCTHYPFVAHLISKLAGPDVTVIETGLPVAKQLKTRLESEGLLNMGEAH 238
Query: 246 ----DDHALFLSGKPDIAMRRLMQGFG 268
+ + F +G+P+ +L+ G
Sbjct: 239 LPMIERVSFFTTGQPEAFKTKLVNLLG 265
>gi|115352286|ref|YP_774125.1| glutamate racemase [Burkholderia ambifaria AMMD]
gi|115282274|gb|ABI87791.1| glutamate racemase [Burkholderia ambifaria AMMD]
Length = 287
Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats.
Identities = 68/275 (24%), Positives = 110/275 (40%), Gaps = 10/275 (3%)
Query: 1 MKIDNYPCEKKLQN--SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58
M + + P + + +FDSG+GGL VL+ +R +P F+YVAD PYG ++
Sbjct: 1 MTMTHQPAASGARPAGPVGLFDSGLGGLSVLRAVRAHLPGESFVYVADSQHAPYGPRDEA 60
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ +R + + + L + VIACNTA +R S+ +G P IK AAA +
Sbjct: 61 FITERTLAI-GEWLAREGAKALVIACNTATARAIAAIRERL-SIPLVGVEPGIKPAAALS 118
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
+G+ +L+T +TL L+ Y + L +E ++
Sbjct: 119 TTGVAGVLATQSTLNSPRFQALLDRYGAGRRFICQPGHGLVEAIERGDTN----SPALRT 174
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+E D +VL CTHYP R + + +D SD+IAR+ +L
Sbjct: 175 LLERYLQPMLDDGADTLVLGCTHYPFFTETIRDIVGDRLTIVDTSDAIARQLARVLDERG 234
Query: 239 THQTRV--FDDHALFLSGKPDIAMRRLMQGFGLKS 271
+G GL +
Sbjct: 235 LRAPAGTRAAPPRFCSTGDGRQLHALASTLLGLDA 269
>gi|319407232|emb|CBI80871.1| Glutamate racemase [Bartonella sp. 1-1C]
Length = 270
Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 127/256 (49%), Positives = 173/256 (67%), Gaps = 1/256 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ S+L FDSGIGGL +L+++R + EY FIY+AD+ GFPYG WE+ LK+R++ +F+ +L
Sbjct: 3 EQSLLFFDSGIGGLTILREVRLFVSEYQFIYIADNEGFPYGIWEEEILKRRILKIFTYLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ Y P L VIACNTA TL+ +LR FP++ F+G VPAIK AA T+SG+IS+L+TP+T+
Sbjct: 63 ELYNPALCVIACNTASTLMIKDLRRAFPNIRFVGTVPAIKLAAEQTKSGVISVLATPSTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R YT LI+S+ QCH+ LV S LA E Y G I +E+ EI CFIEK GK T
Sbjct: 123 RCAYTHELINSFAGQCHVQLVGSEKLAGFAESYLHGYPINHEELHHEILPCFIEKNGKLT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHALF 251
D +VLACTHYP ++++FR+ + WPVDW+D + +IA+ R LLP I + D ALF
Sbjct: 183 DTVVLACTHYPFLINLFREQALWPVDWIDPAKAIAKHIRSLLPINIQNKNMKKHTDFALF 242
Query: 252 LSGKPDIAMRRLMQGF 267
S A L+Q F
Sbjct: 243 TSQNISPATENLLQKF 258
>gi|319405660|emb|CBI79283.1| Glutamate racemase [Bartonella sp. AR 15-3]
Length = 270
Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 125/256 (48%), Positives = 175/256 (68%), Gaps = 1/256 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L FDSGIGGL +L+++R + EY FIYVADD GFPYG WE+ L+ R++ +F+ +L
Sbjct: 3 EQPLLFFDSGIGGLTILREVRLFVSEYQFIYVADDAGFPYGIWEEEMLRHRILKIFTYLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ Y P L VIACNTA TL+ ++LR FP++ F+G VPAIK AA T+SG+IS+L+TP T+
Sbjct: 63 ELYNPALCVIACNTASTLMIEDLRREFPNIHFVGTVPAIKLAAEQTKSGVISVLATPGTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT LI+S+ QC++ LV S LA E Y G I +E++ EI CFIEK GK T
Sbjct: 123 KRAYTHELINSFAGQCYVQLVGSEKLAGFAENYLRGYPINYEELRHEILPCFIEKNGKLT 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHALF 251
D+IVLACTHYP ++++FR+ + WPVDW+D + +IA+ R LLP +I + + D LF
Sbjct: 183 DIIVLACTHYPFLINLFREQALWPVDWIDPAKAIAKHIRSLLPMKIQNKNMKEYTDFTLF 242
Query: 252 LSGKPDIAMRRLMQGF 267
S + L+Q F
Sbjct: 243 TSQNISPSTENLLQKF 258
>gi|60680023|ref|YP_210167.1| putative glutamate racemase [Bacteroides fragilis NCTC 9343]
gi|265765173|ref|ZP_06093448.1| glutamate racemase [Bacteroides sp. 2_1_16]
gi|60491457|emb|CAH06207.1| putative glutamate racemase [Bacteroides fragilis NCTC 9343]
gi|263254557|gb|EEZ25991.1| glutamate racemase [Bacteroides sp. 2_1_16]
Length = 280
Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 58/261 (22%), Positives = 109/261 (41%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L K+R +PEY +IY+ D+ PYG + + + + L +
Sbjct: 11 PIGVFDSGYGGLTILSKIREALPEYDYIYLGDNARTPYGTRSFEIVYEFTLQAVNK-LFE 69
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ACNTA + ++L + P LG + P + + TQ+ + IL+T
Sbjct: 70 MGCHLVILACNTASAKALRTIQMNDLPNIDPDRRVLGVIRPTAECIGSMTQTRHVGILAT 129
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ +H + + + VE + + I+K I+ +
Sbjct: 130 AGTIKSESYPLEVHKLFEDIKVSGEACPMWVPLVENNEANGEGADFFIRKYIDNLLA--K 187
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT--HQTRVFD 246
++ D +VL CTHYP+++ ++ P V + + +A + L R +
Sbjct: 188 DRQIDTLVLGCTHYPILLPKIQKFIPQGVKVVAQGEYVATSLKDYLHRHPEMDMKCTREG 247
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ + D +
Sbjct: 248 KCRFYTTEAEDKFIESASMFL 268
>gi|149369705|ref|ZP_01889557.1| glutamate racemase [unidentified eubacterium SCB49]
gi|149357132|gb|EDM45687.1| glutamate racemase [unidentified eubacterium SCB49]
Length = 263
Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 61/255 (23%), Positives = 108/255 (42%), Gaps = 7/255 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ NSI +FDSG+GG + +++ L+P + +Y+AD + PYGN + + +
Sbjct: 1 MQQTNSIGLFDSGVGGTSIWKEINALLPFENTLYLADSLNAPYGNKTRDEIIHLSIKN-T 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L + V+ACNTA T + LR + + +G PA+K AA T++ I IL+T
Sbjct: 60 EFLLNKNCKMIVVACNTATTNAINILREKY-DIPIIGIEPAMKPAALQTKTKSIGILATK 118
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
TL + + + L +E+ KI E+ + +
Sbjct: 119 GTLSSNLFHKTAAKFTKDISVIEIIGEGLVPLIEQ----GKIHTPELTELLFKYTEPMVA 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDH 248
D +VL C+HYP ++ + P + +D+ ++AR+ R +L T
Sbjct: 175 ASIDHLVLGCSHYPYLIPKLLTILPDNITIIDSGAAVARQTRSVLENNGILNTLEEKPTL 234
Query: 249 ALFLSGKPDIAMRRL 263
+ L
Sbjct: 235 QFLTNSDSATLKMLL 249
>gi|327395709|dbj|BAK13131.1| glutamate racemase MurI [Pantoea ananatis AJ13355]
Length = 241
Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 79/227 (34%), Positives = 131/227 (57%), Gaps = 3/227 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
L+ ++L+FDSG+GGL V ++R L+P+ H++Y D+ GFPYG + + +R++ +
Sbjct: 18 SDLRPTVLVFDSGVGGLSVYDEVRQLLPDLHYLYAFDNAGFPYGEKTETFIVERVVAIVD 77
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
I ++ L +IACNTA T+ LR F + +G VPAIK AA T++G++ +L+T
Sbjct: 78 AITRRHPISLVIIACNTASTVTLPALRERF-AFPVVGVVPAIKPAARLTRNGVVGLLATR 136
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+RR+YT L+ + C I ++ S L E G ++ DEI++ ++
Sbjct: 137 ATVRRSYTHELVSQFAKTCKIEMLGSAELVELAEAKLHGEEVSIDEIRRIVQPWLRM--A 194
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
+ D +VL CTH+PL+ +Q+ P +D+ +IARR LL +
Sbjct: 195 EPPDTVVLGCTHFPLLRDELQQILPEGTRLIDSGAAIARRTAWLLGK 241
>gi|145633451|ref|ZP_01789181.1| glutamate racemase [Haemophilus influenzae 3655]
gi|229845418|ref|ZP_04465548.1| glutamate racemase [Haemophilus influenzae 6P18H1]
gi|144986014|gb|EDJ92616.1| glutamate racemase [Haemophilus influenzae 3655]
gi|229811614|gb|EEP47313.1| glutamate racemase [Haemophilus influenzae 6P18H1]
Length = 269
Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 76/263 (28%), Positives = 130/263 (49%), Gaps = 5/263 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K+ + ++L FDSG+GG V ++ + L+P +H++Y D+ GFPY E+ ++ R +
Sbjct: 4 KEKRPTVLFFDSGVGGFSVYREAKKLLPNWHYLYCFDNAGFPYSEREEESIIHRTLAACQ 63
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T
Sbjct: 64 LINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKSASEITKTKHIGLLATK 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++R Y LI + C + + + L E+ G + +K E+
Sbjct: 123 GTVKRHYVDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPWAG---T 179
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D +VL CTH+PLI + P ++D S +IA+R + LL N +
Sbjct: 180 ADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQAQNEKYNQM 239
Query: 250 LFLSGKPDI-AMRRLMQGFGLKS 271
+ P+ ++ + +G +S
Sbjct: 240 FCTAHFPEESQFKKALHLWGFES 262
>gi|170703387|ref|ZP_02894167.1| glutamate racemase [Burkholderia ambifaria IOP40-10]
gi|170131707|gb|EDT00255.1| glutamate racemase [Burkholderia ambifaria IOP40-10]
Length = 287
Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 69/275 (25%), Positives = 111/275 (40%), Gaps = 10/275 (3%)
Query: 1 MKIDNYPCEKKLQN--SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58
M + + P ++ + IFDSG+GGL VL+ +R +P F+YVAD PYG ++
Sbjct: 1 MTMTHQPAASGVRPAAPVGIFDSGLGGLSVLRAVRAHLPGESFVYVADSHHAPYGPRDEA 60
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ +R + + + L + VIACNTA +R S+ +G P IK AAA +
Sbjct: 61 FITERTLAI-GEWLAREGAKALVIACNTATARAIAAIRERL-SIPLVGVEPGIKPAAALS 118
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
+G+ +L+T +TL L+ Y + L +E ++
Sbjct: 119 TTGVAGVLATQSTLNSPRFQALLDRYGAGRRFICQPGHGLVEAIERGDTN----SPALRT 174
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+E D +VL CTHYP R + + +D SD+IAR+ +L
Sbjct: 175 LLERYLQPMLDDGADTLVLGCTHYPFFTETIRDIVGDRLMIVDTSDAIARQLARVLDERG 234
Query: 239 THQTRV--FDDHALFLSGKPDIAMRRLMQGFGLKS 271
+G GL +
Sbjct: 235 LRAPAGTRAAPPRFCSTGDGRQLHALASTLLGLDA 269
>gi|226357251|ref|YP_002786991.1| glutamate racemase [Deinococcus deserti VCD115]
gi|226319241|gb|ACO47237.1| putative glutamate racemase [Deinococcus deserti VCD115]
Length = 283
Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 69/263 (26%), Positives = 108/263 (41%), Gaps = 13/263 (4%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ +FDSG+GGL VL ++R MP ++Y+AD P G D ++ S
Sbjct: 1 MSSAAPVGVFDSGVGGLSVLAELRRAMPHEEYLYLADTAHVPIGARSDEEIRDLTDRAVS 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L V+ACNTA LR+ F ++ +G VPA+K A T+SG++ +L+TP
Sbjct: 61 A-LHARGVKGVVVACNTASAFSLSHLRARF-AIPIIGLVPAVKPAVEATRSGVVGVLATP 118
Query: 130 ATLRRTYTSNLIHSYVS--QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TLR T +++I + + S L VE + E + +
Sbjct: 119 GTLRGTLLADVIRQFADPAGVKVLQAVSRELVPLVE----AGQADSSETQAVLREVLSPL 174
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-D 246
D +VL CTHYP + +D+ ++AR R +L N R
Sbjct: 175 VQAGADQLVLGCTHYPFLAGSIHAEFGNCFTLVDSGAAVARHTRRVLAAENLLTARTETG 234
Query: 247 DHALFLSGKPDI----AMRRLMQ 265
++G D + Q
Sbjct: 235 KVTYLVTGDVDAARPVFATLVSQ 257
>gi|284043326|ref|YP_003393666.1| glutamate racemase [Conexibacter woesei DSM 14684]
gi|283947547|gb|ADB50291.1| glutamate racemase [Conexibacter woesei DSM 14684]
Length = 283
Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 56/259 (21%), Positives = 98/259 (37%), Gaps = 9/259 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL VL ++ +P F+Y+ D FPYG+ L+ + +L
Sbjct: 11 DRPIAVFDSGVGGLTVLHELLVSLPSEDFLYLGDTARFPYGDKSQEELRVCSAEIADHLL 70
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL---GAVPAIKQAAAYTQSGLISILSTP 129
L V+AC +A L PA + A T SG I +L+TP
Sbjct: 71 VA-GAKLLVVACGSATAAALPLLEERLAGSGVDVLGVIAPAAQLAVEATASGRIGVLATP 129
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ +N I + + V LA + ++ + + +
Sbjct: 130 ATVASGAYANAIAASDPHVRLESVPCPDLAPII----QSGFPFDERVVETVRRYTAPLRA 185
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDH 248
D ++L THYPL+ + +++ V + + + + R L + R D+
Sbjct: 186 AEVDTVILGSTHYPLVAPMLQRMLGRGVHLVTSGEGVVRSVERALGARDLLNGRDGEGDY 245
Query: 249 ALFLSGKPDIAMRRLMQGF 267
+G + +
Sbjct: 246 RFHCTGDVEAFRTLGTRFL 264
>gi|148359847|ref|YP_001251054.1| glutamate racemase [Legionella pneumophila str. Corby]
gi|296107897|ref|YP_003619598.1| glutamate racemase [Legionella pneumophila 2300/99 Alcoy]
gi|148281620|gb|ABQ55708.1| glutamate racemase [Legionella pneumophila str. Corby]
gi|295649799|gb|ADG25646.1| glutamate racemase [Legionella pneumophila 2300/99 Alcoy]
Length = 272
Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 60/263 (22%), Positives = 109/263 (41%), Gaps = 10/263 (3%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+I +FDSG+GGL VL+ +R +P F+Y+ D PYG +K+ M
Sbjct: 2 NSNKDLAIGVFDSGMGGLTVLRALRDKLPHESFVYLGDTARLPYGTKSPDTVKQYAMQ-M 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF-LGAVPAIKQAAAYTQSGLISILS 127
+ IL + + VIACNTA T L+S + P A + T++ I++L+
Sbjct: 61 AKILVERRIKALVIACNTATTAALPHLQSMLTDIPVLGVVAPGAAAAVSATKNHRIAVLA 120
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+ +LI + + + + +L + EE + + +K ++
Sbjct: 121 TETTIASRAYHDLIIKNLPEAVVSSRACSVLVALAEEGMVTNAVAREALKHYLDDF---- 176
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-- 245
D ++L CTH+P+ + L P V +D++ + A LL N + +
Sbjct: 177 --SDEDAVLLGCTHFPVFKPLLSSLLPKGVAIVDSAQATAISLYELLQNQNLYNDNLEVL 234
Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268
++ + + G
Sbjct: 235 PRINYLVTDSINRFQKVGEIFLG 257
>gi|282880529|ref|ZP_06289236.1| glutamate racemase [Prevotella timonensis CRIS 5C-B1]
gi|281305632|gb|EFA97685.1| glutamate racemase [Prevotella timonensis CRIS 5C-B1]
Length = 292
Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 54/261 (20%), Positives = 97/261 (37%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L +R L+P+Y F+Y+ D+ PYG + + + + L +
Sbjct: 18 PIGVFDSGYGGLTILHSIRRLLPQYDFLYLGDNARAPYGTRSFEVVYEFTLQAVTK-LFE 76
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF------PSMAFLGAVPAIKQAAAYTQSGLISILST 128
L ++ CNTA ++ P + TQS + +L+T
Sbjct: 77 MGCHLVILGCNTASAKALRSIQQNDLPHLDAKRRVLGVIRPTAEIIGKLTQSRHVGLLAT 136
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ I + + V+ VE + +KK ++ +
Sbjct: 137 EGTVKSESYPLEIQKFYPDIQVSGVACPFWVPLVEYNEANSPGADYFVKKRMDALMA--K 194
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFD 246
D I+L CTHYPL++ + + V + + +AR + L R + +
Sbjct: 195 DGAIDTIILGCTHYPLLMAKIEKYNKPGVRIVAQGEYVARSLQDYLYRHPEMEEKCTKNG 254
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
F + P
Sbjct: 255 TCRYFTTENPARFKDSAQIFL 275
>gi|325299201|ref|YP_004259118.1| Glutamate racemase [Bacteroides salanitronis DSM 18170]
gi|324318754|gb|ADY36645.1| Glutamate racemase [Bacteroides salanitronis DSM 18170]
Length = 275
Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 60/266 (22%), Positives = 107/266 (40%), Gaps = 11/266 (4%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I IFDSG GGL +L K+R L+P+Y+++Y+ D+ PYG + + +
Sbjct: 1 MTTTGPIGIFDSGYGGLTILAKIRELLPQYNYLYLGDNARTPYGTRSFEVVYEFTLQAVR 60
Query: 70 DILDKYQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLI 123
L L ++ACNTA + + +L PS LG + P ++ A T + +
Sbjct: 61 K-LFGLGCPLVILACNTASAKALRSIQQHDLPHLDPSRRVLGVIRPTVECIGALTHTRHV 119
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L+T T+R IH + + V + +E + ++K +
Sbjct: 120 GLLATEGTVRSQSYPLEIHKLYADIRLTGVPCPMWVPLIENNEFNSPGADYFVQKYLGQL 179
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
+ D I+L CTHYPL++ R+ +P + ++ +A + L R +TR
Sbjct: 180 LSQ--DPEIDTIILGCTHYPLLLEKIRRYTPSHIRLVEQGKYVASSLKDYLARHPELRTR 237
Query: 244 --VFDDHALFLSGKPDIAMRRLMQGF 267
+ +
Sbjct: 238 CETGGTCQFLTTESIEKFQESASIFL 263
>gi|54295149|ref|YP_127564.1| hypothetical protein lpl2229 [Legionella pneumophila str. Lens]
gi|53754981|emb|CAH16469.1| hypothetical protein lpl2229 [Legionella pneumophila str. Lens]
Length = 279
Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 62/271 (22%), Positives = 110/271 (40%), Gaps = 10/271 (3%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M + +I +FDSG+GGL VL+ +R +P F+Y+ D PYG +
Sbjct: 1 MTRRSNQLNSNKDLAIGVFDSGMGGLTVLRALRDKLPHESFVYLGDTARLPYGTKSPDTV 60
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF-LGAVPAIKQAAAYTQ 119
K+ M + IL + + VIACNTA T L+S + P A + T+
Sbjct: 61 KQYAMQ-MAKILVERRIKALVIACNTATTAALPHLQSMLTDIPVLGVVAPGAAAAVSATK 119
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+ I++L+T T+ +LI + + + + +L + EE + + +K
Sbjct: 120 NHRIAVLATETTIASRAYHDLIIKNLPEAVVSTRACSVLVALAEEGMVTNAVAREALKHY 179
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
++ D ++L CTH+P+ + L P V +D++ + A LL N
Sbjct: 180 LDDF------SDEDAVLLGCTHFPVFKPLLSSLLPKDVAIVDSAQATAISLYELLQNQNL 233
Query: 240 HQTR--VFDDHALFLSGKPDIAMRRLMQGFG 268
V ++ + + G
Sbjct: 234 RNDNLEVPPRINYLVTDSINRFQKVGEIFLG 264
>gi|256002760|gb|ACU52625.1| glutamate racemase [Bacillus sp. LL3]
Length = 250
Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 43/237 (18%), Positives = 93/237 (39%), Gaps = 5/237 (2%)
Query: 33 RFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIK 92
+P+ + IYV D PYG + + + + +L+ + + VIACNTA +
Sbjct: 1 MRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWEMTDYLLENHHIKMLVIACNTATAIAL 60
Query: 93 DELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHL 152
++++ P + A T++ I ++ T T++ + + +
Sbjct: 61 EDIQRKTDIPVVGVIQPGARTAIKVTKNQHIGVIGTINTIKSRAYEQALLGLNADLQVEN 120
Query: 153 VSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQL 212
++ +L VE + ++ + +E +G D ++L CTHYP++ +
Sbjct: 121 MACPLLVPFVE----SGRFLQESAAEAVEASLEPLKGTAIDTLILGCTHYPILKDPIQDY 176
Query: 213 SPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALFLSGKPDIAMRRLMQGFG 268
V + + D AR +L ++ +H +G+ + + FG
Sbjct: 177 MGKHVKIISSGDETAREVSTILSYKGLLNQSKHAPEHQFLTTGERNGFAKIAEDWFG 233
>gi|333014021|gb|EGK33381.1| glutamate racemase [Shigella flexneri K-304]
Length = 265
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 82/256 (32%), Positives = 139/256 (54%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y
Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S + E G + D +K+ + KE D +V
Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238
Query: 257 D-IAMRRLMQGFGLKS 271
+ + ++Q +G ++
Sbjct: 239 EAEQLLPVLQRYGFET 254
>gi|212712479|ref|ZP_03320607.1| hypothetical protein PROVALCAL_03574 [Providencia alcalifaciens DSM
30120]
gi|212684695|gb|EEB44223.1| hypothetical protein PROVALCAL_03574 [Providencia alcalifaciens DSM
30120]
Length = 258
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 82/255 (32%), Positives = 134/255 (52%), Gaps = 4/255 (1%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V ++++ L+P H+IY D+ FPYG + + R+ + + I K+
Sbjct: 1 MFDSGVGGLSVYREVKKLIPNAHYIYAFDNEAFPYGEKSEEFIIDRVYQIVNAIAKKHPL 60
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
++VIACNTA T+ LR+ F + +G VPAIK A T++G++ +L+T T+ R YT
Sbjct: 61 TIAVIACNTASTVSLPNLRAHF-TFPIVGVVPAIKPATKLTRNGVVGLLATKGTVNREYT 119
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
LI + + C + + S L E G + DEI + ++ KE D ++L
Sbjct: 120 KELIERFATDCKVISLGSAELVQLAERKLHGEMLPLDEIAQAVKPWLKMKEAP--DTVIL 177
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF-LSGKP 256
CTH+PLIV ++ P ++D+ +IARR L+ +D A L +
Sbjct: 178 GCTHFPLIVEELEKVLPNGTRFIDSGAAIARRTVWLINNQAEVTDSNEEDFAYCLLMNES 237
Query: 257 DIAMRRLMQGFGLKS 271
+R +++ G KS
Sbjct: 238 LQELRPVLEAEGFKS 252
>gi|213609517|ref|ZP_03369343.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-2068]
Length = 233
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 80/235 (34%), Positives = 127/235 (54%), Gaps = 3/235 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 2 LVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R Y
Sbjct: 62 LSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRPY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S L E G + +E+++ + E D +V
Sbjct: 121 THELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEPP--DTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
L CTH+PL+ Q+ P +D+ +IARR LL + A
Sbjct: 179 LGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSTDANIAYC 233
>gi|148827156|ref|YP_001291909.1| glutamate racemase [Haemophilus influenzae PittGG]
gi|166231038|sp|A5UFH0|MURI_HAEIG RecName: Full=Glutamate racemase
gi|148718398|gb|ABQ99525.1| glutamate racemase [Haemophilus influenzae PittGG]
Length = 269
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 75/263 (28%), Positives = 130/263 (49%), Gaps = 5/263 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K+ + ++L FDSG+GG V ++ + L+P +H++Y D+ GFPY ++ ++ R +
Sbjct: 4 KEKRPTVLFFDSGVGGFSVYREAKKLLPNWHYLYCFDNAGFPYSERKEESIIHRTLAACQ 63
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T
Sbjct: 64 LINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLATK 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++R Y LI + C + + + L E+ G + +K E+
Sbjct: 123 GTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSSWAGM--- 179
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D +VL CTH+PLI + P ++D S +IA+R + LL N +
Sbjct: 180 ADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQAQNEKYNQM 239
Query: 250 LFLSGKPDI-AMRRLMQGFGLKS 271
+ P+ ++ + +G +S
Sbjct: 240 FCTAHFPEESQFKKALHLWGFES 262
>gi|253564140|ref|ZP_04841597.1| glutamate racemase [Bacteroides sp. 3_2_5]
gi|251947916|gb|EES88198.1| glutamate racemase [Bacteroides sp. 3_2_5]
gi|301161564|emb|CBW21104.1| putative glutamate racemase [Bacteroides fragilis 638R]
Length = 280
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 58/261 (22%), Positives = 109/261 (41%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L K+R +PEY +IY+ D+ PYG + + + + L +
Sbjct: 11 PIGVFDSGYGGLTILSKIREALPEYDYIYLGDNARTPYGTRSFEIVYEFTLQAVNK-LFE 69
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ACNTA + ++L + P LG + P + + TQ+ + IL+T
Sbjct: 70 MGCHLVILACNTASAKALRTIQMNDLPNIDPDRRVLGVIRPTAECIGSMTQTRHVGILAT 129
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ +H + + + VE + + I+K I+ +
Sbjct: 130 AGTIKSESYPLEVHKLFEDIKVSGEACPMWVPLVENNEASGEGADFFIRKYIDNLLA--K 187
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT--HQTRVFD 246
++ D +VL CTHYP+++ ++ P V + + +A + L R +
Sbjct: 188 DRQIDTLVLGCTHYPILLPKIQKFIPQGVKVVAQGEYVATSLKDYLHRHPEMDMKCTREG 247
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ + D +
Sbjct: 248 KCRFYTTEAEDKFIESASMFL 268
>gi|170782455|ref|YP_001710788.1| glutamate racemase [Clavibacter michiganensis subsp. sepedonicus]
gi|169157024|emb|CAQ02197.1| glutamate racemase 1 [Clavibacter michiganensis subsp. sepedonicus]
Length = 294
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 53/258 (20%), Positives = 93/258 (36%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + L+P IY+ D PYG+ +++ + + D L
Sbjct: 3 DAPIGIFDSGVGGLTVARAVAALLPRESIIYIGDTAHTPYGDKPIADVRRYALAVLDD-L 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACNTA + + R + PA++ A + T++ + +++T AT+
Sbjct: 62 VERGVKMLVIACNTASAAMLRDARERYDIPVVEVIQPAVRTAVSVTRNHRVGVIATHATV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + + VE E+ EG
Sbjct: 122 TSRAYDDAFAA-APHLALTSAEAPDFVGFVERGETSG----PELMSAAEGYLAPLRAAGV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF- 251
D +VL CTHYP + + V + + A+ L + +
Sbjct: 177 DTLVLGCTHYPFLEGAISLIMGPDVTLVSSDTETAKDVYRELVSAGLERRSDAPPVIRYE 236
Query: 252 -LSGKPDIAMRRLMQGFG 268
G + G
Sbjct: 237 ATGGSASDFETLAHRMLG 254
>gi|187732533|ref|YP_001882660.1| glutamate racemase [Shigella boydii CDC 3083-94]
gi|187429525|gb|ACD08799.1| glutamate racemase [Shigella boydii CDC 3083-94]
Length = 262
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 81/256 (31%), Positives = 138/256 (53%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+V+ACNTA T+ LR F +G VPAIK AA T + ++ +L+T T++R+Y
Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANSIVGLLATRGTVKRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S + E G + D +K+ + KE D +V
Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238
Query: 257 D-IAMRRLMQGFGLKS 271
+ + ++Q +G ++
Sbjct: 239 EAEQLLPVLQRYGFET 254
>gi|170680254|ref|YP_001746359.1| glutamate racemase [Escherichia coli SMS-3-5]
gi|293407588|ref|ZP_06651507.1| glutamate racemase [Escherichia coli FVEC1412]
gi|298383336|ref|ZP_06992929.1| glutamate racemase [Escherichia coli FVEC1302]
gi|300896472|ref|ZP_07114999.1| hypothetical protein HMPREF9552_00793 [Escherichia coli MS 198-1]
gi|170517972|gb|ACB16150.1| glutamate racemase [Escherichia coli SMS-3-5]
gi|291425505|gb|EFE98544.1| glutamate racemase [Escherichia coli FVEC1412]
gi|298276370|gb|EFI17890.1| glutamate racemase [Escherichia coli FVEC1302]
gi|300359665|gb|EFJ75535.1| hypothetical protein HMPREF9552_00793 [Escherichia coli MS 198-1]
Length = 262
Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats.
Identities = 82/256 (32%), Positives = 138/256 (53%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQKRYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y
Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S + E G + D +K+ + KE D +V
Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238
Query: 257 D-IAMRRLMQGFGLKS 271
+ + ++Q +G ++
Sbjct: 239 EAEQLLPVLQRYGFET 254
>gi|328949910|ref|YP_004367245.1| Glutamate racemase [Marinithermus hydrothermalis DSM 14884]
gi|328450234|gb|AEB11135.1| Glutamate racemase [Marinithermus hydrothermalis DSM 14884]
Length = 264
Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats.
Identities = 56/254 (22%), Positives = 99/254 (38%), Gaps = 12/254 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GGL VL+ +R +P F+Y D PYG+ +++ + S L +
Sbjct: 9 PIGVFDSGVGGLTVLRALRAALPGEDFLYFGDTARVPYGSKPPALVRQFAWEI-SGFLLR 67
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA ++ +L ++ + PA+ A G + ++ T T++
Sbjct: 68 KGVKAIVVACNTASSVALPDLAASLSVPVYGVLEPAVAAALRV--EGRVGLIGTETTVQS 125
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + + VEE + + ++ K
Sbjct: 126 GAYQARLARAGRA--VWARPCPLFVPLVEEGLWEDGVARLVVAHYLKDA-----PKDLSA 178
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
++L CTHYP + V ++ P V +D+++ AR L F++G
Sbjct: 179 LILGCTHYPYLKPVIAEVLP-GVQLIDSAEVTARVVAEGLEARGLRNPEGAGRVVHFVTG 237
Query: 255 KPDIAMRRLMQGFG 268
P R L G
Sbjct: 238 DPGTY-RVLANRLG 250
>gi|256002758|gb|ACU52624.1| glutamate racemase [Bacillus licheniformis]
Length = 250
Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats.
Identities = 47/237 (19%), Positives = 93/237 (39%), Gaps = 5/237 (2%)
Query: 33 RFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIK 92
+P+ + IYV D PYG + + + L + +L+ + + VIACNTA +
Sbjct: 1 MRQLPKENIIYVGDTKRCPYGPRPEEEVLQYTWELTNYLLENHHIKMLVIACNTATAIAL 60
Query: 93 DELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHL 152
D+++ + P + A T + I ++ T T++ + + +
Sbjct: 61 DDIQRSVGIPVVGVIQPGARAAIKVTDNQHIGVIGTENTIKSNAYEEALLALNPDLKVEN 120
Query: 153 VSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQL 212
++ +L VE K ++ +K + D ++L CTHYP++ ++
Sbjct: 121 LACPLLVPFVESGKFLDKTADEIVKTS----LYPLKDTSIDSLILGCTHYPILKEAIQRY 176
Query: 213 SPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALFLSGKPDIAMRRLMQGFG 268
V+ + + D AR +L + + DH +G D + FG
Sbjct: 177 MGEHVNIISSGDETAREVSTILSYKGLLNQSPIAPDHQFLTTGARDQFAKIADDWFG 233
>gi|323706012|ref|ZP_08117582.1| glutamate racemase [Thermoanaerobacterium xylanolyticum LX-11]
gi|323534626|gb|EGB24407.1| glutamate racemase [Thermoanaerobacterium xylanolyticum LX-11]
Length = 263
Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats.
Identities = 52/252 (20%), Positives = 99/252 (39%), Gaps = 9/252 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL VL+K++ L+P +IY D PYG+ ++ + + +
Sbjct: 3 RRPIGVFDSGVGGLTVLKKLKELLPNEDYIYFGDTKRVPYGDKSKGEIEMYARQIINFM- 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + VIACNT I + + + F + AA T++ + +++T T+
Sbjct: 62 NEKNTKIIVIACNTTCASIDKD---EYKEILFSVLEAGAESAADITKNNKVGVIATTRTV 118
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + + VE+ DE K + +
Sbjct: 119 ESGSYEKSIRLKNGDVDVFQKACPGFVPLVEKGLSE----SDESFKLAKEYLKALNDEGI 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTHYP++++ + + V +D + ++ L + F+
Sbjct: 175 DTLVLGCTHYPILLNAIKNAAREDVLIVDPAVRLSHDVMNYLKENDMLN-LTGGVTHYFV 233
Query: 253 SGKPDIAMRRLM 264
SG +
Sbjct: 234 SGDAKKFVDVAK 245
>gi|187776066|ref|ZP_02800193.2| glutamate racemase [Escherichia coli O157:H7 str. EC4196]
gi|188494268|ref|ZP_03001538.1| glutamate racemase [Escherichia coli 53638]
gi|189010240|ref|ZP_02805903.2| glutamate racemase [Escherichia coli O157:H7 str. EC4076]
gi|189402183|ref|ZP_02780670.2| glutamate racemase [Escherichia coli O157:H7 str. EC4401]
gi|189403088|ref|ZP_02793288.2| glutamate racemase [Escherichia coli O157:H7 str. EC4486]
gi|189404032|ref|ZP_02786646.2| glutamate racemase [Escherichia coli O157:H7 str. EC4501]
gi|189404858|ref|ZP_02811842.2| glutamate racemase [Escherichia coli O157:H7 str. EC869]
gi|208807428|ref|ZP_03249765.1| glutamate racemase [Escherichia coli O157:H7 str. EC4206]
gi|208814014|ref|ZP_03255343.1| glutamate racemase [Escherichia coli O157:H7 str. EC4045]
gi|208818359|ref|ZP_03258679.1| glutamate racemase [Escherichia coli O157:H7 str. EC4042]
gi|209400751|ref|YP_002273491.1| glutamate racemase [Escherichia coli O157:H7 str. EC4115]
gi|217325108|ref|ZP_03441192.1| glutamate racemase [Escherichia coli O157:H7 str. TW14588]
gi|309783926|ref|ZP_07678571.1| glutamate racemase [Shigella dysenteriae 1617]
gi|30043002|gb|AAP18724.1| glutamate racemase [Shigella flexneri 2a str. 2457T]
gi|56384049|gb|AAN45478.2| glutamate racemase [Shigella flexneri 2a str. 301]
gi|187769174|gb|EDU33018.1| glutamate racemase [Escherichia coli O157:H7 str. EC4196]
gi|188489467|gb|EDU64570.1| glutamate racemase [Escherichia coli 53638]
gi|189001518|gb|EDU70504.1| glutamate racemase [Escherichia coli O157:H7 str. EC4076]
gi|189357222|gb|EDU75641.1| glutamate racemase [Escherichia coli O157:H7 str. EC4401]
gi|189362690|gb|EDU81109.1| glutamate racemase [Escherichia coli O157:H7 str. EC4486]
gi|189367934|gb|EDU86350.1| glutamate racemase [Escherichia coli O157:H7 str. EC4501]
gi|189373225|gb|EDU91641.1| glutamate racemase [Escherichia coli O157:H7 str. EC869]
gi|208727229|gb|EDZ76830.1| glutamate racemase [Escherichia coli O157:H7 str. EC4206]
gi|208735291|gb|EDZ83978.1| glutamate racemase [Escherichia coli O157:H7 str. EC4045]
gi|208738482|gb|EDZ86164.1| glutamate racemase [Escherichia coli O157:H7 str. EC4042]
gi|209162151|gb|ACI39584.1| glutamate racemase [Escherichia coli O157:H7 str. EC4115]
gi|217321329|gb|EEC29753.1| glutamate racemase [Escherichia coli O157:H7 str. TW14588]
gi|308928297|gb|EFP73759.1| glutamate racemase [Shigella dysenteriae 1617]
gi|313648865|gb|EFS13304.1| glutamate racemase [Shigella flexneri 2a str. 2457T]
gi|320173014|gb|EFW48236.1| Glutamate racemase [Shigella dysenteriae CDC 74-1112]
gi|320182828|gb|EFW57705.1| Glutamate racemase [Shigella flexneri CDC 796-83]
gi|320190929|gb|EFW65579.1| Glutamate racemase [Escherichia coli O157:H7 str. EC1212]
gi|323167446|gb|EFZ53154.1| glutamate racemase [Shigella sonnei 53G]
gi|326338013|gb|EGD61843.1| Glutamate racemase [Escherichia coli O157:H7 str. 1044]
gi|326342692|gb|EGD66465.1| Glutamate racemase [Escherichia coli O157:H7 str. 1125]
gi|332088274|gb|EGI93394.1| glutamate racemase [Shigella boydii 3594-74]
gi|332751534|gb|EGJ81933.1| glutamate racemase [Shigella flexneri 4343-70]
gi|332751805|gb|EGJ82202.1| glutamate racemase [Shigella flexneri K-671]
gi|332752573|gb|EGJ82959.1| glutamate racemase [Shigella flexneri 2747-71]
gi|332764484|gb|EGJ94716.1| glutamate racemase [Shigella flexneri 2930-71]
gi|332997949|gb|EGK17555.1| glutamate racemase [Shigella flexneri VA-6]
gi|332998392|gb|EGK17990.1| glutamate racemase [Shigella flexneri K-272]
gi|332998878|gb|EGK18472.1| glutamate racemase [Shigella flexneri K-218]
gi|333014084|gb|EGK33441.1| glutamate racemase [Shigella flexneri K-227]
Length = 262
Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats.
Identities = 82/256 (32%), Positives = 139/256 (54%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y
Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S + E G + D +K+ + KE D +V
Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238
Query: 257 D-IAMRRLMQGFGLKS 271
+ + ++Q +G ++
Sbjct: 239 EAEQLLPVLQRYGFET 254
>gi|301170494|emb|CBW30101.1| glutamate racemase [Haemophilus influenzae 10810]
Length = 269
Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats.
Identities = 74/263 (28%), Positives = 129/263 (49%), Gaps = 5/263 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K+ + ++L FDSG+GG V ++ + L+P + ++Y D+ GFPY ++ ++ R +
Sbjct: 4 KEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSERKEESIIHRTLAACQ 63
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T
Sbjct: 64 LINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLATK 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++R Y LI + C + + + L E+ G + +K E+
Sbjct: 123 GTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPWAGM--- 179
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D +VL CTH+PLI + P ++D S +IA+R + LL N +
Sbjct: 180 ADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQAQNEKYNQM 239
Query: 250 LFLSGKPDI-AMRRLMQGFGLKS 271
+ P+ ++ + +G +S
Sbjct: 240 FCTAHFPEESQFKKALHLWGFES 262
>gi|149912317|ref|ZP_01900882.1| glutamate racemase [Moritella sp. PE36]
gi|149804604|gb|EDM64670.1| glutamate racemase [Moritella sp. PE36]
Length = 262
Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats.
Identities = 78/257 (30%), Positives = 126/257 (49%), Gaps = 3/257 (1%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ ILIFDSG+GG+ + + ++ +P ++Y+ D+ FPYG + L R+ L + +
Sbjct: 2 SKILIFDSGVGGISIYKAIKEQLPNADYLYLFDNKYFPYGELDPEFLIDRVCQLIGYMCE 61
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ P L VIACN+A TL+ LR F S+ F+G VPAIK AA ++ I +L+TP T+
Sbjct: 62 NHSPDLVVIACNSASTLVLPALRKRF-SIPFVGVVPAIKPAALQSKKKKIGLLATPGTVS 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT L++ + C I ++ + L + E G + D I + D
Sbjct: 121 REYTQLLVNEHAQDCEIDMIGTTSLVLQAENKLYGHPVDLDAINNVVSKWSDP--QNSPD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
V+VL CTH+PL+V + ++D+ +IA R + +L NT +
Sbjct: 179 VVVLGCTHFPLLVTELEASLGEHIQFIDSGMAIALRVKDILGEKNTVLNTCNIGQSFCTK 238
Query: 254 GKPDIAMRRLMQGFGLK 270
+ + L GL
Sbjct: 239 IQAQKKLTLLFNRIGLS 255
>gi|269140807|ref|YP_003297508.1| glutamate racemase [Edwardsiella tarda EIB202]
gi|267986468|gb|ACY86297.1| glutamate racemase [Edwardsiella tarda EIB202]
gi|304560567|gb|ADM43231.1| Glutamate racemase [Edwardsiella tarda FL6-60]
Length = 260
Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats.
Identities = 80/257 (31%), Positives = 136/257 (52%), Gaps = 6/257 (2%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V Q++R L+P+ H+IY D+ GFPYG E + R++ + + + ++
Sbjct: 2 LVFDSGVGGLSVYQEIRALLPDLHYIYAFDNQGFPYGEKEAAFITDRVLRIVASLHQRHT 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACNTA T++ LR+ FP +G VPAIK AA T++G++ +L+T AT++R Y
Sbjct: 62 LSAMVVACNTASTIVLPALRARFP-FPVVGVVPAIKPAAKLTRNGVVGLLATRATVQRAY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + + C I ++ S L E G + ++ + + D +V
Sbjct: 121 THELIARFATDCQIKMLGSAELVELAEAKLHGEALDLQRLRTILRPWLTM--AEPPDTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS--G 254
L CTH+PL+ Q+ P +D+ +IARR L+ T + + A + +
Sbjct: 179 LGCTHFPLLRDELAQVLPAGTRLVDSGAAIARRVAWLIANQVTLPGKDMRNVA-YATQCD 237
Query: 255 KPDIAMRRLMQGFGLKS 271
A+ +++ G ++
Sbjct: 238 AQTAALLPVLRQMGFET 254
>gi|301023753|ref|ZP_07187492.1| hypothetical protein HMPREF9534_03554 [Escherichia coli MS 69-1]
gi|300396897|gb|EFJ80435.1| hypothetical protein HMPREF9534_03554 [Escherichia coli MS 69-1]
Length = 262
Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats.
Identities = 82/256 (32%), Positives = 138/256 (53%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIITAVQKRYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y
Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S + E G + D +K+ + KE D +V
Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238
Query: 257 D-IAMRRLMQGFGLKS 271
+ + ++Q +G ++
Sbjct: 239 EAEQLLPVLQRYGFET 254
>gi|323339853|ref|ZP_08080122.1| glutamate racemase [Lactobacillus ruminis ATCC 25644]
gi|323092726|gb|EFZ35329.1| glutamate racemase [Lactobacillus ruminis ATCC 25644]
Length = 259
Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats.
Identities = 71/259 (27%), Positives = 111/259 (42%), Gaps = 6/259 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
++ + I IFDSG+GGL VL++ +M +I+ D PYG + + +
Sbjct: 3 SEETKRPIGIFDSGMGGLTVLRECVKIMGNEDYIFYGDSFNAPYGVKSTEQVYRLSKKIV 62
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
L K VIACNTA + LR +P + +G PA+K A + ++ + +++T
Sbjct: 63 QRFL-KQNVKAIVIACNTATSASASRLRKEYPELPIIGLEPALKPAVLHKKNSTVLVMAT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
P TL+ NL++ + Q I + + L VE I E+KK +
Sbjct: 122 PLTLKEKKFENLMNRFEDQAKIIKLPAPDLVEFVERGE----IDTPELKKYLRSILNPYL 177
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
G D +VL CTH+P +Q+ V +D AR R LL N +
Sbjct: 178 GN-IDAVVLGCTHFPFAKRAIQQIVGNDVYVVDGGAGAARELRRLLEAKNERRKENRIGK 236
Query: 249 ALFLSGKPDIAMRRLMQGF 267
FL+ PD L +
Sbjct: 237 IEFLNSNPDPQEIELSKKL 255
>gi|124266488|ref|YP_001020492.1| glutamate racemase [Methylibium petroleiphilum PM1]
gi|124259263|gb|ABM94257.1| glutamate racemase [Methylibium petroleiphilum PM1]
Length = 276
Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats.
Identities = 70/272 (25%), Positives = 119/272 (43%), Gaps = 7/272 (2%)
Query: 1 MKIDNYPCEKKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHA 59
M P + + + I +FDSG+GGL VL+ + +P +YVAD PYG ++
Sbjct: 1 MTNTAAPLDDRPSAACIGVFDSGVGGLSVLRALHRHLPHSRLLYVADSGFAPYGERDEGY 60
Query: 60 LKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119
+ +R L + +L + L V+ACNTA LR + F+G P IK A A ++
Sbjct: 61 VVERSRVLTTHLLRE-GAQLIVVACNTATAAAVRALREEHADVQFVGVEPGIKPAIALSR 119
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
SG I +++T TL L+ S+ +HL + LA +E E+
Sbjct: 120 SGRIGVMATRGTLASDKFRRLVSSHAQGAQLHLQACAGLAHAIEAGDAN----SAEVLAL 175
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
++ D +VL CTHYP + ++ V +D +D++ARR + L+ + +
Sbjct: 176 VDRYTAPLREAAVDTVVLGCTHYPFVAQHIQRALGAGVQLVDTADAVARRVQQLIVGLRS 235
Query: 240 HQTRVFD-DHALFLSGKPDIAMRRLMQGFGLK 270
+ L+ +G + +
Sbjct: 236 ADVQAAARPARLWTTGDLATLTLVAGRWLDFE 267
>gi|225849254|ref|YP_002729418.1| glutamate racemase [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644018|gb|ACN99068.1| glutamate racemase [Sulfurihydrogenibium azorense Az-Fu1]
Length = 260
Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats.
Identities = 57/253 (22%), Positives = 104/253 (41%), Gaps = 10/253 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGGL V +++ P+ Y+ D PYGN + + + + + +
Sbjct: 3 IGIFDSGIGGLTVFKEVAENFPKADIYYLGDTARVPYGNKSKETIIRYSIECATYLYHNF 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L +IACNTA + + L+ P P + A YT++ + ++ T AT++
Sbjct: 63 NVDLLIIACNTASSYAIETLKKILPIPIIGVVKPGAEAAIRYTKNKKVGVIGTVATVKSQ 122
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
N + + + I+ + VE I + + ++ E K D +
Sbjct: 123 SYVNELKNLDNSLEIYQKPCPLFVPLVE----EGWIDNEVARLTVKEYLQELIEKGIDTL 178
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYPL+ + + L P ++ +D+S +I + L +F++ +
Sbjct: 179 ILGCTHYPLLKNTIKSLYP-HLNIVDSSIAIVDHIKNL-----NLTFNGNGVRKVFITDE 232
Query: 256 PDIAMRRLMQGFG 268
G
Sbjct: 233 SHAFDNFKKMLIG 245
>gi|295105836|emb|CBL03379.1| glutamate racemase [Gordonibacter pamelaeae 7-10-1-b]
Length = 313
Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 54/271 (19%), Positives = 99/271 (36%), Gaps = 21/271 (7%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG GGL V +++ +P +Y+ D PYG + + + L
Sbjct: 32 DAPIGVFDSGFGGLTVARELAKALPRESIVYLGDSARCPYGPRTLQEVDGFVQQIGG-WL 90
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA + TFP P + AA T++ + +++T AT+
Sbjct: 91 VDRGVKMVVIACNTATAAGLAHAQRTFPVPVIGVVEPGARAAAHATRNNRVGVVATKATV 150
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED-------------EIKKE 179
+ I + + ++ E+ + + ++
Sbjct: 151 ESNAYTKAIRHLDAGITVFSTATPRFVEIAEQGIRMAEGPLENYTSLASKVYIRPAFEEI 210
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
D +VL CTH+PL+ + + V + +S AR +L R +
Sbjct: 211 AREYLEPLRRAGVDTLVLGCTHFPLLKALIGGVMGREVTLISSSTEAARDVAEILARRSA 270
Query: 240 HQTRVFD-DHALFLSGKP-DIAMRRLMQGFG 268
+ + + F +G + +GFG
Sbjct: 271 YARADHEARYEFFTTGDDLEEF-----RGFG 296
>gi|294142952|ref|YP_003558930.1| glutamate racemase [Shewanella violacea DSS12]
gi|293329421|dbj|BAJ04152.1| glutamate racemase [Shewanella violacea DSS12]
Length = 291
Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 77/277 (27%), Positives = 129/277 (46%), Gaps = 23/277 (8%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L IL+FDSGIGGL +L ++R +P ++IY+ D+ PYG + L + L +D
Sbjct: 14 LSKPILVFDSGIGGLTILDEIRLALPNENYIYLFDNARLPYGELGEQELISGSVSLITDF 73
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + +IACNTA TLI LR+ ++ +G VPAIK AA ++ I +L+TP T
Sbjct: 74 VKNESVSMVIIACNTASTLILPSLRAAL-NIPVVGVVPAIKPAALLSKKKHIGLLATPGT 132
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++RTYT LI + +C + L +S L E+ A G + + + +
Sbjct: 133 IKRTYTHELIEQFAGECKVDLYASSELVLLAEQKAAGHPVTQQQ----LARILSPIYQSE 188
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL-------LPRINTHQTRV 244
D +VL CTH+P++ ++ + LD+ ++A R L L + +
Sbjct: 189 LDTLVLGCTHFPILRQEMQEYLGDKISLLDSGKAVAARVVTLKLKAQQKLVQAEWDKDET 248
Query: 245 FDDHA-----------LFLSGKPDIAMRRLMQGFGLK 270
+ F S + +++ + FG
Sbjct: 249 NEGLEQEGDCSRTELAYFTSQSIEKGLKKTLAKFGFS 285
>gi|158520555|ref|YP_001528425.1| glutamate racemase [Desulfococcus oleovorans Hxd3]
gi|158509381|gb|ABW66348.1| glutamate racemase [Desulfococcus oleovorans Hxd3]
Length = 261
Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 54/251 (21%), Positives = 102/251 (40%), Gaps = 7/251 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V + + + Y +Y D PYG + K + +++L +
Sbjct: 2 IGIFDSGLGGLTVARAVMDELAGYDILYFGDTARTPYGAKSPETVIKYALEN-TELLLSH 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ ++ACNTA ++ + + + F F PA+ AA +++G I ++ T AT+
Sbjct: 61 GAKMVIMACNTASSVATEAVTARFDIPVFEVITPAVALAARLSKTGAIGVIGTRATINSG 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
I +H + +L VE +K+ E ++ + ++ D +
Sbjct: 121 IYEKKILEQRPGARVHSQACPLLVPLVE----EGWLKKPETAMIVKKYLHPLKTRQVDTL 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHALFLS 253
+L CTHYP++ V +D+S ++AR + + + +S
Sbjct: 177 ILGCTHYPILKKTIGHKIGRRVAIIDSSTAVARSVKAFIDGHPPMEASLSKTGTARFLVS 236
Query: 254 GKPDIAMRRLM 264
Sbjct: 237 DITAQFKTTAQ 247
>gi|269795791|ref|YP_003315246.1| glutamate racemase [Sanguibacter keddieii DSM 10542]
gi|269097976|gb|ACZ22412.1| glutamate racemase [Sanguibacter keddieii DSM 10542]
Length = 268
Score = 215 bits (549), Expect = 4e-54, Method: Composition-based stats.
Identities = 50/263 (19%), Positives = 92/263 (34%), Gaps = 12/263 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I IFDSG+GGL V + + +P Y+ D PYG ++ + +
Sbjct: 2 NNAPIGIFDSGVGGLTVARSILDQLPHESIHYIGDTRHSPYGPKPLATVRALALDVMD-S 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRS----TFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
L + VIACN+A + + R +PA ++A A T++G + ++
Sbjct: 61 LVDQGVKMLVIACNSASAAVLRDARERYTVRHGIPVVEVILPAARRAVAATRTGRVGVIG 120
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT+ + + + + + S VE + +
Sbjct: 121 TRATIESRAYEDALAV-AAGISVTGQACPDFVSLVESGVTSG----PAVLEVSRRYLEPV 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD- 246
D ++L CTHYPL+ + V + +++ A+ L + +
Sbjct: 176 IAADVDTLILGCTHYPLLTGAISYVMGESVTLVSSAEETAKDVYRTLVAHDLARDENAGP 235
Query: 247 -DHALFLSGKPDIAMRRLMQGFG 268
H +G + G
Sbjct: 236 ATHRFQSTGDTSSFSVLARRFLG 258
>gi|323525504|ref|YP_004227657.1| glutamate racemase [Burkholderia sp. CCGE1001]
gi|323382506|gb|ADX54597.1| glutamate racemase [Burkholderia sp. CCGE1001]
Length = 295
Score = 215 bits (549), Expect = 4e-54, Method: Composition-based stats.
Identities = 65/262 (24%), Positives = 110/262 (41%), Gaps = 9/262 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ + IFDSG+GGL VL+ +R P+ +YVAD + PYG +D + R + + + L
Sbjct: 20 RAPVGIFDSGLGGLSVLRAVRAQSPDEALLYVADSLYAPYGERDDDFIADRTLAI-GEWL 78
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K V+ACNTA +R P + +G P +K AA ++++ + +L+T TL
Sbjct: 79 VKQGAKALVVACNTATAQSIALVREKLP-IPLVGVEPGVKPAALHSRTRVAGVLATQVTL 137
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R L+ Y + C L VE G E++ +
Sbjct: 138 RSARFQALLARYAADCRFICQPGHGLVQAVERCDVG----SAELRALLASYLQPMLEAGA 193
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT---HQTRVFDDHA 249
D +VL CTHYP + R + + +D S +IAR+ +L + Q
Sbjct: 194 DTLVLGCTHYPFLDAAIRDIVGDRMALVDTSVAIARQLERVLEQHGMRAALQAASAPLPR 253
Query: 250 LFLSGKPDIAMRRLMQGFGLKS 271
+ + + + + +
Sbjct: 254 FYSTDDGTHLRQLVATLLDIDA 275
>gi|323343637|ref|ZP_08083864.1| glutamate racemase [Prevotella oralis ATCC 33269]
gi|323095456|gb|EFZ38030.1| glutamate racemase [Prevotella oralis ATCC 33269]
Length = 280
Score = 215 bits (549), Expect = 4e-54, Method: Composition-based stats.
Identities = 57/275 (20%), Positives = 100/275 (36%), Gaps = 17/275 (6%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
MK+ P I +FDSG GGL +L +R L+P Y ++Y+ D+ PYG+ +
Sbjct: 1 MKLSQVP------GPIGVFDSGYGGLTILHGIRQLLPRYDYMYLGDNARAPYGSRSFDVV 54
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL-RSTFPSMAFLG-----AVPAIKQA 114
+ + L + L ++ CNTA + R P P +
Sbjct: 55 YEFTRQAVAK-LFEMGCHLVILGCNTASAKALRTIQRQDLPVWDAERRVLGVIRPTAEVI 113
Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174
T+S + +L+T T+R I + V + +E +
Sbjct: 114 GTLTKSRHVGLLATEGTVRSESYKLEIRKLYPDIKVTGVPCPLWVPIIENNEADSPGADY 173
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
++K I + D I+L CTHYPL++ + V + + +A+ + L
Sbjct: 174 FVQKSIHQLMT--LDPQIDTIILGCTHYPLLMPKISKYVGKGVRVVPQGEYVAKSLKDYL 231
Query: 235 PRINTHQTR--VFDDHALFLSGKPDIAMRRLMQGF 267
R T + + F + P+
Sbjct: 232 HRHETIEKKCTKEGTCRYFTTENPEKFKESAQIFL 266
>gi|148825723|ref|YP_001290476.1| glutamate racemase [Haemophilus influenzae PittEE]
gi|229846914|ref|ZP_04467020.1| glutamate racemase [Haemophilus influenzae 7P49H1]
gi|166231037|sp|A5UBE2|MURI_HAEIE RecName: Full=Glutamate racemase
gi|148715883|gb|ABQ98093.1| glutamate racemase [Haemophilus influenzae PittEE]
gi|229809998|gb|EEP45718.1| glutamate racemase [Haemophilus influenzae 7P49H1]
Length = 269
Score = 215 bits (549), Expect = 4e-54, Method: Composition-based stats.
Identities = 76/265 (28%), Positives = 128/265 (48%), Gaps = 6/265 (2%)
Query: 9 EKKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
KK + +L FDSG+GG V ++ + L+P + ++Y D+ GFPY E+ ++ R +
Sbjct: 2 NKKEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSEREEESIIHRTLAA 61
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+
Sbjct: 62 CQLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLA 120
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++R Y LI + C + + + L E+ G + +K E+
Sbjct: 121 TKGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPWAGM- 179
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
D +VL CTH+PLI + P ++D S +IA+R + LL N +
Sbjct: 180 --ADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQVQNEKYN 237
Query: 248 HALFLSGKPDI-AMRRLMQGFGLKS 271
+ P+ ++ + +G +S
Sbjct: 238 QMFCTAHFPEESQFKKALHLWGFES 262
>gi|145639716|ref|ZP_01795319.1| glutamate racemase [Haemophilus influenzae PittII]
gi|145271273|gb|EDK11187.1| glutamate racemase [Haemophilus influenzae PittII]
gi|309750685|gb|ADO80669.1| Glutamate racemase [Haemophilus influenzae R2866]
Length = 269
Score = 215 bits (549), Expect = 4e-54, Method: Composition-based stats.
Identities = 75/265 (28%), Positives = 129/265 (48%), Gaps = 6/265 (2%)
Query: 9 EKKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
KK + +L FDSG+GG V ++ + L+P + ++Y D+ GFPY ++ ++ R +
Sbjct: 2 NKKEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSERKEESIIHRTLAA 61
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+
Sbjct: 62 CQLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLA 120
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++R Y LI + C + + + L E+ G + +K E+
Sbjct: 121 TKGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPWA--- 177
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+ D +VL CTH+PLI + P ++D S +IA+R + LL N +
Sbjct: 178 DMADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQVQNEKYN 237
Query: 248 HALFLSGKPDI-AMRRLMQGFGLKS 271
+ P+ ++ + +G +S
Sbjct: 238 QMFCTAHFPEESQFKKALHLWGFES 262
>gi|328955986|ref|YP_004373319.1| glutamate racemase [Coriobacterium glomerans PW2]
gi|328456310|gb|AEB07504.1| glutamate racemase [Coriobacterium glomerans PW2]
Length = 309
Score = 215 bits (549), Expect = 4e-54, Method: Composition-based stats.
Identities = 55/270 (20%), Positives = 95/270 (35%), Gaps = 15/270 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GG V + + MP +Y+ D PYG ++ + L
Sbjct: 13 DRPIGVFDSGVGGFTVARAISRAMPHESIVYIGDTARCPYGTRGVEEVRAFVAQ-VGTWL 71
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + + VIACNTA + F P + A T++ I +L+T T+
Sbjct: 72 VRQRVKVIVIACNTATASALGLAQRMFDVPVIGVIGPGARAAVLATRTREIGVLATDLTI 131
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK------------IKEDEIKKEI 180
I + + +H ++ VE G E++ +
Sbjct: 132 ASGAYLRAIKNLDAGVGVHGCATQRFVELVESRLAGGIGADAQWLDGADLFDTPEVRALV 191
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
G D +VL CTH+PL+V R + V + +++ R +L
Sbjct: 192 RRETEPLRGLDIDAVVLGCTHFPLLVRPIRAVLGRGVHVVSSAEETMRELHEMLACQGHL 251
Query: 241 QTRV-FDDHALFLSGKPDIAMRRLMQG-FG 268
+H + + A + FG
Sbjct: 252 APSTARPEHRFATTSENTSAFAEAGRFIFG 281
>gi|254251913|ref|ZP_04945231.1| Glutamate racemase [Burkholderia dolosa AUO158]
gi|124894522|gb|EAY68402.1| Glutamate racemase [Burkholderia dolosa AUO158]
Length = 285
Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats.
Identities = 68/259 (26%), Positives = 109/259 (42%), Gaps = 8/259 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL VL+ +R +P FIYVAD PYG +D + +R + + + L
Sbjct: 15 PIGIFDSGLGGLSVLRAVRAHLPGESFIYVADARYVPYGERDDAFITERTIAI-GEWLVG 73
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ VIACNTA R ++ +G P IK A + SG+ +L+T +TLR
Sbjct: 74 QRAKALVIACNTATAQSIAAARERL-AIPVVGVEPGIKPAVQQSASGVAGVLATQSTLRS 132
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
L+ + + C L +E G ++ + + D
Sbjct: 133 ARFQALLERHGAGCRFICQPGHGLVQAIERGDTG----SPALRALLADYLHRMLDEGADT 188
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV--FDDHALFL 252
+VL CTHYP ++ R + + +D SD+IAR+ +L + +
Sbjct: 189 VVLGCTHYPFLIATIRDIVGDRLSIVDTSDAIARQLVRVLDQHDLRAPDDTRAAPPRFCS 248
Query: 253 SGKPDIAMRRLMQGFGLKS 271
+G+ L +
Sbjct: 249 TGEGRQLQALASTLLALDA 267
>gi|260580700|ref|ZP_05848527.1| glutamate racemase [Haemophilus influenzae RdAW]
gi|260092762|gb|EEW76698.1| glutamate racemase [Haemophilus influenzae RdAW]
Length = 269
Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats.
Identities = 75/263 (28%), Positives = 130/263 (49%), Gaps = 5/263 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K+ + ++L FDSG+GG V ++ + L+P +H++Y D+ GFPY ++ ++ R +
Sbjct: 4 KEKRPTVLFFDSGVGGFSVYREAKKLLPNWHYLYCFDNAGFPYSERKEESIIHRTLAACQ 63
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T
Sbjct: 64 LINQRYPLDAMVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLATK 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++R Y LI + C + + + L E+ G + +K E+
Sbjct: 123 GTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSSWAGM--- 179
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D +VL CTH+PLI + P ++D S +IA+R + LL N +
Sbjct: 180 ADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQAQNEKYNQM 239
Query: 250 LFLSGKPDI-AMRRLMQGFGLKS 271
+ P+ ++ + +G +S
Sbjct: 240 FCTAHFPEESQFKKALHLWGFES 262
>gi|308270889|emb|CBX27499.1| Glutamate racemase [uncultured Desulfobacterium sp.]
Length = 266
Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats.
Identities = 62/254 (24%), Positives = 108/254 (42%), Gaps = 7/254 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGGL V++ + +P Y IY D PYG+ + + + ++ L
Sbjct: 7 IGIFDSGIGGLTVVKAVMGKIPGYDIIYFGDTARTPYGSKSSETVIQYAIED-TEFLLNN 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA ++ D + F F PA++ A ++ I ++ T AT++
Sbjct: 66 GANIIVVACNTASSVATDSIVKKFDVPVFEVITPAVELAVESSRKMSIGVIGTRATVKSC 125
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
N I + + I+ V+ +L VE I E ++ + K+ D +
Sbjct: 126 VYENKIKAINAGAKIYSVACPLLVPLVE----EGWINRPETSMIVKKYLHSLKVKQIDTL 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFDDHALFLS 253
+L CTHYPL+ H+ + V+ +D+S +A + L +R + +S
Sbjct: 182 ILGCTHYPLLKHIICRKIGKRVNIIDSSLGVADKLEKFLQEHPDIGSRLGKNGKSRIIVS 241
Query: 254 GKPDIAMRRLMQGF 267
+
Sbjct: 242 DITAQFEKTAKATL 255
>gi|94311212|ref|YP_584422.1| glutamate racemase [Cupriavidus metallidurans CH34]
gi|93355064|gb|ABF09153.1| glutamate racemase [Cupriavidus metallidurans CH34]
Length = 270
Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats.
Identities = 60/258 (23%), Positives = 106/258 (41%), Gaps = 8/258 (3%)
Query: 12 LQN-SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ + IFDSG+GGL VL+++R L+P +Y AD PYG + ++ R + +
Sbjct: 1 MNPSPVGIFDSGLGGLSVLREVRALLPHESLLYFADSRYAPYGEKPERFVEARTLQVCE- 59
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L VIACNTA LR ++ +G P +K AAA ++S ++ +L+T
Sbjct: 60 WLVAQGCKALVIACNTATMHAVQTLRERL-AVPIIGVEPGLKPAAAASRSKVVGVLATAN 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TL+ + L+ S ++ + + L +E+ + D +++ +
Sbjct: 119 TLKSAKFNRLLTSLGNESRFLCEAGVGLVPLIEQ----GDVSSDTVRQTLGTLLSPMLEA 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHA 249
D +VL CTHYP + L + +D +IAR+ L + +
Sbjct: 175 GADTLVLGCTHYPFLSETIDDLVDGRLALIDTGVAIARQLARKLAEFDLAASPDTAPSVR 234
Query: 250 LFLSGKPDIAMRRLMQGF 267
+
Sbjct: 235 YLSTKDAAHLREMAAALL 252
>gi|167764308|ref|ZP_02436435.1| hypothetical protein BACSTE_02693 [Bacteroides stercoris ATCC
43183]
gi|167698424|gb|EDS15003.1| hypothetical protein BACSTE_02693 [Bacteroides stercoris ATCC
43183]
Length = 279
Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats.
Identities = 58/261 (22%), Positives = 105/261 (40%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L K+R +PEY +IY+ D+ PYG + + + + L +
Sbjct: 11 PIGVFDSGYGGLTILSKIREALPEYDYIYLGDNARAPYGTRSFEVVYEFTLQAVTK-LFE 69
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ACNTA + ++L P+ LG + P ++ T+S + +L+T
Sbjct: 70 MGCHLVILACNTASAKALRSIQINDLPHLDPARRVLGVIRPTVECIGNITRSRHVGVLAT 129
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ IH + + + S VE + ++K I +
Sbjct: 130 GGTIKSESYPLEIHKLFPDIKVSGEACPLWVSLVENNEAQGDGTDYFVRKYINELLA--K 187
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFD 246
+ D +L CTHYP+++ R+ P + + +A + L R Q
Sbjct: 188 DREIDTAILGCTHYPILLPKIRKYMPESITIVSQGKLVADSLKDYLHRHPEIDAQCTQNG 247
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ + + D
Sbjct: 248 KCSYYTTEAEDKFTESASIFL 268
>gi|282877118|ref|ZP_06285960.1| glutamate racemase [Prevotella buccalis ATCC 35310]
gi|281300800|gb|EFA93127.1| glutamate racemase [Prevotella buccalis ATCC 35310]
Length = 279
Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats.
Identities = 53/261 (20%), Positives = 97/261 (37%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L +R L+PEY ++Y+ D+ PYG + + L +
Sbjct: 10 PIGVFDSGYGGLTILHGIRQLLPEYDYVYLGDNARAPYGTRSFDVVYEFTRQAVVK-LFE 68
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF-PSMAFLG-----AVPAIKQAAAYTQSGLISILST 128
L ++ CNTA ++ PS+ P + + T+S + +L+T
Sbjct: 69 MGCHLVILGCNTASAKALRTIQQHDLPSLDSNRRVLGVIRPTAEVIGSLTKSRHVGLLAT 128
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ I + + ++ VE + +KK ++ +
Sbjct: 129 EGTVKSESYQLEIQKFFPDIQVSGIACPFWVPLVEYNEADSPGADYFVKKRLDALAQ--K 186
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFD 246
D I+L CTHYPL++ + V + + +A + L R +
Sbjct: 187 DPLIDTIILGCTHYPLLMPKIEKYKRPGVRIVAQGEYVANSLKDYLKRHPEMNEKCTKTG 246
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
F + P +
Sbjct: 247 SCQYFTTENPIRFQEQAQVFL 267
>gi|326693298|ref|ZP_08230303.1| glutamate racemase [Leuconostoc argentinum KCTC 3773]
Length = 281
Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats.
Identities = 54/260 (20%), Positives = 88/260 (33%), Gaps = 6/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
N I DSG+GGL V++ + +P FI++ D PYG + +
Sbjct: 1 MSKNNPIGFVDSGVGGLTVVKAAQDQLPHEQFIFIGDTARMPYGPRPVQEVIDYTFQMAQ 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+L L VIACNTA +L++ P VP AAA T + I +++T
Sbjct: 61 FLLTVKHIKLLVIACNTATARALPQLQAQLPIPVIGVIVPGATAAAATTGNQKIGVIATQ 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ + I + + I + E +D +
Sbjct: 121 GTVTSGAYQDEIQAVNADVTIFQQAEPDFVQLAEANLAQAATTKDIV----AQHLASLTA 176
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFDD 247
+ D +VL CTH+PL+ V +D + L + H D
Sbjct: 177 QGIDTLVLGCTHFPLLAEAITAAVGPNVKLVDPGRKTVQVIIDTLDQQALHTAVPHRHAD 236
Query: 248 HALFLSGKPDIAMRRLMQGF 267
+ + +P
Sbjct: 237 DIFYTTKEPATFKAIATDWL 256
>gi|53711792|ref|YP_097784.1| glutamate racemase [Bacteroides fragilis YCH46]
gi|52214657|dbj|BAD47250.1| glutamate racemase [Bacteroides fragilis YCH46]
Length = 280
Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats.
Identities = 58/261 (22%), Positives = 109/261 (41%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L K+R +PEY +IY+ D+ PYG + + + + L +
Sbjct: 11 PIGVFDSGYGGLTILSKIREALPEYDYIYLGDNARTPYGTRSFEIVYEFTLQAVNK-LFE 69
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ACNTA + ++L + P LG + P + + TQ+ + IL+T
Sbjct: 70 MGCHLVILACNTASAKALRTIQINDLPNIDPDRRVLGVIRPTAECIGSMTQTRHVGILAT 129
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ +H + + + VE + + I+K I+ +
Sbjct: 130 AGTIKSESYPLEVHKLFEDIKVSGEACPMWVPLVENNEANSEGADFFIRKYIDNLLA--K 187
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT--HQTRVFD 246
++ D +VL CTHYP+++ ++ P V + + +A + L R +
Sbjct: 188 DRQIDTLVLGCTHYPILLPKIQKFIPQGVKVVAQGEYVATSLKDYLHRHPEMDMKCTREG 247
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ + D +
Sbjct: 248 KCRFYTTEAEDKFIESASMFL 268
>gi|191172716|ref|ZP_03034254.1| glutamate racemase [Escherichia coli F11]
gi|300986811|ref|ZP_07177801.1| hypothetical protein HMPREF9553_03017 [Escherichia coli MS 200-1]
gi|190907020|gb|EDV66621.1| glutamate racemase [Escherichia coli F11]
gi|300306388|gb|EFJ60908.1| hypothetical protein HMPREF9553_03017 [Escherichia coli MS 200-1]
gi|315289655|gb|EFU49048.1| hypothetical protein HMPREF9539_00329 [Escherichia coli MS 110-3]
gi|324012464|gb|EGB81683.1| hypothetical protein HMPREF9533_03508 [Escherichia coli MS 60-1]
Length = 262
Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats.
Identities = 82/256 (32%), Positives = 139/256 (54%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFIVERVVEIVTAVQERYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y
Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S + E G + D +K+ + KE D +V
Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238
Query: 257 D-IAMRRLMQGFGLKS 271
+ + ++Q +G ++
Sbjct: 239 EAEQLLPVLQRYGFET 254
>gi|153808969|ref|ZP_01961637.1| hypothetical protein BACCAC_03270 [Bacteroides caccae ATCC 43185]
gi|149128302|gb|EDM19521.1| hypothetical protein BACCAC_03270 [Bacteroides caccae ATCC 43185]
Length = 280
Score = 215 bits (547), Expect = 6e-54, Method: Composition-based stats.
Identities = 61/261 (23%), Positives = 109/261 (41%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + + L +
Sbjct: 11 PIGVFDSGYGGLTILNKIREILPEYDYIYLGDNARTPYGTRSFEIVYEFTLQAVNK-LFE 69
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ACNTA + + L P LG + P ++ TQS I IL+T
Sbjct: 70 LGCHLVILACNTASAKALRSIQMNNLPKIDPERRVLGVIRPTVECIGNITQSRHIGILAT 129
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ +H ++ V+ + VE + + I+K I +
Sbjct: 130 AGTIKSESYPLEVHKLYPDIQVNGVACPMWVPLVENNEAQNEGADYFIRKYINQLLQ--K 187
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFD 246
+ D ++L CTHYPL++ +Q P + + + +A + L R + +
Sbjct: 188 DSQIDTVILGCTHYPLLLPKIQQYIPDNIRVIAQGEYVAESLKDYLCRHPEMDIKCTKNN 247
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ + D +
Sbjct: 248 SCLFYTTEAEDKFIESASTFL 268
>gi|227885282|ref|ZP_04003087.1| glutamate racemase [Escherichia coli 83972]
gi|300975977|ref|ZP_07173249.1| hypothetical protein HMPREF9531_01194 [Escherichia coli MS 45-1]
gi|301048608|ref|ZP_07195621.1| hypothetical protein HMPREF9549_02631 [Escherichia coli MS 185-1]
gi|227837734|gb|EEJ48200.1| glutamate racemase [Escherichia coli 83972]
gi|300299528|gb|EFJ55913.1| hypothetical protein HMPREF9549_02631 [Escherichia coli MS 185-1]
gi|300410167|gb|EFJ93705.1| hypothetical protein HMPREF9531_01194 [Escherichia coli MS 45-1]
gi|307556119|gb|ADN48894.1| glutamate racemase [Escherichia coli ABU 83972]
gi|312948550|gb|ADR29377.1| glutamate racemase [Escherichia coli O83:H1 str. NRG 857C]
gi|315292669|gb|EFU52021.1| hypothetical protein HMPREF9544_02904 [Escherichia coli MS 153-1]
gi|320196758|gb|EFW71380.1| Glutamate racemase [Escherichia coli WV_060327]
gi|323190167|gb|EFZ75445.1| glutamate racemase [Escherichia coli RN587/1]
gi|324006695|gb|EGB75914.1| hypothetical protein HMPREF9532_03634 [Escherichia coli MS 57-2]
gi|330908292|gb|EGH36811.1| glutamate racemase [Escherichia coli AA86]
Length = 262
Score = 215 bits (547), Expect = 6e-54, Method: Composition-based stats.
Identities = 82/256 (32%), Positives = 139/256 (54%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFIVERVVEIVTAVQERYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y
Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S + E G + D +K+ + KE D +V
Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238
Query: 257 D-IAMRRLMQGFGLKS 271
+ + ++Q +G ++
Sbjct: 239 EAEQLLPVLQRYGFET 254
>gi|194334596|ref|YP_002016456.1| glutamate racemase [Prosthecochloris aestuarii DSM 271]
gi|229486246|sp|B4S417|MURI_PROA2 RecName: Full=Glutamate racemase
gi|194312414|gb|ACF46809.1| glutamate racemase [Prosthecochloris aestuarii DSM 271]
Length = 269
Score = 215 bits (547), Expect = 6e-54, Method: Composition-based stats.
Identities = 67/257 (26%), Positives = 111/257 (43%), Gaps = 7/257 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ + IFDSGIGGL V++ M+ ++P IY D PYG+ ++K + L
Sbjct: 5 ESPVGIFDSGIGGLTVVRAMQAMLPAEQIIYFGDTARVPYGSKSQVTIRKYAHED-TLTL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
KYQP + +IACNT L D + ST + LG + A + A T +G I ++ T AT
Sbjct: 64 MKYQPKMIIIACNTVSALGLDVVESTGKGVTVLGVLKAGAELAVRETLNGRIGVIGTQAT 123
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + I + + + + + E I K E E
Sbjct: 124 ICSNAYACEITALAPEIQVFSKACPLFVPLAE----EGFINHPASKLIAEEYLDELLCCN 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-AL 250
D +VL CTHYP++ + ++++ + +D+++++A AR LL T L
Sbjct: 180 IDTLVLGCTHYPILKTMIQEITGPDIRIIDSAEAVAAGARTLLADNALLNTATTTRTPHL 239
Query: 251 FLSGKPDIAMRRLMQGF 267
+S P
Sbjct: 240 LVSDLPQKFQSLYTLFL 256
>gi|46199582|ref|YP_005249.1| glutamate racemase [Thermus thermophilus HB27]
gi|81567628|sp|Q72I52|MURI_THET2 RecName: Full=Glutamate racemase
gi|46197208|gb|AAS81622.1| glutamate racemase [Thermus thermophilus HB27]
Length = 257
Score = 215 bits (547), Expect = 6e-54, Method: Composition-based stats.
Identities = 59/260 (22%), Positives = 99/260 (38%), Gaps = 17/260 (6%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K + I +FDSG+GGL VL+ +R L+P F+Y D PYG +++ +
Sbjct: 1 MKDPKAPIGVFDSGVGGLTVLKALRRLLPREEFLYFGDTARVPYGGKPLAMVRRFAWEIA 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
L + V+ACNTA + +L F PA + A + + + ++ T
Sbjct: 61 G-FLLRQGVKAIVVACNTASSAALPDLAEDLSVPVFGVVEPAARAARGFRK---VGLIGT 116
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ + + + VEE + + +E
Sbjct: 117 QATVESGAYPRYVDLA------WAKACPLFVPLVEEGLWDDPVALLVARHYLEDA----- 165
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
K + ++L CTHYP + + P V LD+++ AR L
Sbjct: 166 PKDLEALILGCTHYPFLKGAIGAVLP-GVALLDSAELTAREVARALEAEGLLNPEGRGRT 224
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
++G P+ A R L + G
Sbjct: 225 LHLVTGDPE-AYRALAERLG 243
>gi|312965372|ref|ZP_07779605.1| glutamate racemase [Escherichia coli 2362-75]
gi|312290046|gb|EFR17933.1| glutamate racemase [Escherichia coli 2362-75]
Length = 262
Score = 215 bits (547), Expect = 6e-54, Method: Composition-based stats.
Identities = 82/256 (32%), Positives = 137/256 (53%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQKRYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y
Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + + C I ++ S + E G + D +K+ + KE D +V
Sbjct: 121 THELIARFANACQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238
Query: 257 D-IAMRRLMQGFGLKS 271
+ + ++Q +G ++
Sbjct: 239 EAEQLLPVLQRYGFET 254
>gi|110835225|ref|YP_694084.1| glutamate racemase [Alcanivorax borkumensis SK2]
gi|110648336|emb|CAL17812.1| glutamate racemase [Alcanivorax borkumensis SK2]
Length = 263
Score = 215 bits (547), Expect = 6e-54, Method: Composition-based stats.
Identities = 67/254 (26%), Positives = 121/254 (47%), Gaps = 7/254 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSGIGGL + +++R L+P + +YVAD V PYG +H +++R + L
Sbjct: 6 PIGVFDSGIGGLSIARRIRELLPHENLLYVADSVHAPYGEKAEHYIQQRA-DTITRFLID 64
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA +LR+ + ++ +G P IK AA ++SG+I +L+T TL+
Sbjct: 65 NNAKAIVVACNTATVSAIRQLRADY-TLPIIGVEPGIKPAALKSKSGVIGVLATSQTLKS 123
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+NL + + + L ++E + ++ + + K D
Sbjct: 124 ESFNNLSRLFSESVCVEIQPCPGLVEQIEVL----DLDSEKTQALVARYVAPLIEKGADH 179
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALFLS 253
IVL CTHY + V R+++ + ++ ++AR L N T A + S
Sbjct: 180 IVLGCTHYAFLAPVIRRIAGAGIQVVNTDIAVARETLRRLQNANRLSTSVAPGQMAFWSS 239
Query: 254 GKPDIAMRRLMQGF 267
++A +++ + +
Sbjct: 240 AANELADQQIKRLW 253
>gi|171322906|ref|ZP_02911602.1| glutamate racemase [Burkholderia ambifaria MEX-5]
gi|171091727|gb|EDT37266.1| glutamate racemase [Burkholderia ambifaria MEX-5]
Length = 287
Score = 215 bits (547), Expect = 6e-54, Method: Composition-based stats.
Identities = 69/275 (25%), Positives = 110/275 (40%), Gaps = 10/275 (3%)
Query: 1 MKIDNYPCEKKLQN--SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58
M + + P ++ + IFDSG+GGL VL+ +R +P F+YVAD PYG ++
Sbjct: 1 MTMTHQPAASGVRPAAPVGIFDSGLGGLSVLRAVRAHLPGESFVYVADSHHAPYGPRDEA 60
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ +R + + + L + VIACNTA +R S+ +G P IK AAA +
Sbjct: 61 FITERTLAI-GEWLAREGAKALVIACNTATARAIAAIRERL-SIPLVGVEPGIKPAAALS 118
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
+G+ +L+T +TL L+ Y + L +E ++
Sbjct: 119 TTGVAGVLATQSTLNSPRFQALLDRYGAGRRFICQPGHGLVEAIERGDTN----SPALRA 174
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+E D +VL CTHYP R L + +D SD+IAR+ +L
Sbjct: 175 LLERYLQPMLDDGADTLVLGCTHYPFFTETIRDLVGDRLTIVDTSDAIARQLARVLDERG 234
Query: 239 THQTRV--FDDHALFLSGKPDIAMRRLMQGFGLKS 271
+ GL +
Sbjct: 235 QRAPAGTRAAPPRFCSTSDGLQLRALASTLLGLDA 269
>gi|224536359|ref|ZP_03676898.1| hypothetical protein BACCELL_01233 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522019|gb|EEF91124.1| hypothetical protein BACCELL_01233 [Bacteroides cellulosilyticus
DSM 14838]
Length = 279
Score = 215 bits (547), Expect = 7e-54, Method: Composition-based stats.
Identities = 55/261 (21%), Positives = 106/261 (40%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L K+R +P+Y +IY+ D+ PYG + + + + L +
Sbjct: 11 PIGVFDSGYGGLTILSKIREALPQYDYIYLGDNARSPYGTRSFEIVYEFTLQAVTR-LFE 69
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ACNTA + ++L P+ LG + P ++ T S + IL+T
Sbjct: 70 MGCHLVILACNTASAKALRSIQMNDLPEMDPARRVLGVIRPTVECIGNITHSRHVGILAT 129
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ IH + + + S VE + ++K I +
Sbjct: 130 AGTIKSESYPLEIHKLFPDIQVEGEACPLWVSLVENNEAEGDGTDYFVRKYINELLS--K 187
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFD 246
++ D ++L CTHYP+++ + P + + + +A + L R +
Sbjct: 188 DEQIDTVILGCTHYPILLPKIEKYMPKGITTVAQGELVATSLKDYLQRHPEMDAKCTKGG 247
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ + + +
Sbjct: 248 NCTYYTTEAEEKFTESASTFL 268
>gi|326316343|ref|YP_004234015.1| glutamate racemase [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323373179|gb|ADX45448.1| Glutamate racemase [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 288
Score = 215 bits (547), Expect = 7e-54, Method: Composition-based stats.
Identities = 69/270 (25%), Positives = 109/270 (40%), Gaps = 11/270 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL VL+ +R +P F+Y+AD PYG D + R + + +
Sbjct: 6 QRPIGVFDSGVGGLSVLRALRAELPHERFVYLADSGHAPYGERGDAYVAARTHAITTYLQ 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA E+R+ + +G PA+K A A T++G + ++ T TL
Sbjct: 66 QTHGIKALVVACNTATAAAIHEVRARHAGLPLVGVEPALKPALALTRTGRVGVIGTRGTL 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED---EIKKEIEGCFIEKEG 189
L S + LA +E + EI+
Sbjct: 126 ASAKFQRLQASLQGAVEFVVQPCDGLAHAIERSTADTQPDAPATAEIRALCARYTAALGP 185
Query: 190 KRT-----DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-- 242
T D +VL CTHY + R + V ++ + +AR+ R LL T T
Sbjct: 186 FGTAPGEIDTLVLGCTHYIFAENALRAHTGPHVRLVETGEPVARQTRRLLEAAGTLATAH 245
Query: 243 -RVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
+LF +G + + L +
Sbjct: 246 GPAAGTASLFTTGALPLLQAAAHRWLQLPA 275
>gi|68250338|ref|YP_249450.1| glutamate racemase [Haemophilus influenzae 86-028NP]
gi|81335242|sp|Q4QJK7|MURI_HAEI8 RecName: Full=Glutamate racemase
gi|68058537|gb|AAX88790.1| glutamate racemase [Haemophilus influenzae 86-028NP]
Length = 269
Score = 215 bits (547), Expect = 7e-54, Method: Composition-based stats.
Identities = 76/263 (28%), Positives = 130/263 (49%), Gaps = 5/263 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K+ + ++L FDSG+GG V ++ + L+P +H++Y D+ GFPY E+ ++ R +
Sbjct: 4 KEKRPTVLFFDSGVGGFSVYREAKKLLPNWHYLYCFDNAGFPYSEREEESIIHRTLAACQ 63
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T
Sbjct: 64 LINQRYPLDAIVIACNTASTVVLPPLRAAF-EIPIIGTVPAIKPASEITKTKHIGLLATK 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++R Y LI + C + + + L E+ G + +K E+
Sbjct: 123 GTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSSWAGM--- 179
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D +VL CTH+PLI + P ++D S +IA+R + LL N +
Sbjct: 180 ADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQVQNEKYNQM 239
Query: 250 LFLSGKPDI-AMRRLMQGFGLKS 271
+ P+ ++ + +G +S
Sbjct: 240 FCTAHFPEESQFKKALHLWGFES 262
>gi|56964421|ref|YP_176152.1| glutamate racemase [Bacillus clausii KSM-K16]
gi|81600804|sp|Q5WEL9|MURI_BACSK RecName: Full=Glutamate racemase
gi|56910664|dbj|BAD65191.1| glutamate racemase [Bacillus clausii KSM-K16]
Length = 276
Score = 214 bits (546), Expect = 8e-54, Method: Composition-based stats.
Identities = 47/247 (19%), Positives = 97/247 (39%), Gaps = 7/247 (2%)
Query: 26 LIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACN 85
L V ++ +P+ +Y+ D PYG ++ + +L + + VIACN
Sbjct: 15 LTVASEIMRQLPKEPIVYIGDSARCPYGPRPVEEVRAFTWQMIGRLLHE-DVKMIVIACN 73
Query: 86 TAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYV 145
TA ++ +E R+ P A +++ ++++ T T+ + +HS
Sbjct: 74 TATAVVLEEARAQLDIPVVGVIRPGAISAIQVSENRHVAVIGTIGTIASNAYTMALHSID 133
Query: 146 SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLI 205
+ ++ + VE+ IK E + + +G D ++L CTHYPL+
Sbjct: 134 ENVTVESLACPLFVPLVEQ----GTIKGPEAEAVVRESLAPLQGAGFDTLILGCTHYPLL 189
Query: 206 VHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALFLSGKPDIAMRRLM 264
V P V + + + AR LL + ++ H + +G+ + +
Sbjct: 190 KPVIEACLP-SVTVISSGEETAREVSSLLFYHSMNEQHQAKATHRFYTTGEANQFKQLAA 248
Query: 265 QGFGLKS 271
+ +
Sbjct: 249 SWLNIHT 255
>gi|288926935|ref|ZP_06420833.1| glutamate racemase [Prevotella buccae D17]
gi|288336294|gb|EFC74677.1| glutamate racemase [Prevotella buccae D17]
Length = 280
Score = 214 bits (546), Expect = 8e-54, Method: Composition-based stats.
Identities = 56/261 (21%), Positives = 98/261 (37%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG GGL +L +R L+PEY ++Y+ D+ PYG + + L +
Sbjct: 11 PIGIFDSGYGGLTILHGIRQLLPEYDYVYLGDNARAPYGTRSFDVVYQFTRQAVIK-LFE 69
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ CNTA + ++ P LG + P + T++ + + +T
Sbjct: 70 MGCHLVILGCNTASAKALRSIQHRDIPELDPDRRVLGVIRPTAEVIGELTRNNHVGLFAT 129
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+R + I + V+ VE + +KK ++ ++
Sbjct: 130 EGTVRSCSYNLEIGKLWPDIKVTGVACPFWVPLVEYNEADSPGADYFVKKRVDELM--RK 187
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFD 246
D I+L CTHYPL++ + P V + + +A + R +
Sbjct: 188 DPEIDTIILGCTHYPLLMPKILKYVPPGVRIIPQGEYVADSLKAYFERHPAMERMCTRGG 247
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
F + PD
Sbjct: 248 TCEYFTTENPDRFKDSARMFL 268
>gi|326800551|ref|YP_004318370.1| glutamate racemase [Sphingobacterium sp. 21]
gi|326551315|gb|ADZ79700.1| Glutamate racemase [Sphingobacterium sp. 21]
Length = 276
Score = 214 bits (546), Expect = 8e-54, Method: Composition-based stats.
Identities = 57/263 (21%), Positives = 98/263 (37%), Gaps = 11/263 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG GGL V +++ +P+Y +IY D+ PYG + M + L
Sbjct: 3 PIGIFDSGYGGLTVFKEISHTLPQYDYIYFGDNARVPYGTRSYDTVYHYTMECVN-HLFD 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFL------GAVPAIKQAAAYTQSGLISILST 128
L ++ACNTA ++ P + +T S + IL+T
Sbjct: 62 LGCHLVILACNTASAKALRTIQQKDLPKRTDLRNVLGVIRPTTEIIDRFTISNHVGILAT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+ IH + Q ++ + + VE +K+ I+ +
Sbjct: 122 SGTVNSASYVLEIHKFFPQIKVYQEACPMWVPLVENNEMDSPGARYFVKQHIDRLLQQ-- 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFD 246
D ++LACTHYPL++ ++ P V + +A+ L R +
Sbjct: 180 STEIDAVILACTHYPLLLPTIKEFMPKGVQVISQGSIVAKSLADYLYRHKEIEALCTKNG 239
Query: 247 DHALFLSGKPDIAMRRLMQGFGL 269
F + + + +GL
Sbjct: 240 ARQFFTTESVENFKEKASIFYGL 262
>gi|170022021|ref|YP_001726975.1| glutamate racemase [Escherichia coli ATCC 8739]
gi|194438347|ref|ZP_03070438.1| glutamate racemase [Escherichia coli 101-1]
gi|297521937|ref|ZP_06940323.1| glutamate racemase [Escherichia coli OP50]
gi|300916976|ref|ZP_07133674.1| hypothetical protein HMPREF9540_00832 [Escherichia coli MS 115-1]
gi|300928750|ref|ZP_07144266.1| hypothetical protein HMPREF9550_01102 [Escherichia coli MS 187-1]
gi|300948244|ref|ZP_07162363.1| hypothetical protein HMPREF9541_01786 [Escherichia coli MS 116-1]
gi|300954723|ref|ZP_07167157.1| hypothetical protein HMPREF9547_00648 [Escherichia coli MS 175-1]
gi|301024176|ref|ZP_07187885.1| hypothetical protein HMPREF9551_02242 [Escherichia coli MS 196-1]
gi|301645164|ref|ZP_07245121.1| hypothetical protein HMPREF9543_01787 [Escherichia coli MS 146-1]
gi|312971739|ref|ZP_07785913.1| glutamate racemase [Escherichia coli 1827-70]
gi|169756949|gb|ACA79648.1| glutamate racemase [Escherichia coli ATCC 8739]
gi|194422784|gb|EDX38780.1| glutamate racemase [Escherichia coli 101-1]
gi|299880535|gb|EFI88746.1| hypothetical protein HMPREF9551_02242 [Escherichia coli MS 196-1]
gi|300318304|gb|EFJ68088.1| hypothetical protein HMPREF9547_00648 [Escherichia coli MS 175-1]
gi|300415728|gb|EFJ99038.1| hypothetical protein HMPREF9540_00832 [Escherichia coli MS 115-1]
gi|300452222|gb|EFK15842.1| hypothetical protein HMPREF9541_01786 [Escherichia coli MS 116-1]
gi|300463275|gb|EFK26768.1| hypothetical protein HMPREF9550_01102 [Escherichia coli MS 187-1]
gi|301076543|gb|EFK91349.1| hypothetical protein HMPREF9543_01787 [Escherichia coli MS 146-1]
gi|310334116|gb|EFQ00321.1| glutamate racemase [Escherichia coli 1827-70]
gi|315617764|gb|EFU98369.1| glutamate racemase [Escherichia coli 3431]
Length = 262
Score = 214 bits (546), Expect = 8e-54, Method: Composition-based stats.
Identities = 82/256 (32%), Positives = 138/256 (53%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y
Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S + E G + D +K+ + KE D +V
Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238
Query: 257 -DIAMRRLMQGFGLKS 271
+ ++Q +G ++
Sbjct: 239 GAEQLLPVLQRYGFET 254
>gi|260582090|ref|ZP_05849885.1| glutamate racemase [Haemophilus influenzae NT127]
gi|260094980|gb|EEW78873.1| glutamate racemase [Haemophilus influenzae NT127]
Length = 269
Score = 214 bits (546), Expect = 8e-54, Method: Composition-based stats.
Identities = 74/263 (28%), Positives = 130/263 (49%), Gaps = 5/263 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K+ + ++L FDSG+GG V ++ + L+P + ++Y D+ GFPY ++ ++ R +
Sbjct: 4 KEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSERKEESIIHRTLAACQ 63
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T
Sbjct: 64 LINQRYLLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLATK 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++R Y LI + C + + + L E+ G + +K E+ +
Sbjct: 123 GTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPWA---DM 179
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D +VL CTH+PLI + P ++D S +IA+R + LL N +
Sbjct: 180 ADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQVQNEKYNQM 239
Query: 250 LFLSGKPDI-AMRRLMQGFGLKS 271
+ P+ ++ + +G +S
Sbjct: 240 FCTAHFPEESQFKKALHLWGFES 262
>gi|326336585|ref|ZP_08202754.1| glutamate racemase [Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325691250|gb|EGD33220.1| glutamate racemase [Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 259
Score = 214 bits (546), Expect = 8e-54, Method: Composition-based stats.
Identities = 60/251 (23%), Positives = 118/251 (47%), Gaps = 8/251 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I +FDSG+GG + + + L+P +++AD + PYG + ++
Sbjct: 1 MNTPIGLFDSGVGGTTIWRTLVRLLPYEDTLFLADSIHAPYGEKTSEEIIALCEKN-TEY 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L ++ L ++ACNTA T LR+ + + F+G PAIK A Y+Q+ I +L+T +T
Sbjct: 60 LLEHNSKLIIVACNTATTNAISHLRAKYK-VPFIGIEPAIKPAGLYSQTKTIGVLATQST 118
Query: 132 LRRTYTSNLIHS-YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
LR + + + H+ + L +E +I E+ + +E +
Sbjct: 119 LRSAFFARTCQQLFDKGIHVIKQEGVGLVPLIE----EGRINTPEMIELLEKYLQPMIEQ 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHA 249
D +VL CTHYP + + ++ P V +D+++++A++ + +L + + + H
Sbjct: 175 NMDYLVLGCTHYPYLTSLISEILPEKVRIMDSAEAVAKQTQRILSQNQLLTENKATPSHL 234
Query: 250 LFLSGKPDIAM 260
+ +I
Sbjct: 235 WLTNKNVEILQ 245
>gi|309972870|gb|ADO96071.1| Glutamate racemase [Haemophilus influenzae R2846]
Length = 269
Score = 214 bits (546), Expect = 9e-54, Method: Composition-based stats.
Identities = 74/263 (28%), Positives = 129/263 (49%), Gaps = 5/263 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K+ + ++L FDSG+GG V ++ + L+P + ++Y D+ GFPY ++ ++ R +
Sbjct: 4 KEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSERKEESIIHRTLAACQ 63
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T
Sbjct: 64 IINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLATK 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++R Y LI + C + + + L E+ G + +K E+
Sbjct: 123 GTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPWAGM--- 179
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D +VL CTH+PLI + P ++D S +IA+R + LL N +
Sbjct: 180 ADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQVQNEKYNQM 239
Query: 250 LFLSGKPDI-AMRRLMQGFGLKS 271
+ P+ ++ + +G +S
Sbjct: 240 FCTAHFPEESQFKKALHLWGFES 262
>gi|298292133|ref|YP_003694072.1| glutamate racemase [Starkeya novella DSM 506]
gi|296928644|gb|ADH89453.1| glutamate racemase [Starkeya novella DSM 506]
Length = 280
Score = 214 bits (546), Expect = 9e-54, Method: Composition-based stats.
Identities = 95/243 (39%), Positives = 143/243 (58%), Gaps = 3/243 (1%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+IL+FDSG+GGL V +++ P+ F+Y ADD GFPYG + L R++ + ++
Sbjct: 15 PTILVFDSGLGGLSVFRELARTRPDARFVYAADDAGFPYGARSEDDLVARVLAVMDALVA 74
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ P VIACNTA TL+ LR+ + S+ F+G VPAIK A + + +S+L+TP T++
Sbjct: 75 RLAPDAVVIACNTASTLVLPALRARY-SIPFVGTVPAIKPACEGSLTKQVSVLATPGTVK 133
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT LI + C + LV S LA E G K+ ++E EI F+ + RTD
Sbjct: 134 RDYTQALIRDFAGACRVTLVGSTRLAGLAEAAMVGEKVADEEFAAEIAPAFVREGKSRTD 193
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VLACTHYPL++ ++++PWPV W+D + +IARR LL + + LF +
Sbjct: 194 TVVLACTHYPLVLDRLQKVAPWPVRWVDPAPAIARRLSSLLGPVAFAASPAP--LRLFST 251
Query: 254 GKP 256
G+P
Sbjct: 252 GQP 254
>gi|319794071|ref|YP_004155711.1| glutamate racemase [Variovorax paradoxus EPS]
gi|315596534|gb|ADU37600.1| glutamate racemase [Variovorax paradoxus EPS]
Length = 265
Score = 214 bits (546), Expect = 9e-54, Method: Composition-based stats.
Identities = 66/257 (25%), Positives = 112/257 (43%), Gaps = 2/257 (0%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ +FDSG+GGL VL +R +P F+Y AD PYG D + +R + ++
Sbjct: 2 KPVGVFDSGVGGLSVLAALRAELPHERFVYFADTAFAPYGERGDDYVIERSRKVTEQLIA 61
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++ V+ACNTA T LR+ P++ +G PA+K A A +++G IS+++T TL
Sbjct: 62 EHGIGALVVACNTATTAAIHLLRAEHPALPIVGLEPALKPAVATSRTGHISVMATRGTLA 121
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ L S+ + V L +E I + E D
Sbjct: 122 SAKYAALRDSFAGSATVRAVPCDGLVKAIE-GLDTEAIATLCARYMAEAGPFGDAAGEVD 180
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTHYPL+ ++ +P + ++D +A++ R +L + L S
Sbjct: 181 TVVLGCTHYPLVKDQLQRHAPATLRFIDTGAPVAQQTRRVLTAAGRL-SGGEGGLILQSS 239
Query: 254 GKPDIAMRRLMQGFGLK 270
G + + +
Sbjct: 240 GDQSVLEVAAARWLQIS 256
>gi|144900285|emb|CAM77149.1| Asp/Glu racemase [Magnetospirillum gryphiswaldense MSR-1]
Length = 284
Score = 214 bits (546), Expect = 9e-54, Method: Composition-based stats.
Identities = 63/259 (24%), Positives = 102/259 (39%), Gaps = 4/259 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I +FDSG+GGL V + +P +Y+ D PYG + + ++ +
Sbjct: 15 MNCTRPIGVFDSGVGGLTVAAALHRRLPAETLLYLGDVARLPYGTKAPQTIIQYVLRAAA 74
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILST 128
+ + V+ACNTA L FP + LG + A +QAAA + G I + +T
Sbjct: 75 FFR-SHDIKMLVLACNTASAHAAAALAQHFPDLLVLGVIDAGAEQAAAQSPGGRIVVAAT 133
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T R I + I V + + VEE I E I++ + F
Sbjct: 134 EGTCRSGAFDRAIAVHRPTAAITPVPCPLFVALVEEGLTEGPIAEAMIRQYLAEHFQ--G 191
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
D +VL CTH+PL+ R++ +D + ++A RA +L +
Sbjct: 192 DGAADCLVLGCTHFPLLAPSLRKVLGPIPVLVDCAQAVAERAALMLAQKGLAAGSGKGGI 251
Query: 249 ALFLSGKPDIAMRRLMQGF 267
L+ + P F
Sbjct: 252 HLYTTDAPTRFSATAGAFF 270
>gi|313205149|ref|YP_004043806.1| glutamate racemase [Paludibacter propionicigenes WB4]
gi|312444465|gb|ADQ80821.1| glutamate racemase [Paludibacter propionicigenes WB4]
Length = 282
Score = 214 bits (546), Expect = 9e-54, Method: Composition-based stats.
Identities = 59/261 (22%), Positives = 103/261 (39%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG GGL +L+K+R +PEY +IY+ D+ PYG + K + + L +
Sbjct: 13 PIGIFDSGYGGLTILEKIRTELPEYDYIYLGDNARTPYGTRSFDVVYKFTLECVTK-LFE 71
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLG------AVPAIKQAAAYTQSGLISILST 128
L V+ACNTA ++ + P ++ A T+S I +L+T
Sbjct: 72 MGCQLVVLACNTASAKALRSIQQRDLPLLDANRRVLGVIRPTVEAVGAMTRSKHIGLLAT 131
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ IH + + + +E + + ++K +E
Sbjct: 132 SGTVQSNSYPLEIHKLHDDIVVTSEACPMWVPLIENNEHKSEGADYFVRKNVEHLLAA-- 189
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFD 246
+ D I+L CTHYPL+ + L P + + + +A+ L R ++R
Sbjct: 190 DPKIDTIMLGCTHYPLLEDKIKSLLPKEISVVSQGEIVAKSLADYLQRHTEMESRCTKNA 249
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
F + +
Sbjct: 250 SIRYFSTESVEKFSSSASVFL 270
>gi|294674929|ref|YP_003575545.1| glutamate racemase [Prevotella ruminicola 23]
gi|294473325|gb|ADE82714.1| glutamate racemase [Prevotella ruminicola 23]
Length = 277
Score = 214 bits (546), Expect = 9e-54, Method: Composition-based stats.
Identities = 60/261 (22%), Positives = 103/261 (39%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG GGL +L +R L+PEY ++Y+ D+ PYG + + L +
Sbjct: 8 PIGIFDSGYGGLTILHGIRQLLPEYDYLYLGDNARAPYGPRSFDVVYEFTRQAVVK-LFE 66
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ CNTA + +++L P LG + P + T S + +L+T
Sbjct: 67 MGCHLVILGCNTASAKALRTIQQNDLPKIDPERRVLGIIRPTAEVIGDLTTSKHVGVLAT 126
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ IH + V+ VE + +KK I+ I ++
Sbjct: 127 EGTIKSESYDLEIHKLFPDIKVSGVACPFWVPLVEYNEADSPGADYFVKKRIDE--IMRK 184
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFD 246
D I+L CTHYPL++ + P V + + +A + L R + +
Sbjct: 185 DPDIDTIILGCTHYPLLMPKILKYLPAGVRVVPQGEYVAESLKQYLERHPNIEAKCSKGA 244
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ P+ +
Sbjct: 245 GVHYLTTENPNKFKEQAQIFL 265
>gi|307730275|ref|YP_003907499.1| glutamate racemase [Burkholderia sp. CCGE1003]
gi|307584810|gb|ADN58208.1| glutamate racemase [Burkholderia sp. CCGE1003]
Length = 290
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 68/245 (27%), Positives = 107/245 (43%), Gaps = 9/245 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ + IFDSG+GGL VL+ +R +P+ +YVAD + PYG +D + R + + + L
Sbjct: 19 RAPVGIFDSGLGGLSVLRAVRAQLPDEALLYVADSLYAPYGERDDDFIADRTLAI-GEWL 77
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA +R S+ +G P IK AA ++S + +L+T TL
Sbjct: 78 ARQGAKALVIACNTATAQSIALVRERL-SIPLVGVEPGIKPAALQSRSRVAGVLATQVTL 136
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R T L+ Y + C L VE G +++ + G
Sbjct: 137 RSTRFQALLERYAADCRFICQPGHGLVQAVERCDVG----SAQLRALLAGYLQPMLEAGA 192
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR---VFDDHA 249
D +VL CTHYP + R + + +D S +IAR+ +L +
Sbjct: 193 DTLVLGCTHYPFLDAAIRDIVGERMALIDTSVAIARQLERVLEQHGLRAAPHATGAPLPR 252
Query: 250 LFLSG 254
F +
Sbjct: 253 FFSTD 257
>gi|297242787|ref|ZP_06926725.1| glutamate racemase [Gardnerella vaginalis AMD]
gi|296888998|gb|EFH27732.1| glutamate racemase [Gardnerella vaginalis AMD]
Length = 257
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 59/260 (22%), Positives = 106/260 (40%), Gaps = 7/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
L +I +FDSG+GG+ V +++ +P +Y D PYG +KK +
Sbjct: 1 MALSAAIGVFDSGLGGISVARQLHAALPHERIVYFGDSANAPYGIKTPEEVKKLSFAIVE 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--S 127
+ VIACNTA + ++LR+ + ++ +G PA+K A + ++ +
Sbjct: 61 HFVRL-NVKAVVIACNTATSAAVNDLRAHY-NIPIIGMEPALKLACDLGKGESQRVIVAA 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TP TLR ++L+ + I L VE D + + F E
Sbjct: 119 TPLTLRERKFADLLQRFSQNNTIFSQPCPDLVRIVERGELN---DRDVVFAALHKYFDEY 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+ D +VL CTH+ FR+ P + +D ++ R +L N + +
Sbjct: 176 DLDSIDSVVLGCTHFVFYRDYFREFLPARTNIVDGNEGTINHLRKILELNNELASDSQEG 235
Query: 248 HALFLSGKPDIAMRRLMQGF 267
+ + M++L +
Sbjct: 236 SITLTNSDTSLRMQQLAKSL 255
>gi|110637498|ref|YP_677705.1| glutamate racemase [Cytophaga hutchinsonii ATCC 33406]
gi|110280179|gb|ABG58365.1| glutamate racemase [Cytophaga hutchinsonii ATCC 33406]
Length = 266
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 63/254 (24%), Positives = 117/254 (46%), Gaps = 6/254 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I IFDSG+GGL +L K+ +P F Y D PYG +++ + + +
Sbjct: 1 MHQPIGIFDSGVGGLTLLDKLVHALPAESFEYYGDSGNCPYGTKTIEEIRQHTIRIMDYL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ K+ + ++ACNT T I D+LRS +P M +G P K A A + + I IL+T T
Sbjct: 61 MQKH-CKMIIVACNTITTNIIDQLRSIYP-MPIVGMEPGTKPAYASSANKRIGILATAGT 118
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + S+ + L +E+ I++ + +++E
Sbjct: 119 INGQLYNRTLESFNDKAFFISQIGAGLVELIEQNI----IEQARMMQQLEPLLKPMIDAH 174
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTHY + +V + P+P++ +D D++ R+ + +L T +
Sbjct: 175 IDTLVLGCTHYNYLTNVLAGMFPYPIEIIDTRDAVTRQVQRILQEKALKATGTERSVTIT 234
Query: 252 LSGKPDIAMRRLMQ 265
+G ++ + L +
Sbjct: 235 TTGDMEMLKQILKR 248
>gi|148272474|ref|YP_001222035.1| glutamate racemase [Clavibacter michiganensis subsp. michiganensis
NCPPB 382]
gi|147830404|emb|CAN01339.1| murI [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
Length = 294
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 53/258 (20%), Positives = 93/258 (36%), Gaps = 8/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + L+P Y+ D PYG+ +++ + + D L
Sbjct: 3 DAPIGIFDSGVGGLTVARAVATLLPRESITYIGDTAHTPYGDKPIADVRRYALAVLDD-L 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACNTA + + R + PA++ A + T++ + +++T AT+
Sbjct: 62 VERGVKMLVIACNTASAAMLRDARERYDIPVVEVIQPAVRTAVSVTRNHRVGVIATHATV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + + + VE E+ EG
Sbjct: 122 TSRAYDDAFAA-APHLELTSAEAPDFVAFVERGVTSG----PELMAAAEGYLAPLRAAGI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF- 251
D +VL CTHYP + L V + + A+ L + +
Sbjct: 177 DTLVLGCTHYPFLEGAISLLMGPDVTLVSSDTETAKDVYRELVSAGLERRSDAPPVIRYE 236
Query: 252 -LSGKPDIAMRRLMQGFG 268
G + G
Sbjct: 237 ATGGSASDFETLAHRMLG 254
>gi|319776733|ref|YP_004139221.1| glutamate racemase [Haemophilus influenzae F3047]
gi|329123156|ref|ZP_08251726.1| glutamate racemase [Haemophilus aegyptius ATCC 11116]
gi|317451324|emb|CBY87562.1| glutamate racemase [Haemophilus influenzae F3047]
gi|327471711|gb|EGF17153.1| glutamate racemase [Haemophilus aegyptius ATCC 11116]
Length = 269
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 74/263 (28%), Positives = 129/263 (49%), Gaps = 5/263 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K+ + ++L FDSG+GG V ++ + L+P + ++Y D+ GFPY ++ ++ R +
Sbjct: 4 KEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSERKEESIIHRTLAACQ 63
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T
Sbjct: 64 LINQRYPLDAMVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLATK 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++R Y LI + C + + + L E+ G + +K E+
Sbjct: 123 GTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSSWAGM--- 179
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D +VL CTH+PLI + P ++D S +IA+R + LL N +
Sbjct: 180 ADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQAQNEKYNQM 239
Query: 250 LFLSGKPDI-AMRRLMQGFGLKS 271
+ P+ ++ + +G +S
Sbjct: 240 FCTAHFPEESQFKKALHLWGFES 262
>gi|163846057|ref|YP_001634101.1| glutamate racemase [Chloroflexus aurantiacus J-10-fl]
gi|222523790|ref|YP_002568260.1| glutamate racemase [Chloroflexus sp. Y-400-fl]
gi|163667346|gb|ABY33712.1| glutamate racemase [Chloroflexus aurantiacus J-10-fl]
gi|222447669|gb|ACM51935.1| glutamate racemase [Chloroflexus sp. Y-400-fl]
Length = 262
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 65/253 (25%), Positives = 115/253 (45%), Gaps = 10/253 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL V++ + +P+ +Y+AD PYG ++ R + L
Sbjct: 2 IGIFDSGLGGLSVMRAIHERLPDTDLLYLADSAYCPYGPRPLSEIRDRALA-CGRWLVDQ 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA + LR P + +G P +K A A T++G +++L+T TL
Sbjct: 61 GARIVVVACNTATAAAIELLRRELP-VPVVGMEPGVKPAVAATRNGKVAVLATSGTLASD 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+L+ +Y + ++ ++ L ++VE ++ D+ + IE DVI
Sbjct: 120 RFRSLVQAYAAGVEVYPLACPDLVAQVEAGE----LQSDQTRNLIEQHLATV--PEVDVI 173
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+P + + + V +D ++A + + +IN +G
Sbjct: 174 VLGCTHFPPLKPLIATCAGSHVTVIDTGPAVAAQTERIARQINVPAGS--GTIRCATTGD 231
Query: 256 PDIAMRRLMQGFG 268
P + L +G
Sbjct: 232 PQLVAPALYNVWG 244
>gi|296274260|ref|YP_003656891.1| glutamate racemase [Arcobacter nitrofigilis DSM 7299]
gi|296098434|gb|ADG94384.1| glutamate racemase [Arcobacter nitrofigilis DSM 7299]
Length = 266
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 65/256 (25%), Positives = 120/256 (46%), Gaps = 7/256 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ +FDSGIGGL V++ + ++ Y+AD PYG + K + + ++
Sbjct: 2 KVGVFDSGIGGLTVVKAITEVLKGAEIFYIADTKFAPYGEKSKEQILKHSFNIANYLVKT 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ V+ACNTA + ELR FP++ +G P IK A + +++G I IL+TPATL+
Sbjct: 62 HNIDALVVACNTATSAAIKELREEFPNLIVVGTEPGIKPAISLSKNGKIGILATPATLKG 121
Query: 135 TYTSNL---IHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L + + S ++ + L ++E I+ ++ + ++ K
Sbjct: 122 EKYQLLVDKLSNASSNITLYEQACPGLVQQIE----NGDIEGEKTFEMLKNWLKPMSEKG 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D IVL CTHYPL+ +V +++ + ++ +IA R + L V + F
Sbjct: 178 VDTIVLGCTHYPLVGNVIKKIMGENTNLIETGYAIANRLKDLSKNCGHFNDGVLKVNVYF 237
Query: 252 LSGKPDIAMRRLMQGF 267
S + + +++ +
Sbjct: 238 TSDINETMISKILNSW 253
>gi|315298482|gb|EFU57737.1| hypothetical protein HMPREF9545_02463 [Escherichia coli MS 16-3]
Length = 262
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 83/256 (32%), Positives = 140/256 (54%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFIVERVVEIVTAVQERYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y
Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S + E G + D +K+ + KE D +V
Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+S +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSSAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238
Query: 257 D-IAMRRLMQGFGLKS 271
+ + ++Q +G ++
Sbjct: 239 EAEQLLPVLQRYGFET 254
>gi|315607047|ref|ZP_07882051.1| glutamate racemase [Prevotella buccae ATCC 33574]
gi|315251101|gb|EFU31086.1| glutamate racemase [Prevotella buccae ATCC 33574]
Length = 278
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 56/261 (21%), Positives = 98/261 (37%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG GGL +L +R L+PEY ++Y+ D+ PYG + + L +
Sbjct: 9 PIGIFDSGYGGLTILHGIRQLLPEYDYVYLGDNARAPYGTRSFDVVYQFTRQAVIK-LFE 67
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ CNTA + ++ P LG + P + T++ + + +T
Sbjct: 68 MGCHLVILGCNTASAKALRSIQHRDIPELDPGRRVLGVIRPTAEVIGELTRNNHVGLFAT 127
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+R + I + V+ VE + +KK ++ ++
Sbjct: 128 EGTVRSCSYNLEIGKLWPDIKVTGVACPFWVPLVEYNEADSPGADYFVKKRVDELM--RK 185
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFD 246
D I+L CTHYPL++ + P V + + +A + R +
Sbjct: 186 DPEIDTIILGCTHYPLLMPKILKYVPPGVRIIPQGEYVADSLKAYFERHPAMERMCTRGG 245
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
F + PD
Sbjct: 246 TCEYFTTENPDRFKDSARMFL 266
>gi|261415102|ref|YP_003248785.1| glutamate racemase [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|261371558|gb|ACX74303.1| glutamate racemase [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|302327044|gb|ADL26245.1| glutamate racemase [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 269
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 58/263 (22%), Positives = 107/263 (40%), Gaps = 10/263 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL +LQK+R +P+Y ++Y+ D+ PYG+ + + + L
Sbjct: 2 IGVFDSGFGGLTILQKLRHTLPQYDYLYLGDNARAPYGSRSFETIYRYTLQSV-RELFHR 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLG------AVPAIKQAAAYTQSGLISILSTP 129
L ++ACNTA ++ + F P ++ ++++G I I +T
Sbjct: 61 GCPLVILACNTASAKALRSIQQQVLPVEFPDRRVLGIVRPTAEEIGNFSKTGHIGIFATA 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ I + + + + VE G + +KK+++
Sbjct: 121 GTVSSNSYVLEISHFFPNLKVTQHACPMWVPLVEYGERGTEGARFFVKKDVDQLLAA--D 178
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI-NTHQTRVFDDH 248
D ++LACTHYPL+ R P V + D +A + L R +
Sbjct: 179 PEIDTVLLACTHYPLLEDEIRAALPPHVRLVVQGDIVADKTLDYLKRHVDMENRLSKGGS 238
Query: 249 ALFLSGKPDIAMRRLMQGFGLKS 271
+L+ ++ FG+++
Sbjct: 239 VHYLTTDTAEFFKKGAFRFGMEN 261
>gi|187934900|ref|YP_001884328.1| glutamate racemase [Clostridium botulinum B str. Eklund 17B]
gi|229486235|sp|B2THT3|MURI_CLOBB RecName: Full=Glutamate racemase
gi|187723053|gb|ACD24274.1| glutamate racemase [Clostridium botulinum B str. Eklund 17B]
Length = 258
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 66/258 (25%), Positives = 109/258 (42%), Gaps = 6/258 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K I FDSG+GGL V+++ LMP ++IY D PYG ++ F +
Sbjct: 3 KKNRPIGFFDSGVGGLSVMKEAIRLMPNENYIYFGDSKNAPYGVKTVEEVRTLT-FNAVE 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L + V+ACNTA + D +RS + ++ +G PA+K A Y + G I I++TP
Sbjct: 62 SLLEKNVKAIVVACNTATSAAIDLVRSKYENIPIIGIEPALKLATKYNRKGNIIIMATPM 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TL+ +L+ Y I + L +E + E+ +K++ F +
Sbjct: 122 TLKENKFKSLMEKYGENYDIVSLPCAKLVEFIEHGILSGEELEEYLKEK----FKPYKNN 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHA 249
V+VL CTHYP I ++ + +D ++ R L N T
Sbjct: 178 DIGVVVLGCTHYPFIKETLYKVIDKDIPIIDGGLGTSQELRRRLEEKNLLNTEEKQGSIT 237
Query: 250 LFLSGKPDIAMRRLMQGF 267
+ S + + +
Sbjct: 238 IINSNGSEKMIELSKKLI 255
>gi|88810229|ref|ZP_01125486.1| glutamate racemase [Nitrococcus mobilis Nb-231]
gi|88791859|gb|EAR22969.1| glutamate racemase [Nitrococcus mobilis Nb-231]
Length = 284
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 65/255 (25%), Positives = 109/255 (42%), Gaps = 6/255 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I IFDSG+GGL V+ +R L+P +YVAD PYG ++ R + L L
Sbjct: 6 DDPIGIFDSGLGGLSVVHAIRRLLPTEQLLYVADCAHAPYGGCSAAFIRTRALALAG-FL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA + LR F + + PA+K+AAA T+ ++ +L+T TL
Sbjct: 65 QTQRAKALVVACNTATAAAAEALRRQF-ELPIIAMEPAVKRAAAATRCNVVGVLATEGTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ L+ + + + L VE E + +E + +
Sbjct: 124 ASARFAGLLARFAGAVQVVTRPAPDLVLLVERGEIDGI----EAMRRVEAHVSYLLHQGS 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D IVL CTHYP + + + + + +D ++AR R L + ++
Sbjct: 180 DTIVLGCTHYPHLRPLIERAAGPEIAIIDTGPAVARELRRRLEEKDLVRSSAGGGLIRIW 239
Query: 253 SGKPDIAMRRLMQGF 267
+ + R + Q
Sbjct: 240 TSATTSSARAIAQRL 254
>gi|228471185|ref|ZP_04055998.1| glutamate racemase [Porphyromonas uenonis 60-3]
gi|228307000|gb|EEK16082.1| glutamate racemase [Porphyromonas uenonis 60-3]
Length = 281
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 53/270 (19%), Positives = 108/270 (40%), Gaps = 14/270 (5%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
++++ I +FDSG GGL +L+K+R +P+Y F+Y+ D+ PYG+ H + +
Sbjct: 1 MQQIEGPIGVFDSGYGGLTILRKLREQLPQYDFVYLGDNARSPYGSRSMHVVYQFTREAV 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRST---------FPSMAFLGAVPAIKQAAAYTQ 119
L L ++ACNTA +++ P ++ T
Sbjct: 61 EK-LFDLGCPLVILACNTASAKALRQIQQEDLPKLDGGSMRRRVLGIIRPTVECIDTLTG 119
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+ + IL+T T+ IH + + + VE + ++K
Sbjct: 120 TKHVGILATEGTVSSESYVAEIHKLYPDMTVVQEACPLWVPIVETGESDSPGTDFFVRKH 179
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
+E + ++ D I+L CTHYP+++ ++L + + + +A+ L R
Sbjct: 180 LERLLAQ--DEKIDTIILGCTHYPILMPKIQRLLTPSIKVVAQGELVAKSLEEYLVRHPE 237
Query: 240 HQTRVF--DDHALFLSGKPDIAMRRLMQGF 267
+ ++ + + + + R F
Sbjct: 238 MEAQLTRGGTTRYYTTEQTERFSRTASIFF 267
>gi|149278811|ref|ZP_01884946.1| glutamate racemase [Pedobacter sp. BAL39]
gi|149230430|gb|EDM35814.1| glutamate racemase [Pedobacter sp. BAL39]
Length = 276
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 61/267 (22%), Positives = 105/267 (39%), Gaps = 11/267 (4%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ SI IFDSG GGL V + + +P+Y++IY+ D+ PYG+ + + +
Sbjct: 1 MNISQSIGIFDSGFGGLTVFKSIAQKLPQYNYIYLGDNSRAPYGDRSFETVYRYTLECVE 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRS------TFPSMAFLGAVPAIKQAAAYTQSGLI 123
L L ++ACNTA ++ P + Y+ S I
Sbjct: 61 -WLFGQGCPLVILACNTASAKALRSIQQKVLPFKYPDRRVLGVIRPTAEVVGNYSNSRTI 119
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
++ T T++ + + + + S + +E + + +KK +
Sbjct: 120 GVMGTRGTVKSESYLIEVAKFFPEIKVLQQSCPLWVPLIENNEHIHEGADYFLKKYLGQL 179
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
+ D I+LACTHYPL++ R L P V L + +A L R + R
Sbjct: 180 LA--KDDAIDCILLACTHYPLLIPKLRALLPEKVALLGQGEIVADSLVDYLERHPEMKDR 237
Query: 244 VFDDH--ALFLSGKPDIAMRRLMQGFG 268
+ D F SG + ++ FG
Sbjct: 238 LARDREMRFFTSGDTSVFDQQASIFFG 264
>gi|139438502|ref|ZP_01772018.1| Hypothetical protein COLAER_01010 [Collinsella aerofaciens ATCC
25986]
gi|133776041|gb|EBA39861.1| Hypothetical protein COLAER_01010 [Collinsella aerofaciens ATCC
25986]
Length = 294
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 88/269 (32%), Gaps = 15/269 (5%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GGL V + + +P Y D PYG + ++ + L
Sbjct: 12 RPIGVFDSGLGGLTVARAIATALPHESVYYFGDTKRCPYGTRTEDEVRSFALQ-AGRWLS 70
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
K+ + VIACNTA + P + A T++ + +L+T T+R
Sbjct: 71 KHDVKIMVIACNTATAAALRLAQQVLDVPVIGVIAPGARAAINSTRTRRVGVLATNLTIR 130
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI------------KIKEDEIKKEIE 181
+ I + ++ + VE ++ +
Sbjct: 131 SGAYTRAIQDLDAGVDVYGCPASSFVEVVEHELASGAHLQEQWLENEDIFDTPAVRALVG 190
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D +VL CTH+PL+V R V + +++ R +L R
Sbjct: 191 ATVEPLRDRGIDTVVLGCTHFPLLVGPIRHALGPGVRVVSSAEETTRELTDILTRREQLA 250
Query: 242 -TRVFDDHALFLSGKP-DIAMRRLMQGFG 268
H + FG
Sbjct: 251 GDAAEPQHRFATTSDNIAEFAVAGSFIFG 279
>gi|37678352|ref|NP_932961.1| glutamate racemase [Vibrio vulnificus YJ016]
gi|61214264|sp|Q7MQ40|MURI_VIBVY RecName: Full=Glutamate racemase
gi|37197091|dbj|BAC92932.1| glutamate racemase [Vibrio vulnificus YJ016]
Length = 263
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 79/265 (29%), Positives = 136/265 (51%), Gaps = 11/265 (4%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
E Q ++LIFDSG+GGL V Q++ +PE ++ Y+ D+ +PYG L R+ L
Sbjct: 2 ESSNQPNVLIFDSGVGGLSVFQEINKRLPEVNYYYLFDNQAYPYGELSQETLLARVEALV 61
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ ++ L VIACNTA T++ LR+ P + +G VPAIK A+ + + +++T
Sbjct: 62 VKMTQQFAIDLVVIACNTASTIVLPALRAKLP-IPVVGVVPAIKPASLL-ANRAVGLIAT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
PAT+ R YT +LI + + + L+ S L EE G ++ + E+ ++
Sbjct: 120 PATVTRQYTHDLIRDFAHEKEVELLGSTRLVDIAEEKLRGRQVDQQELAMILKPM----- 174
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
+ DV VL CTH+PL+ +Q+ + +D+ ++IARR + LL
Sbjct: 175 KHKVDVAVLGCTHFPLLKEEIQQVLGDEIILVDSGEAIARRVQSLL--HQLSPQSTKTPW 232
Query: 249 ALFLSGKP--DIAMRRLMQGFGLKS 271
+F + +P + A+ ++ G +
Sbjct: 233 RIFSTAQPWDEAALNGSLKTMGFNA 257
>gi|34540498|ref|NP_904977.1| glutamate racemase [Porphyromonas gingivalis W83]
gi|34396811|gb|AAQ65876.1| glutamate racemase [Porphyromonas gingivalis W83]
Length = 274
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 58/265 (21%), Positives = 103/265 (38%), Gaps = 12/265 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ SI IFDSG GGL +L ++R LMPEY+F+Y+ D+ PYGN + K +
Sbjct: 1 MNPSIGIFDSGYGGLTILSEIRKLMPEYNFVYLGDNARSPYGNRSYEVVYKFTLQAVRK- 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELR-------STFPSMAFLGAVPAIKQAAAYTQSGLIS 124
L + L ++ACNTA ++ P ++ T++ +
Sbjct: 60 LFELGCPLVILACNTASAKALRTIQQRDLPNMEDPTRRVLGIIRPTVEAVDEITRTKHVG 119
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+L+T T+ I + + + + VE + I+K ++
Sbjct: 120 VLATQGTVSSHSYQLEIAKLFPEISVTEEACPMWVPLVETGESDSPGADYFIRKHLDSII 179
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QT 242
+ D I+LACTHYPL+ ++L + + + +A + L R +
Sbjct: 180 A--KDDTIDTIILACTHYPLLRPKMKRLLTPTIKLIAQGELVAHSLKDYLSRHPEMDRRI 237
Query: 243 RVFDDHALFLSGKPDIAMRRLMQGF 267
+ + + PD
Sbjct: 238 EKGGKTSYYTTESPDKFGELASLFL 262
>gi|91787921|ref|YP_548873.1| glutamate racemase [Polaromonas sp. JS666]
gi|91697146|gb|ABE43975.1| glutamate racemase [Polaromonas sp. JS666]
Length = 281
Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 74/273 (27%), Positives = 108/273 (39%), Gaps = 15/273 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+I +FDSGIGGL +L+ +R +P +F+YVAD PYG ED + R + +L
Sbjct: 3 SQAIGVFDSGIGGLSILKALRAELPHENFVYVADSGHAPYGEREDCFVVARSRAITRHLL 62
Query: 73 DKYQPVL--SVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+ + VIACNTA LR P++ +G PA+K A +++ I +++T
Sbjct: 63 TQQHVKVKALVIACNTATAAAIHLLREEHPNLPIIGVEPALKPATLLSRTRRIGVMATRG 122
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE---- 186
TL L S Q L LA +E + + C
Sbjct: 123 TLASARFKRLRDSLAGQAEFVLQPCDGLADAIERGIDDKADPGSAT-EILAACAHHTRAM 181
Query: 187 ----KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN---- 238
D +VL CTHYP R L V +LD +AR+ R LP
Sbjct: 182 GPFGLNEGEIDTLVLGCTHYPFASEHLRALLGPHVQFLDTGAPVARQTRLRLPAAEPQTV 241
Query: 239 THQTRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
LF +G+ + + L S
Sbjct: 242 APAAPGMGQVKLFTTGQTNTLQAAVQHWLQLDS 274
>gi|332300836|ref|YP_004442757.1| Glutamate racemase [Porphyromonas asaccharolytica DSM 20707]
gi|332177899|gb|AEE13589.1| Glutamate racemase [Porphyromonas asaccharolytica DSM 20707]
Length = 281
Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 52/270 (19%), Positives = 106/270 (39%), Gaps = 14/270 (5%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
++++ I +FDSG GGL +L+K++ +P+Y F+Y+ D+ PYG+ + +
Sbjct: 1 MQQIEGPIGVFDSGYGGLTILRKLQEQLPQYDFVYLGDNARSPYGSRSMRVVYQFTREAV 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRST---------FPSMAFLGAVPAIKQAAAYTQ 119
L L ++ACNTA +++ P ++ T
Sbjct: 61 ER-LFDLGCPLVILACNTASAKALRQIQQEDLPKLDGGSMRRRVLGIIRPTVECIDTLTG 119
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+ + IL+T T+ IH + + + VE + ++K
Sbjct: 120 TKHVGILATEGTVSSESYVTEIHKLYPDVTVVQEACPLWVPIVETGESDSPGADFFVRKH 179
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
+E + ++ D I+L CTHYP+++ R+L + + + +A+ L R
Sbjct: 180 LERLLAQ--DEKIDTIILGCTHYPILMPKIRRLLTPTIKVVSQGELVAKSLEEYLVRHPE 237
Query: 240 HQTRVF--DDHALFLSGKPDIAMRRLMQGF 267
++ + + + + R F
Sbjct: 238 MAAQLTRGGTTRYYTTEQTERFSRTASIFF 267
>gi|237725975|ref|ZP_04556456.1| glutamate racemase [Bacteroides sp. D4]
gi|229435783|gb|EEO45860.1| glutamate racemase [Bacteroides dorei 5_1_36/D4]
Length = 281
Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 62/270 (22%), Positives = 102/270 (37%), Gaps = 11/270 (4%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P I +FDSG GGL +L K+R LMPEY +IY+ D PYG + + +
Sbjct: 3 PSLPPSTGPIGVFDSGYGGLTILDKIRGLMPEYDYIYLGDSARCPYGPRSFEVVYEFTLQ 62
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLG------AVPAIKQAAAYTQS 120
S L + L ++ACNTA ++ + P + T+S
Sbjct: 63 AVSK-LFELGCPLVILACNTASAKALRTIQQINLPVIDATRRVLGVIRPTAECIGEITRS 121
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+ IL+T T++ IH + + + S VE + + +K+ I
Sbjct: 122 RHVGILATAGTIKSESYLLEIHKLSPDIVVTGEACPMWVSLVENNEYQSEGADYFVKQHI 181
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ D I+L CTHYPL++ RQ +P + + + +AR + L R
Sbjct: 182 NRLLD--KDPMIDTIILGCTHYPLLLDKIRQFTPGHIRIIAQGEYVARSLQDYLNRHPEM 239
Query: 241 --QTRVFDDHALFLSGKPDIAMRRLMQGFG 268
+ + + G
Sbjct: 240 DARCEKGGKCRFLTTESENKFEESASIFLG 269
>gi|116493005|ref|YP_804740.1| glutamate racemase [Pediococcus pentosaceus ATCC 25745]
gi|730082|sp|Q08783|MURI_PEDPE RecName: Full=Glutamate racemase
gi|122265531|sp|Q03ES4|MURI_PEDPA RecName: Full=Glutamate racemase
gi|349029|gb|AAA16761.1| glutamate racemase [Pediococcus pentosaceus]
gi|435999|gb|AAC36914.1| glutamate racemase [Pediococcus pentosaceus]
gi|116103155|gb|ABJ68298.1| glutamate racemase [Pediococcus pentosaceus ATCC 25745]
Length = 265
Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 48/256 (18%), Positives = 90/256 (35%), Gaps = 6/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++ + L+P I++ D+ PYG + + + S L
Sbjct: 3 NRPIGFMDSGVGGLTVVKTAQKLLPNEEIIFIGDEARMPYGPRPTAEVVEFSRQMAS-FL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
VIACNTA L++ P +P A T++ I +++T T+
Sbjct: 62 MTKNIKALVIACNTATNAALAVLQAELPIPVIGVILPGAIAANRQTKNQKIGVIATLGTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + ++ + V+ E+ + +K + E +
Sbjct: 122 KSEAYPKALAEINTKLRAYPVACQEFVEIAEKNE----LHTTAAQKVMNEKLAEFRQDQI 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHALF 251
D ++L CTH+PL+ + V +D + +L + H +
Sbjct: 178 DTLILGCTHFPLLEEGIQAAVGPDVTLVDPGVETVHQLIEILTKQALQHAEGPKAQDQYY 237
Query: 252 LSGKPDIAMRRLMQGF 267
+G
Sbjct: 238 STGNIKNFEEIARTFL 253
>gi|78043344|ref|YP_359176.1| glutamate racemase [Carboxydothermus hydrogenoformans Z-2901]
gi|123577026|sp|Q3AFA8|MURI_CARHZ RecName: Full=Glutamate racemase
gi|77995459|gb|ABB14358.1| glutamate racemase [Carboxydothermus hydrogenoformans Z-2901]
Length = 265
Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 52/255 (20%), Positives = 98/255 (38%), Gaps = 10/255 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GG+ VL+++ L+P +F Y+ D PYG+ L + L
Sbjct: 8 IGIFDSGVGGVTVLKELINLLPGENFYYLGDTAHVPYGSKSKEELLILGDAIIRFFLKL- 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V ACNT+ + L+ +P + P K A + + +L+T AT++
Sbjct: 67 GVKMVVFACNTSSAITLPILKERYPVLMEGMLEPLRKNMPAKAK---VGVLATEATVKSG 123
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ +++++ +E+ + E+++ F + +
Sbjct: 124 LYQKKLMETNKFQEVYMIACPQYVPLIEKGI----VSGKEVEEATREYFEPLLKEEVRDV 179
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTHYP + ++L P + +D + +AR L +++G
Sbjct: 180 VLGCTHYPFLTETIQKLYPK-IQVIDPAAYVAREVYRKLKENKLL-GENGGKVQFYVTGD 237
Query: 256 PDIAMRRLMQGFGLK 270
G
Sbjct: 238 EKSLKNLGSLYLGYN 252
>gi|27364591|ref|NP_760119.1| glutamate racemase [Vibrio vulnificus CMCP6]
gi|320154994|ref|YP_004187373.1| glutamate racemase [Vibrio vulnificus MO6-24/O]
gi|29839520|sp|Q8DD39|MURI_VIBVU RecName: Full=Glutamate racemase
gi|27360710|gb|AAO09646.1| glutamate racemase [Vibrio vulnificus CMCP6]
gi|319930306|gb|ADV85170.1| glutamate racemase [Vibrio vulnificus MO6-24/O]
Length = 263
Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 79/265 (29%), Positives = 136/265 (51%), Gaps = 11/265 (4%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
E Q ++LIFDSG+GGL V Q++ +PE ++ Y+ D+ +PYG L R+ L
Sbjct: 2 ESSNQPNVLIFDSGVGGLSVFQEINKRLPEVNYYYLFDNQAYPYGELSQETLLARVEALV 61
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ ++ L VIACNTA T++ LR+ P + +G VPAIK A+ + + +++T
Sbjct: 62 VKMTQQFAIDLVVIACNTASTIVLPTLRAKLP-IPVVGVVPAIKPASLL-ANRAVGLIAT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
PAT+ R YT +LI + + + L+ S L EE G ++ + E+ ++
Sbjct: 120 PATVTRQYTHDLIRDFAHEKEVELLGSTRLVDIAEEKLRGRQVDQQELAMILKPM----- 174
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
+ DV VL CTH+PL+ +Q+ + +D+ ++IARR + LL
Sbjct: 175 KHKVDVAVLGCTHFPLLKEEIQQVLGDEIILVDSGEAIARRVQSLL--HQLSPQSTKTPW 232
Query: 249 ALFLSGKP--DIAMRRLMQGFGLKS 271
+F + +P + A+ ++ G +
Sbjct: 233 RIFSTAQPWDEAALNGSLKTMGFNA 257
>gi|261856843|ref|YP_003264126.1| glutamate racemase [Halothiobacillus neapolitanus c2]
gi|261837312|gb|ACX97079.1| glutamate racemase [Halothiobacillus neapolitanus c2]
Length = 288
Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 66/256 (25%), Positives = 107/256 (41%), Gaps = 7/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V Q +R +P IY+AD PYG+ + +R + + L
Sbjct: 14 SAPIGIFDSGVGGLSVYQAVRHALPAEDIIYIADSGHAPYGDRSSDFITERAVA-MTGFL 72
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
V+ACNTA + +LR F S+ + PAIK A +++SG I +L+T T+
Sbjct: 73 VAAGAKAVVVACNTATVIAVAQLRRQF-SIPIIALEPAIKPAIEHSRSGTIGVLATRKTI 131
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
L + + + L +VE + I++ +E
Sbjct: 132 ESPAVERLCRIHGANTRVLLQPCPGFVEQVERGEMEHPKTYELIRRYVE----PLLASGA 187
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALF 251
D +VL CTHY + R + V LD+S ++AR+ + + + + F
Sbjct: 188 DTLVLGCTHYVYLAQQIRAIVGPDVTILDSSAAVARQVGRRIGSSSVAASDGRITEDQFF 247
Query: 252 LSGKPDIAMRRLMQGF 267
+ R +M
Sbjct: 248 TTAASTDHARTVMSTL 263
>gi|254247709|ref|ZP_04941030.1| Glutamate racemase [Burkholderia cenocepacia PC184]
gi|124872485|gb|EAY64201.1| Glutamate racemase [Burkholderia cenocepacia PC184]
Length = 285
Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 67/259 (25%), Positives = 105/259 (40%), Gaps = 8/259 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ IFDSG+GGL VL+ R +P+ F+YVAD PYG ++ + +R + + + L +
Sbjct: 15 PVGIFDSGLGGLSVLRAARAHLPDESFVYVADSHHAPYGPRDEAFITERTLAI-GEWLAR 73
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
VIACNTA +R S+ +G P IK AAA +++G+ +L+T +TL
Sbjct: 74 EGAKALVIACNTATARAIAAIRECL-SIPLVGVEPGIKPAAALSETGVAGVLATQSTLNS 132
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
L+ Y + L +E ++ +E D
Sbjct: 133 PRFQALLDRYGAGRRFICQPGHGLVEAIERGDTN----SPALRALLERYIQPMLDDGADT 188
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV--FDDHALFL 252
+VL CTHYP R L + +D SD+IAR+ +L
Sbjct: 189 LVLGCTHYPFFTETIRDLVGERLTIVDTSDAIARQLARVLDERGLRAPAGTHAAPPRFCS 248
Query: 253 SGKPDIAMRRLMQGFGLKS 271
+ GL +
Sbjct: 249 TSDGLQLHALASTLLGLDA 267
>gi|113461596|ref|YP_719665.1| glutamate racemase [Haemophilus somnus 129PT]
gi|123132293|sp|Q0I5M2|MURI_HAES1 RecName: Full=Glutamate racemase
gi|112823639|gb|ABI25728.1| glutamate racemase [Haemophilus somnus 129PT]
Length = 267
Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 77/242 (31%), Positives = 126/242 (52%), Gaps = 4/242 (1%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+Q +IL FDSG+GGL V ++ + L+P+ H++Y D+ FPY ++ + R + +
Sbjct: 4 SIQPTILFFDSGVGGLSVYKETKQLLPDCHYLYCFDNGFFPYSEKDEKDIIDRTLRICQK 63
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
I Y L VIACNTA T++ ELR F S+ +G VPAIK AA +++ I +++T
Sbjct: 64 INQAYPLDLIVIACNTASTVVLPELRRNF-SIPIVGTVPAIKPAAEMSETKHIGLIATKG 122
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++RTY ++LI +Y C + + S L E+ G ++ + +K+E+ K
Sbjct: 123 TIKRTYVNDLIKNYAHHCMVEKIGSTKLVEIAEQKLRGGEVDLNVLKQELSPWQTM---K 179
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D +VL CTH+PLI P ++ + +IA+R + LL I +
Sbjct: 180 SLDSVVLGCTHFPLIKEEIECCLPQVKFFVSSGKAIAKRVKFLLKGIEVRSKIQKKNLIF 239
Query: 251 FL 252
Sbjct: 240 CT 241
>gi|322834972|ref|YP_004214999.1| glutamate racemase [Rahnella sp. Y9602]
gi|321170173|gb|ADW75872.1| glutamate racemase [Rahnella sp. Y9602]
Length = 293
Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats.
Identities = 80/266 (30%), Positives = 144/266 (54%), Gaps = 11/266 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++L+FDSG+GGL V ++R ++P+ H+IY D+V FPYG + + +R++ + + +
Sbjct: 26 RPTVLVFDSGVGGLSVYDEVRQMLPDLHYIYAFDNVAFPYGEKSEEFIVERVVEIVTAVA 85
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + VIACNTA T+ LR+ F S +G VPAIK AA T++G++ +L+T AT+
Sbjct: 86 KRHPLSIIVIACNTASTVSLPALRAKF-SCPVVGVVPAIKPAAKLTRNGVVGLLATRATV 144
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R YT +L+ + + C I ++ S L E G ++ +KK + + +
Sbjct: 145 QRPYTHDLVARFATDCQILMLGSAELVELAEAKLHGEEVSLAALKKILHPWL--RLREPP 202
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL-- 250
D +VL CTH+PL+ Q+ P +D+ +IARRA L+ + D +
Sbjct: 203 DTVVLGCTHFPLLSQELSQVLPDGTRMIDSGSAIARRAHWLIETSHVPIPERKADVEIEC 262
Query: 251 --FL---SGKPDIAMRRLMQGFGLKS 271
+ + + + ++Q +G +S
Sbjct: 263 VAYCMAMTAEAQSLL-PVLQAYGFRS 287
>gi|332345964|gb|AEE59298.1| glutamate racemase MurI [Escherichia coli UMNK88]
Length = 262
Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats.
Identities = 81/255 (31%), Positives = 137/255 (53%), Gaps = 6/255 (2%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y
Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S + E G + D +K+ + KE D +V
Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF--LSG 254
L CTH+PL+ Q+ P +D+ +IARR LL + A ++
Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTT 238
Query: 255 KPDIAMRRLMQGFGL 269
+ + + ++Q +G
Sbjct: 239 EAEQLL-PVLQRYGF 252
>gi|145297189|ref|YP_001140030.1| glutamate racemase [Aeromonas salmonicida subsp. salmonicida A449]
gi|142849961|gb|ABO88282.1| glutamate racemase [Aeromonas salmonicida subsp. salmonicida A449]
Length = 263
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 82/259 (31%), Positives = 135/259 (52%), Gaps = 8/259 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL+FDSG+GGL + +++R +P +++ Y D+ FPYG + AL L S ++ ++
Sbjct: 4 ILVFDSGMGGLTIYREIRRALPAHNYFYCFDNANFPYGELSESALIAACTRLVSHMVAEH 63
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L VIACNTA T+ LR+ ++ +G VPAIK AAA T++G I +L+TP T+ R
Sbjct: 64 VIDLVVIACNTASTIALPSLRAAL-TIPVVGVVPAIKPAAALTRNGCIGLLATPGTVSRE 122
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT +LI + + L + L E G + +++ + +R D +
Sbjct: 123 YTHHLIAQFAPGKRVLLKGATELVIEAEHKLAGRPVNMALLQEVLTDWME--GEERPDTL 180
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+PL+ RQL P +D+ ++ARR LL + ++ + + +
Sbjct: 181 VLGCTHFPLLNDEIRQLMP-GCQLVDSGSAVARRVAHLLATVAEQPSQAVVQARAYCT-R 238
Query: 256 PDIAMRRL---MQGFGLKS 271
D ++L +Q +GL S
Sbjct: 239 LDAQAQKLTAPLQAWGLSS 257
>gi|289163917|ref|YP_003454055.1| glutamate racemase [Legionella longbeachae NSW150]
gi|288857090|emb|CBJ10905.1| putative glutamate racemase [Legionella longbeachae NSW150]
Length = 273
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 61/261 (23%), Positives = 111/261 (42%), Gaps = 10/261 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
Q +I +FDSG+GGL VL+ +R +P+ F+Y+ D PYG +K+ M +
Sbjct: 5 TNQLAIGVFDSGMGGLTVLRALREGLPQESFVYLGDTARLPYGTKSPDTVKQYAMQ-MAK 63
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF-LGAVPAIKQAAAYTQSGLISILSTP 129
+L + + VIACNTA T L+S P M P A A T++ + +L+T
Sbjct: 64 LLVERRIKALVIACNTATTAALPYLQSMLPDMPVLGVVAPGAAAAVAATKNNHVIVLATE 123
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ LI + + I+ + +L + EE ++ + +K ++
Sbjct: 124 TTIASNAYQQLIAQQLPRAVINTRACSVLVALAEEGMINNQVAREALKYYLDDF------ 177
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDD 247
D ++L CTH+P+ + + P V +D++ + A LL + + ++
Sbjct: 178 THEDTVLLGCTHFPVFKSLLISILPEGVSIVDSAHATAIALYRLLEKQDLLNDVPSLYRR 237
Query: 248 HALFLSGKPDIAMRRLMQGFG 268
++ G
Sbjct: 238 VTYLVTDSIKRFQTVGEIFLG 258
>gi|212715492|ref|ZP_03323620.1| hypothetical protein BIFCAT_00389 [Bifidobacterium catenulatum DSM
16992]
gi|212661574|gb|EEB22149.1| hypothetical protein BIFCAT_00389 [Bifidobacterium catenulatum DSM
16992]
Length = 271
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 59/260 (22%), Positives = 100/260 (38%), Gaps = 7/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I +FDSG+GG+ V +++R MP +Y D PYG ++K +
Sbjct: 14 MTSTAPIGVFDSGLGGISVAREIRRDMPNERVLYFGDSANAPYGTKSPEQVRKLSDAIVK 73
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--S 127
+ + VIACNTA + +ELR + + +G PA+K A ++ +
Sbjct: 74 RFV-EQGVKAVVIACNTATSAAANELRDKY-DIPIIGMEPALKVACDRGHGNRQRVIVAA 131
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TP TLR + L+ + + I L VE D + + F +
Sbjct: 132 TPLTLRERKFAVLMDRFKTDHTIFPEPCPGLVEIVEHGQLD---DHDVVMHTLHQYFDQY 188
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+ D +VL CTH+ FR+L P +D ++ R +L + +
Sbjct: 189 DLSTIDSVVLGCTHFVFYRDYFRELLPDTAAIIDGNEGTVRHLGVVLESLGKLSPEDAEG 248
Query: 248 HALFLSGKPDIAMRRLMQGF 267
+ + +L Q
Sbjct: 249 GIELANSDTSAQIAQLAQSL 268
>gi|229830192|ref|ZP_04456261.1| hypothetical protein GCWU000342_02301 [Shuttleworthia satelles DSM
14600]
gi|229791490|gb|EEP27604.1| hypothetical protein GCWU000342_02301 [Shuttleworthia satelles DSM
14600]
Length = 258
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 63/256 (24%), Positives = 104/256 (40%), Gaps = 8/256 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GG+ VL+++ LMP F+Y D PYG E +++ + L
Sbjct: 6 NAPIAVFDSGMGGISVLRELVKLMPREDFLYFGDSKNAPYGTRELPEIQELTIRNI-QHL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ACNTA + +LR +P+ +G PA+K A G + +++TP T+
Sbjct: 65 MNRGCKAVAVACNTATSAAVRKLREMYPNFPIVGIEPAVKPACMENPGGKVLVMATPMTV 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R L + I +S L VE + + E+ +E
Sbjct: 125 RLGKLHLLCERFRHVAQIETLSCPGLMEFVE----EGRDQTPELMHFLEELLAPYRD--V 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHALF 251
D +VL CTHYP + ++L V D + AR + + +++
Sbjct: 179 DAVVLGCTHYPFVRKQVQELMGASVKIYDGAAGTARELLRRIRLEDLETESKELGSVIFE 238
Query: 252 LSGKPDIAMRRLMQGF 267
S + M R+ F
Sbjct: 239 NSDPTEERMERMRNLF 254
>gi|188587547|ref|YP_001919512.1| glutamate racemase [Clostridium botulinum E3 str. Alaska E43]
gi|229486234|sp|B2UX89|MURI_CLOBA RecName: Full=Glutamate racemase
gi|188497828|gb|ACD50964.1| glutamate racemase [Clostridium botulinum E3 str. Alaska E43]
Length = 258
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 65/258 (25%), Positives = 109/258 (42%), Gaps = 6/258 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K I FDSG+GGL V+++ LMP ++IY D PYG ++ F +
Sbjct: 3 KKNRPIGFFDSGVGGLSVMKEAIRLMPNENYIYFGDSKNAPYGIKTVEEVRTLT-FNAVE 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L + V+ACNTA + D +RS + ++ +G PA+K A Y + G I I++TP
Sbjct: 62 SLLEKNVKAIVVACNTATSAAIDLVRSKYKNIPIIGIEPALKLATKYNRKGNIIIMATPM 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TL+ +L+ Y I + L +E + E+ +K++ + +
Sbjct: 122 TLKEKKFKSLMEKYGENYDIVSLPCAKLVEFIEHGILSGEELEEYLKEKFKSY----KNN 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHA 249
V+VL CTHYP I ++ + +D ++ R L N T
Sbjct: 178 DIGVVVLGCTHYPFIKETLYKVIDKDIPIIDGGLGTSQELRRRLEEKNLLNTEDKKGSIT 237
Query: 250 LFLSGKPDIAMRRLMQGF 267
+ S + + +
Sbjct: 238 IINSNGSEKMIELSKKLI 255
>gi|212695391|ref|ZP_03303519.1| hypothetical protein BACDOR_04940 [Bacteroides dorei DSM 17855]
gi|237711572|ref|ZP_04542053.1| glutamate racemase [Bacteroides sp. 9_1_42FAA]
gi|265753000|ref|ZP_06088569.1| glutamate racemase [Bacteroides sp. 3_1_33FAA]
gi|212662026|gb|EEB22600.1| hypothetical protein BACDOR_04940 [Bacteroides dorei DSM 17855]
gi|229454267|gb|EEO59988.1| glutamate racemase [Bacteroides sp. 9_1_42FAA]
gi|263236186|gb|EEZ21681.1| glutamate racemase [Bacteroides sp. 3_1_33FAA]
Length = 281
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 62/270 (22%), Positives = 102/270 (37%), Gaps = 11/270 (4%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P I +FDSG GGL +L K+R LMPEY +IY+ D PYG + + +
Sbjct: 3 PSLPPSTGPIGVFDSGYGGLTILDKIRGLMPEYDYIYLGDSARCPYGPRSFEVVYEFTLQ 62
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLG------AVPAIKQAAAYTQS 120
S L + L ++ACNTA ++ + P + T+S
Sbjct: 63 AVSK-LFELGCPLVILACNTASAKALRTIQQINLPVIDATRRVLGVIRPTAECIGEITRS 121
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+ IL+T T++ IH + + + S VE + + +K+ I
Sbjct: 122 RHVGILATAGTIKSESYLLEIHKLSPDIVVTGEACPMWVSLVENNEYQSEGADYFVKQHI 181
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ D I+L CTHYPL++ RQ +P + + + +AR + L R
Sbjct: 182 NRLLD--KDPVIDTIILGCTHYPLLLDKIRQFTPGHIRIIAQGEYVARSLQDYLNRHPEM 239
Query: 241 --QTRVFDDHALFLSGKPDIAMRRLMQGFG 268
+ + + G
Sbjct: 240 DARCEKGGKCRFLTTESENKFEESASIFLG 269
>gi|114331729|ref|YP_747951.1| glutamate racemase [Nitrosomonas eutropha C91]
gi|114308743|gb|ABI59986.1| glutamate racemase [Nitrosomonas eutropha C91]
Length = 268
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 68/255 (26%), Positives = 115/255 (45%), Gaps = 7/255 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ IFDSGIGGL V +K+R L+P +YVAD + PYG D+ + +R M ++ L
Sbjct: 11 PVGIFDSGIGGLSVARKIRELLPSEDMVYVADSLHAPYGEKSDNYIFQR-MGAVTEFLLA 69
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ V+ACNTA T LR+ +P + +G P IK AA T +G+I +L+TP TL+
Sbjct: 70 RKAKAVVVACNTATTAAISRLRACYP-IPIVGVEPGIKPAALSTHTGVIGVLATPRTLQT 128
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ L + I + L +++E + D+ ++ K D
Sbjct: 129 NSFTALAERFARNVRIEIQPCPDLVTKIE----ALNFNSDQTIALLKQYISPLLDKGADT 184
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALFLS 253
IVL CTHY + + +++ + + ++A+ L + S
Sbjct: 185 IVLGCTHYNHLSELISKVAGENISIIKTDAAVAKEVARRLSSGGLLAGGDHAGSEEFWTS 244
Query: 254 GKPDIAMRRLMQGFG 268
G +++ +G
Sbjct: 245 GPLAAYHQQIELLWG 259
>gi|120600465|ref|YP_965039.1| glutamate racemase [Shewanella sp. W3-18-1]
gi|146294593|ref|YP_001185017.1| glutamate racemase [Shewanella putrefaciens CN-32]
gi|120560558|gb|ABM26485.1| glutamate racemase [Shewanella sp. W3-18-1]
gi|145566283|gb|ABP77218.1| glutamate racemase [Shewanella putrefaciens CN-32]
Length = 268
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 78/265 (29%), Positives = 124/265 (46%), Gaps = 10/265 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL ++R L+P+ + Y+ D+ PYG E+ L + L ++
Sbjct: 1 MSRPILVFDSGIGGLSVLAEIRKLLPQKEYCYLFDNARLPYGELEEQVLISGCVTLIEEL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + V+ACNTA TL+ LR S+ +G VPAIK AA ++S I +L+TP T
Sbjct: 61 AIRIDAAIVVVACNTASTLVLPALREKL-SIPIVGVVPAIKPAALMSKSKRIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+RR YT LI + CH+ L L E+ + + +
Sbjct: 120 VRRHYTHKLISQFADGCHVELFGCSELVMMAEQKVATGILN----IERLARILAPVVAAD 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQTRVFDD--- 247
DV+VL CTH+P+I + + + V LD+ ++IA+R LL +
Sbjct: 176 LDVLVLGCTHFPMIRNELQLVLGAGVTLLDSGEAIAKRVVALLAQESGVLDNKTMGSKAS 235
Query: 248 -HALFLSGKPDIAMRRLMQGFGLKS 271
A + + + + G +
Sbjct: 236 MSAYYTKAEISEGLSSTLADCGFSA 260
>gi|218710895|ref|YP_002418516.1| glutamate racemase [Vibrio splendidus LGP32]
gi|218323914|emb|CAV20275.1| glutamate racemase [Vibrio splendidus LGP32]
Length = 276
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 82/266 (30%), Positives = 139/266 (52%), Gaps = 11/266 (4%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ +Q +ILIFDSG+GGL V +++ L+P +++ YV D+ +PYG + L R+ +
Sbjct: 11 VSESIQKNILIFDSGVGGLSVYKEISQLLPNHNYTYVFDNEAYPYGELDQQVLIHRVQSI 70
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ + + + VIACNTA T++ LR+ P + +G VPAIK A+ + + +++
Sbjct: 71 VASFVASHAIDIVVIACNTASTIVLPTLRANNP-IPIVGVVPAIKPASLL-ANKAVGLIA 128
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TPAT+ R YT LI ++ S + L+ S L E+ G I +E+++ ++
Sbjct: 129 TPATITREYTHELIKNFSSNKRVELLGSTQLVDMAEDKLRGEAINLEELRQILQPMI--- 185
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
DV VL CTH+PLI +Q+ V +D+ +IA+R + LL + T
Sbjct: 186 --NTIDVAVLGCTHFPLIKSEIQQVLGKNVMLIDSGKAIAKRVQDLLDLES--STEEGGV 241
Query: 248 HALFLSGKP--DIAMRRLMQGFGLKS 271
F S P + A+ +++ G S
Sbjct: 242 REAFCSALPKKESALNSMLKQLGFSS 267
>gi|218296251|ref|ZP_03497007.1| glutamate racemase [Thermus aquaticus Y51MC23]
gi|218243323|gb|EED09853.1| glutamate racemase [Thermus aquaticus Y51MC23]
Length = 257
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 55/262 (20%), Positives = 104/262 (39%), Gaps = 17/262 (6%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ + I +FDSG+GGL VL ++ +P+ F+Y D PYG+ +++ +
Sbjct: 1 MRNPKAPIGVFDSGVGGLTVLTALKKALPQEDFLYFGDTARVPYGSKPLSVVRRFAWEIA 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+L + V+ACNTA + +L F PA + A Y + + ++ T
Sbjct: 61 GFLLRE-GVKAIVVACNTASSAALPDLAEDLSVPVFGVLEPAAQVAQGYRK---VGLIGT 116
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ + + + VEE + + +E +
Sbjct: 117 QATVGSRAYERYVDLS------WAKACPLFVPLVEEGLWDDPVALLIARHYLEEAPEDL- 169
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
+ ++L CTHYP + Q+ P V +D++++ A R L
Sbjct: 170 ----EALILGCTHYPYLKRTIAQVLP-GVKLIDSAEATAGRVAEALAAEGLLNPEGRGQV 224
Query: 249 ALFLSGKPDIAMRRLMQGFGLK 270
+++G P+ R L + G++
Sbjct: 225 VHYVTGDPESY-RALAERLGVR 245
>gi|188994603|ref|YP_001928855.1| glutamate racemase [Porphyromonas gingivalis ATCC 33277]
gi|188594283|dbj|BAG33258.1| glutamate racemase [Porphyromonas gingivalis ATCC 33277]
Length = 274
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 58/265 (21%), Positives = 104/265 (39%), Gaps = 12/265 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +SI IFDSG GGL +L ++R LMPEY+F+Y+ D+ PYGN + K +
Sbjct: 1 MNSSIGIFDSGYGGLTILSEIRRLMPEYNFVYLGDNARSPYGNRSYEVVYKFTLQAVRK- 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELR-------STFPSMAFLGAVPAIKQAAAYTQSGLIS 124
L + L ++ACNTA ++ P ++ T++ +
Sbjct: 60 LFELGCPLVILACNTASAKALRTIQQRDLPNMEDPTRRVLGIIRPTVEAVDEITRTKHVG 119
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+L+T T+ I + + + + VE + I+K ++
Sbjct: 120 VLATQGTVSSHSYQLEIAKLFPEISVTEEACPMWVPLVETGESDSPGADYFIRKHLDSII 179
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QT 242
+ D I+LACTHYPL+ ++L + + + +A + L R +
Sbjct: 180 A--KDDTIDTIILACTHYPLLRPKMKRLLTPTIKLIAQGELVAHSLKDYLSRHPEMDRRI 237
Query: 243 RVFDDHALFLSGKPDIAMRRLMQGF 267
+ + + PD
Sbjct: 238 EKGGKTSYYTTESPDKFGELASLFL 262
>gi|329956144|ref|ZP_08296867.1| glutamate racemase [Bacteroides clarus YIT 12056]
gi|328524730|gb|EGF51788.1| glutamate racemase [Bacteroides clarus YIT 12056]
Length = 279
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 57/261 (21%), Positives = 106/261 (40%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L K+R +PEY ++Y+ D+ PYG + + + + L +
Sbjct: 11 PIGVFDSGYGGLTILSKIREALPEYDYVYLGDNARAPYGTRSFEVVYEFTLQAVTK-LFE 69
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ACNTA + ++L P+ LG + P ++ T+S + +L+T
Sbjct: 70 MGCHLVILACNTASAKALRSIQINDLPHLDPARRVLGVIRPTVECIGNITRSRHVGVLAT 129
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ IH + + + S VE + I+K I +
Sbjct: 130 GGTIKSESYPLEIHKLFPDIKVSGEACPLWVSLVENNEAQGDGTDYFIRKYINELLA--K 187
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFD 246
+ D +L CTHYP+++ RQ P + + +A + L R +
Sbjct: 188 DREIDTAILGCTHYPILLPKIRQYMPDGITIVSQGKLVADSLKDYLRRHPEIDAKCTQGG 247
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ + + + +
Sbjct: 248 ECTYYTTEAEEKFVESASIFL 268
>gi|157377467|ref|YP_001476067.1| glutamate racemase [Shewanella sediminis HAW-EB3]
gi|157319841|gb|ABV38939.1| Glutamate racemase [Shewanella sediminis HAW-EB3]
Length = 282
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 17/274 (6%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ L IL+FDSGIGGL + ++R ++P+ + Y+ D+ PYG ++ L L +
Sbjct: 7 RDLSGPILVFDSGIGGLSIFDEIRQVLPDKQYCYLFDNARLPYGELDEQVLISGCKALIT 66
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
I+ L VIACNTA TL+ LR ++ +G VPAIK AAA +++ I +L+TP
Sbjct: 67 SIVKMIDASLIVIACNTASTLVLPALREVL-NIPVVGVVPAIKPAAALSRNKHIGVLATP 125
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+RR YT LI + C + L S L E A GI D I+ +I +
Sbjct: 126 GTIRRPYTHELIEQFGGDCKVELYGSSELVILSERKAAGI----DIIQADIAKILNPIKC 181
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL---LPRINTHQTRVFD 246
D +VL CTH+P++ + V LD++ ++A R L L N ++ D
Sbjct: 182 SGLDTLVLGCTHFPMLKVEIQDYLGENVLLLDSAKAVAARVISLCLQLDEKNRNRNNSKD 241
Query: 247 DH---------ALFLSGKPDIAMRRLMQGFGLKS 271
+ AL+ S + ++ + G +
Sbjct: 242 EVSGSESKEMIALYTSEEISDGLKNTLAKIGFSN 275
>gi|160872350|ref|ZP_02062482.1| glutamate racemase [Rickettsiella grylli]
gi|159121149|gb|EDP46487.1| glutamate racemase [Rickettsiella grylli]
Length = 271
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 59/259 (22%), Positives = 97/259 (37%), Gaps = 9/259 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + L+P IY D P+G+ A++ + + +L
Sbjct: 5 SQPIGIFDSGMGGLTVAHAVTKLLPNESIIYFGDTAHAPWGDKSAAAIQAYSIKICD-ML 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
K L +IACN+A + + ++ M P I A Y I ++ T
Sbjct: 64 IKQNCKLILIACNSASAVAYELVKEYLGHKRMVVDVIDPMIDHLARYYVDKTIGLIGTKQ 123
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + ++ +++ +L +EE I D IK E +
Sbjct: 124 TINSNIYKKKLDELGINIQLNTLATPLLVPLIEEGFMDQTIMSDAIKT----YLKESSLR 179
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFDDH 248
D +VL CTHYPLI ++ +D++D +A + L T
Sbjct: 180 NLDALVLGCTHYPLIKQQIKRFYGDSTTIVDSTDIVAEAVKSRLKERKLLAVSTNGGPKK 239
Query: 249 ALFLSGKPDIAMRRLMQGF 267
++S F
Sbjct: 240 RFYVSDYTPAFSALASLFF 258
>gi|270157815|ref|ZP_06186472.1| glutamate racemase [Legionella longbeachae D-4968]
gi|269989840|gb|EEZ96094.1| glutamate racemase [Legionella longbeachae D-4968]
Length = 271
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 62/261 (23%), Positives = 112/261 (42%), Gaps = 10/261 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
Q +I +FDSG+GGL VL+ +R +P+ F+Y+ D PYG +K+ M +
Sbjct: 3 TNQLAIGVFDSGMGGLTVLRALREGLPQESFVYLGDTARLPYGTKSPDTVKQYAMQ-MAK 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF-LGAVPAIKQAAAYTQSGLISILSTP 129
+L + + VIACNTA T L+S P M P A A T++ + +L+T
Sbjct: 62 LLVERRIKALVIACNTATTAALPYLQSMLPDMPVLGVVAPGAAAAVAATKNNQVIVLATE 121
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ LI + + I+ + +L + EE ++ + +K ++G
Sbjct: 122 TTIASNAYQQLIAQQLPRAVINTRACSVLVALAEEGMVNNQVAREALKYYLDGF------ 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDD 247
D ++L CTH+P+ + + P V +D++ + A LL + + ++
Sbjct: 176 THEDTVLLGCTHFPVFKSLLISILPEGVSIVDSAHATAIALYRLLEKQDLLNDVPSLYRR 235
Query: 248 HALFLSGKPDIAMRRLMQGFG 268
++ G
Sbjct: 236 VTYLVTDSIKRFQTVGEIFLG 256
>gi|55981612|ref|YP_144909.1| glutamate racemase [Thermus thermophilus HB8]
gi|81600355|sp|Q5SHT7|MURI_THET8 RecName: Full=Glutamate racemase
gi|55773025|dbj|BAD71466.1| glutamate racemase [Thermus thermophilus HB8]
Length = 257
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 99/260 (38%), Gaps = 17/260 (6%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K + I +FDSG+GGL VL+ +R L+P F+Y D PYG +++ +
Sbjct: 1 MKDPKAPIGVFDSGVGGLTVLKALRRLLPREEFLYFGDTARVPYGGKPLAMVRRFAWEIA 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
L + V+ACNTA + +L F PA + A + + + ++ T
Sbjct: 61 G-FLLRQGVKAIVVACNTASSAALPDLAEDLSVPVFGVVEPAARAARGFRK---VGLIGT 116
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ + + + VEE + + +E
Sbjct: 117 QATVESGAYPRYVDLA------WAKACPLFVPLVEEGLWDDPVALLVARHYLEDA----- 165
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
K + ++L CTHYP + + P V LD+++ A+ L
Sbjct: 166 PKDLEALILGCTHYPFLKGAIGAVLP-GVALLDSAELTAQEVARALEAEGLLNPEGRGRT 224
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
++G P+ A R L + G
Sbjct: 225 FHLVTGDPE-AYRALAERLG 243
>gi|256820188|ref|YP_003141467.1| glutamate racemase [Capnocytophaga ochracea DSM 7271]
gi|256581771|gb|ACU92906.1| glutamate racemase [Capnocytophaga ochracea DSM 7271]
Length = 269
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 58/253 (22%), Positives = 112/253 (44%), Gaps = 9/253 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG + +++ LMP + +++AD+ PYG + + L +
Sbjct: 10 PIGLFDSGVGGTTIWKEVNALMPNENTLFIADNKNAPYGEKTKEEIIALCDAN-TRFLLE 68
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ V+ACNT T LR+ + + F+G PAIK A+ + + I +L+T +TL
Sbjct: 69 NNAKIIVVACNTGTTNAISYLRNKYKEVPFIGIEPAIKPASLQSVTKKIGVLATRSTLAS 128
Query: 135 TYTSNLIHSYVSQCHI--HLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + L +E +IK E+ + + +
Sbjct: 129 DLFAKTSEHLKQEEQVEIIEQVGEGLVDLIE----AGRIKSPEMTLLLRKYLLPMIAEGI 184
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFDDHAL 250
D +VL CTHYP ++ ++L P + +D+ ++A++ R +L + + H
Sbjct: 185 DYLVLGCTHYPYLLPQIQELIPPHIKVIDSGYAVAKQTRNILSQHHLLNDDATAEPQHLW 244
Query: 251 FLSGKPDIAMRRL 263
+GK ++ +
Sbjct: 245 LANGKVEVLQQFA 257
>gi|225023363|ref|ZP_03712555.1| hypothetical protein EIKCOROL_00221 [Eikenella corrodens ATCC
23834]
gi|224943841|gb|EEG25050.1| hypothetical protein EIKCOROL_00221 [Eikenella corrodens ATCC
23834]
Length = 271
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 60/260 (23%), Positives = 107/260 (41%), Gaps = 8/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL V++ + +P + +Y D PYG ++ + L
Sbjct: 8 QRPIGVFDSGVGGLTVVRALMERLPNENIVYFGDTARVPYGVKSRSTIETYTAQIVE-FL 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT-QSGLISILSTPAT 131
++ VIACNT + ++R T M L + A QAA T ++G I I++T T
Sbjct: 67 MQHDVKALVIACNTIAAVAGAKVRQTAGGMPVLDVIAAGAQAALATSRNGRIGIIATSTT 126
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH+ Q + + +L VE ++ + + + +
Sbjct: 127 VNSNAYARAIHAQNPQARVPSQACPLLVPLVE----EGWLEHEVTRLTVREYLKPLLAED 182
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHAL 250
D +VL CTHYPL+ + + +P + +D++ + A L D+
Sbjct: 183 IDTLVLGCTHYPLLKPLLQSEAP-HLALVDSALTTAEATAAALAEAGLLNPSQTPADYHF 241
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
++S P + G
Sbjct: 242 YVSDIPLRFQTIGERFLGRS 261
>gi|224025256|ref|ZP_03643622.1| hypothetical protein BACCOPRO_01993 [Bacteroides coprophilus DSM
18228]
gi|224018492|gb|EEF76490.1| hypothetical protein BACCOPRO_01993 [Bacteroides coprophilus DSM
18228]
Length = 280
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 59/263 (22%), Positives = 107/263 (40%), Gaps = 11/263 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +FDSG GGL +L K+R LMP +IY+ D+ PYG + + + L
Sbjct: 9 SGPVGVFDSGYGGLTILAKIRELMPHNDYIYLGDNARTPYGTRSFEVVYEFTLQAVRK-L 67
Query: 73 DKYQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126
+ L ++ACNTA + +++L P+ LG + P ++ A T + + +L
Sbjct: 68 FELGCPLVILACNTASAKALRSIQQNDLPYLDPTRRVLGVIRPTVESIGALTATRHVGVL 127
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+TP T+ IH + + + VE + + ++K I+G +
Sbjct: 128 ATPGTILSESYPLEIHKLFPDVQVTGMPCPMWVPLVENNEFASEGADYFVRKYIDGLLSQ 187
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--V 244
D ++L CTHYPL++ R+ +P + + + +AR + L R +R
Sbjct: 188 --DPEIDTLILGCTHYPLLLDKIRRFTPSHIRLVAQGEYVARSLKDYLSRHTEMNSRCTC 245
Query: 245 FDDHALFLSGKPDIAMRRLMQGF 267
+
Sbjct: 246 NGHCEFLTTESVSKFRESASVFL 268
>gi|299142407|ref|ZP_07035539.1| glutamate racemase [Prevotella oris C735]
gi|298576129|gb|EFI48003.1| glutamate racemase [Prevotella oris C735]
Length = 278
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 57/261 (21%), Positives = 102/261 (39%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L +R L+P+Y +IY+ D+ PYG + + L +
Sbjct: 10 PIGVFDSGYGGLTILHGIRQLLPQYDYIYLGDNARAPYGTRSFDVVYQFTRQAVMK-LFE 68
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ CNTA + +++L + PS LG + P + T++ + +L+T
Sbjct: 69 LGCHLVILGCNTASAKALRSIQRNDLPNLDPSRRVLGVIRPTAEIIGTLTKNNHVGLLAT 128
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ I + + V+ VE + +KK I+ +
Sbjct: 129 EGTVKSHSYDLEIKKLWPEIKVTGVACPFWVPLVEYNEADSPGADYFVKKRIDELMLH-- 186
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRVFD 246
D I+L CTHYP+++ + V + + +A + L R HQ
Sbjct: 187 DPDIDTIILGCTHYPILMPKIVKYVRPGVRIVPQGEYVAGSLQDYLRRHTDMEHQLTQGG 246
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ P+
Sbjct: 247 SCRYLTTENPERFKESAQIFL 267
>gi|296105345|ref|YP_003615491.1| glutamate racemase [Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|295059804|gb|ADF64542.1| glutamate racemase [Enterobacter cloacae subsp. cloacae ATCC 13047]
Length = 260
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 80/257 (31%), Positives = 138/257 (53%), Gaps = 6/257 (2%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEDFIVERVVEIVTAVQQRYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+VIACNTA T+ LR+ F +G VPAIK AA T +G++ +L+T T++R Y
Sbjct: 62 LALAVIACNTASTVSLPALRAKF-QFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRPY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S L E G + +E+++ + E D +V
Sbjct: 121 TRELIDRFANECQIAMLGSAELVEMAEAKLHGKTVPLEELRRILRPWLRMPEPP--DTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF--LSG 254
L CTH+PL+ ++ P +D+ +IARR LL + A L+
Sbjct: 179 LGCTHFPLLQEELLEVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMALTN 238
Query: 255 KPDIAMRRLMQGFGLKS 271
+ + + +++ +G ++
Sbjct: 239 ETEQLL-PVLRRYGFET 254
>gi|225351503|ref|ZP_03742526.1| hypothetical protein BIFPSEUDO_03099 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225157847|gb|EEG71130.1| hypothetical protein BIFPSEUDO_03099 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 271
Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats.
Identities = 60/260 (23%), Positives = 100/260 (38%), Gaps = 7/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I +FDSG+GG+ V +++R MP +Y D PYG ++K +
Sbjct: 14 MTSTAPIGVFDSGLGGISVAREIRRDMPNERVLYFGDSANAPYGTKSPEQVRKLSDAIVK 73
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--S 127
+ + VIACNTA + +ELR + + +G PA+K A ++ +
Sbjct: 74 RFV-EQGVKAVVIACNTATSAAANELRDKY-DIPIIGMEPALKVACDRGHGNRQRVIVAA 131
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TP TLR + L+ + + I L VE D + + F +
Sbjct: 132 TPLTLRERKFAVLMDRFKTDHTIFPEPCPGLVEIVEHGQLD---DHDVVMHTLHQYFDQY 188
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+ D +VL CTH+ FR+L P +D ++ R +L + D
Sbjct: 189 DLSTIDSVVLGCTHFVFYRDYFRELLPDTAAIIDGNEGTVRHLGVVLESLGKLSPEDADG 248
Query: 248 HALFLSGKPDIAMRRLMQGF 267
+ + +L Q
Sbjct: 249 GIELANSDTSTQIAQLAQSL 268
>gi|261854703|ref|YP_003261986.1| glutamate racemase [Halothiobacillus neapolitanus c2]
gi|261835172|gb|ACX94939.1| glutamate racemase [Halothiobacillus neapolitanus c2]
Length = 286
Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats.
Identities = 69/254 (27%), Positives = 106/254 (41%), Gaps = 7/254 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL V Q +R +P IY+AD PYG+ + +R + +D L
Sbjct: 11 PIGIFDSGVGGLSVYQAVRHALPAEDIIYIADSGFAPYGDRSSDFITERAVA-MTDFLIA 69
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA + +LR F S+ + PAIK A ++QSG I +L+T T+
Sbjct: 70 AGAKAVVVACNTATVIAVTQLRRQF-SIPIIALEPAIKPAIEHSQSGTIGVLATRKTIES 128
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
L ++ + L +VE D I++ +E D
Sbjct: 129 PAVERLCRTHGVNTRVLLQPCPGFVEQVERGEMDHPDTTDLIRRYVE----PLLAAGADT 184
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALFLS 253
+VL CTHY + R + V LD+S ++AR+ + + F +
Sbjct: 185 LVLGCTHYVYLAQQIRTIVGPDVSILDSSAAVARQVGRRIGSSEVAASTGRCGQDQFFTT 244
Query: 254 GKPDIAMRRLMQGF 267
R +M
Sbjct: 245 AASTDHARAVMSTL 258
>gi|212633112|ref|YP_002309637.1| glutamate racemase [Shewanella piezotolerans WP3]
gi|226722989|sp|B8CH57|MURI_SHEPW RecName: Full=Glutamate racemase
gi|212554596|gb|ACJ27050.1| Glutamate racemase [Shewanella piezotolerans WP3]
Length = 268
Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats.
Identities = 76/263 (28%), Positives = 122/263 (46%), Gaps = 8/263 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ ILIFDSGIGGL +L ++R +MP+ Y+ D+ PYG E+ L + L +
Sbjct: 1 MSGPILIFDSGIGGLSILDEIRKVMPQQSCCYLFDNARLPYGELEESELISGCVSLIIEQ 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + V+ACN+A TL+ LR S+ +G VPAIK AA ++ I +L+TP T
Sbjct: 61 AMRINAGIVVVACNSASTLVLTTLREQL-SIPVVGVVPAIKPAAKISKRRHIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R YT LI ++ C + L S L E G + +++E
Sbjct: 120 IKRPYTKQLIDAFAEDCRVELFGSSELVMLAEAKLAGTAVD----MQKLELLLAPIRTSE 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL- 250
D +VL CTH+P++ +Q + LD+ ++A R LL +T
Sbjct: 176 LDTLVLGCTHFPVLATEIKQSLGQSIILLDSGKAVADRVLSLLKGNGLPKTASNKVVDYS 235
Query: 251 --FLSGKPDIAMRRLMQGFGLKS 271
F + +++ + G S
Sbjct: 236 AVFTTDDIAQGLKKRLVEEGFTS 258
>gi|283782931|ref|YP_003373685.1| glutamate racemase [Gardnerella vaginalis 409-05]
gi|283441996|gb|ADB14462.1| glutamate racemase [Gardnerella vaginalis 409-05]
Length = 256
Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats.
Identities = 59/260 (22%), Positives = 105/260 (40%), Gaps = 7/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+I +FDSG+GG+ V +++ +P IY D PYG +KK +
Sbjct: 1 MASSAAIGVFDSGLGGISVARQLHAALPHERIIYFGDSANAPYGIKTPEEVKKLSFAIVE 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--S 127
+ VIACNTA + ++LR+ + ++ +G PA+K A + ++ +
Sbjct: 61 HFVRL-NVKAVVIACNTATSAAVNDLRAHY-NIPIIGMEPALKLACDLGKGEPQRVIVAA 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TP TLR ++L+ + I L VE D + + F E
Sbjct: 119 TPLTLRERKFADLLQRFSQNNTIFSQPCPDLVRIVERGELN---NRDVVFAALHKYFDEY 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+ D +VL CTH+ FR+ P + +D ++ R +L N + +
Sbjct: 176 DLDSIDSVVLGCTHFVFYRDYFREFLPARTNIVDGNEGTINHLRKILELNNELASDSQEG 235
Query: 248 HALFLSGKPDIAMRRLMQGF 267
+ + M++L +
Sbjct: 236 SITLTNSDTSLRMQQLAKSL 255
>gi|284037266|ref|YP_003387196.1| glutamate racemase [Spirosoma linguale DSM 74]
gi|283816559|gb|ADB38397.1| glutamate racemase [Spirosoma linguale DSM 74]
Length = 280
Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats.
Identities = 54/269 (20%), Positives = 100/269 (37%), Gaps = 16/269 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG GGL VL+++ +P+Y +IY+ D+ PYG + + L
Sbjct: 5 SQPIGVFDSGYGGLTVLREIVKKLPQYDYIYLGDNARTPYGTRSFDTVYHYTLECV-QHL 63
Query: 73 DKYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLG------AVPAIKQAAAYTQSG 121
L ++ACNTA +L + +P + P + Y+++G
Sbjct: 64 FDRGCRLVILACNTASAKALRNIQQLDLPAQYPGLDGPDRRVLGVIRPTTEVIGTYSKTG 123
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ +L+T T+ I + + + + VE + +K+ I+
Sbjct: 124 KVGVLATRGTVTSESYRVEIEKFFPGLGVFQEACPMWVPLVENGEYDSPGADYFVKQHID 183
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH- 240
+ D ++LACTHYPL++ + +P L ++ L R
Sbjct: 184 RLLAQ--SPDIDTLLLACTHYPLLLEKIKHFAPSGATILSQGGIVSDSLADYLVRHPEIE 241
Query: 241 -QTRVFDDHALFLSGKPDIAMRRLMQGFG 268
Q + + R+ +G
Sbjct: 242 AQCSKHGQRTFLTTDATEDFDRQATIFYG 270
>gi|222035687|emb|CAP78432.1| glutamate racemase [Escherichia coli LF82]
Length = 260
Score = 213 bits (542), Expect = 3e-53, Method: Composition-based stats.
Identities = 81/255 (31%), Positives = 138/255 (54%), Gaps = 4/255 (1%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 1 MFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFIVERVVEIVTAVQERYPL 60
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+YT
Sbjct: 61 ALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSYT 119
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
LI + ++C I ++ S + E G + D +K+ + KE D +VL
Sbjct: 120 HELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTVVL 177
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257
CTH+PL+ Q+ P +D+ +IARR LL + A ++ P+
Sbjct: 178 GCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTPE 237
Query: 258 -IAMRRLMQGFGLKS 271
+ ++Q +G ++
Sbjct: 238 AEQLLPVLQRYGFET 252
>gi|145630715|ref|ZP_01786494.1| glutamate racemase [Haemophilus influenzae R3021]
gi|144983841|gb|EDJ91291.1| glutamate racemase [Haemophilus influenzae R3021]
Length = 269
Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats.
Identities = 76/263 (28%), Positives = 130/263 (49%), Gaps = 5/263 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K+ + ++L FDSG+GG V ++ + L+P +H++Y D+ GFPY E+ ++ R +
Sbjct: 4 KEKRPTVLFFDSGVGGFSVYREAKKLLPNWHYLYCFDNAGFPYSECEEESIIHRTLAACQ 63
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T
Sbjct: 64 LINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLATK 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++R Y LI + C + + + L E+ G + +K E+
Sbjct: 123 GTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPWAGM--- 179
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D +VL CTH+PLI + P ++D S +IA+R + LL N +
Sbjct: 180 ADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQVQNEKYNQM 239
Query: 250 LFLSGKPDI-AMRRLMQGFGLKS 271
+ P+ ++ + +G +S
Sbjct: 240 FCTAHFPEESQFKKALHLWGFES 262
>gi|303256754|ref|ZP_07342768.1| glutamate racemase [Burkholderiales bacterium 1_1_47]
gi|330999103|ref|ZP_08322824.1| glutamate racemase [Parasutterella excrementihominis YIT 11859]
gi|302860245|gb|EFL83322.1| glutamate racemase [Burkholderiales bacterium 1_1_47]
gi|329575492|gb|EGG57031.1| glutamate racemase [Parasutterella excrementihominis YIT 11859]
Length = 265
Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats.
Identities = 63/251 (25%), Positives = 113/251 (45%), Gaps = 7/251 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V+ +R +P IY D + PYG+ +K+R + + L
Sbjct: 1 MFDSGLGGLSVMHAVRDALPGEDIIYYGDCLYAPYGDRNSEYIKERCLAI-GRFLISKGA 59
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
V++CNTA + +R TF + +G PAIK AAA T++G++ +++T T+
Sbjct: 60 KAIVVSCNTATAEGVNTMRDTF-DIPIIGIEPAIKPAAAATKTGVVGVIATTRTITSERY 118
Query: 138 SNLIHSYV-SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
L+ + ++ + V L VE + +K IE + D +V
Sbjct: 119 LRLVREFAGTKVKVVSVPCPGLMECVESGDWDSF----KTQKLIEKYLHPIKRAGADKLV 174
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTHYP + +V ++ + +D S ++AR + L + ++SG
Sbjct: 175 LGCTHYPFLSNVLKRELGSGTELIDPSAAVARELKHQLSKRGLLSDGAKGKEVFYISGDA 234
Query: 257 DIAMRRLMQGF 267
+ + + +
Sbjct: 235 EKHRAVIERLW 245
>gi|289549102|ref|YP_003474090.1| glutamate racemase [Thermocrinis albus DSM 14484]
gi|289182719|gb|ADC89963.1| glutamate racemase [Thermocrinis albus DSM 14484]
Length = 255
Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats.
Identities = 58/241 (24%), Positives = 100/241 (41%), Gaps = 14/241 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSGIGGL VL+ +R P+ +Y+ D PYG+ +++ + ++ L
Sbjct: 2 KIGVFDSGIGGLTVLKAIRERYPKVDLLYLGDTARVPYGSKSKETVQRYSIE-CAEFLLG 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ L V+ACNTA D LR P F P +++A SG + ++ T T+
Sbjct: 61 HDVDLVVVACNTASAYALDLLRERLPVEVFGVIEPGVEEALRVCTSGKVGVIGTRGTISS 120
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
NL+ + + + VEE + E +E + + D
Sbjct: 121 GAYQNLLQKKGV--KVLAKACPLFVPLVEEGMVRGPVAEL----LVEHYLKDLKESGIDT 174
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
++L CTHYPL+ V + V +D++ + AR + +L+ +
Sbjct: 175 LILGCTHYPLLKDVIQAYMDGTV-IVDSAHATARWIERYVK------DEGNSSLSLYFTD 227
Query: 255 K 255
Sbjct: 228 D 228
>gi|269961492|ref|ZP_06175855.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269833721|gb|EEZ87817.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 268
Score = 212 bits (541), Expect = 4e-53, Method: Composition-based stats.
Identities = 82/260 (31%), Positives = 133/260 (51%), Gaps = 9/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L+FDSG+GGL V Q++ L+P ++Y+ D+ +PYG + L R+ L + ++
Sbjct: 6 KKKVLVFDSGVGGLSVFQEIHRLLPHMDYLYLFDNEAYPYGELDQDVLITRVNKLVAALV 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+++Q + VIACNTA T++ LR+ S+ +G VPAIK A+ S + +++TPAT+
Sbjct: 66 EEHQADIVVIACNTASTIVLPSLRANL-SIPVVGVVPAIKPASLL-ASQGVGLIATPATV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R YT LI + + L+ S L EE G I E +E + K
Sbjct: 124 TRQYTHELIRDFAQGKPVELLGSTRLVDMAEEKLRGESISLPE----LESILLPLRNK-V 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
DV VL CTH+PLI Q V +D+ ++IARR + LL +++ ++
Sbjct: 179 DVAVLGCTHFPLIKDEIHQALGGEVTLVDSGEAIARRVKALLTSDMKEESKEEGSKKIYA 238
Query: 253 SGKP--DIAMRRLMQGFGLK 270
S P + A+ + G
Sbjct: 239 SAPPWQEDALNTCLANLGFN 258
>gi|94969536|ref|YP_591584.1| glutamate racemase [Candidatus Koribacter versatilis Ellin345]
gi|166231022|sp|Q1INP0|MURI_ACIBL RecName: Full=Glutamate racemase
gi|94551586|gb|ABF41510.1| glutamate racemase [Candidatus Koribacter versatilis Ellin345]
Length = 291
Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats.
Identities = 63/282 (22%), Positives = 112/282 (39%), Gaps = 26/282 (9%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ + I +FDSG GGL VL+++ L+P ++Y D PYG + + +
Sbjct: 1 MSRQRPVIGVFDSGFGGLTVLREIVRLVPNAEYLYFGDTARLPYGTKSADTVARYALGAC 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
L+ VIACNTA L D + + A P AAA +++ ++++ T
Sbjct: 61 -HFLEGQGAEHLVIACNTATALAMDAIEAKANVPAIGVVEPGASAAAAISKTRSVAVIGT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ + + + ++ +L VEE + + + ++ F+ +
Sbjct: 120 EATISSHAYHHALERLGINA--YEKATPLLVPLVEEGWTDHPVTKQVAEIYLQDAFV-RR 176
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-------------- 234
+R+DV+VL CTHYPLI + R++ P V +D+++S A+ L
Sbjct: 177 EQRSDVLVLGCTHYPLIRPLLRKVVPSDVAIVDSAESTAKALAKKLGIAPPSASAAGATQ 236
Query: 235 --------PRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268
D F++ R G
Sbjct: 237 AAGARAQMAPSAPEPKEGTPDFRFFVTDSVQKFRRLGSGFLG 278
>gi|26250744|ref|NP_756784.1| glutamate racemase [Escherichia coli CFT073]
gi|26111175|gb|AAN83358.1|AE016770_158 Glutamate racemase [Escherichia coli CFT073]
Length = 285
Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats.
Identities = 81/259 (31%), Positives = 140/259 (54%), Gaps = 4/259 (1%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
++L+FDSG+G L V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +
Sbjct: 22 PTVLVFDSGVGXLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEVFIVERVVEIVTAVQE 81
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++
Sbjct: 82 RYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVK 140
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R+YT LI + ++C I ++ S + E G + D +K+ + KE D
Sbjct: 141 RSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--D 198
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTH+PL+ Q+ P +D+ +IARR LL + A ++
Sbjct: 199 TVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMA 258
Query: 254 GKPD-IAMRRLMQGFGLKS 271
P+ + ++Q +G ++
Sbjct: 259 MTPEAEQLLPVLQRYGFET 277
>gi|255009918|ref|ZP_05282044.1| putative glutamate racemase [Bacteroides fragilis 3_1_12]
gi|313147706|ref|ZP_07809899.1| glutamate racemase [Bacteroides fragilis 3_1_12]
gi|313136473|gb|EFR53833.1| glutamate racemase [Bacteroides fragilis 3_1_12]
Length = 280
Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats.
Identities = 59/261 (22%), Positives = 107/261 (40%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L K+R +P+Y +IY+ D+ PYG + + + + L +
Sbjct: 11 PIGVFDSGYGGLTILSKIREALPDYDYIYLGDNARTPYGTRSFEIVYEFTLQAVNK-LFE 69
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ACNTA + + L PS LG + P ++ + TQ+ + +L+T
Sbjct: 70 MGCHLVILACNTASAKALRTIQMNNLPDIDPSRRVLGVIRPTVECIGSITQTRHVGVLAT 129
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ IH + + + VE + + I+K I +
Sbjct: 130 AGTIKSESYPLEIHKLFPDIKVSGEACPMWVPLVENNEANGEGTDFFIRKYIHNLLA--K 187
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFD 246
+ D I+L CTHYPL++ +Q P + + + +A + L R +
Sbjct: 188 DGQIDTIILGCTHYPLLLPKIQQFVPQSMKVVAQGEYVAASLKDYLYRHPEMDRKCTRGG 247
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ + D +
Sbjct: 248 SCSFCTTEAEDKFIESASTFL 268
>gi|198275393|ref|ZP_03207924.1| hypothetical protein BACPLE_01555 [Bacteroides plebeius DSM 17135]
gi|198271729|gb|EDY95999.1| hypothetical protein BACPLE_01555 [Bacteroides plebeius DSM 17135]
Length = 281
Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats.
Identities = 56/270 (20%), Positives = 105/270 (38%), Gaps = 11/270 (4%)
Query: 6 YPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
YP I +FDSG GGL +L K +P+Y ++Y+ D+ PYG + +
Sbjct: 2 YPLSAPHTGPIGVFDSGYGGLTILGKFIERLPQYDYLYLGDNARAPYGTRSFEVVYDFTL 61
Query: 66 FLFSDILDKYQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQ 119
L + L ++ACNTA + +++L P+ LG + P ++ T+
Sbjct: 62 QAV-KKLFELGCPLVILACNTASAKALRSIQQNDLPHMDPTRRVLGVIRPTVECIGEITR 120
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+G + +L+T T+R I + ++ + VE + +KK
Sbjct: 121 NGHVGLLATAGTVRSESYPLEIKKIFPDIQVTGMACPMWVPLVENKEYDGDGADYFVKKY 180
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
I+ + D ++L CTHYPL++ RQ +P + + + ++ + L R
Sbjct: 181 IDTILQ--KDPDIDTLILGCTHYPLLLQKIRQYTPSHIRLVTQGEYVSESLKDYLSRHPD 238
Query: 240 H--QTRVFDDHALFLSGKPDIAMRRLMQGF 267
+ + +
Sbjct: 239 MDARCSKNKRREFLTTESVEKFRESASVFL 268
>gi|319424831|gb|ADV52905.1| glutamate racemase [Shewanella putrefaciens 200]
Length = 268
Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats.
Identities = 77/265 (29%), Positives = 124/265 (46%), Gaps = 10/265 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSGIGGL VL ++R L+P+ + Y+ D+ PYG E+ L + L ++
Sbjct: 1 MSRPILVFDSGIGGLSVLAEIRKLLPQKEYCYLFDNARLPYGELEEQVLISGCVTLIEEL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + V+ACNTA TL+ LR S+ +G VPAIK AA ++S I +L+TP T
Sbjct: 61 AIRIDAAIVVVACNTASTLVLPALREKL-SIPIVGVVPAIKPAALMSKSKRIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+RR YT LI + CH+ L L E+ + + +
Sbjct: 120 VRRHYTHKLISQFADGCHVELFGCSELVMMAEQKVATGILN----IERLARILAPVVAAD 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA-- 249
DV+VL CTH+P+I + + + V LD+ ++IA+R LL + +
Sbjct: 176 LDVLVLGCTHFPMIRNELQLVLGAGVTLLDSGEAIAKRVVALLAQESEVLDNKTMGSKAS 235
Query: 250 ---LFLSGKPDIAMRRLMQGFGLKS 271
+ + + + G +
Sbjct: 236 MSAYYTKAEISEGLSSTLADCGFSA 260
>gi|330996365|ref|ZP_08320248.1| glutamate racemase [Paraprevotella xylaniphila YIT 11841]
gi|329573223|gb|EGG54837.1| glutamate racemase [Paraprevotella xylaniphila YIT 11841]
Length = 281
Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats.
Identities = 56/262 (21%), Positives = 95/262 (36%), Gaps = 12/262 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L ++R LMP+Y ++Y+ D+ PYG + + L
Sbjct: 11 PIGVFDSGYGGLTILHEIRQLMPQYDYLYLGDNARTPYGTRSFEVVYEFTREAVQK-LFD 69
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF-------PSMAFLGAVPAIKQAAAYTQSGLISILS 127
L ++ACNTA ++ P + T S + IL+
Sbjct: 70 LGCHLVILACNTASAKALKTIQQNDLPKMEGETRRVLGVIRPTAECIGQITHSRHVGILA 129
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+ I + + + VE Y + ++K I +
Sbjct: 130 TSGTISSGSYPLEIRKLYPDIAVSGEACPMWVPLVENYEYDSPGADYFVEKRIGNLL--R 187
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVF 245
+ D I+L CTHYPL+++ + +P V + + +A + L R +T
Sbjct: 188 KDPAIDTIILGCTHYPLLLNKILKYTPRNVRIVPQGEYVAYSLKDYLQRHTEIETLCTQS 247
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
+ PD
Sbjct: 248 GTCRFLTTESPDKFTESASIFL 269
>gi|206560649|ref|YP_002231414.1| glutamate racemase [Burkholderia cenocepacia J2315]
gi|198036691|emb|CAR52590.1| putative glutamate racemase [Burkholderia cenocepacia J2315]
Length = 285
Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats.
Identities = 67/259 (25%), Positives = 104/259 (40%), Gaps = 8/259 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ IFDSG+GGL VL+ R +P+ F+YVAD PYG ++ + +R + + + L +
Sbjct: 15 PVGIFDSGLGGLSVLRAARAHLPDESFVYVADSHHAPYGPRDEAFITERTLAI-GEWLAR 73
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
VIACNTA +R S+ +G P IK AAA + +G+ +L+T +TL
Sbjct: 74 EGAKALVIACNTATARAIAAIRERL-SIPLVGVEPGIKPAAALSATGVAGVLATQSTLNS 132
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
L+ Y + L +E ++ +E D
Sbjct: 133 PRFQALLDRYGAGRRFICQPGHGLVEAIERGDTN----SPALRALLERYIQPMLDDGADT 188
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV--FDDHALFL 252
+VL CTHYP R L + +D SD+IAR+ +L
Sbjct: 189 LVLGCTHYPFFTETIRDLVGERLTIVDTSDAIARQLARVLDERGLRAPAGTHAAPPRFCS 248
Query: 253 SGKPDIAMRRLMQGFGLKS 271
+ GL +
Sbjct: 249 TSDGLQLRALASTLLGLDA 267
>gi|217969659|ref|YP_002354893.1| glutamate racemase [Thauera sp. MZ1T]
gi|217506986|gb|ACK53997.1| glutamate racemase [Thauera sp. MZ1T]
Length = 268
Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats.
Identities = 51/259 (19%), Positives = 98/259 (37%), Gaps = 7/259 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GGL V++ + +P +Y D PYG ++ + +L
Sbjct: 6 RPIGVFDSGVGGLTVVRALMERLPLEDIVYFGDTARVPYGVKSVATIEHFTAQITEFLLQ 65
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISILSTPATL 132
+ + +IACNT + D + + L + + A A + I ++ TP T+
Sbjct: 66 R-DVKMLIIACNTMAAVAADVVHRLAAGIPVLDVIEAGARAAVAASPGRRIGVIGTPTTI 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ +H ++ + + VE + + + + +
Sbjct: 125 NSNAYARRMHELDPAVRVYSQACPLFVPLVE----EGWLDHEVTRLTAQEYLRPVLAEEV 180
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALF 251
D +VL CTHYPL+ + R ++ V +D++ + A A L + D+
Sbjct: 181 DSLVLGCTHYPLLKPLLRDVAGARVRLIDSALTTAELAAERLQLSGLARGGGGVADYRFV 240
Query: 252 LSGKPDIAMRRLMQGFGLK 270
+S P + G
Sbjct: 241 VSDVPLRFQTIGERFLGRS 259
>gi|281425969|ref|ZP_06256882.1| glutamate racemase [Prevotella oris F0302]
gi|281399862|gb|EFB30693.1| glutamate racemase [Prevotella oris F0302]
Length = 278
Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats.
Identities = 57/261 (21%), Positives = 101/261 (38%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L +R L+P+Y +IY+ D+ PYG + + L +
Sbjct: 10 PIGVFDSGYGGLTILHGIRQLLPQYDYIYLGDNARAPYGTRSFDVVYQFTRQAVMK-LFE 68
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ CNTA + + +L + PS LG + P + T++ + +L+T
Sbjct: 69 LGCHLVILGCNTASAKALRSIQRTDLPNLDPSRRVLGVIRPTAEIIGTLTKNNHVGLLAT 128
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ I + + V+ VE + +KK I+ +
Sbjct: 129 EGTVKSHSYDLEIKKLWPEIKVTGVACPFWVPLVEYNEADSPGADYFVKKRIDELMLH-- 186
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRVFD 246
D I+L CTHYP+++ + V + + +A + L R HQ
Sbjct: 187 DPDIDTIILGCTHYPILMPKIVKYVRPGVRIVPQGEYVAGSLQDYLRRHTDMEHQLTQGG 246
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ P+
Sbjct: 247 SCRYLTTENPERFKESAQIFL 267
>gi|298253437|ref|ZP_06977229.1| glutamate racemase [Gardnerella vaginalis 5-1]
gi|297532832|gb|EFH71718.1| glutamate racemase [Gardnerella vaginalis 5-1]
Length = 256
Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats.
Identities = 59/260 (22%), Positives = 105/260 (40%), Gaps = 7/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+I +FDSG+GG+ V +++ +P IY D PYG +KK +
Sbjct: 1 MASSAAIGVFDSGLGGISVARQLHAALPHERIIYFGDSANAPYGIKTPEEVKKLSFAIVE 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--S 127
+ VIACNTA + ++LR+ + ++ +G PA+K A + ++ +
Sbjct: 61 HFVRL-NVKAVVIACNTATSAAVNDLRAHY-NIPIIGMEPALKLACDLGKGEPQRVIVAA 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TP TLR ++L+ + I L VE D + + F E
Sbjct: 119 TPLTLRERKFADLLQRFSQNNTIFSQPCPDLVRIVERGELS---NRDVVFAALHKYFDEY 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+ D +VL CTH+ FR+ P + +D ++ R +L N + +
Sbjct: 176 DLDSIDSVVLGCTHFVFYRDYFREFLPARTNIVDGNEGTINHLRKILELNNELASDSQEG 235
Query: 248 HALFLSGKPDIAMRRLMQGF 267
+ + M++L +
Sbjct: 236 SITLTNSDTSLRMQQLAKSL 255
>gi|260592030|ref|ZP_05857488.1| glutamate racemase [Prevotella veroralis F0319]
gi|260536314|gb|EEX18931.1| glutamate racemase [Prevotella veroralis F0319]
Length = 279
Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats.
Identities = 56/261 (21%), Positives = 104/261 (39%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L +R L+PEY ++Y+ D+ PYG+ + + L +
Sbjct: 10 PIGVFDSGYGGLTILHGIRQLLPEYDYLYLGDNARAPYGSRSFDVVYQFTRQAVMK-LFE 68
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ CNTA + +++L P LG + P + T+S + +L+T
Sbjct: 69 SGCQLVILGCNTASAKALRSIQQNDLPKLDPQRRVLGVIRPTAEVIGKLTRSHHVGLLAT 128
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ + I + V+ + +E + +KK I+ I +
Sbjct: 129 EGTVKSQSYNIEIQKLWPDVKVTGVACPLWVPIIENNEADSPGADYFVKKRIDH--IMRI 186
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFD 246
D ++L CTHYP+++ + P V + + +A + L R + R
Sbjct: 187 DPEIDTLILGCTHYPILMPKIIKYVPRGVRIVPQGEYVAESLQDYLRRHPDMEQRCTKHA 246
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ P+
Sbjct: 247 TVRYLTTENPEKFKENAQIFI 267
>gi|330444840|ref|ZP_08308495.1| glutamate racemase [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328489150|dbj|GAA02992.1| glutamate racemase [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 269
Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats.
Identities = 81/225 (36%), Positives = 127/225 (56%), Gaps = 6/225 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I+IFDSG+GGL V +++ L+P+ +IY D+ FPYG D L +R ++ S +++
Sbjct: 5 KKIVIFDSGVGGLSVYKEIYDLLPQVQYIYAFDNAAFPYGELPDDVLIERTNYIVSTLVE 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+YQ L VIACNTA T++ LR ++ +G VPAIK AA +Q+ +I +L+TPAT++
Sbjct: 65 QYQADLVVIACNTASTIVLPTLRKHL-TVPVVGVVPAIKPAAKLSQTKVIGLLATPATVK 123
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R+YT LI + S C + ++ S L E+ G I DE+ + ++ D
Sbjct: 124 RSYTQQLISQFASDCEVKMIGSTRLVEMAEQKLRGEAISLDELSDILAPW-----QQQVD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
I+L CTH+PLI + + V +D+ +IA R LL +
Sbjct: 179 SIILGCTHFPLIKDEIQAVLNNDVYIVDSGKAIANRVASLLELTD 223
>gi|314984207|gb|EFT28299.1| glutamate racemase [Propionibacterium acnes HL005PA1]
Length = 284
Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats.
Identities = 56/260 (21%), Positives = 103/260 (39%), Gaps = 8/260 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + I IFDSG GGL V + + LMP +Y+ D PYG +++ +
Sbjct: 9 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRQYALQCLDR- 67
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + +IACNTA + + + R + +PA ++A+A T++G I ++ T AT
Sbjct: 68 LVAHGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVICTEAT 127
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
R + + + + + VE+ E++ +
Sbjct: 128 ARSLSYEDALAAV-PGITLTTQACPKFVPFVEDGITSG----PELETIAREYLAPIQEAG 182
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ + + + +S AR + L+ + D F
Sbjct: 183 CDTLILGCTHYPLLAGLISYVLGAAPALISSSQQCARASYSLMAESGLLHSHPRDSSRYF 242
Query: 252 -LSGKPDIAMRRLMQGF-GL 269
+G + + + G
Sbjct: 243 LTTGNAERFEKLGRRLMEGF 262
>gi|332881250|ref|ZP_08448900.1| glutamate racemase [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332680626|gb|EGJ53573.1| glutamate racemase [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 281
Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats.
Identities = 57/262 (21%), Positives = 96/262 (36%), Gaps = 12/262 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L ++R LMP+Y ++Y+ D+ PYG + + L
Sbjct: 11 PIGVFDSGYGGLTILHEIRQLMPQYDYLYLGDNARTPYGTRSFEVVYEFTREAVQK-LFD 69
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF-------PSMAFLGAVPAIKQAAAYTQSGLISILS 127
L ++ACNTA ++ P + T S + IL+
Sbjct: 70 LGCHLVILACNTASAKALKTIQQNDLPQMEGETRRVLGVIRPTAECIGQITHSRHVGILA 129
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+ I + + + VE Y + ++K I +
Sbjct: 130 TSGTISSGSYPLEIRKLYPDIVVSGEACPMWVPLVENYEYDSPGADYFVEKRIGNLL--R 187
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVF 245
+ D I+L CTHYPL+++ + +P V + + +A + L R +T
Sbjct: 188 KDPAIDTIILGCTHYPLLLNKILKYTPRNVRIVPQGEYVAYSLKDYLQRHTEIETLCTQS 247
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
+ PD M
Sbjct: 248 GTCRFLTTESPDKFMESASIFL 269
>gi|117620688|ref|YP_854602.1| glutamate racemase [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|117562095|gb|ABK39043.1| glutamate racemase [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 264
Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats.
Identities = 84/261 (32%), Positives = 136/261 (52%), Gaps = 11/261 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL+FDSG+GGL + +++R +P +++ Y D+ FPYG + AL + L S ++ ++
Sbjct: 4 ILVFDSGMGGLTIYREIRRALPAHNYFYCFDNANFPYGELSEAALTEVCTRLVSHMVVEH 63
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L VIACNTA T+ LR+ ++ +G VPAIK AAA T++G I +L+TP T+ R
Sbjct: 64 DIDLVVIACNTASTIALPSLRAAM-TVPVVGVVPAIKPAAALTRNGCIGLLATPGTVSRE 122
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + + L + L E G+ + +++ + + D +
Sbjct: 123 YTHELIAQFAPGKRVLLKGATELVVEAEHKLAGLPVNMALLREVLADWLE--GEEHPDTL 180
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF--DDHALFLS 253
VL CTH+PL+ RQL P +D+ ++A+R LL + T TR+ A
Sbjct: 181 VLGCTHFPLLDEEIRQLMPA-CQLVDSGSAVAKRVAHLLAGLVTTPTRLEDVGGKAYCT- 238
Query: 254 GKPDIAMRRL---MQGFGLKS 271
+ D ++L +Q +GL S
Sbjct: 239 -RLDAQTQKLTAPLQAWGLSS 258
>gi|302346059|ref|YP_003814412.1| glutamate racemase [Prevotella melaninogenica ATCC 25845]
gi|302149137|gb|ADK95399.1| glutamate racemase [Prevotella melaninogenica ATCC 25845]
Length = 279
Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats.
Identities = 55/261 (21%), Positives = 102/261 (39%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG GGL +L +R L+PEY ++Y+ D+ PYG+ + + L
Sbjct: 10 PIGIFDSGYGGLTILHGIRQLLPEYDYLYLGDNARAPYGSRSFDVVYQFTRQAVMK-LFD 68
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ CNTA + +++L + P LG + P + T+S + +L+T
Sbjct: 69 LGCQLVILGCNTASAKALRTIQQNDLPNLDPDRRVLGVIRPTAEVIGKLTRSRHVGVLAT 128
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ + I + V + +E + +KK I+ I +
Sbjct: 129 EGTIKSDSYNLEIQKLWEDVKVTGVPCPLWVPIIENNEADSPGADYFVKKRIDH--IMRL 186
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFD 246
D ++L CTHYP+++ + P V + + +A + R +
Sbjct: 187 DPEIDTLILGCTHYPILMPKILKHVPRGVRIVPQGEYVAESLQDYFRRHPDMDARCTKNA 246
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ + P+
Sbjct: 247 TVKYYTTENPEKFKETARIFL 267
>gi|86148655|ref|ZP_01066936.1| glutamate racemase [Vibrio sp. MED222]
gi|85833574|gb|EAQ51751.1| glutamate racemase [Vibrio sp. MED222]
Length = 268
Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats.
Identities = 82/266 (30%), Positives = 139/266 (52%), Gaps = 11/266 (4%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ +Q +ILIFDSG+GGL V +++ L+P +++ YV D+ +PYG + L R+ +
Sbjct: 3 VSESIQKNILIFDSGVGGLSVYKEISHLLPNHNYTYVFDNEAYPYGELDQQVLIHRVQSI 62
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ + + + VIACNTA T++ LR+ P + +G VPAIK A+ + + +++
Sbjct: 63 VASFVASHAIDIVVIACNTASTIVLPTLRANNP-IPIVGVVPAIKPASLL-ANKAVGLIA 120
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TPAT+ R YT LI ++ S + L+ S L E+ G I +E+++ ++
Sbjct: 121 TPATITREYTHELIKNFSSNKRVELLGSTQLVDMAEDKLRGEAINLEELQQILQPMI--- 177
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
DV VL CTH+PLI +Q+ V +D+ +IA+R + LL + T
Sbjct: 178 --NTIDVAVLGCTHFPLIKSEIQQVLGKNVMLIDSGKAIAKRVQDLLDLES--STEEGGV 233
Query: 248 HALFLSGKP--DIAMRRLMQGFGLKS 271
F S P + A+ +++ G S
Sbjct: 234 REAFCSALPKKESALNSMLKRLGFSS 259
>gi|319898188|ref|YP_004136385.1| glutamate racemase [Haemophilus influenzae F3031]
gi|317433694|emb|CBY82082.1| glutamate racemase [Haemophilus influenzae F3031]
Length = 269
Score = 212 bits (540), Expect = 5e-53, Method: Composition-based stats.
Identities = 73/263 (27%), Positives = 129/263 (49%), Gaps = 5/263 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K+ + ++L FDSG+GG V ++ + L+P + ++Y D+ GFPY ++ ++ R +
Sbjct: 4 KEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSERKEESIIHRTLSACQ 63
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T
Sbjct: 64 LINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLATK 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++R Y L+ + C + + + L E+ G + +K E+
Sbjct: 123 GTVKRHYIDELVDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPWAGM--- 179
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D +VL CTH+PLI + P ++D S +IA+R + LL N +
Sbjct: 180 ADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQVQNEKYNQM 239
Query: 250 LFLSGKPDI-AMRRLMQGFGLKS 271
+ P+ ++ + +G +S
Sbjct: 240 FCTAHFPEESQFKKALHLWGFES 262
>gi|313887367|ref|ZP_07821057.1| glutamate racemase [Porphyromonas asaccharolytica PR426713P-I]
gi|312923135|gb|EFR33954.1| glutamate racemase [Porphyromonas asaccharolytica PR426713P-I]
Length = 281
Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats.
Identities = 51/270 (18%), Positives = 106/270 (39%), Gaps = 14/270 (5%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
++++ I +FDSG GGL +L+K++ +P+Y F+Y+ D+ PYG+ + +
Sbjct: 1 MQQIEGPIGVFDSGYGGLTILRKLQEQLPQYDFVYLGDNARSPYGSRSMRVVYQFTREAV 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRST---------FPSMAFLGAVPAIKQAAAYTQ 119
L L ++ACNTA +++ P ++ T
Sbjct: 61 ER-LFDLGCPLVILACNTASAKALRQIQQEDLPKLDGGSMRRRVLGIIRPTVECIDTLTS 119
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+ + IL+T T+ IH + + + VE + ++K
Sbjct: 120 TKHVGILATEGTVSSESYVTEIHKLYPDVTVVQEACPLWVPIVETGESDSPGADFFVRKH 179
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
+E + ++ D I+L CTHYP+++ ++L + + + +A+ L R
Sbjct: 180 LERLLAQ--DEKIDTIILGCTHYPILMPKIQRLLTPSIKVVAQGELVAKSLEEYLVRHPE 237
Query: 240 HQTRVF--DDHALFLSGKPDIAMRRLMQGF 267
++ + + + + R F
Sbjct: 238 MAAQLTRGGTTRYYTTEQTERFSRTASIFF 267
>gi|78184894|ref|YP_377329.1| glutamate racemase [Synechococcus sp. CC9902]
gi|78169188|gb|ABB26285.1| glutamate racemase [Synechococcus sp. CC9902]
Length = 262
Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats.
Identities = 66/259 (25%), Positives = 106/259 (40%), Gaps = 11/259 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + FDSGIGGL VL+++ IY+ D PYG+ ++ + +
Sbjct: 1 MTPLLGFFDSGIGGLTVLRQVLERHGPVQCIYLGDTARVPYGSRSAPEIRLIAAEVVA-W 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L Q V+ACNT L R A + I AAA Q+ + +L+TPAT
Sbjct: 60 LRDQQVSTVVMACNTTNAL----ARDVAEGQAGGPVIGLIGAAAAMVQTSRVGVLATPAT 115
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + I + + + +E + DE+++ +
Sbjct: 116 VASEAYRSSIEALHPGTLVVEQACPEFVPLIE----SGDLSSDELRRTAKEYLQPLLKAS 171
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL--PRINTHQTRVFDDHA 249
+ IVL CTHYPL+ V RQL P V +D + +AR+ +L P+ + + DD
Sbjct: 172 VESIVLGCTHYPLLEPVLRQLLPDSVQLIDPAVGVARQLDSVLGAPKPSVGEGLHLDDCR 231
Query: 250 LFLSGKPDIAMRRLMQGFG 268
++ PD R G
Sbjct: 232 FCVTADPDGFATRATPWLG 250
>gi|300725872|ref|ZP_07059336.1| glutamate racemase [Prevotella bryantii B14]
gi|299776860|gb|EFI73406.1| glutamate racemase [Prevotella bryantii B14]
Length = 280
Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats.
Identities = 54/261 (20%), Positives = 98/261 (37%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L +R L+P+Y ++Y+ D+ PYG + + +
Sbjct: 10 PIGVFDSGYGGLTILHGIRQLLPQYDYLYLGDNARAPYGIRSFDVVYQFTRQAVLKMFQM 69
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ CNTA + + +L PS LG + P + T S + +L+T
Sbjct: 70 -GCQLVILGCNTASAKALRSIQQRDLPELDPSRRVLGVIRPTAEIIGNLTSSRHVGLLAT 128
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ I + V+ VE + +KK ++ +
Sbjct: 129 EGTIKSQSYDIEIKKLFPDIQVSGVACPFWVPLVEYNEMDSPGADYFVKKRVDELM--LK 186
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN--THQTRVFD 246
K D I+L CTH+PL++ + + + + +A + L R H+
Sbjct: 187 DKDIDAIILGCTHFPLLMPKIIKYVSPSIRIISQGEYVADSLKAYLERHPEMEHKCTKGG 246
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ + D
Sbjct: 247 SCHYYTTENADKFKDSASIFL 267
>gi|170733557|ref|YP_001765504.1| glutamate racemase [Burkholderia cenocepacia MC0-3]
gi|169816799|gb|ACA91382.1| glutamate racemase [Burkholderia cenocepacia MC0-3]
Length = 285
Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats.
Identities = 67/259 (25%), Positives = 104/259 (40%), Gaps = 8/259 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ IFDSG+GGL VL+ R +P+ F+YVAD PYG ++ + +R + + + L +
Sbjct: 15 PVGIFDSGLGGLSVLRAARAHLPDESFVYVADSHHAPYGPRDEAFITERTLAI-GEWLAR 73
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
VIACNTA +R S+ +G P IK AAA + +G+ +L+T +TL
Sbjct: 74 EGAKALVIACNTATARAIAAIRERL-SIPLVGVEPGIKPAAALSATGVAGVLATQSTLNS 132
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
L+ Y + L +E ++ +E D
Sbjct: 133 PRFQALLDRYGAGRRFICQPGHGLVEAIERGDTN----SPALRALLERYIQPMLDDGADT 188
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV--FDDHALFL 252
+VL CTHYP R L + +D SD+IAR+ +L
Sbjct: 189 LVLGCTHYPFFTETIRDLVGERLTIVDTSDAIARQLARVLDERGLRAPAGTHAAPPRFCS 248
Query: 253 SGKPDIAMRRLMQGFGLKS 271
+ GL +
Sbjct: 249 TSDGLQLHALASTLLGLDA 267
>gi|251778481|ref|ZP_04821401.1| glutamate racemase [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243082796|gb|EES48686.1| glutamate racemase [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 258
Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats.
Identities = 65/258 (25%), Positives = 109/258 (42%), Gaps = 6/258 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K I FDSG+GGL V+++ LMP ++IY D PYG ++ F +
Sbjct: 3 KKNRPIGFFDSGVGGLSVMKEAICLMPNENYIYFGDSKNAPYGIKTVEEVRTLT-FNAVE 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L + V+ACNTA + D +RS + ++ +G PA+K A Y + G I I++TP
Sbjct: 62 SLLEQNVKAIVVACNTATSAAIDLVRSKYKNIPIIGIEPALKLATKYNRKGNIIIMATPM 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TL+ +L+ Y I + L +E + E+ +K++ + +
Sbjct: 122 TLKEKKFKSLMEKYGENYDIVSLPCAKLVEFIEHGILNGEELEEYLKEKFKSY----KNN 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHA 249
V+VL CTHYP I ++ + +D ++ R L N T
Sbjct: 178 DIGVVVLGCTHYPFIKETLYKVIDKDIPIIDGGLGTSQELRRRLEEKNLLNTEDKKGSIT 237
Query: 250 LFLSGKPDIAMRRLMQGF 267
+ S + + +
Sbjct: 238 IINSNGSEKMIELSKRLI 255
>gi|229497077|ref|ZP_04390781.1| glutamate racemase [Porphyromonas endodontalis ATCC 35406]
gi|229316002|gb|EEN81931.1| glutamate racemase [Porphyromonas endodontalis ATCC 35406]
Length = 277
Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats.
Identities = 57/262 (21%), Positives = 99/262 (37%), Gaps = 12/262 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG GGL +L+++R LMP+Y ++Y+ D+ PYG+ + K + L +
Sbjct: 7 PIGIFDSGYGGLTILREIRKLMPQYDYLYLGDNARSPYGSRSFEIVYKFTLQAVER-LFE 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLG-------AVPAIKQAAAYTQSGLISILS 127
L ++ACNTA ++ P ++ T S + IL+
Sbjct: 66 MGCPLVILACNTASAKALRTIQQQDLPQMSDPSRRVLGIIRPTVEAVDTITASKHVGILA 125
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+ I + + + VE + ++K ++
Sbjct: 126 TEGTVSSHSYQMEIAKLFPHIIVSEEACPMWVPLVENGEADSPGADYYVRKHLDALLC-- 183
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VF 245
+ K D IVLACTHYPL+ ++L + + + +A + L R R
Sbjct: 184 KDKAIDTIVLACTHYPLLRQKIKRLITPSITVVSQGEYVASSLQDYLGRQTEMDARLSKS 243
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
+ + D +
Sbjct: 244 GSIRYLTTEQADKFAEKASVFL 265
>gi|298370218|ref|ZP_06981534.1| glutamate racemase [Neisseria sp. oral taxon 014 str. F0314]
gi|298281678|gb|EFI23167.1| glutamate racemase [Neisseria sp. oral taxon 014 str. F0314]
Length = 269
Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 106/260 (40%), Gaps = 8/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL ++ + +P + +Y D PYG ++ + + L
Sbjct: 6 QRPIGVFDSGVGGLTNVRALMERLPMENIVYFGDTARVPYGTKSRATIETFALQIVD-FL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
+ +IACNT + ++R +M L + A + A + T++ I I++T T
Sbjct: 65 LEQDVKALIIACNTIAAVAGQKIRQKAGNMPVLDVISAGAEAALSTTRNNRIGIIATNTT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IHS + ++ +L VE + + +
Sbjct: 125 VNSNAYARAIHSRNPDTLVRTQAAALLVPLVE----EGWLDHEVTRLTAREYLKPLLVDN 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
D +VL CTH+PL+ + RQ +P V +D++ + A A L + T D+
Sbjct: 181 IDTLVLGCTHFPLLKPLIRQEAPD-VTLVDSAITTAEAAAKALAQAGLLNTDNPEPDYRF 239
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
++S P + G
Sbjct: 240 YVSDIPLRFRTIGERFLGRS 259
>gi|213961790|ref|ZP_03390056.1| glutamate racemase [Capnocytophaga sputigena Capno]
gi|213955579|gb|EEB66895.1| glutamate racemase [Capnocytophaga sputigena Capno]
Length = 271
Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats.
Identities = 58/253 (22%), Positives = 112/253 (44%), Gaps = 9/253 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG + +++ LMP +++AD+ PYG + + L
Sbjct: 10 PIGLFDSGVGGTTIWKEINALMPNESTLFLADNKNAPYGEKTKEEIITLCDAN-TQFLLA 68
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ + V+ACNT T LR+ + + F+G PAIK A+ + + I +L+T +TL
Sbjct: 69 QKAKIIVVACNTGTTNAISYLRNKYKDVPFIGIEPAIKPASLQSVTKKIGVLATRSTLAS 128
Query: 135 TYTSNLIHSYVSQCHI--HLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + L +E +I+ E+ + + +
Sbjct: 129 DLFAKTSEHLKQEEQVEIIEQVGEGLVDLIE----AGRIESPEMTQLLRHHLLPMVALGI 184
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFDDHAL 250
D +VL CTHYP ++ +QL P + +D+ ++A++ R +L + + T + H
Sbjct: 185 DYLVLGCTHYPYLLPQIQQLIPARIKVIDSGYAVAKQTRNILLQHHLLNEDTSMTPSHIW 244
Query: 251 FLSGKPDIAMRRL 263
+G ++ +
Sbjct: 245 LANGNTEVLKQFA 257
>gi|82702343|ref|YP_411909.1| glutamate racemase [Nitrosospira multiformis ATCC 25196]
gi|82410408|gb|ABB74517.1| glutamate racemase [Nitrosospira multiformis ATCC 25196]
Length = 268
Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats.
Identities = 60/255 (23%), Positives = 108/255 (42%), Gaps = 12/255 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I +FDSGIGGL VLQ ++ P+ ++Y+ D PYG + +R IL
Sbjct: 7 SPIAVFDSGIGGLTVLQALKKRYPQESYVYLGDTARLPYGTKSP-EIVQRYSQSLCRILL 65
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATL 132
Y P VIACNTA T + +R+ + +G + PA A T++ I +++T T+
Sbjct: 66 NYNPSAIVIACNTASTHALEAVRALAAPLPVIGMIEPAAAAAIQATKNQHIGVIATFGTI 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R + + +L + EE I +++ ++ F E
Sbjct: 126 RSGVYEKELKKINPHIKASSQACQMLVALAEEGWSSGPIATAIVRQYLDPIFDTAEAP-- 183
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTH+P+ +FR + V +++ ++ A + + T +
Sbjct: 184 DTLILGCTHFPVFEALFRDILGSSVTLINSGEAAATQLSGI--------TGTRGQIKMLA 235
Query: 253 SGKPDIAMRRLMQGF 267
+ P+ + F
Sbjct: 236 TDDPERFAANASKFF 250
>gi|319900213|ref|YP_004159941.1| glutamate racemase [Bacteroides helcogenes P 36-108]
gi|319415244|gb|ADV42355.1| glutamate racemase [Bacteroides helcogenes P 36-108]
Length = 281
Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats.
Identities = 55/261 (21%), Positives = 105/261 (40%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L K+R +P+Y +IY+ D+ PYG + + + + L +
Sbjct: 11 PIGVFDSGYGGLTILSKIREALPQYDYIYLGDNARAPYGTRSFEIVYEFTLQAVTK-LFE 69
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ACNTA + ++L P LG + P +++ T++ + +L+T
Sbjct: 70 MGCHLVILACNTASAKALRSIQINDLPHLDPMRRVLGVIRPTVERIGDITKNRHVGVLAT 129
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ IH + + + VE + I+K I +
Sbjct: 130 AGTIKSGSYPLEIHKLFPDIRVSGEACPMWVYLVENNEAQGDGTDYFIRKYINSLLA--K 187
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFD 246
++ D ++L CTHYPL++ R+ P + + + +A + L R +
Sbjct: 188 DRQVDTVILGCTHYPLLLPKIRRYMPEGITTVTQGELVAESLKDYLRRHPEMDKKCTKGG 247
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ +
Sbjct: 248 RCVYRTTEAEEKFTESASTFL 268
>gi|284049086|ref|YP_003399425.1| glutamate racemase [Acidaminococcus fermentans DSM 20731]
gi|283953307|gb|ADB48110.1| glutamate racemase [Acidaminococcus fermentans DSM 20731]
Length = 279
Score = 212 bits (539), Expect = 6e-53, Method: Composition-based stats.
Identities = 55/262 (20%), Positives = 98/262 (37%), Gaps = 6/262 (2%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ + I + DSG+GGL VL+ ++ +P FI++ D PYGN + + +
Sbjct: 1 MMQAKQPIGVIDSGVGGLTVLKWLQAKLPHEDFIFIGDTARTPYGNRSREEITRFVAE-M 59
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+D LDK V+ACNT L D ++ P +G + T++ + +T
Sbjct: 60 TDWLDKRHIKQLVVACNTITVLGLDVIKGNHP-FDVIGMAKGSRMVPGVTKNNRVGFFAT 118
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+ I + + +E G K E+K I +
Sbjct: 119 DFTVSTGAHKREIQRICPEIQVFGQGCPKFVPLIE----GEKFGSPELKAAIHEYADKLR 174
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
D ++L+CTHYP + + V LD ++ + A L + +T
Sbjct: 175 EHNVDTVLLSCTHYPFVRKEIEEEFGPEVTILDPAERTTQDALENLEKRGLARTTGLGRA 234
Query: 249 ALFLSGKPDIAMRRLMQGFGLK 270
+ + + R + L
Sbjct: 235 EICFTADLERGRRLAARMLDLS 256
>gi|16273625|ref|NP_439883.1| glutamate racemase [Haemophilus influenzae Rd KW20]
gi|6166587|sp|P52973|MURI_HAEIN RecName: Full=Glutamate racemase
gi|3212239|gb|AAC23386.1| glutamate racemase (murI) [Haemophilus influenzae Rd KW20]
Length = 269
Score = 212 bits (539), Expect = 6e-53, Method: Composition-based stats.
Identities = 74/263 (28%), Positives = 130/263 (49%), Gaps = 5/263 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K+ + ++L FDSG+GG V ++ + L+P +H++Y D+ GFPY ++ ++ R +
Sbjct: 4 KEKRPTVLFFDSGVGGFSVYREAKKLLPNWHYLYCFDNAGFPYSERKEESIIHRTLAACQ 63
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T
Sbjct: 64 LINQRYPLDAMVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLATK 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++R Y LI + C + + + L E+ G + +K E+
Sbjct: 123 GTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSSWAGM--- 179
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D +VL CTH+PLI + P +++ S +IA+R + LL N +
Sbjct: 180 ADLDTLVLGCTHFPLIKDEIQLCLPQVKYFMEPSAAIAKRIKYLLDDKNLQAQNEKYNQM 239
Query: 250 LFLSGKPDI-AMRRLMQGFGLKS 271
+ P+ ++ + +G +S
Sbjct: 240 FCTAHFPEESQFKKALHLWGFES 262
>gi|327399664|ref|YP_004340533.1| glutamate racemase [Hippea maritima DSM 10411]
gi|327182293|gb|AEA34474.1| Glutamate racemase [Hippea maritima DSM 10411]
Length = 254
Score = 212 bits (539), Expect = 6e-53, Method: Composition-based stats.
Identities = 53/253 (20%), Positives = 103/253 (40%), Gaps = 17/253 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V++++ IY+ D PYG + K + L ++
Sbjct: 7 IGVFDSGVGGLSVVKQLLKAF-NSDIIYLGDTARLPYGTKSKETVLKYSIQNAE-FLMRF 64
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA ++ D L+ F F PA K AA + + + ++ T +T++
Sbjct: 65 NVDAIVVACNTASSVAIDVLKKKFNLPVFGVIEPAAKLAAKFEK---VCVIGTTSTIQSN 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
I Y C + + + VE I +D + + + E D +
Sbjct: 122 AYPKKIAKYNKGCRVTQRACPLFVPLVE----EGWIYDDITYEVAKRYLYDLE---CDAL 174
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYPL+ + +++ V +D+ +++ + + + + + +
Sbjct: 175 ILGCTHYPLLREIIQRVMGVGVSLIDSGEALVKGLK---DFKDLFEGS--GRLNCYTTDS 229
Query: 256 PDIAMRRLMQGFG 268
+ + G
Sbjct: 230 EEKFAKLGSMFLG 242
>gi|288801916|ref|ZP_06407358.1| glutamate racemase [Prevotella melaninogenica D18]
gi|288335958|gb|EFC74391.1| glutamate racemase [Prevotella melaninogenica D18]
Length = 279
Score = 211 bits (538), Expect = 6e-53, Method: Composition-based stats.
Identities = 55/261 (21%), Positives = 102/261 (39%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG GGL +L +R L+PEY ++Y+ D+ PYG+ + + L +
Sbjct: 10 PIGIFDSGYGGLTILHGIRQLLPEYDYLYLGDNARAPYGSRSFDVVYQFTRQAVMK-LFE 68
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ CNTA + +++L + P LG + P + T S + +L+T
Sbjct: 69 LGCQLVILGCNTASAKALRTIQQNDLPNLDPDRRVLGVIRPTAEVIGKLTHSRHVGVLAT 128
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ + I + V + +E + +KK I+ I +
Sbjct: 129 EGTIKSDSYNLEIQKLWGDVKVTGVPCPLWVPIIENNEADSPGADYFVKKRIDH--IMRL 186
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFD 246
D ++L CTHYP+++ + P V + + +A + R +
Sbjct: 187 DPEIDTLILGCTHYPILMPKILKHVPRGVRIVPQGEYVAESLQDYFRRHPDMDARCTKNA 246
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ + P+
Sbjct: 247 TVKYYTTENPEKFKETARIFL 267
>gi|254502214|ref|ZP_05114365.1| glutamate racemase [Labrenzia alexandrii DFL-11]
gi|222438285|gb|EEE44964.1| glutamate racemase [Labrenzia alexandrii DFL-11]
Length = 260
Score = 211 bits (538), Expect = 7e-53, Method: Composition-based stats.
Identities = 114/247 (46%), Positives = 160/247 (64%)
Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82
+GGL VL++ R+L+P +YVADD FP G W + L RL F+ +++ + P VI
Sbjct: 1 MGGLTVLREARYLLPCERLLYVADDAAFPIGRWPEEDLLVRLQDQFTRLIEDHDPKAVVI 60
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTAFTL LR FP + F+G VPAIK AA T SGLIS+L+TP T+RR YT +LI
Sbjct: 61 ACNTAFTLGGVALREAFPGVPFVGTVPAIKPAAERTASGLISVLATPGTVRRAYTRSLIE 120
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
S+ +QCH+ LV S LA E++ G + ++ + EI CF+E+ G+RTD++VLACTHY
Sbjct: 121 SFAAQCHVRLVGSDNLAELAEQHLRGEPVSDEALLPEISDCFLEQNGQRTDIVVLACTHY 180
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRR 262
P + + FR+++PWPVDWLD +++IAR+ +L + D A+ SG A+ R
Sbjct: 181 PFLANRFRKIAPWPVDWLDPAEAIARQLVRVLGQDLASVPSESPDLAILTSGARKPAIER 240
Query: 263 LMQGFGL 269
L+ GFGL
Sbjct: 241 LLAGFGL 247
>gi|260774782|ref|ZP_05883684.1| glutamate racemase [Vibrio coralliilyticus ATCC BAA-450]
gi|260609207|gb|EEX35362.1| glutamate racemase [Vibrio coralliilyticus ATCC BAA-450]
Length = 263
Score = 211 bits (538), Expect = 7e-53, Method: Composition-based stats.
Identities = 85/263 (32%), Positives = 134/263 (50%), Gaps = 11/263 (4%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
LQ+ +LIFDSG+GGL V Q++ +P+ ++Y+ D+ +PYG + L R+ L S
Sbjct: 1 MSLQSKVLIFDSGVGGLSVFQEIEKKLPQLDYVYLFDNAAYPYGELDHETLVSRVEALVS 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ +Q L VIACNTA T++ LR T S+ +G VPAIK A+ + + +++TP
Sbjct: 61 QYVADHQVDLVVIACNTASTIVLPSLR-TLLSIPVVGVVPAIKPASNL-ANKAVGLIATP 118
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ R YT LI + + L+ S L EE G + E+K + +
Sbjct: 119 ATVTRQYTQELIRDFSQSKPVELLGSTRLVDMAEEKLRGTPVSNQELKAVLSPMIGK--- 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
DV VL CTH+PLI + + V +D+ ++IARR + LL + +
Sbjct: 176 --VDVAVLGCTHFPLIKEEIQSVLSEQVVLVDSGEAIARRVQELLNLED--KKEGKGLRE 231
Query: 250 LFLSGKP--DIAMRRLMQGFGLK 270
+F + P + A+ R +Q G
Sbjct: 232 IFSTAPPYAEGALNRALQNLGFS 254
>gi|258544909|ref|ZP_05705143.1| glutamate racemase [Cardiobacterium hominis ATCC 15826]
gi|258519829|gb|EEV88688.1| glutamate racemase [Cardiobacterium hominis ATCC 15826]
Length = 272
Score = 211 bits (538), Expect = 7e-53, Method: Composition-based stats.
Identities = 61/260 (23%), Positives = 105/260 (40%), Gaps = 8/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL V++ + +P H IY D PYG ++ + L
Sbjct: 9 NRPIGVFDSGVGGLTVVRALMERLPLEHLIYYGDTARVPYGVKSRATIETYSAQIVE-YL 67
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT-QSGLISILSTPAT 131
+ VIACNT + D +R+ + L + A QAA T Q+ I++++T T
Sbjct: 68 LAQRVKALVIACNTIAAVAGDSIRAQARGLPVLDVITAGAQAALQTSQNHHIAVIATNTT 127
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + IH++ Q + + +L VE ++ D + +
Sbjct: 128 VNSNAYARAIHAHDPQARVQSQACPLLVPLVE----EGWLEHDVTRLTVREYLKPILADD 183
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-AL 250
D +VL CTHYPL+ + R+ +P + +D++ + A L + H
Sbjct: 184 ADTLVLGCTHYPLLKPLLREEAP-RLALVDSATTTAAHTAQALTAAGLLRQSGDSAHYRY 242
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
+S P + G
Sbjct: 243 CVSDIPLRFRAIGERFLGRS 262
>gi|170718701|ref|YP_001783892.1| glutamate racemase [Haemophilus somnus 2336]
gi|189030361|sp|B0URZ3|MURI_HAES2 RecName: Full=Glutamate racemase
gi|168826830|gb|ACA32201.1| glutamate racemase [Haemophilus somnus 2336]
Length = 267
Score = 211 bits (538), Expect = 7e-53, Method: Composition-based stats.
Identities = 78/242 (32%), Positives = 127/242 (52%), Gaps = 4/242 (1%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+Q +IL FDSG+GGL V ++ + L+P+ H++Y D+ FPY ++ + R + +
Sbjct: 4 SIQPTILFFDSGVGGLSVYKETKQLLPDCHYLYGFDNGFFPYSEKDEKDIIDRTLRICQK 63
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
I Y L VIACNTA T++ ELR F S+ +G VPAIK AA +++ I +++T
Sbjct: 64 INQTYPLDLIVIACNTASTVVLPELRRNF-SIPIVGTVPAIKPAAEMSETKHIGLIATKG 122
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++RTY ++LI +Y C + + S L E+ G ++ + +K+E+ K K
Sbjct: 123 TIKRTYVNDLIKNYAYHCMVEKIGSTKLVEIAEQKLRGGEVDLNVLKQELSPW---KTMK 179
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D +VL CTH+PLI P ++ + +IA+R + LL I +
Sbjct: 180 SLDSVVLGCTHFPLIKEEIECCLPQVKFFVSSGKAIAKRVKFLLKGIEVRSKIQKKNLIF 239
Query: 251 FL 252
Sbjct: 240 CT 241
>gi|116070411|ref|ZP_01467680.1| Glutamate racemase [Synechococcus sp. BL107]
gi|116065816|gb|EAU71573.1| Glutamate racemase [Synechococcus sp. BL107]
Length = 262
Score = 211 bits (538), Expect = 7e-53, Method: Composition-based stats.
Identities = 66/259 (25%), Positives = 106/259 (40%), Gaps = 11/259 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + FDSGIGGL VL+++ IY+ D PYG+ ++ + +
Sbjct: 1 MTPLLGFFDSGIGGLTVLRQVLERHGPVQCIYLGDTARVPYGSRSAPEIRLIAAEVVA-W 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L Q V+ACNT L R A + I AAA Q+ + +L+TPAT
Sbjct: 60 LRDQQVSTVVMACNTTNAL----ARDVAEGQAGGPVIGLIGAAAAMVQTSRVGVLATPAT 115
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ I + + + +E + DE+++ +
Sbjct: 116 VASEAYRFSIEALHPGTLVVEQACPEFVPLIE----SGDLSSDELRRTAKEYLHPLLEAS 171
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL--PRINTHQTRVFDDHA 249
+ IVL CTHYPL+ V RQL P V +D + +AR+ +L P+++ + DD
Sbjct: 172 VESIVLGCTHYPLLEPVLRQLLPDSVQLIDPAVGVARQLDSVLGAPKLSVGEGLHLDDCR 231
Query: 250 LFLSGKPDIAMRRLMQGFG 268
++ PD R G
Sbjct: 232 FCVTADPDGFATRATPWLG 250
>gi|333029733|ref|ZP_08457794.1| Glutamate racemase [Bacteroides coprosuis DSM 18011]
gi|332740330|gb|EGJ70812.1| Glutamate racemase [Bacteroides coprosuis DSM 18011]
Length = 279
Score = 211 bits (538), Expect = 8e-53, Method: Composition-based stats.
Identities = 53/261 (20%), Positives = 93/261 (35%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L+K+R +PEY +IY+ D+ PYG + K + L +
Sbjct: 10 PIGVFDSGYGGLTILEKIRKKLPEYDYIYLGDNARAPYGTRSFELVYKFTLQAV-KHLFE 68
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLG------AVPAIKQAAAYTQSGLISILST 128
L ++ACNTA ++ + P ++ T S I +++T
Sbjct: 69 EGCHLVILACNTASAKALRSIQQNDLPLLDPQRRVLGVIRPTVESINELTISNHIGVVAT 128
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ + + + + VE + +K+ I+ +
Sbjct: 129 LGTIKSESYPLELAKLFPHIKVSGEACPMWVPLVENNEFDTPGADYFVKQSIDNLLQQ-- 186
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFD 246
D I+L CTHYPL+ Q P + + +A+ + L R
Sbjct: 187 DSDIDTILLGCTHYPLLQSKIEQFVPNNIKVIAQGQYVAKSLQNYLERHPEIDRNCTKEG 246
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ D
Sbjct: 247 RCRFLTTEAVDKFKESASVFL 267
>gi|15605845|ref|NP_213222.1| glutamate racemase [Aquifex aeolicus VF5]
gi|6225737|sp|O66662|MURI_AQUAE RecName: Full=Glutamate racemase
gi|2983010|gb|AAC06621.1| glutamate racemase [Aquifex aeolicus VF5]
Length = 254
Score = 211 bits (538), Expect = 8e-53, Method: Composition-based stats.
Identities = 61/254 (24%), Positives = 107/254 (42%), Gaps = 15/254 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG GG+ VL+ +R P +Y+ D PYG + + ++ L
Sbjct: 2 KIGIFDSGAGGMTVLKAIREAYPNVDVVYLGDTARVPYGIRSKETIVRYSKE-CANFLKD 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L V+ACNTA +EL+ FP F P +K+A +++ I ++ T AT++
Sbjct: 61 KGVDLLVVACNTASAYALEELKREFPFPVFGVIEPGVKEALRKSKTKRIGVIGTQATIKS 120
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + ++ + + VEE +I KK +E + +GK D
Sbjct: 121 GAYQEALKRAGA--EVYSKACPLFVPLVEEGMIEGEIP----KKVVEHYLKDFKGK-VDT 173
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
++L CTHYPL+ + V+ +D+S + A+ + + L+ +
Sbjct: 174 LILGCTHYPLLKREIQNFL-EGVNVIDSSRATAKSLKDFVKNEG------SGSLELYFTD 226
Query: 255 KPDIAMRRLMQGFG 268
+ R + G
Sbjct: 227 RSQNLERLIKLILG 240
>gi|325859706|ref|ZP_08172836.1| glutamate racemase [Prevotella denticola CRIS 18C-A]
gi|325482632|gb|EGC85635.1| glutamate racemase [Prevotella denticola CRIS 18C-A]
Length = 279
Score = 211 bits (537), Expect = 8e-53, Method: Composition-based stats.
Identities = 57/261 (21%), Positives = 104/261 (39%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L +R L+PEY ++Y+ D+ PYG+ + + L
Sbjct: 10 PIGVFDSGYGGLTILHGIRQLLPEYDYVYLGDNARAPYGSRSFDIVYQFTRQAVMK-LFG 68
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ CNTA + +++L + P+ LG + P + T+S + +L+T
Sbjct: 69 LGCQLVILGCNTASAKALRTIQQNDLPALDPNRRVLGVIRPTAEIIGRLTRSRHVGLLAT 128
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+R + I + V + +E + +KK I+ I +
Sbjct: 129 EGTVRSNSYNLEIRKLWPDIKVTGVPCPLWVPIIENNEADSPGADYFVKKRIDH--IMRI 186
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFD 246
+ D ++L CTHYP+++ + P V + + +A R L R +
Sbjct: 187 DPQIDSLILGCTHYPILMPKILKHVPRGVRIIPQGEYVAESLRDYLRRHPDMDARCTKQS 246
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ P+
Sbjct: 247 TVKYLTTENPEKFKETARIFL 267
>gi|107028624|ref|YP_625719.1| glutamate racemase [Burkholderia cenocepacia AU 1054]
gi|116690217|ref|YP_835840.1| glutamate racemase [Burkholderia cenocepacia HI2424]
gi|105897788|gb|ABF80746.1| glutamate racemase [Burkholderia cenocepacia AU 1054]
gi|116648306|gb|ABK08947.1| glutamate racemase [Burkholderia cenocepacia HI2424]
Length = 285
Score = 211 bits (537), Expect = 9e-53, Method: Composition-based stats.
Identities = 67/259 (25%), Positives = 104/259 (40%), Gaps = 8/259 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ IFDSG+GGL VL+ R +P+ F+YVAD PYG ++ + +R + + + L +
Sbjct: 15 PVGIFDSGLGGLSVLRAARAHLPDESFVYVADSHHAPYGPRDEAFITERTLAI-GEWLAR 73
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
VIACNTA +R S+ +G P IK AAA + +G+ +L+T +TL
Sbjct: 74 EGAKALVIACNTATARAIAAIRERL-SIPLVGVEPGIKPAAALSATGVAGVLATQSTLNS 132
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
L+ Y + L +E ++ +E D
Sbjct: 133 PRFQALLDRYGAGRRFICQPGHGLVEAIERGDTN----SPALRTLLERYIQPMLDDGADT 188
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV--FDDHALFL 252
+VL CTHYP R L + +D SD+IAR+ +L
Sbjct: 189 LVLGCTHYPFFTETIRDLVGERLTIVDTSDAIARQLARVLDERGLRAPAGTHAAPPRFCS 248
Query: 253 SGKPDIAMRRLMQGFGLKS 271
+ GL +
Sbjct: 249 TSDGLQLHALASTLLGLDA 267
>gi|167626058|ref|YP_001676352.1| glutamate racemase [Shewanella halifaxensis HAW-EB4]
gi|189030370|sp|B0TMV5|MURI_SHEHH RecName: Full=Glutamate racemase
gi|167356080|gb|ABZ78693.1| glutamate racemase [Shewanella halifaxensis HAW-EB4]
Length = 266
Score = 211 bits (537), Expect = 9e-53, Method: Composition-based stats.
Identities = 81/259 (31%), Positives = 133/259 (51%), Gaps = 8/259 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I+IFDSGIGGL + +++ ++P+ + Y+ D+ PYG E+ L K + L +
Sbjct: 1 MSGPIVIFDSGIGGLSIFDEIKKVLPDQGYCYLFDNARLPYGELEESVLIKGCVDLICEQ 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + VL V+ACN+A TL+ LR+ S+ +G VPAIK AA +++ I +L+T T
Sbjct: 61 VKRIDAVLVVVACNSASTLVLPGLRARL-SIPIVGVVPAIKPAAQISKTRHIGLLATHGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R+YT LI + C + L S L E G K+ + +E +
Sbjct: 120 IKRSYTRELIKEFAGDCKVDLFGSSELVMLAEAKLAGEKLDLIK----LESQLKPIQHSD 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-AL 250
D +VL CTH+P+I +Q+ V LD+ +IA+R LL I + A+
Sbjct: 176 LDTLVLGCTHFPIIADEIQQVLGAGVKLLDSGKAIAQRVSYLLENIEDKLDNSAGELMAI 235
Query: 251 FLSGK--PDIAMRRLMQGF 267
+ + + P +A R +GF
Sbjct: 236 YTTEEITPGLATRLAEKGF 254
>gi|15640188|ref|NP_229815.1| glutamate racemase [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121591662|ref|ZP_01678900.1| glutamate racemase [Vibrio cholerae 2740-80]
gi|147673599|ref|YP_001218240.1| glutamate racemase [Vibrio cholerae O395]
gi|227080392|ref|YP_002808943.1| glutamate racemase [Vibrio cholerae M66-2]
gi|229508432|ref|ZP_04397936.1| glutamate racemase [Vibrio cholerae BX 330286]
gi|229508887|ref|ZP_04398377.1| glutamate racemase [Vibrio cholerae B33]
gi|229517001|ref|ZP_04406447.1| glutamate racemase [Vibrio cholerae RC9]
gi|229606705|ref|YP_002877353.1| glutamate racemase [Vibrio cholerae MJ-1236]
gi|254851543|ref|ZP_05240893.1| glutamate racemase [Vibrio cholerae MO10]
gi|255743894|ref|ZP_05417849.1| glutamate racemase [Vibrio cholera CIRS 101]
gi|262166982|ref|ZP_06034700.1| glutamate racemase [Vibrio cholerae RC27]
gi|298501081|ref|ZP_07010881.1| glutamate racemase [Vibrio cholerae MAK 757]
gi|11386939|sp|Q9KVI7|MURI_VIBCH RecName: Full=Glutamate racemase
gi|172047523|sp|A5F4P4|MURI_VIBC3 RecName: Full=Glutamate racemase
gi|254766132|sp|C3LPZ8|MURI_VIBCM RecName: Full=Glutamate racemase
gi|9654559|gb|AAF93334.1| glutamate racemase [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121546478|gb|EAX56698.1| glutamate racemase [Vibrio cholerae 2740-80]
gi|146315482|gb|ABQ20021.1| glutamate racemase [Vibrio cholerae O395]
gi|227008280|gb|ACP04492.1| glutamate racemase [Vibrio cholerae M66-2]
gi|227011822|gb|ACP08032.1| glutamate racemase [Vibrio cholerae O395]
gi|229346064|gb|EEO11036.1| glutamate racemase [Vibrio cholerae RC9]
gi|229354004|gb|EEO18937.1| glutamate racemase [Vibrio cholerae B33]
gi|229354705|gb|EEO19627.1| glutamate racemase [Vibrio cholerae BX 330286]
gi|229369360|gb|ACQ59783.1| glutamate racemase [Vibrio cholerae MJ-1236]
gi|254847248|gb|EET25662.1| glutamate racemase [Vibrio cholerae MO10]
gi|255738377|gb|EET93767.1| glutamate racemase [Vibrio cholera CIRS 101]
gi|262024566|gb|EEY43249.1| glutamate racemase [Vibrio cholerae RC27]
gi|297540115|gb|EFH76176.1| glutamate racemase [Vibrio cholerae MAK 757]
Length = 265
Score = 211 bits (537), Expect = 9e-53, Method: Composition-based stats.
Identities = 80/265 (30%), Positives = 137/265 (51%), Gaps = 15/265 (5%)
Query: 12 LQNS----ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ + +LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L
Sbjct: 1 MSSPSFPRVLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELTQETLIARVDTL 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ ++++ + L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++
Sbjct: 61 VTRMVEQERIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLIA 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TPAT++R YT LI + + ++ L+ S L + EE G + +E+ ++
Sbjct: 119 TPATVKRQYTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELASILQP----- 173
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
DV VL CTH+PLI +Q+ V +D+ +IARR + LL
Sbjct: 174 LKNTIDVAVLGCTHFPLIKEEIQQVLGEQVQLIDSGLAIARRVQELLGIE--QAVGAKQK 231
Query: 248 HALFLSGKP--DIAMRRLMQGFGLK 270
H ++ S P + A+ ++ G
Sbjct: 232 HRIYASAPPWEESALNIKLEQLGFN 256
>gi|315225613|ref|ZP_07867422.1| glutamate racemase [Capnocytophaga ochracea F0287]
gi|314944430|gb|EFS96470.1| glutamate racemase [Capnocytophaga ochracea F0287]
Length = 269
Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats.
Identities = 58/253 (22%), Positives = 112/253 (44%), Gaps = 9/253 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG + +++ LMP + +++AD+ PYG + + L +
Sbjct: 10 PIGLFDSGVGGTTIWKEVNALMPNENTLFIADNKNAPYGEKTKEEIIALCDAN-TRFLLE 68
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ V+ACNT T LR+ + + F+G PAIK A+ + + I +L+T +TL
Sbjct: 69 NNAKIIVVACNTGTTNAISYLRNKYKEVPFIGIEPAIKPASLQSVTKKIGVLATRSTLAS 128
Query: 135 TYTSNLIHSYVSQCHI--HLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + L +E +IK E+ + + +
Sbjct: 129 DLFAKTSEHLKQEEQVEIIEQVGEGLVDLIE----AGRIKSPEMTLLLRKYLLPMVAEGI 184
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFDDHAL 250
D +VL CTHYP ++ ++L P + +D+ ++A++ R +L + + H
Sbjct: 185 DYLVLGCTHYPYLLPQIQELIPPHIKVIDSGYAVAKQTRNILSQHHLLNDDATAEAQHLW 244
Query: 251 FLSGKPDIAMRRL 263
+GK ++ +
Sbjct: 245 LANGKVEVLQQFA 257
>gi|302876669|ref|YP_003845302.1| glutamate racemase [Clostridium cellulovorans 743B]
gi|307687344|ref|ZP_07629790.1| glutamate racemase [Clostridium cellulovorans 743B]
gi|302579526|gb|ADL53538.1| glutamate racemase [Clostridium cellulovorans 743B]
Length = 259
Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats.
Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 7/241 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I DSG+GGL V+++ +P+ + I+ D PYG D +KK F + L
Sbjct: 6 KPIGFMDSGVGGLSVMKEAIKALPQENLIHFGDSKNAPYGIKTDEEIKKLT-FSAVEFLI 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
K Q VIACNTA ++ ++LR + + +G PA+K A + G I +++TP TL+
Sbjct: 65 KKQCKAIVIACNTATSVAINDLREIYKEVPIIGIEPAVKPAVELNEDGKIIVMATPVTLK 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ ++L+ Y S I + L +E +E+ + F +
Sbjct: 125 KEKFNHLLEMYGSDREIIFLPCPELVELIERGVLEG----EELDNYLLSKFKPYLNDKIS 180
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALFL 252
+VL CTHYP +++ +D S ++ + +L R + + +F
Sbjct: 181 AVVLGCTHYPFAKKAIKKIVGD-AKIIDGSYGTVKQLKNILMRRDELNDSNSKGTIEIFN 239
Query: 253 S 253
S
Sbjct: 240 S 240
>gi|323174290|gb|EFZ59916.1| glutamate racemase [Escherichia coli LT-68]
Length = 262
Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats.
Identities = 81/256 (31%), Positives = 138/256 (53%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GG+ V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 2 LVFDSGVGGVSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y
Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S + E G + D +K+ + KE D +V
Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--DTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTP 238
Query: 257 -DIAMRRLMQGFGLKS 271
+ ++Q +G ++
Sbjct: 239 GAEQLLPVLQRYGFET 254
>gi|134094154|ref|YP_001099229.1| glutamate racemase [Herminiimonas arsenicoxydans]
gi|133738057|emb|CAL61102.1| Glutamate racemase [Herminiimonas arsenicoxydans]
Length = 284
Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats.
Identities = 64/274 (23%), Positives = 113/274 (41%), Gaps = 12/274 (4%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M P + I IFDSG+G L VL+ ++ +P H + AD PYG D +
Sbjct: 1 MSFSATPDPVAAEAPIGIFDSGVGALSVLRHIQARLPSEHLLCFADSGYAPYGGKPDAEI 60
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R + + + +L K + V+ACNTA D LR +P + +G P +K AA +++S
Sbjct: 61 VERTLAIAAFLLTK-KVKAIVVACNTATAAAIDALRQQYPDLIVVGVEPGLKPAAVFSKS 119
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIH--LVSSMILASRVEEYACGIKIKEDEIKK 178
G +L+T +TL L + + + L ++E+ + E
Sbjct: 120 GKAGVLATASTLASHRFIALRDQIAETTGVTFLTQACVGLVEQIEKGE----LSSPETAA 175
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW----PVDWLDNSDSIARRARCLL 234
+E D + L CTHYP + + ++ PV +D ++++R+ LL
Sbjct: 176 MLERYVTPLLRGGADTLALGCTHYPFVQPLIEAIAERESAVPVTIIDTGEAVSRQLERLL 235
Query: 235 PRINTHQ-TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ + + F +G +
Sbjct: 236 QQRGLQRFENMPGSLQAFTTGSQSALEHAFAKLL 269
>gi|170747215|ref|YP_001753475.1| glutamate racemase [Methylobacterium radiotolerans JCM 2831]
gi|170653737|gb|ACB22792.1| glutamate racemase [Methylobacterium radiotolerans JCM 2831]
Length = 291
Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats.
Identities = 98/243 (40%), Positives = 143/243 (58%), Gaps = 2/243 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +IL+FDSG+GGL VL +R P+ ++YV DD FPYG + L R++ + ++
Sbjct: 21 EPTILVFDSGLGGLTVLDAVRRARPDARYVYVGDDAAFPYGRLSEATLVARVLTVMERLV 80
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++P L VIACNTA TL+ LR F + F+G VP IK AA T+S L+++L+TP T+
Sbjct: 81 ATHRPDLVVIACNTASTLVLPALRQRFTT-PFVGVVPPIKPAAEATRSRLVTLLATPGTV 139
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF-IEKEGKR 191
R+YT +LI +Y C + LV S LA E G + + + EI CF E +G+R
Sbjct: 140 ARSYTHDLIATYAGTCAVTLVGSQNLAGFAEAELAGAPVDDAALAAEIAPCFVAEADGRR 199
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
TDV+ LACTHYPL++ + ++PWPV W+D + +IARR L+ R F
Sbjct: 200 TDVVCLACTHYPLLLPRLQAVAPWPVTWIDPAPAIARRVVQLIGPRPREADRHGSALGAF 259
Query: 252 LSG 254
+G
Sbjct: 260 TAG 262
>gi|317504610|ref|ZP_07962579.1| glutamate racemase [Prevotella salivae DSM 15606]
gi|315664281|gb|EFV03979.1| glutamate racemase [Prevotella salivae DSM 15606]
Length = 278
Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats.
Identities = 56/261 (21%), Positives = 104/261 (39%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L +R L+P+Y +IY+ D+ PYG + + L +
Sbjct: 10 PIGVFDSGYGGLTILHGIRQLLPQYDYIYLGDNARAPYGTRSFDVVYQFTRQAVMK-LFE 68
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ CNTA + +++L + PS LG + P + TQ+ + +L+T
Sbjct: 69 LGCHLVILGCNTASAKALRSIQQNDLPNITPSRRVLGVIRPTAEVIGTLTQNNHVGLLAT 128
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ I + + V+ VE + +KK I+ +
Sbjct: 129 EGTVKSHSYELEIKKLWPEIKVTGVACPFWVPLVEYNEADSPGADYFVKKRIDDLM--RR 186
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF--D 246
D I+L CTHYP+++ + V + + +A + L R + ++
Sbjct: 187 DPAIDTIILGCTHYPILMPKIVKYVAPGVRIIPQGEYVAGSLQSYLSRHLDIEQQITQGG 246
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ P+ +
Sbjct: 247 SCRYLTTENPERFKESVQVFL 267
>gi|269103679|ref|ZP_06156376.1| glutamate racemase [Photobacterium damselae subsp. damselae CIP
102761]
gi|268163577|gb|EEZ42073.1| glutamate racemase [Photobacterium damselae subsp. damselae CIP
102761]
Length = 273
Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats.
Identities = 82/255 (32%), Positives = 136/255 (53%), Gaps = 9/255 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
++IFDSG+GGL V Q++R +P+ +IY D+ FPYG L +R + ++++
Sbjct: 10 KKVVIFDSGVGGLSVYQEIRARLPQAQYIYAFDNAAFPYGELPQQVLIERACHIITNLVA 69
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++Q L V+ACNTA T++ LR ++ +G VPAIK AA + S I +L+TPAT+
Sbjct: 70 RHQADLVVVACNTASTIVLPALRQQL-TIPVVGVVPAIKPAAQASLSKSIGLLATPATVE 128
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +L+ + C + ++ + L EE G + +E+ + + + D
Sbjct: 129 RPYTHDLVKQFAQDCQVLMLGTTRLVEMAEEKLQGEVVSLNELTQILAPWLGK-----VD 183
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALFL 252
IVL CTH+PL+ +Q+ V +D+ +IA R LLP T + + D+ +
Sbjct: 184 TIVLGCTHFPLMRAEIQQVCGAGVTIIDSGKAIANRVVSLLPESATQDAALEEMDNLTYC 243
Query: 253 SGKPDI--AMRRLMQ 265
S KP A+ + +Q
Sbjct: 244 SAKPTRLDALNKSLQ 258
>gi|253581900|ref|ZP_04859124.1| glutamate racemase [Fusobacterium varium ATCC 27725]
gi|251836249|gb|EES64786.1| glutamate racemase [Fusobacterium varium ATCC 27725]
Length = 263
Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 59/262 (22%), Positives = 97/262 (37%), Gaps = 9/262 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ SI +FDSG+GG VL+ M ++P + IY AD PYG L+ +
Sbjct: 1 MTKEYSIGVFDSGVGGTTVLKIMAEILPHENIIYYADSGNAPYGKKTVEELQSLCFNIMD 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L + VIACNTA ++ + P K AA +++G I++L+TP
Sbjct: 61 FFLKN-RCKAVVIACNTATAAALTAIKERYDIPVIGVINPGAKAAANMSKNGHIAVLATP 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T I + ++ L + +EE + + D + I
Sbjct: 120 FTANSNAYGEEIKKISKKVSVYQEGCSELCTMIEEGWENFENRGDILDGHISQF-----P 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDH 248
D +VL CTHYP+I + +D + L +
Sbjct: 175 GSADTLVLGCTHYPIIKEDIEKYFSG--KIVDPAKETVIELVEALRDDDLLNDSKDRGKI 232
Query: 249 ALFLSGKPDIAMRRLMQGFGLK 270
F+SG + + + G +
Sbjct: 233 EFFVSGNKEQFRKIAEKFLGFE 254
>gi|229525050|ref|ZP_04414455.1| glutamate racemase [Vibrio cholerae bv. albensis VL426]
gi|229338631|gb|EEO03648.1| glutamate racemase [Vibrio cholerae bv. albensis VL426]
Length = 265
Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 81/259 (31%), Positives = 135/259 (52%), Gaps = 11/259 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + +++
Sbjct: 7 PRVLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELTQETLIARVDTLVTRMVE 66
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ + L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +L+TPAT++
Sbjct: 67 QERIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLLATPATVK 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT LI + + ++ L+ S L + EE G + +E+ ++ D
Sbjct: 125 RQYTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELASILQP-----LKNTID 179
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
V VL CTH+PLI +Q+ V +D+ +IARR + LL H ++ S
Sbjct: 180 VAVLGCTHFPLIKEEIQQVLGDQVQLIDSGLAIARRVQELLGVEKGV--GTNQKHQIYAS 237
Query: 254 GKP--DIAMRRLMQGFGLK 270
P + A+ ++ G
Sbjct: 238 APPWEESALNINLEQLGFN 256
>gi|154488995|ref|ZP_02029844.1| hypothetical protein BIFADO_02305 [Bifidobacterium adolescentis
L2-32]
gi|154083132|gb|EDN82177.1| hypothetical protein BIFADO_02305 [Bifidobacterium adolescentis
L2-32]
Length = 258
Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 60/260 (23%), Positives = 102/260 (39%), Gaps = 7/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I +FDSG+GG+ V +++R MP H +Y D PYG +++ +
Sbjct: 1 MASTAPIGVFDSGLGGISVAREIRRDMPNEHVLYFGDSANAPYGTKSPEQVRELS-DVIV 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--S 127
+ VIACNTA + +ELR T+ + +G PA+K A ++ +
Sbjct: 60 KRFVEQGVKAVVIACNTATSAAANELRDTY-DIPIIGMEPALKVACDRGHGKRQHVIVAA 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TP TLR + L+ + + I L VE D + + + F +
Sbjct: 119 TPLTLRERKFAVLMDRFKADHTIFPEPCPGLVEIVEHGQLD---DHDVVMRTLHQYFDQY 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+ D +VL CTH+ FR+L P +D ++ R +L + +
Sbjct: 176 DLSTIDSVVLGCTHFVFYRDYFRELLPDTAAIIDGNEGTVRHLGVVLESLGKLAPEDAEG 235
Query: 248 HALFLSGKPDIAMRRLMQGF 267
+ + +L Q
Sbjct: 236 SIDLANSDTSARIAQLAQSL 255
>gi|301062755|ref|ZP_07203367.1| glutamate racemase [delta proteobacterium NaphS2]
gi|300443162|gb|EFK07315.1| glutamate racemase [delta proteobacterium NaphS2]
Length = 272
Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 64/260 (24%), Positives = 104/260 (40%), Gaps = 13/260 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL +L +PEY ++Y+ D PYGN + L
Sbjct: 2 IGVFDSGFGGLTILGAFLKSLPEYDYLYLGDSARTPYGNKSQEVIYNYTRQAV-RFLFSK 60
Query: 76 QPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTP 129
VL ++ACNTA T + ++ L P+ LG V P + A A T+ G I ++ T
Sbjct: 61 GCVLIILACNTASTKALRKIQQEWLPENHPNRRVLGVVIPLAESAVASTRYGRIGVIGTQ 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ I I + +L VE + + E ++ +
Sbjct: 121 ATIDSRVYEEEIRKLNPGVKIFTQACPLLVPLVE----EGWVGKPESNMILKKYLSRLKR 176
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH- 248
K+ D ++L CTHY + ++ L+ + IA + + L R +TR+ D+
Sbjct: 177 KQIDTLILGCTHYSFLEKDIARIMGKNCRVLNGPEIIAAKLKDYLNRHPEIETRIPDNRN 236
Query: 249 -ALFLSGKPDIAMRRLMQGF 267
A + P +
Sbjct: 237 LACCTTDDPLKFQIVGEKFL 256
>gi|149192517|ref|ZP_01870697.1| glutamate racemase [Vibrio shilonii AK1]
gi|148833649|gb|EDL50706.1| glutamate racemase [Vibrio shilonii AK1]
Length = 266
Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 73/261 (27%), Positives = 127/261 (48%), Gaps = 12/261 (4%)
Query: 12 LQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ ILIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R L
Sbjct: 1 MNRKNILIFDSGVGGLSVFKEIVQRLPQENYIYLFDNEAYPYGELAPETLVNRTCTLIQQ 60
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ + + VIACNTA T++ LR + +G VPAIK A+ +++ + +++TPA
Sbjct: 61 MMRRKAVDIVVIACNTASTIVLPHLRKRI-DIPVVGVVPAIKPASLLSKTA-VGLIATPA 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ R YT +LI ++ + + L+ L E+ ++ E++ +
Sbjct: 119 TITRQYTHDLIRNFATDKEVKLIGDSRLVEMAEQKLRNEQVDLQELELILSP-----IKG 173
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
+ DV VL CTH+PLI + V+ +D+ +IARR LL +
Sbjct: 174 KIDVAVLGCTHFPLIKEEIALVLGDCVELVDSGAAIARRVESLLEIKE--ASLGQGTMEA 231
Query: 251 FLSGKP--DIAMRRLMQGFGL 269
F S P + A+ + ++
Sbjct: 232 FSSAPPFEEEALNKTLRQLCF 252
>gi|189462010|ref|ZP_03010795.1| hypothetical protein BACCOP_02682 [Bacteroides coprocola DSM 17136]
gi|189431224|gb|EDV00209.1| hypothetical protein BACCOP_02682 [Bacteroides coprocola DSM 17136]
Length = 276
Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 55/261 (21%), Positives = 99/261 (37%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L K+R L+P+Y +IY+ D+ PYG + + + L
Sbjct: 7 PIGVFDSGYGGLTILDKIRELLPQYDYIYLGDNARTPYGTRSFEVVYEFTLQAVRK-LFD 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLG------AVPAIKQAAAYTQSGLISILST 128
L ++ACNTA ++ P + T S + +L+T
Sbjct: 66 LGCPLVILACNTASAKALRSIQENDLPHIDATRRVLGVIRPTAECIGDITVSRHVGLLAT 125
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ +H + V+ + VE + +++ I +
Sbjct: 126 AGTVKSQSYPIELHKLFPDIQLTGVACPLWVPLVENNEFNSPGADYFVQEYINQLLEQ-- 183
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFD 246
+ D I+L CTHYPL++ RQ +P + + + +A + L R + +TR
Sbjct: 184 DPKIDTIILGCTHYPLLIEKIRQFTPPHIRLVAQGEYVAASLKDYLRRHSEIRTRCTAGG 243
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ +
Sbjct: 244 TCEFLTTESVEKFQEAASIFL 264
>gi|156972605|ref|YP_001443512.1| glutamate racemase [Vibrio harveyi ATCC BAA-1116]
gi|166231065|sp|A7MXD3|MURI_VIBHB RecName: Full=Glutamate racemase
gi|156524199|gb|ABU69285.1| hypothetical protein VIBHAR_00256 [Vibrio harveyi ATCC BAA-1116]
Length = 268
Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 83/260 (31%), Positives = 133/260 (51%), Gaps = 9/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L+FDSG+GGL V Q++ L+P ++Y+ D+ +PYG + L R+ L + ++
Sbjct: 6 KKKVLVFDSGVGGLSVFQEIHRLLPHMDYLYLFDNEAYPYGELDQDVLITRVNKLVAALV 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+++Q + VIACNTA T++ LR+ S+ +G VPAIK A+ S + +++TPAT+
Sbjct: 66 EEHQADIVVIACNTASTIVLPSLRANL-SIPVVGVVPAIKPASLL-ASQGVGLIATPATV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R YT LI + + L+ S L EE G I E +E + K
Sbjct: 124 TRQYTHELIRDFAQGKPVELLGSTRLVDMAEEKLRGESISLSE----LESILLPLRNK-V 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
DV VL CTH+PLI Q V +D+ ++IARR + LL ++R ++
Sbjct: 179 DVAVLGCTHFPLIKEEIHQALGGEVTLVDSGEAIARRVKALLLNAMKQESREEGSKKIYA 238
Query: 253 SGKP--DIAMRRLMQGFGLK 270
S P + A+ + G
Sbjct: 239 SAPPWQEDALNTCLANLGFN 258
>gi|153826314|ref|ZP_01978981.1| glutamate racemase [Vibrio cholerae MZO-2]
gi|149739982|gb|EDM54161.1| glutamate racemase [Vibrio cholerae MZO-2]
Length = 265
Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 81/259 (31%), Positives = 136/259 (52%), Gaps = 11/259 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + +++
Sbjct: 7 PRVLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELTQETLIARVDTLVTRMVE 66
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ + L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++
Sbjct: 67 QERIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLIATPATVK 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT LI + + ++ L+ S L + EE G + +E+ ++ D
Sbjct: 125 RQYTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELASILQP-----LKNTID 179
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
V VL CTH+PLI +Q+ V +D+ +IARR + LL T H ++ S
Sbjct: 180 VAVLGCTHFPLIKEEIQQVLGDQVQLIDSGLAIARRVQELLGVEKGVDTNQ--KHQIYAS 237
Query: 254 GKP--DIAMRRLMQGFGLK 270
P + A+ ++ G
Sbjct: 238 APPWEESALNINLEQLGFN 256
>gi|295425843|ref|ZP_06818523.1| glutamate racemase [Lactobacillus amylolyticus DSM 11664]
gi|295064446|gb|EFG55374.1| glutamate racemase [Lactobacillus amylolyticus DSM 11664]
Length = 267
Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 55/256 (21%), Positives = 99/256 (38%), Gaps = 7/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I + DSG GG V++K+ +PE I++ D+ PYG+ + + + +L
Sbjct: 3 NRPIGLLDSGDGGFSVVKKVIKKLPEESTIFIGDNAHMPYGDKSKEEVIELTRHSVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L + ACNTA ++ A T++ +++ +TP T+
Sbjct: 63 SR-DVKLIIFACNTATAAAMSTIQKEIKPQIIGVIQSGSLAAVRTTENKKVAVSATPVTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
N I + + +++ LA VE + + ++ +GK
Sbjct: 122 ASHAYKNEIQVRDPEIEVTELATPKLAPLVEAEE-----DYNTNLRVVKESLKPLQGKDF 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHALF 251
D VL CTHYPLI F + P V +D +D +A+ ++ R H +
Sbjct: 177 DTFVLGCTHYPLIQKEFEEALPDNVSIVDPADQVAQYTFNVMRRDGLFAAPGSVARHEYY 236
Query: 252 LSGKPDIAMRRLMQGF 267
+G + R
Sbjct: 237 TTGDVEKFERMGQSFL 252
>gi|262273148|ref|ZP_06050964.1| glutamate racemase [Grimontia hollisae CIP 101886]
gi|262222726|gb|EEY74035.1| glutamate racemase [Grimontia hollisae CIP 101886]
Length = 263
Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats.
Identities = 90/261 (34%), Positives = 134/261 (51%), Gaps = 9/261 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
S+LIFDSG+GGL V +++ L+PE H +Y D+ FPYG D L +R+ + + +
Sbjct: 2 KSVLIFDSGVGGLSVYKEIAQLLPEQHIVYAFDNAAFPYGELADDILIQRVCGMVASLCH 61
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L VIACNTA TL+ LRS S+ +G VPAIK AAA +++ I +L+TPAT+
Sbjct: 62 ELDIALVVIACNTASTLVLPHLRSLL-SIPVVGVVPAIKPAAAMSKTKHIGLLATPATVN 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
RTYT L+ + CH+ +V S L E GI + + +K+ + +TD
Sbjct: 121 RTYTKQLVEEFAPDCHVEMVGSTELVQMGEGKLRGIPVDKKILKQVLMPFI-----NKTD 175
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
IVL CTH+PL+ ++ +D+ +IA R LL T D L S
Sbjct: 176 CIVLGCTHFPLLRDEIEEILGDQCLVIDSGKAIANRVDTLLKERGALSTSFRDKKHLAFS 235
Query: 254 GKP---DIAMRRLMQGFGLKS 271
P + A+ + G +
Sbjct: 236 SAPVKDEEALNNELGKLGFSA 256
>gi|153217406|ref|ZP_01951157.1| glutamate racemase [Vibrio cholerae 1587]
gi|124113576|gb|EAY32396.1| glutamate racemase [Vibrio cholerae 1587]
Length = 265
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 80/265 (30%), Positives = 137/265 (51%), Gaps = 15/265 (5%)
Query: 12 LQNS----ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ + +LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L
Sbjct: 1 MSSPSFPRVLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELTQETLIARVDTL 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ ++++ + L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++
Sbjct: 61 VTRMVEQERIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLIA 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TPAT++R YT LI + + ++ L+ S L + EE G + +E+ ++
Sbjct: 119 TPATVKRQYTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELASILQP----- 173
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
DV VL CTH+PLI +Q+ V +D+ +IARR + LL
Sbjct: 174 LKNTIDVAVLGCTHFPLIKEEIQQVLGDQVQLIDSGLAIARRVQELLGVEKGV--GTNQK 231
Query: 248 HALFLSGKP--DIAMRRLMQGFGLK 270
H ++ S P + A+ ++ G
Sbjct: 232 HQIYASAPPWEESALNINLEQLGFN 256
>gi|192359030|ref|YP_001982653.1| glutamate racemase [Cellvibrio japonicus Ueda107]
gi|190685195|gb|ACE82873.1| glutamate racemase [Cellvibrio japonicus Ueda107]
Length = 279
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 86/250 (34%), Positives = 132/250 (52%), Gaps = 2/250 (0%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
IL+FDSG+GGL V Q+++ +P IY +D+ FPYG E+ L R+ + + +L
Sbjct: 14 PRILVFDSGVGGLSVAQEIQASLPGVALIYASDNAAFPYGTKEEGELIARVERVMAALLA 73
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
Y L V+ACNTA TL LR F ++ F+G VPAIK AA +QSG+I +L+TPAT+
Sbjct: 74 SYPVDLVVVACNTASTLTLPHLRQRF-NLPFVGVVPAIKPAAESSQSGVIGLLATPATVA 132
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT +LI ++ S C + + S L E+ G I + I + ++ D
Sbjct: 133 RPYTHDLITTHASDCTVISLGSSELVLLAEQKLRGETITDKAIAPITQALLDADGSRQMD 192
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHALFL 252
+VLACTH+PL+ + P + +D+ +IARR + LL + + +H
Sbjct: 193 RLVLACTHFPLLREELGRNLPQRIQLIDSGAAIARRVKHLLEAQQRLARLPDTPEHIAVF 252
Query: 253 SGKPDIAMRR 262
+ + R
Sbjct: 253 TQETQEVHRL 262
>gi|119026186|ref|YP_910031.1| glutamate racemase [Bifidobacterium adolescentis ATCC 15703]
gi|166231027|sp|A1A2L6|MURI_BIFAA RecName: Full=Glutamate racemase
gi|118765770|dbj|BAF39949.1| glutamate racemase [Bifidobacterium adolescentis ATCC 15703]
Length = 258
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 60/260 (23%), Positives = 102/260 (39%), Gaps = 7/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I +FDSG+GG+ V +++R MP H +Y D PYG +++ +
Sbjct: 1 MASTAPIGVFDSGLGGISVAREIRRDMPNEHVLYFGDSANAPYGTKSPEQVRELS-DVIV 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--S 127
+ VIACNTA + +ELR T+ + +G PA+K A ++ +
Sbjct: 60 KRFVEQGVKAVVIACNTATSAAANELRDTY-DIPIIGMEPALKVACDRGHGKRQRVIVAA 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TP TLR + L+ + + I L VE D + + + F +
Sbjct: 119 TPLTLRERKFAVLMDRFKADHTIFPEPCPGLVEIVEHGQLD---DHDVVMRTLHQYFDQY 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+ D +VL CTH+ FR+L P +D ++ R +L + +
Sbjct: 176 DLSTIDSVVLGCTHFVFYRDYFRELLPDTAAIIDGNEGTVRHLGVVLESLGKLAPEDAEG 235
Query: 248 HALFLSGKPDIAMRRLMQGF 267
+ + +L Q
Sbjct: 236 SIDLANSDTSARIAQLAQSL 255
>gi|152980748|ref|YP_001352569.1| glutamate racemase [Janthinobacterium sp. Marseille]
gi|151280825|gb|ABR89235.1| glutamate racemase [Janthinobacterium sp. Marseille]
Length = 284
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 68/276 (24%), Positives = 114/276 (41%), Gaps = 16/276 (5%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M YP I IFDSG+G L VL+ ++ +P H + AD PYG D A+
Sbjct: 1 MSFSAYPDPVAADAPIGIFDSGVGALSVLRHIQARLPSEHLLCFADSGYAPYGGKSDAAI 60
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R + + + L V+ACNTA + LR +P + +G P +K AA +++S
Sbjct: 61 IERTLDIAA-FLTTKNIKAIVVACNTATAAAIEALRQHYPQLIIVGVEPGLKPAAVFSKS 119
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIH--LVSSMILASRVEEYACGIKIKEDEIKK 178
G +L+T +TL + L + I + + L ++E+ + E
Sbjct: 120 GKAGVLATASTLASSRFIALRDQISTSTGITFLTQACVGLVEQIEKGE----LDSTETIA 175
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW----PVDWLDNSDSIARRARCLL 234
+E D + L CTHYP + ++ PV +D ++++R+ LL
Sbjct: 176 MLERYVTPLLRGGADTLALGCTHYPFVQPAIEVIAQRESAVPVTIIDTGEAVSRQLERLL 235
Query: 235 PRINTHQ-TRVFDDHALFLSGKPD----IAMRRLMQ 265
+ + F +G D + L Q
Sbjct: 236 QQRGLQRFETTAGSLQAFTTGNRDALVAAFAKLLNQ 271
>gi|327312842|ref|YP_004328279.1| glutamate racemase [Prevotella denticola F0289]
gi|326944421|gb|AEA20306.1| glutamate racemase [Prevotella denticola F0289]
Length = 279
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 57/261 (21%), Positives = 103/261 (39%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L +R L+PEY ++Y+ D+ PYG+ + + L
Sbjct: 10 PIGVFDSGYGGLTILHGIRQLLPEYDYVYLGDNARAPYGSRSFDIVYQFTRQAVMK-LFG 68
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ CNTA + +++L + P LG + P + T+S + +L+T
Sbjct: 69 LGCQLVILGCNTASAKALRTIQQNDLPALDPDRRVLGVIRPTAEIIGRLTRSRHVGLLAT 128
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+R + I + V + +E + +KK I+ I +
Sbjct: 129 EGTVRSNSYNLEIRKLWPDIKVTGVPCPLWVPIIENNEADSPGADYFVKKRIDH--IMRI 186
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFD 246
+ D ++L CTHYP+++ + P V + + +A R L R +
Sbjct: 187 DPQIDCLILGCTHYPILMPKILKHVPCGVRIIPQGEYVAESLRDYLRRHPDMDARCTKQS 246
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ P+
Sbjct: 247 TVKYLTTENPEKFKETARIFL 267
>gi|253681134|ref|ZP_04861937.1| glutamate racemase [Clostridium botulinum D str. 1873]
gi|253562983|gb|EES92429.1| glutamate racemase [Clostridium botulinum D str. 1873]
Length = 257
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 67/256 (26%), Positives = 112/256 (43%), Gaps = 6/256 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I FDSG+GGL VL++ ++P FIY D PYG + +KK +L
Sbjct: 7 PIGFFDSGVGGLSVLKEAIKILPNEDFIYYGDSKNAPYGTKKVDEVKKLTFDAV-KVLLG 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
Y V+ACNTA + ++LR+T+ M +G PA+K A + G I I++T TL
Sbjct: 66 YNVKAIVVACNTATSAAIEDLRNTYKDMPIIGIEPALKPAVELSGDGKIVIMATNMTLAE 125
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ L+ Y +C I + L +E+ ++ ++K+ + + +
Sbjct: 126 KKFNKLMSKYKDKCDIVSLPCPGLVEYIEKGI----VEGKKLKEFLVEKLSILDKDKIAS 181
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALFLS 253
+VL CTHYP I + V +D S A + + L + N+ + S
Sbjct: 182 VVLGCTHYPFIKKELYSILGDEVVIIDGSFGTANQLKRKLIKSNSINKENKKGKITILNS 241
Query: 254 GKPDIAMRRLMQGFGL 269
K D ++ + +
Sbjct: 242 LKDDEIIKISKKLLCI 257
>gi|262201908|ref|YP_003273116.1| glutamate racemase [Gordonia bronchialis DSM 43247]
gi|262085255|gb|ACY21223.1| glutamate racemase [Gordonia bronchialis DSM 43247]
Length = 254
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 55/249 (22%), Positives = 100/249 (40%), Gaps = 9/249 (3%)
Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82
+GGL V + + L+P+ +Y+ D PYG +++ + + D L VI
Sbjct: 1 MGGLTVARAIIDLLPDEDIVYIGDTANGPYGPLTIPEIRRHALAIGDD-LAARGVKAIVI 59
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
ACNTA + R + + + V PA+++A T++G I ++ T AT+ +
Sbjct: 60 ACNTASAACLRDARERYAPIPVVEVVLPAVRRAVVATKTGRIGVIGTEATIASRAYQDSF 119
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTH 201
+ I V+ VE + +I +G + D +VL CTH
Sbjct: 120 AA-ARDAVITAVACPRFVDFVERGITSGR----QILGLAQGYLEPLQEAGVDTVVLGCTH 174
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF--DDHALFLSGKPDIA 259
YPL+ V + V + +++ A+ +L + + D +G P+
Sbjct: 175 YPLLSGVIQLAMGDEVTLVSSAEETAKDLFRVLTEADLLHSHSDRVADRVFQATGDPEFF 234
Query: 260 MRRLMQGFG 268
R + G
Sbjct: 235 ARLSSRFLG 243
>gi|328472462|gb|EGF43328.1| glutamate racemase [Vibrio parahaemolyticus 10329]
Length = 270
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 81/260 (31%), Positives = 133/260 (51%), Gaps = 10/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L+FDSG+GGL V Q++ L+P + Y+ D+ +PYG + + L R+ L S ++
Sbjct: 6 KKKVLVFDSGVGGLSVFQEIHQLLPHLDYFYLFDNEAYPYGELDQNVLISRVNQLVSALV 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + VIACNTA T++ LR S+ +G VPAIK A+ + + +++TPAT+
Sbjct: 66 AEHHIDIVVIACNTASTIVLPSLRDNL-SVPVVGVVPAIKPASLL-ATQGVGLIATPATV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R YT LI + + L+ S L EE G + DE+K + +
Sbjct: 124 TRQYTHELIRDFAQGKPVELLGSTRLVDMAEEKLRGESVPLDELKSILSPLC-----NKV 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
DV VL CTH+PLI + +Q+ V +D+ ++IARR + LL + + +F
Sbjct: 179 DVAVLGCTHFPLIKNEIQQVLGSNVVLIDSGEAIARRVKALLS-CGELEEKEEGIKRIFA 237
Query: 253 SGKP--DIAMRRLMQGFGLK 270
S P + A+ + G
Sbjct: 238 SAPPWQEDALNICLAKLGFN 257
>gi|59713040|ref|YP_205816.1| glutamate racemase [Vibrio fischeri ES114]
gi|75431448|sp|Q5E218|MURI_VIBF1 RecName: Full=Glutamate racemase
gi|59481141|gb|AAW86928.1| glutamate racemase [Vibrio fischeri ES114]
Length = 262
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 81/261 (31%), Positives = 131/261 (50%), Gaps = 9/261 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ ILIFDSGIGGL V +++++ +P +IY D+ FPYG + L +R + S +
Sbjct: 1 MPKHILIFDSGIGGLSVYKEIKYQLPLAKYIYAFDNAAFPYGELTESVLIERTTHIISKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
K+ + VIACNTA T++ LR + +G VPAIK AA + I +L+TPAT
Sbjct: 61 CSKFPIDIVVIACNTASTVVLPSLREKL-DIPVVGVVPAIKPAALVSNK--IGLLATPAT 117
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R+YT +LI S+ + L+ S L EE GI + E+K+ + +
Sbjct: 118 VKRSYTYDLIKSFAPISDVQLLGSTRLVEMAEEKMIGIDVDITELKEILSPW-----QNK 172
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D IVL CTH+P + + ++ + +D+ ++IARR + LL +F+
Sbjct: 173 VDTIVLGCTHFPFLKNEIKKALGNKILLIDSGEAIARRVKQLLNGDEVESAVLFEGEVFC 232
Query: 252 -LSGKPDIAMRRLMQGFGLKS 271
+ A+ + S
Sbjct: 233 SAPSIKEEALNHTFKELNFSS 253
>gi|28899710|ref|NP_799315.1| glutamate racemase [Vibrio parahaemolyticus RIMD 2210633]
gi|260361662|ref|ZP_05774689.1| glutamate racemase [Vibrio parahaemolyticus K5030]
gi|260879377|ref|ZP_05891732.1| glutamate racemase [Vibrio parahaemolyticus AN-5034]
gi|260897204|ref|ZP_05905700.1| glutamate racemase [Vibrio parahaemolyticus Peru-466]
gi|260901359|ref|ZP_05909754.1| glutamate racemase [Vibrio parahaemolyticus AQ4037]
gi|33301374|sp|Q87KP1|MURI_VIBPA RecName: Full=Glutamate racemase
gi|28807962|dbj|BAC61199.1| glutamate racemase [Vibrio parahaemolyticus RIMD 2210633]
gi|308089317|gb|EFO39012.1| glutamate racemase [Vibrio parahaemolyticus Peru-466]
gi|308092828|gb|EFO42523.1| glutamate racemase [Vibrio parahaemolyticus AN-5034]
gi|308108436|gb|EFO45976.1| glutamate racemase [Vibrio parahaemolyticus AQ4037]
gi|308111294|gb|EFO48834.1| glutamate racemase [Vibrio parahaemolyticus K5030]
Length = 270
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 81/260 (31%), Positives = 133/260 (51%), Gaps = 10/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L+FDSG+GGL V Q++ L+P + Y+ D+ +PYG + + L R+ L S ++
Sbjct: 6 KKKVLVFDSGVGGLSVFQEIHQLLPHLDYFYLFDNEAYPYGELDQNVLISRVNQLVSALV 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + VIACNTA T++ LR S+ +G VPAIK A+ + + +++TPAT+
Sbjct: 66 AEHHIDIVVIACNTASTIVLPSLRDNL-SVPVVGVVPAIKPASLL-ATQGVGLIATPATV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R YT LI + + L+ S L EE G + DE+K + +
Sbjct: 124 TRQYTHELIRDFAQGKPVELLGSTRLVDMAEEKLRGESVPLDELKSILSPLC-----NKV 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
DV VL CTH+PLI + +Q+ V +D+ ++IARR + LL + + +F
Sbjct: 179 DVAVLGCTHFPLIKNEIQQVLGSNVVLIDSGEAIARRVKALLS-CGELEEKEEGIKRIFA 237
Query: 253 SGKP--DIAMRRLMQGFGLK 270
S P + A+ + G
Sbjct: 238 SAPPWQEDALNICLAKLGFN 257
>gi|153803564|ref|ZP_01958150.1| glutamate racemase [Vibrio cholerae MZO-3]
gi|153831286|ref|ZP_01983953.1| glutamate racemase [Vibrio cholerae 623-39]
gi|229512363|ref|ZP_04401839.1| glutamate racemase [Vibrio cholerae TMA 21]
gi|229527102|ref|ZP_04416496.1| glutamate racemase [Vibrio cholerae 12129(1)]
gi|254292226|ref|ZP_04962991.1| glutamate racemase [Vibrio cholerae AM-19226]
gi|297581776|ref|ZP_06943697.1| glutamate racemase [Vibrio cholerae RC385]
gi|124120901|gb|EAY39644.1| glutamate racemase [Vibrio cholerae MZO-3]
gi|148873230|gb|EDL71365.1| glutamate racemase [Vibrio cholerae 623-39]
gi|150421862|gb|EDN13844.1| glutamate racemase [Vibrio cholerae AM-19226]
gi|229335333|gb|EEO00816.1| glutamate racemase [Vibrio cholerae 12129(1)]
gi|229350618|gb|EEO15562.1| glutamate racemase [Vibrio cholerae TMA 21]
gi|297533870|gb|EFH72710.1| glutamate racemase [Vibrio cholerae RC385]
gi|327483054|gb|AEA77461.1| Glutamate racemase [Vibrio cholerae LMA3894-4]
Length = 265
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 80/259 (30%), Positives = 135/259 (52%), Gaps = 11/259 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + +++
Sbjct: 7 PRVLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELTQETLIARVDTLVTRMVE 66
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ + L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++
Sbjct: 67 QERIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLIATPATVK 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT LI + + ++ L+ S L + EE G + +E+ ++ D
Sbjct: 125 RQYTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELASILQP-----LKNTID 179
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
V VL CTH+PLI +Q+ V +D+ +IARR + LL H ++ S
Sbjct: 180 VAVLGCTHFPLIKEEIQQVLGDQVQLIDSGLAIARRVQELLGVEKGV--GTNQKHQIYAS 237
Query: 254 GKP--DIAMRRLMQGFGLK 270
P + A+ ++ G
Sbjct: 238 APPWEESALNINLEQLGFN 256
>gi|227544196|ref|ZP_03974245.1| glutamate racemase [Lactobacillus reuteri CF48-3A]
gi|300908191|ref|ZP_07125657.1| glutamate racemase [Lactobacillus reuteri SD2112]
gi|227185832|gb|EEI65903.1| glutamate racemase [Lactobacillus reuteri CF48-3A]
gi|300894618|gb|EFK87974.1| glutamate racemase [Lactobacillus reuteri SD2112]
Length = 267
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 54/255 (21%), Positives = 103/255 (40%), Gaps = 6/255 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL V++ +R +P+ I+V D FPYG +++ + + L
Sbjct: 3 KRPIGVMDSGLGGLSVIRVLREQLPQESVIFVGDQGHFPYGTKTKEQIQQLALRI-GKFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + +IACNTA L++ P + +G + AA I ++ T +T+
Sbjct: 62 LEQDVKMMIIACNTATAAALRLLQNELP-IPVIGVIEPGAMAATQHHYKKIGVIGTESTI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + + + L S VE G E +K ++ + +
Sbjct: 121 KNGAYAKTLAKLNPDLSVISSPAQPLVSIVEHGQTG----TSEAQKAVDTELEVFDNQSI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
+ ++L CTH+P + V +D + R+A+ LL N + L+
Sbjct: 177 EALILGCTHFPFLQKEIHNKLGSNVQLIDPAFETIRQAKELLTGKNQLSDNLASSINLYS 236
Query: 253 SGKPDIAMRRLMQGF 267
+G + Q
Sbjct: 237 TGDAKDLVAGAQQWL 251
>gi|33152892|ref|NP_874245.1| glutamate racemase [Haemophilus ducreyi 35000HP]
gi|71151975|sp|Q7VKJ3|MURI_HAEDU RecName: Full=Glutamate racemase
gi|33149117|gb|AAP96634.1| glutamate racemase [Haemophilus ducreyi 35000HP]
Length = 265
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 79/261 (30%), Positives = 124/261 (47%), Gaps = 7/261 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +IL++DSG+GGL V ++R +P H++Y D+ FPY L +R + +
Sbjct: 1 MKPTILLYDSGMGGLTVYDEIRKKLPNAHYLYYFDNACFPYSEKPTEVLVERATKMVQKM 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
Y L V+ACNTA T++ LR FP +G VPAIK AAA +Q+ I +L+T T
Sbjct: 61 AKNYPLDLVVVACNTASTVVLPTLRKIFP-FPIVGTVPAIKPAAALSQTKTIGLLATKGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R Y +LI Y C I + S L VE+ I + I +
Sbjct: 120 ITRPYVLSLIEQYAPNCQIEKIGSTALVELVEQKLQTGVIDLTRLTPIIADW---QNHPT 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL--PRINTHQTRVFDDHA 249
D ++L CTH+P+ +QL P +LD+ ++IA R L+ N + ++ A
Sbjct: 177 LDTVILGCTHFPMAKTELQQLLPNVKYFLDSGNAIANRVTHLIMHSPHNQQLEKQRENLA 236
Query: 250 LFLSGKPD-IAMRRLMQGFGL 269
++MQ +G
Sbjct: 237 FCTQQNNQFKQQAKIMQRWGF 257
>gi|325268397|ref|ZP_08135029.1| glutamate racemase [Prevotella multiformis DSM 16608]
gi|324989251|gb|EGC21202.1| glutamate racemase [Prevotella multiformis DSM 16608]
Length = 279
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 58/261 (22%), Positives = 104/261 (39%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L +R L+PEY +IY+ D+ PYG+ + + L
Sbjct: 10 PIGVFDSGYGGLTILHGIRQLLPEYDYIYLGDNARAPYGSRSFDIVYQFTRQAVMK-LFG 68
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ CNTA + +++L + P LG + P + T+S + +L+T
Sbjct: 69 LGCQLVILGCNTASAKALRTIQQNDLPALDPDRRVLGVIRPTAEIIGRLTRSRHVGLLAT 128
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+R + I + V + +E + +KK I+ I +
Sbjct: 129 EGTVRSNSYNLEIRKLWPDIKVTGVPCPLWVPIIENNEADSPGADYFVKKRIDH--IMRI 186
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFD 246
+ D ++L CTHYP+++ + +P V + + +A R L R +
Sbjct: 187 DPQIDSLILGCTHYPILMPKILKHAPHGVRIIPQGEYVAESLRDYLRRHPDMDARCTKHS 246
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ P+
Sbjct: 247 TAKYLTTENPEKFKETARIFL 267
>gi|299143433|ref|ZP_07036513.1| glutamate racemase [Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298517918|gb|EFI41657.1| glutamate racemase [Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 278
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 52/259 (20%), Positives = 96/259 (37%), Gaps = 13/259 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSGIGGL VL++ ++ + FIY D PYG ++K F L
Sbjct: 5 DRPIGVFDSGIGGLSVLKEAINILTDEKFIYFGDTARIPYGIRTPEEIEKFTEESFE-FL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K +IACNTA + + F P+ + T++ +++L+T T+
Sbjct: 64 KKQGVKAGIIACNTATCYGLETVSKRFDFPIIGVVTPSCEAVHKITENKNVALLATQGTV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ V L +E I ++ ++K IE E
Sbjct: 124 NSKVYDEHFFDIDPFVDLRSVGCPDLVVAIE----NGHIDDEYVEKIIEKYLNEINEFDY 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPW---PVDWLDNSDSIARRARCLLPRINT-----HQTRV 244
D ++L CTH+P ++ V+ +D + + A + +L + ++
Sbjct: 180 DTLILGCTHFPHARKAIERVLNKSNRKVNLVDPARTTALDLKAILEKEGLLKGNCLESEN 239
Query: 245 FDDHALFLSGKPDIAMRRL 263
+ + + +
Sbjct: 240 DSKIVFYTTANIEKFKKTA 258
>gi|160892852|ref|ZP_02073641.1| hypothetical protein CLOL250_00382 [Clostridium sp. L2-50]
gi|156865411|gb|EDO58842.1| hypothetical protein CLOL250_00382 [Clostridium sp. L2-50]
Length = 259
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 66/243 (27%), Positives = 107/243 (44%), Gaps = 6/243 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I IFDSGIGG+ VL+++ LMPE ++IY D PYG + ++
Sbjct: 4 NSRPIGIFDSGIGGISVLKEIVALMPEENYIYYGDSAHAPYGTRQVADIQNLSRSCVE-F 62
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L ++ VIACNTA + LR+ +P + +G PA+K A + + I++++TP T
Sbjct: 63 LLEHDAKAIVIACNTATSAAAAMLRADYPDIPVIGIEPALKPAVLWKEHDRIAVMATPMT 122
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L++ +L+H+Y + I+ V L VE + ++ ++ K
Sbjct: 123 LKQDKFLSLMHTYEDRSVIYRVPCPKLVGFVE----NGDLDSPKLHDYLQEVLSPYLEKG 178
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHAL 250
D IVL CTHYP + + R + + S A R L +
Sbjct: 179 IDAIVLGCTHYPFVEKMIRTVVGPDIKIFVGSHGTAVELRRRLIAAGLKSDSTGDGTVEI 238
Query: 251 FLS 253
+ S
Sbjct: 239 YNS 241
>gi|317474408|ref|ZP_07933682.1| Asp/Glu/Hydantoin racemase [Bacteroides eggerthii 1_2_48FAA]
gi|316909089|gb|EFV30769.1| Asp/Glu/Hydantoin racemase [Bacteroides eggerthii 1_2_48FAA]
Length = 279
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 53/261 (20%), Positives = 100/261 (38%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + L +
Sbjct: 11 PIGVFDSGYGGLTILSKIREILPEYDYIYLGDNARAPYGTRSFEVVYAFTLQAVTR-LFE 69
Query: 75 YQPVLSVIACNTAFTLIKDELR-STFPSMAFLG-----AVPAIKQAAAYTQSGLISILST 128
L ++ACNTA ++ + P + P ++ T+S + +L+T
Sbjct: 70 MGCHLVILACNTASAKALRSIQINDLPHLDSARRVLGVIRPTVECIGNITRSRHVGVLAT 129
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ I + + + S VE + I+K I +
Sbjct: 130 SGTIKSESYPLEIRKLFPDIKVSGEACPLWVSLVENNEAQGDGTDYFIRKYINELLA--K 187
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT--HQTRVFD 246
+ D +L CTHYP+++ +Q P + + +A + L R +
Sbjct: 188 DREIDTAILGCTHYPILLPKIQQYMPAGITIVSQGQLVADSLKDYLHRHPEIDIKCTRGG 247
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ + + +
Sbjct: 248 KCTYYTTEAEEKFIESASIFL 268
>gi|300814837|ref|ZP_07095071.1| glutamate racemase [Peptoniphilus sp. oral taxon 836 str. F0141]
gi|300511033|gb|EFK38299.1| glutamate racemase [Peptoniphilus sp. oral taxon 836 str. F0141]
Length = 270
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 57/261 (21%), Positives = 106/261 (40%), Gaps = 8/261 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
SI FDSG+GGL VL+ +P +IY D + PYG +++
Sbjct: 3 NRSIGFFDSGVGGLSVLKVSLGEIPRESYIYYGDTLRMPYGVRSKEDIERYTCQAMEFFR 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K ++VIACNTA + R F F PA+K++ ++S +++L+T T+
Sbjct: 63 SK-NVKMAVIACNTATCYGIKKARELFDFPIFGVVEPAVKESLHKSKSKKVALLATEGTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
SY S +I + L +E ++++ I I + E
Sbjct: 122 NSGVYDKFFESYSSNIYIKEIGCPDLVLAIE----NGDLRDEVIVPVINKYLDKFEDFEY 177
Query: 193 DVIVLACTHYPLIVHVFRQLS---PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D ++L CTH+P++ + F+++ V +D ++ + L + +
Sbjct: 178 DTLILGCTHFPIVENTFKRILAKFDRKVQLVDPAEITINELKEYLENHDMLGDHDEESID 237
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
++S + L + +
Sbjct: 238 FYVSSHKEKFKSTLEKLISVN 258
>gi|261210140|ref|ZP_05924437.1| glutamate racemase [Vibrio sp. RC341]
gi|260840680|gb|EEX67229.1| glutamate racemase [Vibrio sp. RC341]
Length = 265
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 82/259 (31%), Positives = 137/259 (52%), Gaps = 11/259 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + +++
Sbjct: 7 PRVLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELAQETLIARVDALVTRMVE 66
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ Q L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++
Sbjct: 67 EEQIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLIATPATVK 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT LI ++ + ++ L+ S L + EE G + DE++ + D
Sbjct: 125 RQYTQELIRNFSANKNVELLGSTRLVNMAEEKLRGKPLDLDELESILHP-----LKHTID 179
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
V VL CTH+PLI +Q+ V +D+ +IARR + LL + H ++ S
Sbjct: 180 VAVLGCTHFPLIKEEIQQVLGEQVQLIDSGVAIARRVQELLGIDKGKSSNR--KHQIYAS 237
Query: 254 GKP--DIAMRRLMQGFGLK 270
P + A+ ++ G
Sbjct: 238 APPWEESALNIKLEQLGFN 256
>gi|86750804|ref|YP_487300.1| glutamate racemase [Rhodopseudomonas palustris HaA2]
gi|86573832|gb|ABD08389.1| glutamate racemase [Rhodopseudomonas palustris HaA2]
Length = 264
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 99/255 (38%), Positives = 150/255 (58%), Gaps = 4/255 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL+FDSG+GGL VL+++ L P+ ++YV DD FPYG + A+ R++ L +++ ++
Sbjct: 7 ILVFDSGLGGLTVLREVVKLRPDARYVYVGDDAFFPYGQKSEEAVIGRVVPLIGELIAEH 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
P L VIACNTA T+ LR+ + ++ F+G VPAIK A A +++ +S+L T T+R
Sbjct: 67 APDLVVIACNTASTMTLAPLRARY-AVPFVGTVPAIKPACAASRTKRVSVLGTSGTVRLE 125
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK--RTD 193
YT LI + C ++LV S+ LA+ E G + ++ I+ EI CF+ +G RTD
Sbjct: 126 YTRALIRDFAGGCDVNLVGSVHLAALAEAALGGADVPDEAIRAEIAPCFVAGDGADDRTD 185
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
IVLACTHYPL++ +L+PWPVDW+D + +IARR LL + +F S
Sbjct: 186 SIVLACTHYPLLLDRLVRLAPWPVDWIDPAPAIARRVATLLGA-GSGHGDAPGVRMVFTS 244
Query: 254 GKPDIAMRRLMQGFG 268
G+ + G
Sbjct: 245 GRLHRLTTTISPYLG 259
>gi|150389186|ref|YP_001319235.1| glutamate racemase [Alkaliphilus metalliredigens QYMF]
gi|149949048|gb|ABR47576.1| glutamate racemase [Alkaliphilus metalliredigens QYMF]
Length = 279
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 64/252 (25%), Positives = 105/252 (41%), Gaps = 12/252 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GG+ VL + +PE ++Y D PYG +KK F + L
Sbjct: 7 KLPIGVFDSGVGGISVLADLISQLPEESYVYYGDSGNAPYGIKSKDEVKKLS-FDVVEFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
V+ACNTA + DELR++ + +G PA+K A SG + +++TP TL
Sbjct: 66 LAQGIKALVVACNTATSAAIDELRASL-DIPVIGMEPALKPALELHPSGRVIVMATPVTL 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R + LI + + + L +E + ++ +E F +
Sbjct: 125 REKKFNTLIDRFNDCGEVIKLPCPGLVEIIER----EGARGPALETYLEKLFSPFNMEEI 180
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ------TRVFD 246
D IVL CTHY + ++ +D + A+ R LL N +
Sbjct: 181 DAIVLGCTHYVFVRESIAEMIGNHAALIDGNGGTAKHVRRLLQEENLLVSQFKDLSSKET 240
Query: 247 DHALFLSGKPDI 258
L+ S + +
Sbjct: 241 SVTLYNSSQDEQ 252
>gi|189464295|ref|ZP_03013080.1| hypothetical protein BACINT_00636 [Bacteroides intestinalis DSM
17393]
gi|189438085|gb|EDV07070.1| hypothetical protein BACINT_00636 [Bacteroides intestinalis DSM
17393]
Length = 279
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 55/261 (21%), Positives = 108/261 (41%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L K+R +P+Y +IY+ D+ PYG + + + + L +
Sbjct: 11 PIGVFDSGYGGLTILSKIREALPQYDYIYLGDNARTPYGTRSFEIVYEFTLQAVTK-LFE 69
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ACNTA + ++L P+ LG + P ++ + TQS + +L+T
Sbjct: 70 MGCHLVILACNTASAKALRSIQINDLPGMDPARRVLGVIRPTVECIGSITQSRHVGVLAT 129
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ IH + + + S VE + ++K I +
Sbjct: 130 AGTIKSESYPLEIHKLFPDIQVAGEACPLWVSLVENNEAEGDGTDYFVRKYINELLA--K 187
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFD 246
+ D ++L CTHYPL++ ++ P + + + +A + R +
Sbjct: 188 DAQIDTVILGCTHYPLLLPKIKKHMPDGITTVAQGELVADSLKDYFHRHPEMDAKCTKGG 247
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ + + + +
Sbjct: 248 NCTYYTTEAEEKFIESASTFL 268
>gi|262404892|ref|ZP_06081446.1| glutamate racemase [Vibrio sp. RC586]
gi|262348976|gb|EEY98115.1| glutamate racemase [Vibrio sp. RC586]
Length = 265
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 82/259 (31%), Positives = 137/259 (52%), Gaps = 11/259 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + +++
Sbjct: 7 PRVLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELAQETLIARVDALVTRMVE 66
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ Q L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++
Sbjct: 67 EEQIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLIATPATVK 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT LI ++ + ++ L+ S L + EE G + DE++ + D
Sbjct: 125 RQYTQELIRNFSANKNVELLGSTRLVNMAEEKLRGKPLDLDELESILHP-----LKHTID 179
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
V VL CTH+PLI +Q+ V +D+ +IARR + LL + H ++ S
Sbjct: 180 VAVLGCTHFPLIKEEIQQVLGEQVQLIDSGVAIARRVQELLGIDKGESSNR--KHQIYAS 237
Query: 254 GKP--DIAMRRLMQGFGLK 270
P + A+ ++ G
Sbjct: 238 APPWEESALNIKLEQLGFN 256
>gi|78066994|ref|YP_369763.1| glutamate racemase [Burkholderia sp. 383]
gi|77967739|gb|ABB09119.1| glutamate racemase [Burkholderia sp. 383]
Length = 286
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 70/259 (27%), Positives = 105/259 (40%), Gaps = 8/259 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL VL+ +R +P+ FIYVAD PYG ++ + +R + + + L +
Sbjct: 16 PIGIFDSGLGGLSVLRAVRAQLPDESFIYVADSHHAPYGPRDEAFITERTLAI-GEWLAR 74
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
VIACNTA R SM +G P IK AAA + SG+ +L+T +TL
Sbjct: 75 EGAKALVIACNTATARAIAATREHL-SMPLVGVEPGIKPAAAVSASGVAGVLATQSTLNS 133
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
L+ Y + L +E ++ ++ D
Sbjct: 134 PRFQALLDRYGAGRRFICQPGHGLVEAIERGDTN----SPALRALLDSYLQPMLDDGADT 189
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV--FDDHALFL 252
+VL CTHYP R L + +D SD+IAR+ +L +
Sbjct: 190 LVLGCTHYPFFTETIRDLVGDRLTLVDTSDAIARQLVRVLDERHLRAPAGTRAAPPRFCS 249
Query: 253 SGKPDIAMRRLMQGFGLKS 271
+ GL +
Sbjct: 250 TSDGRQLQALASTLLGLAA 268
>gi|229520053|ref|ZP_04409481.1| glutamate racemase [Vibrio cholerae TM 11079-80]
gi|229342841|gb|EEO07831.1| glutamate racemase [Vibrio cholerae TM 11079-80]
Length = 265
Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats.
Identities = 80/259 (30%), Positives = 135/259 (52%), Gaps = 11/259 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L + +++
Sbjct: 7 PRVLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELTQETLIARVGTLVTRMVE 66
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ + L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++TPAT++
Sbjct: 67 QERIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLIATPATVK 124
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT LI + + ++ L+ S L + EE G + +E+ ++ D
Sbjct: 125 RQYTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELASILQP-----LKNTID 179
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
V VL CTH+PLI +Q+ V +D+ +IARR + LL H ++ S
Sbjct: 180 VAVLGCTHFPLIKEEIQQVLGDQVQLIDSGLAIARRVQELLGVEKGV--GTNQKHQIYAS 237
Query: 254 GKP--DIAMRRLMQGFGLK 270
P + A+ ++ G
Sbjct: 238 APPWEESALNINLEQLGFN 256
>gi|148543776|ref|YP_001271146.1| glutamate racemase [Lactobacillus reuteri DSM 20016]
gi|184153182|ref|YP_001841523.1| glutamate racemase [Lactobacillus reuteri JCM 1112]
gi|227363244|ref|ZP_03847376.1| glutamate racemase [Lactobacillus reuteri MM2-3]
gi|325682148|ref|ZP_08161666.1| glutamate racemase [Lactobacillus reuteri MM4-1A]
gi|167017317|sp|A5VIY5|MURI_LACRD RecName: Full=Glutamate racemase
gi|229486242|sp|B2G6G1|MURI_LACRJ RecName: Full=Glutamate racemase
gi|148530810|gb|ABQ82809.1| glutamate racemase [Lactobacillus reuteri DSM 20016]
gi|183224526|dbj|BAG25043.1| glutamate racemase [Lactobacillus reuteri JCM 1112]
gi|227071700|gb|EEI09991.1| glutamate racemase [Lactobacillus reuteri MM2-3]
gi|324978792|gb|EGC15741.1| glutamate racemase [Lactobacillus reuteri MM4-1A]
Length = 267
Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats.
Identities = 54/255 (21%), Positives = 100/255 (39%), Gaps = 6/255 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL V++ +R +P+ I+V D FPYG +++ + + L
Sbjct: 3 KRPIGVMDSGLGGLSVIRVLREQLPQESVIFVGDQGHFPYGTKTKEQIQQLALRI-GKFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + +IACNTA L++ P P AA I ++ T +T+
Sbjct: 62 LEQDVKMMIIACNTATAAALRLLQNELPIPVIGVIKPGA-MAATQHHYKKIGVIGTESTI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + + + L S VE G E +K ++ + +
Sbjct: 121 KNGAYAKTLAKLNPDLSVISSPAQPLVSIVEHGQTG----TSEAQKAVDTELEVFDNQSI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
+ ++L CTH+P + V +D + R+A+ LL N + L+
Sbjct: 177 EALILGCTHFPFLQKEIHNKLGSNVQLIDPAFETIRQAKELLTGKNQLSDNLASSINLYS 236
Query: 253 SGKPDIAMRRLMQGF 267
+G + Q
Sbjct: 237 TGDAKDLVAGAQQWL 251
>gi|307564832|ref|ZP_07627360.1| glutamate racemase [Prevotella amnii CRIS 21A-A]
gi|307346554|gb|EFN91863.1| glutamate racemase [Prevotella amnii CRIS 21A-A]
Length = 278
Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats.
Identities = 53/261 (20%), Positives = 96/261 (36%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L ++ L+PEY +IY+ D+ PYG+ + + L
Sbjct: 9 PIGVFDSGYGGLTILHAIQKLLPEYDYIYLGDNARAPYGSRSFDVVYEFTRQAVLK-LFD 67
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLG------AVPAIKQAAAYTQSGLISILST 128
L ++ CNTA ++ + P + T S I IL+T
Sbjct: 68 MGCSLVILGCNTASAKALRTIQRNDLPVIAPDNRVLGVIRPTAEVVGLLTHSNHIGILAT 127
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+R + I + + ++ + +E + +KK IE I +
Sbjct: 128 EGTVRSKSYNIEIQKLWPKISVTGIACPLWVPIIENNEADSPGADYFVKKRIEH--IMRL 185
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFD 246
+ D I+L CTHYP+++ + + + +A+ + L R +
Sbjct: 186 DPQIDTIILGCTHYPILMPKILKHINKGIKIVAQGKYVAQSLKDYLYRHPEMDKKCTKQG 245
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ + P
Sbjct: 246 TTKYYTTENPSKFTENARIFL 266
>gi|288800322|ref|ZP_06405780.1| glutamate racemase [Prevotella sp. oral taxon 299 str. F0039]
gi|288332535|gb|EFC71015.1| glutamate racemase [Prevotella sp. oral taxon 299 str. F0039]
Length = 281
Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats.
Identities = 52/262 (19%), Positives = 104/262 (39%), Gaps = 12/262 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L+ R +P+Y++IY+ D+ PYG+ + + L +
Sbjct: 11 PIGVFDSGYGGLTILEAFRKELPQYNYIYLGDNARAPYGSRSFDVVYEFTRQAVMK-LFE 69
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFL--GAVPAIKQAAAYTQSGLISILS 127
L ++ CNTA + + +L S+ + P ++ T + + IL+
Sbjct: 70 LGCRLIILGCNTASAKALRTIQRHDLPQMDNSLRRVLGIIHPTVEVIGDLTHTNHVGILA 129
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ + I+ + VS + +E + + +KK I+
Sbjct: 130 TEGTIKSNSYALEINKLHPDITVTGVSCPLWVPIIENNEADGEGADYFVKKRIDTIMS-- 187
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVF 245
+ D ++L CTHYPL++ ++ +P V + +A+ L R + +
Sbjct: 188 LDSQIDTLILGCTHYPLLLPKIKKYTPKGVQVVAQGQYVAKSLANYLQRHSDIEQLCIKQ 247
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
+ + +
Sbjct: 248 GVTQYYTTENAERFKESAKIFL 269
>gi|120610174|ref|YP_969852.1| glutamate racemase [Acidovorax citrulli AAC00-1]
gi|120588638|gb|ABM32078.1| glutamate racemase [Acidovorax citrulli AAC00-1]
Length = 296
Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 104/270 (38%), Gaps = 11/270 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL VL+ +R +P F+Y+AD PYG D + R + +
Sbjct: 6 QRPIGVFDSGVGGLSVLRALRAELPHERFVYLADSGNAPYGERGDAYVAARTHAIAGYLQ 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA E+R+ + +G PA+K A + T++G + ++ T TL
Sbjct: 66 RTHGIKALVVACNTATAAAIHEVRARHADLPLVGVEPALKPALSLTRTGRVGVIGTRGTL 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED---EIKKEIEGCFIEKEG 189
L S + LA +E + EI+
Sbjct: 126 SSAKFQRLRASLQGPVEFVVQPCDGLAHAIERSTADTLPDDPATAEIRALCARYMAALGP 185
Query: 190 KR-----TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
D +VL CTHY R + V ++ + +AR+ R LL
Sbjct: 186 FGAAPGEIDTLVLGCTHYLFAEDALRAHTGPQVRLVETGEPVARQTRRLLEAAGALAAAT 245
Query: 245 ---FDDHALFLSGKPDIAMRRLMQGFGLKS 271
+LF +G + + L +
Sbjct: 246 VPATGTTSLFTTGALPLLQAAAHRWLQLPA 275
>gi|255530901|ref|YP_003091273.1| glutamate racemase [Pedobacter heparinus DSM 2366]
gi|255343885|gb|ACU03211.1| glutamate racemase [Pedobacter heparinus DSM 2366]
Length = 279
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 59/267 (22%), Positives = 103/267 (38%), Gaps = 11/267 (4%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
SI +FDSG GGL V + + +P+Y++IY D+ PYG+ + + +
Sbjct: 1 MNDNQSIGVFDSGYGGLTVFKSIASKLPQYNYIYFGDNARTPYGDHSFETIYQYTLECVE 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLG------AVPAIKQAAAYTQSGLI 123
L L ++ACNTA ++ + P + +T S +
Sbjct: 61 -WLFAQGCPLVILACNTASAKALRNIQQNVLPFKYPDRRVLGVIRPTAEIVGDFTLSKHV 119
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
++ T T+ I+ + + + S + +E + +KK I+
Sbjct: 120 GVMGTRGTVNSESYLMEINKFFPEISVSQQSCPMWVPLIENNEHIAAGADYFVKKYIDEL 179
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
+ + D IVLACTHYPL+V + + P ++ L D +A L R
Sbjct: 180 LA--KDNQIDCIVLACTHYPLLVPKIKTILPDHINLLGQDDIVADSLALYLENHPEMTDR 237
Query: 244 V--FDDHALFLSGKPDIAMRRLMQGFG 268
+ + F SG + + FG
Sbjct: 238 IARENKTIFFTSGDAQVFDTQASVFFG 264
>gi|293607195|ref|ZP_06689536.1| glutamate racemase [Achromobacter piechaudii ATCC 43553]
gi|292814287|gb|EFF73427.1| glutamate racemase [Achromobacter piechaudii ATCC 43553]
Length = 279
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 63/250 (25%), Positives = 104/250 (41%), Gaps = 14/250 (5%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I ++DSG+GGL VL+ +R + + +YVAD PYG +++R + + +
Sbjct: 8 SPIGVYDSGVGGLSVLRAIRDALSDESLLYVADSAHVPYGEKSQDFVEQRALTVADYFVS 67
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++ + V ACNTA ++R P + +G PAIK AA T SG++ + +T TL
Sbjct: 68 RHAKAMVV-ACNTATAAAIAQVRRRHPGLIVIGVEPAIKPAAHLTHSGVVGVFATTGTLA 126
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ L+ + I L VE+ + + G + D
Sbjct: 127 SPKFAALVQREAPEVRILLHPCPQWVRLVEQGELSG----PAVDAAVAGPVAQLRAAGAD 182
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-------- 245
V+VL CTH+P + + + V L+ +AR R L T
Sbjct: 183 VLVLGCTHFPFLRDAIQAAAGPGVPLLETGAPVARWLRHQLQERALLCTDSARTADTHAR 242
Query: 246 -DDHALFLSG 254
D L +G
Sbjct: 243 LGDLRLETTG 252
>gi|81428019|ref|YP_395018.1| glutamate racemase [Lactobacillus sakei subsp. sakei 23K]
gi|123564670|sp|Q38YM1|MURI_LACSS RecName: Full=Glutamate racemase
gi|78609660|emb|CAI54706.1| Glutamate racemase [Lactobacillus sakei subsp. sakei 23K]
Length = 274
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 42/255 (16%), Positives = 92/255 (36%), Gaps = 5/255 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I DSG+GGL ++++ R +P +++ D PYG +++ ++ L
Sbjct: 3 KQPIGFMDSGVGGLTLVKEARKRLPNEDMVFIGDQARLPYGEKPAATVREFAWQ-MANFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA +L++ P A T + + +++T T+
Sbjct: 62 RHQEIKALVIACNTATAAALPDLQAQLAIPVIGVIKPGSIAALQTTHNRRVGVIATTGTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ S + + + +++ + +E ++ + +
Sbjct: 122 QSAAYSQQMAALNPDVQVTGLAAPQFVTMIEANQRHG----QAVQTIVNQILQPLQKSEI 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTH+PL+ + V ++ + +L + T ++
Sbjct: 178 DTLVLGCTHFPLLTTAIQTAVGPDVTLVNPAVQAITMLEEVLTQQQQLATTTPGTLRMYT 237
Query: 253 SGKPDIAMRRLMQGF 267
+G Q
Sbjct: 238 TGSVAAFEEIAQQWL 252
>gi|241763139|ref|ZP_04761199.1| glutamate racemase [Acidovorax delafieldii 2AN]
gi|241367764|gb|EER62018.1| glutamate racemase [Acidovorax delafieldii 2AN]
Length = 284
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 68/244 (27%), Positives = 104/244 (42%), Gaps = 8/244 (3%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ +SI +FDSG+GGL VL+ + +P F+Y+AD PYG D + +R +
Sbjct: 3 QASSSIGVFDSGVGGLSVLRALIAALPHERFVYLADSGNAPYGERGDAFVARRTHAITDY 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+ +Y V+ACNTA E+RS P + +G PA+K A T +G I +L T
Sbjct: 63 LQSQYDIKALVVACNTATAAAIHEVRSAHPELPLVGVEPALKPAVGLTHTGRIGVLGTRG 122
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE---YACGIKIKEDEIKKEIEGCFIEK 187
TL L S Q + LA +E + G E E
Sbjct: 123 TLTSAKFGRLQASLAGQAEFVVQPCDGLAHAIERSVGWPSGPNAPGTETFALCEKYLASM 182
Query: 188 EGKR-----TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ D +VL CTHY + R L V ++ + +AR+ R LL + + +
Sbjct: 183 KPFGSAPGSIDTLVLGCTHYVFVEEALRSLVGPQVQMIETGEPVARQTRRLLEQESLLAS 242
Query: 243 RVFD 246
+
Sbjct: 243 DDPN 246
>gi|282882426|ref|ZP_06291053.1| glutamate racemase [Peptoniphilus lacrimalis 315-B]
gi|281297746|gb|EFA90215.1| glutamate racemase [Peptoniphilus lacrimalis 315-B]
Length = 270
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 57/261 (21%), Positives = 106/261 (40%), Gaps = 8/261 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
SI FDSG+GGL VL+ +P +IY D + PYG +++
Sbjct: 3 NRSIGFFDSGVGGLSVLKVSLGEIPRESYIYYGDTLRMPYGVKSKEDIERYTCQAMEFFR 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K ++VIACNTA + R F F PA+K++ ++S +++L+T T+
Sbjct: 63 SK-NVKMAVIACNTATCYGIKKARELFDFPIFGVVEPAVKESLHKSKSKKVALLATEGTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
SY S +I + L +E ++++ I I + E
Sbjct: 122 NSGVYDKFFESYSSNIYIKEIGCPDLVLAIE----NGDLRDEVIVPVINKYLDKFEDFEY 177
Query: 193 DVIVLACTHYPLIVHVFRQLS---PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D ++L CTH+P++ + F+++ V +D ++ + L + +
Sbjct: 178 DALILGCTHFPIVENTFKRILAKFDRKVQLVDPAEITINELKEYLENHDMLGDHDEESID 237
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
++S + L + +
Sbjct: 238 FYVSSHKEKFKSTLEKLISVN 258
>gi|218264477|ref|ZP_03478310.1| hypothetical protein PRABACTJOHN_04010 [Parabacteroides johnsonii
DSM 18315]
gi|218221970|gb|EEC94620.1| hypothetical protein PRABACTJOHN_04010 [Parabacteroides johnsonii
DSM 18315]
Length = 278
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 57/261 (21%), Positives = 95/261 (36%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG GGL + K+R MP Y +IY+ D+ PYG + + L
Sbjct: 8 PIGIFDSGYGGLTIFDKIREAMPGYDYIYLGDNARSPYGTRSFEVVYRFTRQAVE-TLFN 66
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ACNTA + + +L P+ LG + P ++ ++S + IL T
Sbjct: 67 EGCQLVILACNTASAKALRTIQQRDLPQWDPARRVLGVIRPTVELMDKISKSKHVGILGT 126
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+ S I + + + VE G + ++K +E
Sbjct: 127 TGTITSGSYSLEIKKMFPHMTVTGEACPMWVPLVENNEFGSPGADYFVRKHLEHILA--T 184
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFD 246
+ D +VL CTHYPL++ + P + + +A L R +
Sbjct: 185 DPKIDTLVLGCTHYPLLIEKIKAFLPAGITLFSQGEYVAASLTDYLHRHPEMDIRLTKQG 244
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ +
Sbjct: 245 NCRFLTTESATKFSDAASVFL 265
>gi|239905425|ref|YP_002952164.1| glutamate racemase [Desulfovibrio magneticus RS-1]
gi|239795289|dbj|BAH74278.1| glutamate racemase [Desulfovibrio magneticus RS-1]
Length = 270
Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats.
Identities = 53/258 (20%), Positives = 94/258 (36%), Gaps = 6/258 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I IFDSG+GGL V + + L+P +Y D PYG + + + +
Sbjct: 4 NNSPIGIFDSGVGGLTVARAVMELLPNEPVVYFGDTARVPYGVKSPDTVARYAAQI-TRF 62
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + L ++ACNT + + + P A A T++ I I++TP+T
Sbjct: 63 LLEKNVKLLIVACNTMAAVALPAITNIAPVPVLEVIDAGAASALAATRTRRIGIIATPST 122
Query: 132 LRRTYTSNLIHS-YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ + H + + EE + +
Sbjct: 123 VASQAYEQALARLGGPDVHTVAKACPLFVPLAEEGLT----DHPATRLIAAEYLTPLAAE 178
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D ++L CTHYPL+ + + V D++ ++ARRA +L H+
Sbjct: 179 NLDTLILGCTHYPLLAPLLADVVGPSVRLQDSATAVARRAAAILDEKGLRHAGPSPRHSF 238
Query: 251 FLSGKPDIAMRRLMQGFG 268
++ P + G
Sbjct: 239 HVTDMPHRFQAIGQRFLG 256
>gi|251794653|ref|YP_003009384.1| glutamate racemase [Paenibacillus sp. JDR-2]
gi|247542279|gb|ACS99297.1| glutamate racemase [Paenibacillus sp. JDR-2]
Length = 258
Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats.
Identities = 59/255 (23%), Positives = 108/255 (42%), Gaps = 8/255 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I IFDSG+GGL VL + +P ++IY+AD PYG + ++ ++ ++ +
Sbjct: 2 TIGIFDSGLGGLTVLAEALKRLPAENYIYMADTKHVPYGTKSEEEVRDFVLQTVEQMVAE 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--STPATL 132
V+ACNTA ++ +ELR + S +G PA+K A ++ +L +TP TL
Sbjct: 62 -GIDALVVACNTATSIAINELRERY-SFPIIGMEPAVKPAVEMNRATGKKVLVWATPLTL 119
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R L+ + + + L E ++ +D +K +
Sbjct: 120 RMPKYYALVSRVDEEGIVDSLPMPELVQYCE----ALQFDKDVLKDYFLAKLAPYDLNEY 175
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
++VL CTH+P + R + P + ++ + RR +L R R
Sbjct: 176 GILVLGCTHFPFYTSILRNVLPPHIQIVNGNLGTIRRLTAMLSRYGIGTGRGSGQVRFMC 235
Query: 253 SGKPDIAMRRLMQGF 267
+G + ++
Sbjct: 236 TGGEAAYIEKMRSAL 250
>gi|258626053|ref|ZP_05720908.1| glutamate racemase [Vibrio mimicus VM603]
gi|258581673|gb|EEW06567.1| glutamate racemase [Vibrio mimicus VM603]
Length = 265
Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats.
Identities = 81/265 (30%), Positives = 136/265 (51%), Gaps = 15/265 (5%)
Query: 12 LQNS----ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ + +LIFDSG+GGL V +++ +P+ +IY+ D+ +PYG L R+ L
Sbjct: 1 MSSPSFPRVLIFDSGVGGLSVYREIEARLPQLSYIYLFDNAAYPYGELAQETLIARVDAL 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ ++++ Q L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++
Sbjct: 61 VTRMVEQEQIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLIA 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TPAT++R YT LI + + ++ L+ S L + EE G + +E++ +
Sbjct: 119 TPATVKRQYTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELENILHP----- 173
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
DV VL CTH+PLI +Q+ V +D+ +IARR + LL
Sbjct: 174 LKHTIDVAVLGCTHFPLIKEEIQQVLGEQVQLIDSGLAIARRVQELLGIDKG--EGENQK 231
Query: 248 HALFLSGKP--DIAMRRLMQGFGLK 270
H ++ S P + A+ ++ G
Sbjct: 232 HHIYASAPPWEESALNIKLKELGFN 256
>gi|149374689|ref|ZP_01892463.1| glutamate racemase [Marinobacter algicola DG893]
gi|149361392|gb|EDM49842.1| glutamate racemase [Marinobacter algicola DG893]
Length = 283
Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats.
Identities = 75/226 (33%), Positives = 119/226 (52%), Gaps = 5/226 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+L+FDSG+GGL V + +P +Y+AD+ GFPYG + + +R L L
Sbjct: 4 PRVLVFDSGVGGLSVADCIHRQLPGVKLVYLADNAGFPYGAQPESVVIERSQALIRLALS 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++ + V+ACNTA T++ LR+ S+ +G VPA+K AAA +++ I +L+TPAT+R
Sbjct: 64 EFPCDVIVVACNTASTVVLPYLRA-MTSIPVVGVVPAVKPAAAVSENRRIGLLATPATVR 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R Y ++LI + S C + + L +E G + E + D
Sbjct: 123 RPYLADLIDEFASDCTVERLGHPDLVQWIENLVSGSPVPEQA----LSVALQPFRDVGVD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
+VL CTHYPLI + ++ P W+D+ ++IARRA L +
Sbjct: 179 TVVLGCTHYPLIKDLLQRQLPAVKHWVDSGEAIARRAIWLFEQQGL 224
>gi|218131992|ref|ZP_03460796.1| hypothetical protein BACEGG_03615 [Bacteroides eggerthii DSM 20697]
gi|217985868|gb|EEC52208.1| hypothetical protein BACEGG_03615 [Bacteroides eggerthii DSM 20697]
Length = 279
Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats.
Identities = 53/261 (20%), Positives = 100/261 (38%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L K+R ++PEY +IY+ D+ PYG + + + L +
Sbjct: 11 PIGVFDSGYGGLTILSKIREILPEYDYIYLGDNARAPYGTRSFEVVYAFTLQAVTR-LFE 69
Query: 75 YQPVLSVIACNTAFTLIKDELR-STFPSMAFLG-----AVPAIKQAAAYTQSGLISILST 128
L ++ACNTA ++ + P + P ++ T+S + +L+T
Sbjct: 70 MGCHLVILACNTASAKALRSIQINDLPHLDSARRVLGVIRPTVECIGNITRSRHVGVLAT 129
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ I + + + S VE + I+K I +
Sbjct: 130 SGTIKSESYPLEIRKLFPDIKVSGEACPLWVSLVENNEALGDGTDYFIRKYINELLA--K 187
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT--HQTRVFD 246
+ D +L CTHYP+++ +Q P + + +A + L R +
Sbjct: 188 DREIDTAILGCTHYPILLPKIQQYMPAGITIVSQGQLVADSLKDYLHRHPEIDIKCTRGG 247
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ + + +
Sbjct: 248 KCTYYTTEAEEKFIESASIFL 268
>gi|239944153|ref|ZP_04696090.1| glutamate racemase [Streptomyces roseosporus NRRL 15998]
gi|239990608|ref|ZP_04711272.1| glutamate racemase [Streptomyces roseosporus NRRL 11379]
gi|291447623|ref|ZP_06587013.1| glutamate racemase [Streptomyces roseosporus NRRL 15998]
gi|291350570|gb|EFE77474.1| glutamate racemase [Streptomyces roseosporus NRRL 15998]
Length = 277
Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats.
Identities = 58/257 (22%), Positives = 95/257 (36%), Gaps = 8/257 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL V+ ++ L+P H IY+ D PYG ++K + L
Sbjct: 7 PIGVFDSGFGGLTVVSALQRLLPSEHIIYLGDSARQPYGARRLAEVRKMSLECLDQ-LVG 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
VIACNTA + + R + PA + AA+ T++ + ++ T AT
Sbjct: 66 LGVKAIVIACNTASAAVLRDARERYQVPVIEVVGPASRMAASATKNHSVGVVCTEATRVA 125
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + + + VE E+ E D
Sbjct: 126 KAYEDAFAA-APHIDLVTKACPAFVGFVEAGVT----TGPELVSVAEQYLTPLVEADIDT 180
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT--HQTRVFDDHALFL 252
++L CTHYPLI + V + ++++ A+ L R N +
Sbjct: 181 LILGCTHYPLISDAISGVMGERVALISSAEAAAQELAECLLRWNLCRPASGGRPSRLFLT 240
Query: 253 SGKPDIAMRRLMQGFGL 269
+G + R + GL
Sbjct: 241 TGDIEHFERIGSRFLGL 257
>gi|94265271|ref|ZP_01289030.1| Glutamate racemase [delta proteobacterium MLMS-1]
gi|93454252|gb|EAT04568.1| Glutamate racemase [delta proteobacterium MLMS-1]
Length = 264
Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats.
Identities = 61/257 (23%), Positives = 111/257 (43%), Gaps = 9/257 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GG+ V + + +P++ IY D PYG+ + L +
Sbjct: 2 IGIFDSGVGGMTVARAIEQALPDHRLIYFGDLARTPYGSKSAETITAYSRQNVD-FLLQQ 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACN+A ++ LR+++ F PA+++A + G + ++ T AT+R
Sbjct: 61 GAKLLVVACNSAASVATAALRASYELPLFEVISPAVREAVHCSSGGRVGVIGTRATIRSG 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L+ C + + +L VE + + E K + + + D +
Sbjct: 121 VYEELLQRQRPACRVFAAACPLLVPLVE----EGWLDKRETKMILRRYLAPLKRHQVDTL 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT----HQTRVFDDHALF 251
VL CTHYPL+ + ++ V +D+S ++A + L Q R ++ +
Sbjct: 177 VLGCTHYPLLKEMIQRRIGRRVRVIDSSAALAGELQRFLAAHPEIEQSLQRRREGENLYY 236
Query: 252 LSGKPDIAMRRLMQGFG 268
+S + A + FG
Sbjct: 237 VSDVTEAATATAHRIFG 253
>gi|46447487|ref|YP_008852.1| glutamate racemase [Candidatus Protochlamydia amoebophila UWE25]
gi|46401128|emb|CAF24577.1| probable glutamate racemase [Candidatus Protochlamydia amoebophila
UWE25]
Length = 249
Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats.
Identities = 59/239 (24%), Positives = 104/239 (43%), Gaps = 5/239 (2%)
Query: 29 LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAF 88
+++M L+P+ + +Y+ D PYGN + + + +L+K Q + V+ACNTA
Sbjct: 1 MREMIRLLPQENLLYLGDTARVPYGNKSAATIIRYSIENAIFLLEK-QIKVLVVACNTAS 59
Query: 89 TLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQC 148
L +L+ F P K AAA T++ I++L T T+ + IH +
Sbjct: 60 ALALPKLKQLFHLPIIGVIEPGAKLAAATTRNKRIAVLGTKGTIESGAYQSAIHQLIPDA 119
Query: 149 HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV 208
I ++ +L S VE + K I+ E D I+L CTHYPL+ +
Sbjct: 120 IIFPIACPLLVSLVE----EGFLYHSASKLIIQEYLKNLEKADVDTILLGCTHYPLLKPL 175
Query: 209 FRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
++ V +D++ + A+ + LL + H F++ P+ + F
Sbjct: 176 IEEIMGSSVTIIDSALTCAQTVKKLLESHQLVNSNQHAIHQYFVTDDPEKFRQLGEYLF 234
>gi|296125119|ref|YP_003632371.1| glutamate racemase [Brachyspira murdochii DSM 12563]
gi|296016935|gb|ADG70172.1| glutamate racemase [Brachyspira murdochii DSM 12563]
Length = 275
Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats.
Identities = 54/258 (20%), Positives = 110/258 (42%), Gaps = 11/258 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL VL+++ L+P ++IY+ D++ PYG+ + + + L
Sbjct: 11 PIAVFDSGFGGLTVLKQLLQLLPNENYIYLGDNINIPYGDKSEEEIINLTSKMVE-FLIS 69
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ + +IACNT + L+ + + A T++ IS+++T T+
Sbjct: 70 KKCKIIIIACNTISACAYNILKQKYDIPIIEVISNGVADALNKTKNNNISVMATEFTVHS 129
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
N I+ + + I +S L +E + D +K ++ ++D
Sbjct: 130 NVYKNKINKHNKESKITQISCKELCPMIENDWYSYDNRLDVLKNYLKN-----IDDKSDT 184
Query: 195 IVLACTHYPLIVHVFRQLSPWPVD-----WLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
++LACTHYP I+ ++ + V +D + + + L + N T +D
Sbjct: 185 LILACTHYPHIIDDIKKTLEYNVKNSIKNIIDPAYHTSMSVKEYLEKNNLINTDKTNDIT 244
Query: 250 LFLSGKPDIAMRRLMQGF 267
++ + + + +
Sbjct: 245 IYTTASVEKEEKIINIFM 262
>gi|126667191|ref|ZP_01738165.1| glutamate racemase [Marinobacter sp. ELB17]
gi|126628347|gb|EAZ98970.1| glutamate racemase [Marinobacter sp. ELB17]
Length = 280
Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats.
Identities = 81/231 (35%), Positives = 122/231 (52%), Gaps = 5/231 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
S+L+FDSG+GGL V +R P +Y+AD+ GFPYG+ + + +R L + L
Sbjct: 7 PSVLVFDSGVGGLSVAASIRRRCPHLPLVYLADNAGFPYGDKPEEEVTRRTCNLVTSALS 66
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++ + V+ACNTA T+ LR A +G VPAIK AAA + + I IL+TPAT+
Sbjct: 67 QFDCQIVVLACNTASTVALPALRQCVSE-AVVGVVPAIKPAAAISVNRRIGILATPATVA 125
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R+Y LI Y + C + + L E A G + + + + E D
Sbjct: 126 RSYLDQLIADYAADCQVSRIGHPSLVHWAEGLARGEPVP----QSRLAEILVPFELAGVD 181
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
+VL CTHYPL++ +Q +P W+D+ D+IARR LL + + Q +
Sbjct: 182 TVVLGCTHYPLLLPALKQAAPGVRFWVDSGDAIARRVEQLLAFLKSAQPQA 232
>gi|332638684|ref|ZP_08417547.1| glutamate racemase [Weissella cibaria KACC 11862]
Length = 281
Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats.
Identities = 45/259 (17%), Positives = 93/259 (35%), Gaps = 9/259 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+I DSGIGGL V+++ +P+ YV D PYG + + L
Sbjct: 3 NRAIGYIDSGIGGLTVVKQALKQIPDEQVYYVGDTARMPYGPRPQEEVLGFTWQMV-RYL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + V+ACNTA +L++ P + A + G I +++T T+
Sbjct: 62 LKKDIKMLVVACNTATAAALPDLQAKLDIPVVGVIQPGVDAALRKSADGEIGVIATAGTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ E + ++ ++ + +
Sbjct: 122 KSLAYYNGLLQGNRAANVVQLAAPEFVDVAE----NHDYTSEFARQVVKEKLSYFKNHQV 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD----DH 248
D ++L CTH+PL+ + ++ V +++ L + + + D
Sbjct: 178 DTLILGCTHFPLMENFIQEAMGPQVTLVNSGAETISTVVEFLDKFDLRRASANPADHNDD 237
Query: 249 ALFLSGKPDIAMRRLMQGF 267
F +G +
Sbjct: 238 EYFTTGSVKRFATIGGRWL 256
>gi|94268729|ref|ZP_01291267.1| Glutamate racemase [delta proteobacterium MLMS-1]
gi|93451485|gb|EAT02316.1| Glutamate racemase [delta proteobacterium MLMS-1]
Length = 264
Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats.
Identities = 62/257 (24%), Positives = 112/257 (43%), Gaps = 9/257 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GG+ V + + +P++ IY D PYG+ + L +
Sbjct: 2 IGIFDSGVGGMTVARAIEQALPDHRLIYFGDLARTPYGSKSAETITAYSRQNVD-FLRQQ 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACN+A ++ LR+++ F PA+++A Y+ G + ++ T AT+R
Sbjct: 61 GAKLLVVACNSAASVATAALRASYELPLFEVISPAVREAVHYSSGGRVGVIGTRATIRSG 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L+ C + + +L VE + + E K + + + D +
Sbjct: 121 VYEELLQRQRPACRVFAAACPLLVPLVE----EGWLDKRETKMILRRYLAPLKRHQVDTL 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT----HQTRVFDDHALF 251
VL CTHYPL+ + ++ V +D+S ++A + L Q R ++ +
Sbjct: 177 VLGCTHYPLLKEMIQRRIGRRVRVIDSSAALAGELQRFLAAHPEIEQSLQRRREGENLYY 236
Query: 252 LSGKPDIAMRRLMQGFG 268
+S + A + FG
Sbjct: 237 VSDVTEAATATAHRIFG 253
>gi|84394314|ref|ZP_00993037.1| glutamate racemase [Vibrio splendidus 12B01]
gi|84375044|gb|EAP91968.1| glutamate racemase [Vibrio splendidus 12B01]
Length = 276
Score = 209 bits (531), Expect = 5e-52, Method: Composition-based stats.
Identities = 82/263 (31%), Positives = 138/263 (52%), Gaps = 11/263 (4%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
LQ +IL+FDSG+GGL V +++ L+P +++ YV D+ +PYG + L R+ + +
Sbjct: 14 SLQKNILVFDSGVGGLSVYKEISQLLPNHNYTYVFDNEAYPYGELDQQVLIHRVQSIVTS 73
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+ + + VIACNTA T++ LR+ S+ +G VPAIK A+ + + +++TPA
Sbjct: 74 FVASHAIDIVVIACNTASTIVLPTLRANN-SIPIVGVVPAIKPASLL-ANKAVGLIATPA 131
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ R YT LI ++ S + L+ S L E+ G I +E+++ ++
Sbjct: 132 TITREYTHELIKNFSSNKRVELLGSTRLVDMAEDKLRGEAINLEELQQILQPMI-----N 186
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
DV VL CTH+PLI +Q+ V +D+ +IA+R + LL + R +
Sbjct: 187 TIDVAVLGCTHFPLIKSEIQQVLGKSVLLVDSGKAIAKRVQDLLDLESG--NREGGVREV 244
Query: 251 FLSGKP--DIAMRRLMQGFGLKS 271
F S P + A+ ++ G S
Sbjct: 245 FCSALPKKESALNSTLKQLGFSS 267
>gi|110639009|ref|YP_679218.1| glutamate racemase [Cytophaga hutchinsonii ATCC 33406]
gi|110281690|gb|ABG59876.1| glutamate racemase [Cytophaga hutchinsonii ATCC 33406]
Length = 269
Score = 209 bits (531), Expect = 5e-52, Method: Composition-based stats.
Identities = 64/257 (24%), Positives = 103/257 (40%), Gaps = 7/257 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I IFDSGIGGL V + L+P IY D FPYG+ A++ + + +L
Sbjct: 5 QRPIGIFDSGIGGLTVAYAVNQLLPNESIIYFGDTAHFPYGDKSTAAIQSYAVKITDMLL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPS--MAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ + +IACN+A + ++ S P ++ A G + ++ T
Sbjct: 65 QQH-CKVILIACNSASSAAYQLVKEYAGSRAKVINVIDPIVRYVGAKYPKGKVGLIGTKK 123
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ I + + +++ +LA +EE I E I +K
Sbjct: 124 TVSSNVYQRKIDKLNKEITLKALATPLLAPMIEEGYFNNAISESI----ILNYLQDKSLD 179
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
+ ++L CTHYPLI L VD +D+SD +A + L N T H
Sbjct: 180 GIESLILGCTHYPLIKEQINNLYKGSVDVIDSSDIVAAAVKDYLADTNLLNTDADVQHKF 239
Query: 251 FLSGKPDIAMRRLMQGF 267
++S F
Sbjct: 240 YVSDYTQSFAESTRLFF 256
>gi|256372517|ref|YP_003110341.1| glutamate racemase [Acidimicrobium ferrooxidans DSM 10331]
gi|256009101|gb|ACU54668.1| glutamate racemase [Acidimicrobium ferrooxidans DSM 10331]
Length = 276
Score = 209 bits (531), Expect = 5e-52, Method: Composition-based stats.
Identities = 51/253 (20%), Positives = 91/253 (35%), Gaps = 8/253 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L +R L+P +Y D PYG+ + + + + ++D+
Sbjct: 9 PIGVFDSGFGGLNILAALRDLLPSEDLVYFGDSARSPYGSRPADEVVRFSLEIGRWLVDE 68
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L V+ CNTA + D LR+ + A SG + ++ T T+
Sbjct: 69 AGSKLVVVGCNTASAVALDALRAELAVPVIGVVGAGARAARRCVGSGRVGVIGTERTIAS 128
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ V+ L VE + ++ I +V
Sbjct: 129 GAYQRALADDAG----VAVACPGLVEFVE----AGQTTGPAVRAVIADRLAPVVDAGVEV 180
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
++L CTHYP + + + V + ++ A L ++ + SG
Sbjct: 181 LLLGCTHYPYLAREIQAVVGEQVTLVSPAEEAAFEVAQRLGADGLARSGAVGSLRVACSG 240
Query: 255 KPDIAMRRLMQGF 267
P + + F
Sbjct: 241 DPVVFREIGGRLF 253
>gi|90423117|ref|YP_531487.1| glutamate racemase [Rhodopseudomonas palustris BisB18]
gi|90105131|gb|ABD87168.1| glutamate racemase [Rhodopseudomonas palustris BisB18]
Length = 265
Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats.
Identities = 102/260 (39%), Positives = 151/260 (58%), Gaps = 2/260 (0%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+IL+FDSG+GGL VL+++ P+ ++YVADD FPYG + AL R++ L
Sbjct: 1 MPASPTILVFDSGLGGLTVLREIVKARPDAGYVYVADDAFFPYGQHGEDALIARVVPLIG 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+++ ++P L VIACNTA TL+ LR+ + + F+G VPAIK A A +++ +S+L T
Sbjct: 61 ELIAAHRPDLVVIACNTASTLVLSHLRAAYK-VPFVGTVPAIKPACAASRTKRVSVLGTS 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++R YT LI + C + LV S LA+ E G + + +I EI CF++ G
Sbjct: 120 GTVKREYTRALIRDFAQACKVTLVGSAHLAALAEAALAGASVGDAQILAEIAPCFVDDGG 179
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
RTD +VLACTH+PL++ L+PWPVDW+D + +IARR LL +
Sbjct: 180 ARTDAVVLACTHFPLLLDRLVALAPWPVDWIDPAPAIARRVANLLGGGVGGAAGAPREAR 239
Query: 250 -LFLSGKPDIAMRRLMQGFG 268
+F SG+ A L+ FG
Sbjct: 240 LIFTSGRRHPASGALLPFFG 259
>gi|325955658|ref|YP_004239318.1| glutamate racemase [Weeksella virosa DSM 16922]
gi|323438276|gb|ADX68740.1| Glutamate racemase [Weeksella virosa DSM 16922]
Length = 269
Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats.
Identities = 55/257 (21%), Positives = 103/257 (40%), Gaps = 6/257 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL ++++ L+P+ +Y D PYG A+KK + + L
Sbjct: 5 NRPIGVFDSGVGGLNFAKEIKRLLPKESIVYFGDTKHLPYGEKSAEAIKKYSKEI-TQFL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRST-FPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
++ACNTA + ++ + + + + + AY I +++T AT
Sbjct: 64 ISQNCKAILVACNTATANAIEIIKEVAGEEILVVDVINPVAEKVAYELRTKIGVIATKAT 123
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ I + + V++ +L +EE + + +E K+ +
Sbjct: 124 VNSCAYKKTIRKFNKHIKVVEVATPLLVPIIEEGLYNTNVS----RAVLEVYLSNKKLEG 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D I+L CTHYPLI Q+ V +++ + L + + +
Sbjct: 180 IDSIILGCTHYPLIQKEIEQIFEGKVQVINSPLIVVNCLIYQLHQRQQLANNNNPYYLFY 239
Query: 252 LSGKPDIAMRRLMQGFG 268
LS D + + FG
Sbjct: 240 LSDYTDNFHKISKRFFG 256
>gi|315080007|gb|EFT51983.1| glutamate racemase [Propionibacterium acnes HL078PA1]
Length = 248
Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats.
Identities = 55/245 (22%), Positives = 100/245 (40%), Gaps = 7/245 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + I IFDSG GGL V + + LMP +Y+ D PYG +++ +
Sbjct: 9 VDSPIGIFDSGFGGLTVARSVVDLMPNEDIVYLGDTDRAPYGEKTIADVRQYALQCLDR- 67
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + +IACNTA + + + R + +PA ++A+A T++G I ++ T AT
Sbjct: 68 LVAHGVKALLIACNTASSAVLRDARERYGVPVIDVIMPAARRASAATRNGRIGVICTEAT 127
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
R + + + + + VE+ E++ +
Sbjct: 128 ARSLSYEDALAAV-PGITLTTQACPKFVPFVEDGITSG----PELETIAREYLAPIQEAG 182
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++L CTHYPL+ + + V + +S AR + L+ + + F
Sbjct: 183 CDTLILGCTHYPLLAGLISYVLGDGVTLISSSHQCARASYSLMVESGLLHSHPRESSRYF 242
Query: 252 -LSGK 255
+G
Sbjct: 243 LTTGN 247
>gi|332877978|ref|ZP_08445709.1| glutamate racemase [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332684082|gb|EGJ56948.1| glutamate racemase [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 272
Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats.
Identities = 56/254 (22%), Positives = 108/254 (42%), Gaps = 9/254 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG + +++ LMP + +++AD+ PYG + + L
Sbjct: 10 PIGLFDSGVGGTTIWKEINALMPNENTLFLADNKNAPYGEKTKEEIIALCDAN-TQFLLN 68
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ + V+ACNT T LR + + F+G PAIK A + + I +L+T TL
Sbjct: 69 HNAKIIVVACNTGTTNAIAYLRDKYKQVPFIGIEPAIKPAGLQSITKKIGVLATRRTLTS 128
Query: 135 TYTSNLIHSYVSQ--CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + I L +E +++ ++ ++ +
Sbjct: 129 DLFAKTSEHLKQEEKIEIIEQVGEGLVDLIE----AGQMESAKMTALLQKYLQPMVAEGI 184
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF--DDHAL 250
D +VL CTHYP ++ ++ P + +D+ ++AR+ R +L + + + H
Sbjct: 185 DYLVLGCTHYPYLLPQIQRFIPVSIKVIDSGYAVARQTRNILAQYHLLNEKQDYVATHKW 244
Query: 251 FLSGKPDIAMRRLM 264
+G +I +
Sbjct: 245 VTNGNLEILKQFAA 258
>gi|262392932|ref|YP_003284786.1| glutamate racemase [Vibrio sp. Ex25]
gi|262336526|gb|ACY50321.1| glutamate racemase [Vibrio sp. Ex25]
Length = 267
Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats.
Identities = 83/260 (31%), Positives = 134/260 (51%), Gaps = 10/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L+FDSG+GGL V Q++ L+P+ ++Y+ D+ +PYG + L R+ L S ++
Sbjct: 6 KKKVLVFDSGVGGLSVFQEIHRLLPQLDYLYLFDNQAYPYGELDQAVLISRVNQLVSSLV 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+++Q + VIACNTA T++ LR S+ +G VPAIK A+ S + +++TPAT+
Sbjct: 66 EEHQVDIVVIACNTASTIVLPSLRENL-SIPVVGVVPAIKPASLL-ASKGVGLIATPATV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R YT LI + + L+ S L EE G + DE+ K + K
Sbjct: 124 TRQYTHELIRDFAQGKPVELLGSTRLVDMAEEKLRGNSVSLDELTKI----LLPLRDK-V 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
DV VL CTH+PLI Q V +D+ +IARR + LL + + +++
Sbjct: 179 DVAVLGCTHFPLIKEEIHQALGEDVTLIDSGAAIARRVKALL-LSDEIEDTEEGSKSIYA 237
Query: 253 SGKP--DIAMRRLMQGFGLK 270
S P + A+ ++ G
Sbjct: 238 SATPWQEDALNICLKELGFN 257
>gi|303231315|ref|ZP_07318051.1| glutamate racemase [Veillonella atypica ACS-049-V-Sch6]
gi|302514045|gb|EFL56051.1| glutamate racemase [Veillonella atypica ACS-049-V-Sch6]
Length = 269
Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats.
Identities = 61/254 (24%), Positives = 109/254 (42%), Gaps = 7/254 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GGL VL+ ++ P +FIY+ D+ P GN + + + L +
Sbjct: 10 PIGVFDSGVGGLSVLKVLQEQFPNENFIYIGDNANNPVGNRPTEEITEIACRIAE-TLHQ 68
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L VIACNT + DE+RS ++ +G +K A + S I I++T AT+
Sbjct: 69 VPVKLMVIACNTFTVVALDEVRSRV-NVPVIGVSQGVKTAIRESNSNTIGIMATVATVNS 127
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + + LA +E+ + +D ++K + + DV
Sbjct: 128 HIHKYVAMDIDHEVFVWEQPCPELAGLIEQ----GHLHDDAVRKAAKEYLAPMLERDIDV 183
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-ALFLS 253
+VL CTH+P + V ++LS + ++D + + R + + H H L+ +
Sbjct: 184 VVLGCTHFPFVSPVLQELSGDRIRYIDPAYETSDLVRRTMDSNHLHNPSTEKGHSTLYFT 243
Query: 254 GKPDIAMRRLMQGF 267
+ Q
Sbjct: 244 KDIALGADLGAQFL 257
>gi|269968664|ref|ZP_06182661.1| glutamate racemase [Vibrio alginolyticus 40B]
gi|269826751|gb|EEZ81088.1| glutamate racemase [Vibrio alginolyticus 40B]
Length = 267
Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats.
Identities = 83/260 (31%), Positives = 133/260 (51%), Gaps = 10/260 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L+FDSG+GGL V Q++ L+P+ ++Y+ D+ +PYG + L R+ L S ++
Sbjct: 6 KKKVLVFDSGVGGLSVFQEIHRLLPQLDYLYLFDNQAYPYGELDQAVLISRVNQLVSSLV 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+++Q + VIACNTA T++ LR S+ +G VPAIK A+ S + +++TPAT+
Sbjct: 66 EEHQVDIVVIACNTASTIVLPSLRENL-SIPVVGVVPAIKPASLL-ASKGVGLIATPATV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R YT LI + + LV S L EE G + DE+ + K
Sbjct: 124 TRQYTHELIRDFAQGKPVELVGSTRLVDMAEEKLRGNSVSLDELTNI----LLPLRDK-V 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
DV VL CTH+PLI Q V +D+ +IARR + LL + + +++
Sbjct: 179 DVAVLGCTHFPLIKEEIHQALGGDVTLIDSGAAIARRVKALL-LSDEIEDTEEGSKSIYA 237
Query: 253 SGKP--DIAMRRLMQGFGLK 270
S P + A+ ++ G
Sbjct: 238 SATPWQEDALNICLKKLGFN 257
>gi|328953591|ref|YP_004370925.1| Glutamate racemase [Desulfobacca acetoxidans DSM 11109]
gi|328453915|gb|AEB09744.1| Glutamate racemase [Desulfobacca acetoxidans DSM 11109]
Length = 267
Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats.
Identities = 51/261 (19%), Positives = 100/261 (38%), Gaps = 13/261 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL VL++ +P+Y ++Y+ D+ PYG D + K L +
Sbjct: 2 IGVFDSGFGGLAVLREFLQALPDYDYLYLGDNARIPYGTRSDQVVLKFTRQAVD-YLFRQ 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLG------AVPAIKQAAAYTQSGLISILSTP 129
+L ++AC+TA + ++ + + + +P +++A + T SG I I+ T
Sbjct: 61 GCILIILACHTASSKALRTIQQYYLPVHYPNNRVLGVVIPTVEEALSRTVSGRIGIIGTE 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ +H + + +L +E ++ + + E
Sbjct: 121 GTVASNSFPIELHKLNPGVQVFQQACPLLVPIIEAGEQDGEVADL----MLNKYLGPFEA 176
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF--DD 247
R D ++L CTHY ++ + L + + + + A + L R R+
Sbjct: 177 HRIDTLILGCTHYSILKTKIKNLLGQKIQIICSGEVTAVKLADYLRRHPEINQRLSRTGQ 236
Query: 248 HALFLSGKPDIAMRRLMQGFG 268
+ G
Sbjct: 237 RHYLTTDLTPRFQDLASLFMG 257
>gi|257451947|ref|ZP_05617246.1| glutamate racemase [Fusobacterium sp. 3_1_5R]
gi|317058497|ref|ZP_07922982.1| glutamate racemase [Fusobacterium sp. 3_1_5R]
gi|313684173|gb|EFS21008.1| glutamate racemase [Fusobacterium sp. 3_1_5R]
Length = 261
Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats.
Identities = 64/242 (26%), Positives = 109/242 (45%), Gaps = 6/242 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSGIGGL VL + ++P+ +FIY AD PYG + K L K
Sbjct: 2 KIGVFDSGIGGLSVLHQAMQMLPQENFIYYADVDHVPYGTKTKEEIIKYTSEAVD-FLVK 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
VIACNTA + ELR + S+ +G PA+K+A + + +++TP T++
Sbjct: 61 EGVKAIVIACNTATSAAIQELRERY-SLPIIGMEPAVKKAIDFHPEKRVLVIATPMTVQG 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
NLI ++ + ++ L + E +++ + ++ F + +
Sbjct: 120 EKLHNLIEKVDTEHLVDAIALPKLVTFAE----EEMFEDEVVSAYLQEEFKQLNLEDYSS 175
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
IVL CTH+ ++L P V +LD ++ ++ L IN + + SG
Sbjct: 176 IVLGCTHFNYFKESLKKLLPKGVKFLDGNEGTIKKLISELENINALEKNEKRKIEYYYSG 235
Query: 255 KP 256
+
Sbjct: 236 RK 237
>gi|89074505|ref|ZP_01160982.1| glutamate racemase [Photobacterium sp. SKA34]
gi|89049793|gb|EAR55343.1| glutamate racemase [Photobacterium sp. SKA34]
Length = 270
Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats.
Identities = 83/250 (33%), Positives = 133/250 (53%), Gaps = 7/250 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I+IFDSG+GGL V +++ L+P+ +IY D+ FPYG D+ L +R + S +++
Sbjct: 5 KKIVIFDSGVGGLSVYKEIYDLLPQVQYIYAFDNAAFPYGELPDNVLIERTNHIVSTLVE 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+YQ L VIACNTA T++ LR ++ +G VPAIK AA +Q+ +I +L+TPAT++
Sbjct: 65 QYQADLVVIACNTASTIVLPTLRQNL-NIPIVGVVPAIKPAAKLSQTKVIGLLATPATVK 123
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT LI+ + S C + ++ S L E+ G I E+ + + ++ D
Sbjct: 124 REYTQQLINQFASDCEVKMIGSTRLVEMAEQKLRGEAISLHELSEILAPW-----QQQVD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL-FL 252
I+L CTH+PLI + + V +D+ +IA R LL + R + L +
Sbjct: 179 SIILGCTHFPLIKEEIKAVLNNEVSIVDSGKAIAVRVSSLLGLSEQEKQRHNEIINLTYS 238
Query: 253 SGKPDIAMRR 262
S +
Sbjct: 239 SAATESVAAL 248
>gi|261337748|ref|ZP_05965632.1| glutamate racemase [Bifidobacterium gallicum DSM 20093]
gi|270277201|gb|EFA23055.1| glutamate racemase [Bifidobacterium gallicum DSM 20093]
Length = 258
Score = 208 bits (529), Expect = 9e-52, Method: Composition-based stats.
Identities = 60/260 (23%), Positives = 101/260 (38%), Gaps = 7/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I +FDSG+GGL V++++R +P H +Y D PYG +++ +
Sbjct: 1 MASSAPIGVFDSGLGGLSVVRQIREDLPNEHVLYFGDSAHAPYGVKTPDEVRELSFGIVD 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--S 127
+ + + VIACNTA + +ELR T+ + +G PA+K A Q +I+ +
Sbjct: 61 NFV-RQGAKAIVIACNTATSAAVNELRDTY-DVPIIGMEPALKVAVDRGQGQRQNIIVAA 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T TLR L+ + + IH + L VE + + +
Sbjct: 119 TELTLRERKFEQLMQRFEADHTIHRLPCPDLVEIVEHGQLD---DTALVDATLRRYLHDY 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+ D IVL CTH+ F+++ P +D + A R +L +
Sbjct: 176 DLDTIDAIVLGCTHFVFYRDAFQRIVPEHTAIIDGNAGTAHHLRVVLESLGALAPEDQQG 235
Query: 248 HALFLSGKPDIAMRRLMQGF 267
+ M L
Sbjct: 236 GVSVTNSDTSAQMANLAHKL 255
>gi|88799058|ref|ZP_01114639.1| glutamate racemase [Reinekea sp. MED297]
gi|88778285|gb|EAR09479.1| glutamate racemase [Reinekea sp. MED297]
Length = 257
Score = 208 bits (529), Expect = 9e-52, Method: Composition-based stats.
Identities = 74/238 (31%), Positives = 111/238 (46%), Gaps = 12/238 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL +R L+P+ IYVAD PYG+ + + +R + S L +
Sbjct: 2 IGVFDSGLGGLTVLNSIRSLLPDQALIYVADQAYTPYGDQSEATVTQRSREI-SQWLIEQ 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L VIACNTA + D+LR F S+ +G P +K AA +++ I IL+T T+
Sbjct: 61 GCQLIVIACNTATAIAIDQLRREF-SVPIVGVEPGVKPAALLSRTRKIGILATENTVASQ 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
LI +++ + LA +E + I ++ + D +
Sbjct: 120 RYQRLIQAFLPNVQVISQGCSGLADAIES-------DPEAIPALLQKYLCPLLDEGVDQV 172
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
VL CTHYPLI QL+ +D SD+IA R LP + D + +
Sbjct: 173 VLGCTHYPLIRSQIEQLAGARARVIDTSDAIAMEVRRRLPAK---TSNDVVDVRWYTT 227
>gi|237809706|ref|YP_002894146.1| glutamate racemase [Tolumonas auensis DSM 9187]
gi|237501967|gb|ACQ94560.1| glutamate racemase [Tolumonas auensis DSM 9187]
Length = 274
Score = 207 bits (528), Expect = 9e-52, Method: Composition-based stats.
Identities = 84/262 (32%), Positives = 134/262 (51%), Gaps = 5/262 (1%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
++ +IL+FDSG+GGL + Q++R +P + + YV D+ FPYG +H + R L
Sbjct: 10 RINVNILLFDSGMGGLSIYQEVRRRLPGHRYDYVFDNAFFPYGEQPEHIITARCCLLIEH 69
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ + Q L VIACNTA T++ LR ++ +G VPAIK AAA T++G I +L+TPA
Sbjct: 70 LVSERQIDLVVIACNTASTIVLPALRERL-AIPVVGVVPAIKPAAALTRNGSIGLLATPA 128
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++R YTS LI + + C + + L + E G + E I ++
Sbjct: 129 TVQRPYTSQLIAQFATHCQVLKLGVTELVVQAERKMAGYDVDEQAIHLALQPLLTHAMPP 188
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D +VL CTH+PL+ ++ P + +D+ +IA+R LL A
Sbjct: 189 --DTLVLGCTHFPLLKEEICRIMP-GIQLVDSGAAIAKRVAALLQGKIASDVTDTAGQAF 245
Query: 251 FLSGKPDIAMR-RLMQGFGLKS 271
PD + R++ +G S
Sbjct: 246 CTLLDPDAHKKSRILVEYGFHS 267
>gi|313675673|ref|YP_004053669.1| glutamate racemase [Marivirga tractuosa DSM 4126]
gi|312942371|gb|ADR21561.1| glutamate racemase [Marivirga tractuosa DSM 4126]
Length = 270
Score = 207 bits (528), Expect = 9e-52, Method: Composition-based stats.
Identities = 61/260 (23%), Positives = 107/260 (41%), Gaps = 7/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K I IFDSGIGGL V K++ LMP +Y D PYG+ A++ + +
Sbjct: 3 KDNSAPIGIFDSGIGGLTVAHKVKELMPNESMVYFGDIAHLPYGDKSAAAIQAYSIK-VT 61
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMA--FLGAVPAIKQAAAYTQSGLISILS 127
D+L + L +IACN+A + + +R S A F P ++ + + + ++
Sbjct: 62 DVLLQQGCKLILIACNSASSAAFELVREYVGSKAKVFNVIDPVVEHVSQHYNKQKVGLIG 121
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+ + + + +++ +L +EE +I D IE ++
Sbjct: 122 TKQTVNSNAYESRLKQLNPDIELKSLATPLLVPMIEEGFFENRISHDI----IEAYLHDE 177
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+ + ++L CTHYPLI + + VD LD++ +A+R + L
Sbjct: 178 ALEEIEALILGCTHYPLIKNEIDKFYGGKVDILDSATIVAKRLQQFLKEHTLLSENKIRK 237
Query: 248 HALFLSGKPDIAMRRLMQGF 267
+S F
Sbjct: 238 DRFLVSDITASFEASAKIFF 257
>gi|261249981|ref|ZP_05942558.1| glutamate racemase [Vibrio orientalis CIP 102891]
gi|260939485|gb|EEX95470.1| glutamate racemase [Vibrio orientalis CIP 102891]
Length = 267
Score = 207 bits (528), Expect = 9e-52, Method: Composition-based stats.
Identities = 83/263 (31%), Positives = 136/263 (51%), Gaps = 11/263 (4%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K Q ILIFDSG+GGL V Q+++ +P+ ++Y+ D+ +PYG + L R+ L +
Sbjct: 5 SKQQAKILIFDSGVGGLSVYQEIQSKLPQLEYLYIFDNEAYPYGELDHDTLIDRVDRLVT 64
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
++ K+ L VIACNTA T++ LR+ ++ +G VPAIK A+ + + +++TP
Sbjct: 65 SLVAKHHIDLVVIACNTASTIVLPTLRAKL-TIPVVGVVPAIKPASNL-ANKAVGLIATP 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ R YT +LI + + L+ S L EE G + E+K+ +
Sbjct: 123 ATVTRPYTHDLIRDFSQSKPVELLGSTRLVDIAEEKLRGKAVDLAELKQILAA-----IE 177
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+ DV VL CTH+PLI + + V +D+ ++IARR LL +TR
Sbjct: 178 NKVDVAVLGCTHFPLIKQEIQAVLTDRVLLVDSGEAIARRVEDLLETTGKKETR--GKRE 235
Query: 250 LFLSGKP--DIAMRRLMQGFGLK 270
+F + P + A+ + + G
Sbjct: 236 IFSTAPPWEEGALNKALHQLGFS 258
>gi|170740490|ref|YP_001769145.1| glutamate racemase [Methylobacterium sp. 4-46]
gi|168194764|gb|ACA16711.1| glutamate racemase [Methylobacterium sp. 4-46]
Length = 290
Score = 207 bits (528), Expect = 9e-52, Method: Composition-based stats.
Identities = 100/243 (41%), Positives = 149/243 (61%), Gaps = 2/243 (0%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
++L+FDSG+GGL VL ++R P+ +Y ADD FPYG+ + L R++ + ++
Sbjct: 21 PAVLVFDSGLGGLTVLSELRRARPDARIVYAADDAAFPYGDLSEEMLVARVVAVMERLVA 80
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ P L V+ACNTA TL+ LR+ F ++ F+G VPAIK AAA T++G IS+L+TP T+R
Sbjct: 81 AHAPDLVVVACNTATTLVLPALRARF-AVPFVGTVPAIKPAAAATRTGRISVLATPGTVR 139
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT LI +Y C + LV + LA+ E G + +D +++EI CF+ + RTD
Sbjct: 140 RDYTRELIDAYAGTCAVTLVGATRLAALAEADLAGCPVDDDVLREEIAPCFVGEGSARTD 199
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALFL 252
V+VL CTHYPL++ F +L+PWPV W+D + ++ARR LL A+F
Sbjct: 200 VVVLGCTHYPLLLARFERLAPWPVTWIDPAPAVARRMAALLGPAPRGTDPEATPGLAVFT 259
Query: 253 SGK 255
G+
Sbjct: 260 GGE 262
>gi|145220321|ref|YP_001131030.1| glutamate racemase [Prosthecochloris vibrioformis DSM 265]
gi|145206485|gb|ABP37528.1| glutamate racemase [Chlorobium phaeovibrioides DSM 265]
Length = 271
Score = 207 bits (528), Expect = 9e-52, Method: Composition-based stats.
Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 7/250 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q+ I IFDSG+GGL VL+ M+ L+P +Y D PYG +++ + IL
Sbjct: 8 QSPIGIFDSGVGGLTVLKAMQKLLPSEQLLYFGDTARVPYGTKSQVTIRRYAEED-TRIL 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPAT 131
++QP + ++ACNT L D + T + LG + A A T++G I ++ T AT
Sbjct: 67 LRHQPKMIIVACNTVSALALDVVEKTADPLPVLGVLEAGADTAVEVTRTGRIGVIGTQAT 126
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + I+ + + + + E + + + +
Sbjct: 127 ISSNAYAYAINQASADSEVFSTACPLFVPLAE----EGMLNNEATRLIAREYLAPLLAEE 182
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-AL 250
D +VL CTHYP++ + + + V +D+++++A RA LL + L
Sbjct: 183 IDTLVLGCTHYPILRTIIEETAGTGVTIIDSAEAVAARAAALLRNTGMEASGTRATIPHL 242
Query: 251 FLSGKPDIAM 260
+S P
Sbjct: 243 MVSDLPQKFS 252
>gi|90581103|ref|ZP_01236903.1| glutamate racemase [Vibrio angustum S14]
gi|90437799|gb|EAS62990.1| glutamate racemase [Vibrio angustum S14]
Length = 270
Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats.
Identities = 82/260 (31%), Positives = 137/260 (52%), Gaps = 11/260 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I+IFDSG+GGL V +++ L+P+ +IY D+ FPYG D+ L +R + S +++
Sbjct: 5 KKIVIFDSGVGGLSVYKEIYDLLPQVQYIYAFDNAAFPYGELADNILIERTNHIVSALVE 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+Y+ L VIACNTA T++ LR ++ +G VPAIK AA + + +I +L+TPAT++
Sbjct: 65 QYKADLVVIACNTASTIVLPTLRQNL-NIPIVGVVPAIKPAAKLSNTKVIGLLATPATVK 123
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT LI+ + S C + ++ S L E+ G I +E+ + + ++ D
Sbjct: 124 REYTQQLINQFASDCEVKMIGSTRLVEMAEQKLRGESISLNELSEILAPW-----QQQVD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL--LPRINTHQTRVFDDHALF 251
I+L CTH+PLI + + V +D+ +IA R L L ++ +
Sbjct: 179 SIILGCTHFPLIKEEIKAVLRNEVSVVDSGKAIALRVSSLLGLSEQEKQPCNKINNLT-Y 237
Query: 252 LSGKPD--IAMRRLMQGFGL 269
S A+ + ++ GL
Sbjct: 238 SSAATQSVAALNKSLRQIGL 257
>gi|154491820|ref|ZP_02031446.1| hypothetical protein PARMER_01441 [Parabacteroides merdae ATCC
43184]
gi|154088061|gb|EDN87106.1| hypothetical protein PARMER_01441 [Parabacteroides merdae ATCC
43184]
Length = 278
Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats.
Identities = 56/261 (21%), Positives = 93/261 (35%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG GGL + K+R MP Y +IY+ D+ PYG + + L
Sbjct: 8 PIGIFDSGYGGLTIFDKIRAAMPGYDYIYLGDNARSPYGTRSFEVVYRFTKQAVE-TLFN 66
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ACNTA + + +L P+ LG + P ++ ++S + IL T
Sbjct: 67 EGCQLVILACNTASAKALRTIQQRDLPQWDPARRVLGVIRPTVELMDKISKSKHVGILGT 126
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+ S I + + + VE + ++K +E
Sbjct: 127 TGTITSDSYSLEIKKMFPHMTVTGEACPMWVPLVENNEFDSPGADYFVRKHLEHILAA-- 184
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFD 246
D +VL CTHYPL++ + P + + +A L R +
Sbjct: 185 DPEIDTLVLGCTHYPLLIEKIKAFLPEGITLFSQGEYVAASLTDYLRRHPEMDIRLTKQG 244
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ +
Sbjct: 245 NCRFLTTESAAKFSDAASVFL 265
>gi|83647752|ref|YP_436187.1| glutamate racemase [Hahella chejuensis KCTC 2396]
gi|83635795|gb|ABC31762.1| glutamate racemase [Hahella chejuensis KCTC 2396]
Length = 271
Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats.
Identities = 81/258 (31%), Positives = 125/258 (48%), Gaps = 7/258 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
LI DSG GGL + +R P +Y+AD +PYG+ + ++ R+ + + +
Sbjct: 14 PALIIDSGSGGLSIWGHIRRHTPWLPTLYLADFGFYPYGDKSEQEIETRVRHIVEQVCEC 73
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
Y L V+ACNTA T++ D LR+ F +G VPAIK AA +T+ +I +L+T T+RR
Sbjct: 74 YPAQLIVVACNTASTVVLDHLRARFQQ-PVVGVVPAIKTAATHTKKQVIGLLATQGTVRR 132
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
YT LI + C + V + L E++ G ++ I+ D
Sbjct: 133 AYTDELIRDFARHCQVIKVGAPDLVQWGEDWVRGRSPDMARLRGVIQ----PFLEAEADQ 188
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VL CTH+PL+ QL+P ++W+D+ ++IARR LL + H F SG
Sbjct: 189 VVLGCTHFPLLKPFLYQLAP-DINWVDSGEAIARRVAYLLQAQQSEGGEESTSHRAFYSG 247
Query: 255 KPDIAM-RRLMQGFGLKS 271
+ R G S
Sbjct: 248 DKQDSEWERGAMALGFSS 265
>gi|157959995|ref|YP_001500029.1| glutamate racemase [Shewanella pealeana ATCC 700345]
gi|189030371|sp|A8GYV7|MURI_SHEPA RecName: Full=Glutamate racemase
gi|157844995|gb|ABV85494.1| glutamate racemase [Shewanella pealeana ATCC 700345]
Length = 268
Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats.
Identities = 81/261 (31%), Positives = 131/261 (50%), Gaps = 10/261 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ ILIFDSGIGGL + ++R ++P+ Y+ D+ PYG E+ L K + L +
Sbjct: 1 MFGPILIFDSGIGGLSIFDEIRKVLPDQDCCYLFDNARLPYGELEESVLIKGCVELICEQ 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
K L V+ACN+A TL+ LR S+ +G VPAIK AA + + I +L+TP T
Sbjct: 61 ALKIDASLVVVACNSASTLVLPGLRERL-SIPIVGVVPAIKPAAKLSIARHIGLLATPGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R+YT LI + C + L S L E G + +++ ++E +
Sbjct: 120 IKRSYTRELIEQFADGCKVELFGSSELVMLAEAKLAGESVDLIKLRAQLE----PIRQSK 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ---TRVFDDH 248
D +VL CTH+P+I +Q+ V LD+ +IA+R LL + + R +
Sbjct: 176 LDTLVLGCTHFPIIASEMQQILGNGVKLLDSGVAIAQRVVFLLNEFSLDKVVDNRTKNLT 235
Query: 249 ALFLSGKPDIAM--RRLMQGF 267
A++ + + + R +GF
Sbjct: 236 AIYTTAEISAGLTTRLAEKGF 256
>gi|154507589|ref|ZP_02043231.1| hypothetical protein ACTODO_00069 [Actinomyces odontolyticus ATCC
17982]
gi|153797223|gb|EDN79643.1| hypothetical protein ACTODO_00069 [Actinomyces odontolyticus ATCC
17982]
Length = 276
Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats.
Identities = 55/265 (20%), Positives = 95/265 (35%), Gaps = 14/265 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I IFDSG+GGL V + + +P+ IY+ D PYG ++ + +
Sbjct: 2 NNAPIGIFDSGLGGLTVARAVIDKLPDEEIIYLGDTEHTPYGPRAIAQVRSLTLSALDE- 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTF----PSMAFLGAVPAIKQAAAYTQSGLISILS 127
L VIACNTA + R + PA +Q+ T++ + ++
Sbjct: 61 LASRGVKALVIACNTATAAALADARERYWIDAGIPVVEVITPAARQSVIATRNHHVGVIG 120
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT++ + + + + VE +EI+
Sbjct: 121 TKATIQSEAYLRALAAV-PGLTVSQQACPAFVDFVEAGVT----TGEEIEAVAREYLTPL 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT----R 243
+ D ++L CTHYPL+ V ++ V + +S++ A L
Sbjct: 176 KEAGVDTLILGCTHYPLLTGVIGRIMGERVTLVTSSEATANVTYNELVDRGLLHDPWPAG 235
Query: 244 VFDDHALFLSGKPDIAMRRLMQGFG 268
H +G D+ R + G
Sbjct: 236 EGPQHQFLATGASDLFPRLARRFLG 260
>gi|262172913|ref|ZP_06040591.1| glutamate racemase [Vibrio mimicus MB-451]
gi|261893989|gb|EEY39975.1| glutamate racemase [Vibrio mimicus MB-451]
Length = 265
Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats.
Identities = 80/265 (30%), Positives = 136/265 (51%), Gaps = 15/265 (5%)
Query: 12 LQNS----ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ + +LIFDSG+GGL V +++ +P+ +IY+ D+ +PYG L R+ L
Sbjct: 1 MSSPSFPRVLIFDSGVGGLSVYREIEARLPQLSYIYLFDNAAYPYGELAQETLIARVDTL 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ ++++ + L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++
Sbjct: 61 VTRMVEQERIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLIA 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TPAT++R YT LI + + ++ L+ S L + EE G + +E++ +
Sbjct: 119 TPATVKRQYTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELENILHP----- 173
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
DV VL CTH+PLI +Q+ V +D+ +IARR + LL
Sbjct: 174 LKHTIDVAVLGCTHFPLIKEEIQQVLGEQVQLIDSGLAIARRVQELLGIDKG--EGENQK 231
Query: 248 HALFLSGKP--DIAMRRLMQGFGLK 270
H ++ S P + A+ ++ G
Sbjct: 232 HHIYASAPPWEESALNIKLKELGFN 256
>gi|156935905|ref|YP_001439821.1| glutamate racemase [Cronobacter sakazakii ATCC BAA-894]
gi|156534159|gb|ABU78985.1| hypothetical protein ESA_03799 [Cronobacter sakazakii ATCC BAA-894]
Length = 253
Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats.
Identities = 76/249 (30%), Positives = 131/249 (52%), Gaps = 4/249 (1%)
Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82
+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y L+VI
Sbjct: 1 MGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVEIVTAVQARYPLALAVI 60
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACN+A T+ LR F + +G VPAIK AA T +G++ +L+T T++R YT LI
Sbjct: 61 ACNSASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGMVGLLATRGTVKRPYTHELIA 119
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++C I ++ S L E G + + +++ + E D +VL CTH+
Sbjct: 120 RFANECQIEMLGSAELVEIAEAKLHGEPVSLEALRRVLRPWLRMPEPP--DTVVLGCTHF 177
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAM-R 261
PL+ Q+ P +D+ +IARR LL ++ A ++ P++A
Sbjct: 178 PLLAEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDACSSDENIAYCMALTPEVAQLM 237
Query: 262 RLMQGFGLK 270
++Q +G
Sbjct: 238 SVLQRYGFN 246
>gi|320354870|ref|YP_004196209.1| glutamate racemase [Desulfobulbus propionicus DSM 2032]
gi|320123372|gb|ADW18918.1| glutamate racemase [Desulfobulbus propionicus DSM 2032]
Length = 262
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 63/256 (24%), Positives = 107/256 (41%), Gaps = 8/256 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GG+ V + + P + +Y+ D PYG+ + + L +
Sbjct: 2 IGIFDSGVGGMTVARAIEQFCPGFPLVYLGDLARTPYGSKSPAMITEYSHRNTD-FLLRQ 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L VIACN+A + LRS + + PA+ +AA + +G I ++ T AT+
Sbjct: 61 GAKLIVIACNSAASTASSFLRSHYHQLIIDVIFPAVDRAAGESVNGRIGVIGTRATINSG 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ + C ++ + +L VE ++ E K ++ K+ D +
Sbjct: 121 LYEQRLQAARPDCKVYSQACPLLVPLVE----EGWLERRETKMIVKKYLHPLRDKQIDTL 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDH--ALFL 252
+L CTHYPL+ V +D+S +A + LL + Q+ D F+
Sbjct: 177 ILGCTHYPLLKKTIAPRIGRRVHIIDSSVEVALHLKTLLDSDHDLRQSLYAPDTPSRFFV 236
Query: 253 SGKPDIAMRRLMQGFG 268
S P + FG
Sbjct: 237 SDIPSPVHALASKIFG 252
>gi|288928934|ref|ZP_06422780.1| glutamate racemase [Prevotella sp. oral taxon 317 str. F0108]
gi|288329918|gb|EFC68503.1| glutamate racemase [Prevotella sp. oral taxon 317 str. F0108]
Length = 279
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 56/273 (20%), Positives = 101/273 (36%), Gaps = 14/273 (5%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
++N+P + I +FDSG GGL +L +R L+P+Y ++Y+ D+ PYG + +
Sbjct: 1 MNNFPQQAG---PIGVFDSGYGGLTILHGIRQLLPQYDYLYLGDNARAPYGPRSFDVVYQ 57
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTF------PSMAFLGAVPAIKQAAA 116
L + L +I CNTA ++ P + +
Sbjct: 58 FTRQAVVK-LFEQGCHLIIIGCNTASAKALRSIQQRDLPSLDAKRRVLGIIRPTAESIGS 116
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
T + + IL+T T++ I + ++ + A+ VE + +
Sbjct: 117 LTSTRHVGILATEGTIKSDSYRLEIQKLFPDIVVQGMACPLWAAIVEANEADSPGADYFV 176
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
KK I+ + + D IVL CTHYPL+++ + P V + + +A + L R
Sbjct: 177 KKRIDSLL--RTDPQIDAIVLGCTHYPLLMNSIVKHVPPGVRIVPQGEYVANSLQQYLQR 234
Query: 237 INTHQ--TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ D
Sbjct: 235 HPEIDALCTKHGTARYLTTENKDKFKENAQIFL 267
>gi|283853806|ref|ZP_06371029.1| glutamate racemase [Desulfovibrio sp. FW1012B]
gi|283570810|gb|EFC18847.1| glutamate racemase [Desulfovibrio sp. FW1012B]
Length = 268
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 54/255 (21%), Positives = 96/255 (37%), Gaps = 6/255 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL V + + +P +Y D PYG + + + + L
Sbjct: 8 PIGIFDSGVGGLTVARAVMDRLPHESIVYFGDTARVPYGVKSPDTVARYAAQI-TRFLLA 66
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L ++ACNT + + + P + A A T++ I I++TP+T+
Sbjct: 67 KDVKLLIVACNTMAAVALPAITALSPVPVIEVIDAGARSALAATRTKRIGIIATPSTIAS 126
Query: 135 TYTSNLIHS-YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + H + + VE + + E D
Sbjct: 127 RAYERALTTLGGPGVHTASRACPLFVPLVE----EGWLDHPATRLVAEEYLAPLLAYDLD 182
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++L CTHYPL+ + ++ + D++ ++A RA LL + Q HA ++
Sbjct: 183 TLILGCTHYPLLAPLLARVVGPGIRLQDSASAVAERAAALLAELGLGQADGRPGHAFHVT 242
Query: 254 GKPDIAMRRLMQGFG 268
P + G
Sbjct: 243 DMPLKFREIGERFLG 257
>gi|293189259|ref|ZP_06607982.1| glutamate racemase [Actinomyces odontolyticus F0309]
gi|292821722|gb|EFF80658.1| glutamate racemase [Actinomyces odontolyticus F0309]
Length = 276
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 55/265 (20%), Positives = 95/265 (35%), Gaps = 14/265 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I IFDSG+GGL V + + +P+ IY+ D PYG ++ + +
Sbjct: 2 NNAPIGIFDSGLGGLTVARAVIDKLPDEEIIYLGDTEHTPYGPRAIAQVRSLTLSALDE- 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTF----PSMAFLGAVPAIKQAAAYTQSGLISILS 127
L VIACNTA + R + PA +Q+ T++ + ++
Sbjct: 61 LASRGVKALVIACNTATAAALADARERYWIDAGIPVVEVITPAARQSVIATRNHHVGVIG 120
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT++ + + + + VE +EI+
Sbjct: 121 TKATIQSEAYLRALAAV-PGLTVSQQACPAFVDFVEAGVT----TGEEIEAVAREYLTPL 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT----R 243
+ D ++L CTHYPL+ V ++ V + +S++ A L
Sbjct: 176 KEAGVDTLILGCTHYPLLTGVIGRIMGERVTLVTSSEATANVTYNELVDRGLLHDPWPAG 235
Query: 244 VFDDHALFLSGKPDIAMRRLMQGFG 268
H +G D+ R + G
Sbjct: 236 DGPQHQFLATGASDLFPRLARRFLG 260
>gi|83312625|ref|YP_422889.1| glutamate racemase [Magnetospirillum magneticum AMB-1]
gi|82947466|dbj|BAE52330.1| Glutamate racemase [Magnetospirillum magneticum AMB-1]
Length = 284
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 60/254 (23%), Positives = 101/254 (39%), Gaps = 5/254 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ IFDSG+GGL V +R MP+ +Y+ D PYG + + + ++ L +
Sbjct: 21 PVGIFDSGVGGLTVAAAIRRAMPDERLLYLGDVARQPYGTKSPRTVTRYAVQ-AAEFLVE 79
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLR 133
V+ACNTA + + + FP + LG V A AA + G I + +T T R
Sbjct: 80 KGIKALVVACNTASAVALEAIAERFPGLPVLGVVEAGADGAARASARGRIVVAATEGTCR 139
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I + V + + EE I + + + F + D
Sbjct: 140 SEAYERAIARRRDGALVRCVPCPLFVALAEEGLTDGPIVDSVARHYLGSLFD--GTEPGD 197
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTH+PL+ +L+ V +D +++ + LL + L +
Sbjct: 198 CLVLGCTHFPLLAPALSRLAGPEVTLVDCAEATSSMLVRLLEGREAPK-GSGGGLHLIST 256
Query: 254 GKPDIAMRRLMQGF 267
P+ R + F
Sbjct: 257 DAPERFARMAGKLF 270
>gi|300869685|ref|YP_003784556.1| glutamate racemase [Brachyspira pilosicoli 95/1000]
gi|300687384|gb|ADK30055.1| glutamate racemase [Brachyspira pilosicoli 95/1000]
Length = 267
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 56/257 (21%), Positives = 104/257 (40%), Gaps = 11/257 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG GG+ VL+K+ ++P ++IY+ D+ PYG+ + + + + L
Sbjct: 5 SKPIAVFDSGFGGISVLKKLLNILPNENYIYLGDNHNIPYGDKSKEEITQLSIKILD-FL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K ++VIACNT D L+ + ++ T++ ISI++T T+
Sbjct: 64 IKQNCKMAVIACNTITASSYDVLKEKYNIPIIEIISNGVEDIIDNTKNNNISIMATEFTV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ I Y + + V+ L +E + +++ ++ +
Sbjct: 124 HSNMYHDKILDYNDKIKVTQVACQKLCPMIENNWYSYDDRILVLEEYVKK-----IDDNS 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD----WLDNSDSIARRARCLLPRINTHQTRVFDDH 248
D ++LACTHYP I+ + + +D S IA + L N T
Sbjct: 179 DTLLLACTHYPFIIDDIKSVVNRKKTNIKNIIDPSTKIALSIKKYLIDNNLLNTSG-GKL 237
Query: 249 ALFLSGKPDIAMRRLMQ 265
F +G + +
Sbjct: 238 KFFTTGDKKDFNDFVSR 254
>gi|258622814|ref|ZP_05717831.1| glutamate racemase [Vibrio mimicus VM573]
gi|258584875|gb|EEW09607.1| glutamate racemase [Vibrio mimicus VM573]
Length = 265
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 80/265 (30%), Positives = 136/265 (51%), Gaps = 15/265 (5%)
Query: 12 LQNS----ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ + +LIFDSG+GGL V +++ +P+ +IY+ D+ +PYG L R+ L
Sbjct: 1 MSSPSFPRVLIFDSGVGGLSVYREIEARLPQLSYIYLFDNAAYPYGELAQETLIARVDTL 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ ++++ + L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++
Sbjct: 61 VTRMVEQERIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLIA 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TPAT++R YT LI + + ++ L+ S L + EE G + +E++ +
Sbjct: 119 TPATVKRQYTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELENILHP----- 173
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
DV VL CTH+PLI +Q+ V +D+ +IARR + LL
Sbjct: 174 LKHAIDVAVLGCTHFPLIKEEIQQVLGEQVQLIDSGLAIARRVQELLGIDKG--EGENQK 231
Query: 248 HALFLSGKP--DIAMRRLMQGFGLK 270
H ++ S P + A+ ++ G
Sbjct: 232 HHIYASAPPWEESALNIKLKELGFN 256
>gi|254470122|ref|ZP_05083526.1| glutamate racemase [Pseudovibrio sp. JE062]
gi|211960433|gb|EEA95629.1| glutamate racemase [Pseudovibrio sp. JE062]
Length = 257
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 94/239 (39%), Positives = 144/239 (60%), Gaps = 4/239 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L+ DSG+GGL V ++++ +P+ +Y+AD FPYG+WE AL+ + L + + D +
Sbjct: 23 VLVLDSGVGGLSVQREIKRALPDAGLLYLADRAAFPYGDWEADALRDHIASLVNSVSDVW 82
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
QP V+ACNTA TL+ LR + +G VPAIK AA T+SG+ ++L+TP T++R
Sbjct: 83 QPSAVVVACNTASTLVLQRLREFL-DVPVVGTVPAIKPAAQKTKSGVFAVLATPGTVKRD 141
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT +LI + + HI LV + LA+ E+ + D ++ EI CF+EK G+RTD +
Sbjct: 142 YTQDLIIDFAPEHHIALVGATGLAALAEDKLASRAVDLDRLRHEIAPCFVEKSGERTDCV 201
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
VL CTHYP + Q++PWPV W+D + +IARR +L R + F++G
Sbjct: 202 VLGCTHYPFLQEEMEQVAPWPVTWIDPAPAIARRLTDVLERDHVAVGCED---LFFVTG 257
>gi|71280369|ref|YP_268000.1| glutamate racemase [Colwellia psychrerythraea 34H]
gi|71146109|gb|AAZ26582.1| glutamate racemase [Colwellia psychrerythraea 34H]
Length = 256
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 61/251 (24%), Positives = 106/251 (42%), Gaps = 7/251 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL + + + +P + IY+AD + PYG + KR+ + L
Sbjct: 1 MFDSGVGGLSIAKCITEQLPHENIIYIADSLHAPYGEKSVEFIIKRV-NYIAKQLIDKGV 59
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
VIACNTA ++LRS S+ +G PAIK AA + S ++IL+T AT
Sbjct: 60 KAIVIACNTATVNAIEQLRSQV-SIPIIGVEPAIKPAAKQSISKKVAILATQATSENQRF 118
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+LI + + +H+ L +E+ D+ ++ + D +VL
Sbjct: 119 KDLIDLHHNGAEVHIQPCPGLVEFIEQGNQN----SDDCNALLKQYINPLIKEGIDTLVL 174
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHALFLSGKP 256
CTHYP + ++ V ++ + + + L + + F S +
Sbjct: 175 GCTHYPFVQKQISLIAGQQVTIIETAAPVTVQLSKKLVEREISACKTQQGQYQFFSSLET 234
Query: 257 DIAMRRLMQGF 267
+ Q +
Sbjct: 235 KQQEQIFSQLW 245
>gi|317508768|ref|ZP_07966418.1| Asp/Glu/Hydantoin racemase [Segniliparus rugosus ATCC BAA-974]
gi|316252931|gb|EFV12351.1| Asp/Glu/Hydantoin racemase [Segniliparus rugosus ATCC BAA-974]
Length = 287
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 102/260 (39%), Gaps = 7/260 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K + I +FDSG+GGL V + + L+P YVAD PYG ++K + +
Sbjct: 5 KSEAPIGVFDSGVGGLTVARAIAELLPNEEMRYVADSAHQPYGPQSVAQVRKHALAVLD- 63
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L + + VIACN+A + R +P +PA++ A A T++G I ++ T
Sbjct: 64 SLVEEGVKMLVIACNSASVACLADARERYPVPVVEVVLPAVRSALAATRTGRIGVIGTRI 123
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + + I +E + ++ E
Sbjct: 124 TIASRAYEDSFAAVAPHTRIVSAPCPQFVDFIERGV----VSGPRLEALAREYLAPLEAA 179
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
DV+VL CTHYPL+ + ++ V + S+ A+ +L + +
Sbjct: 180 DVDVLVLGCTHYPLLAELIGEVMGPGVRLVSPSEETAKDVARILAAEGVSRPGAGAPAPV 239
Query: 251 FL--SGKPDIAMRRLMQGFG 268
+ +G+ D + G
Sbjct: 240 LVTQTGQSDRLFQWAGDLLG 259
>gi|256847951|ref|ZP_05553395.1| glutamate racemase [Lactobacillus coleohominis 101-4-CHN]
gi|256715011|gb|EEU29988.1| glutamate racemase [Lactobacillus coleohominis 101-4-CHN]
Length = 267
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 54/256 (21%), Positives = 100/256 (39%), Gaps = 7/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I + DSG+GGL V++ +R +P ++V D FPYG + + + + L
Sbjct: 3 NRPIGVMDSGLGGLSVIRIIREQLPNESIVFVGDQGHFPYGVRTQENVCQLALNI-GRYL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Y + +IACNTA L+ P P + A A + I + +T T+
Sbjct: 62 MTYDIKMMIIACNTATAASLPTLQKELPIPVIGVIKPGAEAALAQPKHARIGVTATEGTI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IH + ++ + S VE G ++ + +++ + +
Sbjct: 122 KAGAYPKTIHELNPDVTVIPKAAQPMVSVVEHNEVGTPKAQEVVNEQLAI----FKKQPV 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-ALF 251
DV+VL CTH+P + L P V +D + + A+ +L + + L+
Sbjct: 178 DVLVLGCTHFPFLAKEISNLLP-DVKLVDPALETVKTAKQMLTEADQLTSSDQPGTMKLY 236
Query: 252 LSGKPDIAMRRLMQGF 267
+G +
Sbjct: 237 STGDFQELQTGAEKWL 252
>gi|329964674|ref|ZP_08301728.1| glutamate racemase [Bacteroides fluxus YIT 12057]
gi|328525074|gb|EGF52126.1| glutamate racemase [Bacteroides fluxus YIT 12057]
Length = 281
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 59/261 (22%), Positives = 106/261 (40%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L K+R +PEY +IY+ D+ PYG + + + + L +
Sbjct: 11 PIGVFDSGYGGLTILSKIRETLPEYDYIYLGDNARTPYGTRSFEIVYEFTLQAVTK-LFE 69
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ACNTA + ++L P LG + P ++ TQS I +L+T
Sbjct: 70 MGCHLVILACNTASAKALRSIQINDLPRLDPMRRVLGVIRPTVECIGNITQSRHIGVLAT 129
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ +H + + + VE + I+K I+ +
Sbjct: 130 AGTIKSQSYPLEVHKLFPDIKVSGEACPLWVPLVENNEARGDGTDYFIRKYIDELLA--K 187
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFD 246
+ D ++L CTHYP+++ RQ P + + + +A+ + L R +
Sbjct: 188 DNQIDTVILGCTHYPILLPKIRQYMPSGITTVAQGEFVAKSLKDYLQRHPEMDKKCTKGG 247
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ D +
Sbjct: 248 RCVYRTTEAEDKFIESASTFL 268
>gi|295132492|ref|YP_003583168.1| glutamate racemase [Zunongwangia profunda SM-A87]
gi|294980507|gb|ADF50972.1| glutamate racemase [Zunongwangia profunda SM-A87]
Length = 263
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 67/256 (26%), Positives = 118/256 (46%), Gaps = 8/256 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+NSI IFDSGIGG + +++ L+P +Y+AD PYG + +
Sbjct: 2 NKNSIGIFDSGIGGTSIWREIHELLPFEDTVYLADSFNAPYGIKTREEIIELSRKNTIK- 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + + V+ACNTA T +ELR+ F ++F+G PAIK AA +++ I IL+T T
Sbjct: 61 LLELGAKIIVVACNTATTNAINELRNEF-DVSFIGIEPAIKPAALQSRTKNIGILATKGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L + + Y + V L +E KI E+ ++ +
Sbjct: 120 LSSSLFTKTSDLYTQGLKVIEVEGNGLVELIE----AGKIYSTEMDLLLDQLLAPLISQP 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHA 249
D +VL C+HYP ++ ++ + +D+ +++AR+ + +L + N T +
Sbjct: 176 IDYLVLGCSHYPYLIPRLKEKFHPALSIIDSGEAVARQTKAILEKENLLNTDFQQKGTCT 235
Query: 250 LFLSGKPDIAMRRLMQ 265
+ + P I + +
Sbjct: 236 FYTNYDPYILKNIIKR 251
>gi|257467248|ref|ZP_05631559.1| glutamate racemase [Fusobacterium gonidiaformans ATCC 25563]
gi|315918376|ref|ZP_07914616.1| glutamate racemase [Fusobacterium gonidiaformans ATCC 25563]
gi|313692251|gb|EFS29086.1| glutamate racemase [Fusobacterium gonidiaformans ATCC 25563]
Length = 261
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 65/242 (26%), Positives = 109/242 (45%), Gaps = 6/242 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSGIGGL VL + ++P+ +FIY AD PYG + K L K
Sbjct: 2 KIGVFDSGIGGLSVLHQAMQMLPQENFIYYADVDHVPYGTKTKEEIIKYTSEAVD-FLVK 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
VIACNTA + ELR + S+ +G PA+K+A + + +++TP T++
Sbjct: 61 EGVKAIVIACNTATSAAIQELRERY-SLPIIGMEPAVKKAIDFHPEKRVLVIATPMTVQG 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
NLI ++ + ++ L + E +++ I ++ F + +
Sbjct: 120 EKLHNLIEKVDTEHLVDAIALPKLVTFAE----EEIFEDEVISAYLQEEFKQLNLEDYSS 175
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
IVL CTH+ ++L P V +LD ++ ++ L IN + + SG
Sbjct: 176 IVLGCTHFNYFKESLKKLLPKGVKFLDGNEGTIKKLISELENINALEKNEKRKIEYYYSG 235
Query: 255 KP 256
+
Sbjct: 236 RK 237
>gi|296393941|ref|YP_003658825.1| glutamate racemase [Segniliparus rotundus DSM 44985]
gi|296181088|gb|ADG97994.1| glutamate racemase [Segniliparus rotundus DSM 44985]
Length = 274
Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats.
Identities = 58/256 (22%), Positives = 103/256 (40%), Gaps = 7/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL V + + L+P YVAD PYG +++ + + L
Sbjct: 7 EAPIGVFDSGVGGLTVARAVADLLPHEAMRYVADSAHQPYGPQSVAQVRRHALAVLD-SL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACN+A + R +P +PA++ A A T+SG I ++ T T+
Sbjct: 66 VDEGVKMLVIACNSASVACLADARERYPVPVVEVVLPAVRSALAATRSGRIGVIGTRITI 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + +E+ + E++
Sbjct: 126 ASRAYEDSFAAVAPHTSVVSAPCPRFVDFIEQGV----VSGPELEALALEYLAPLTAADV 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
DV+VL CTHYPL+ + + V + S+ A+ +L T + ++ +
Sbjct: 182 DVLVLGCTHYPLLADLIGAVMGPDVRLVSPSEETAKDIARILAAEGTARPAAQGPASVLV 241
Query: 253 SGKPDIAMRRLMQGFG 268
+ A +L+Q G
Sbjct: 242 TQ--TGASEQLLQWAG 255
>gi|160888040|ref|ZP_02069043.1| hypothetical protein BACUNI_00448 [Bacteroides uniformis ATCC 8492]
gi|156862539|gb|EDO55970.1| hypothetical protein BACUNI_00448 [Bacteroides uniformis ATCC 8492]
Length = 279
Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats.
Identities = 57/261 (21%), Positives = 105/261 (40%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG GGL +L K+R +P+Y +IY+ D+ PYG + + + + L +
Sbjct: 11 PIGIFDSGYGGLTILSKIREALPQYDYIYLGDNARAPYGTRSFEIVYEFTLQAVTK-LFE 69
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ACNTA + ++L P LG + P ++ TQS + +L+T
Sbjct: 70 MGCHLVILACNTASAKALRNIQMNDLPRLDPMRRVLGVIRPTVECIGNITQSRHVGVLAT 129
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ +H + + + S VE + + I+K I +
Sbjct: 130 AGTIKSESYPLEVHKLFPDIKVSGEACPLWVSLVENNEAQGEGTDYFIRKNIGNLLA--K 187
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFD 246
+ D ++L CTH+PL++ +Q P + + + +A + L R +
Sbjct: 188 DTQIDTVILGCTHFPLLLPKIQQYMPDGITTVTQGELVADSLKDYLHRHPEMDKKCTKGG 247
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ +
Sbjct: 248 RCVYRTTESEEKFTESASTFL 268
>gi|317478578|ref|ZP_07937735.1| Asp/Glu/Hydantoin racemase [Bacteroides sp. 4_1_36]
gi|316905219|gb|EFV27016.1| Asp/Glu/Hydantoin racemase [Bacteroides sp. 4_1_36]
Length = 279
Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats.
Identities = 57/261 (21%), Positives = 105/261 (40%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG GGL +L K+R +P+Y +IY+ D+ PYG + + + + L +
Sbjct: 11 PIGIFDSGYGGLTILSKIREALPQYDYIYLGDNARAPYGTRSFEIVYEFTLQAVTK-LFE 69
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ACNTA + ++L P LG + P ++ TQS + +L+T
Sbjct: 70 MGCHLVILACNTASAKALRNIQMNDLPRLDPMRRVLGVIRPTVECIGNITQSRHVGVLAT 129
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ +H + + + S VE + + I+K I +
Sbjct: 130 AGTIKSESYPLEVHKLFPDIKVSGEACPLWVSLVENNEAQGEGTDYFIRKNIGNLLA--K 187
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFD 246
+ D ++L CTH+PL++ +Q P + + + +A + L R +
Sbjct: 188 DTQIDTVILGCTHFPLLLPKIQQYMPDGITTVTQGELVADSLKDYLHRHPEMDRKCTKGG 247
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ +
Sbjct: 248 RCVYRTTESEEKFTESASTFL 268
>gi|85715176|ref|ZP_01046160.1| glutamate racemase [Nitrobacter sp. Nb-311A]
gi|85698091|gb|EAQ35964.1| glutamate racemase [Nitrobacter sp. Nb-311A]
Length = 280
Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats.
Identities = 98/262 (37%), Positives = 145/262 (55%), Gaps = 5/262 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+IL+ DSG+GGL VL+K+ +P ++YVADD FPYG + + R++ L
Sbjct: 1 MSNTPTILVVDSGLGGLTVLRKIVDALPAARYVYVADDAFFPYGRLSEEEIIARVVPLVG 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+++ + P + VIACNT + LR+ + S+ F+G VPAIK A A +++ +S+L T
Sbjct: 61 ELIGAHAPDIVVIACNTMSVSVLGPLRAAY-SIPFVGTVPAIKPACAASKTKRVSVLGTR 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT++R YT LI + C + LV + LAS E+ G + + +I EI CF+
Sbjct: 120 ATVQREYTQALIRDHAQACTVTLVGAASLASLAEDALRGKTVSDADILSEIAPCFVSAVD 179
Query: 190 K---RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
RTD +VLACTHYPL++ +L+PWPV W+D + +IARR LL R
Sbjct: 180 GGDLRTDAVVLACTHYPLLLDRLLKLAPWPVSWIDPAPAIARRVVDLLGSG-GGGDREAP 238
Query: 247 DHALFLSGKPDIAMRRLMQGFG 268
+F SG+P L FG
Sbjct: 239 PEMIFTSGRPHGLTDALAPFFG 260
>gi|323142469|ref|ZP_08077289.1| glutamate racemase [Phascolarctobacterium sp. YIT 12067]
gi|322413046|gb|EFY03945.1| glutamate racemase [Phascolarctobacterium sp. YIT 12067]
Length = 267
Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats.
Identities = 61/257 (23%), Positives = 102/257 (39%), Gaps = 7/257 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K+Q I + DSG+GGL VL+ + ++P FIYV D PYG + ++ + +
Sbjct: 3 KMQ-PIGVLDSGVGGLSVLKCLHQMLPYEDFIYVGDTARTPYGTRSEQEIRGFVGEIID- 60
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L VIACNT L D LR T P +G +Q A + + I +L+T
Sbjct: 61 WLAAKNVKQVVIACNTLTMLGVDSLRGTHP-FGVVGMSKGAQQLLAASPNKKIGVLATQF 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ I + +Q ++ V+ +E G + E+++ I +
Sbjct: 120 TIASGLHKKAILAADAQAQVYPVACPKFVPLIE----GERFDSPELQQAIAEYTEPFKKA 175
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
+ ++L+CTHYP I V LD + + + A L +T +
Sbjct: 176 GVEAVILSCTHYPFIKEQIEADLGPNVKVLDPAAATSADAIAALKEEGLLRTEGKGRLQV 235
Query: 251 FLSGKPDIAMRRLMQGF 267
+ R +
Sbjct: 236 CCTADLARVERLAGRML 252
>gi|158321093|ref|YP_001513600.1| glutamate racemase [Alkaliphilus oremlandii OhILAs]
gi|158141292|gb|ABW19604.1| glutamate racemase [Alkaliphilus oremlandii OhILAs]
Length = 274
Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats.
Identities = 63/263 (23%), Positives = 103/263 (39%), Gaps = 9/263 (3%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
E I +FDSG+GG+ VL + +P +IY D PYG +KK +
Sbjct: 2 IENSASLPIGVFDSGVGGISVLADLIHQLPNEQYIYFGDSGNAPYGVRSKEEVKKLSFNV 61
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
L + V+ACNTA +++ +ELR + +G PA+K A G I +++
Sbjct: 62 VDK-LLNFNIKAVVVACNTATSIVIEELRKRL-DIPVIGMEPALKPAIELNNFGKIVVMA 119
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TP TLR ++LI + + L +E+ + EI+ I +
Sbjct: 120 TPVTLREKKFNDLIMKLTDTDRVVKMPCPGLVEIIEQQ----GDHDAEIEAYIRRIYASY 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR---V 244
+ +VL CTHY I + ++ +D + AR + LL + T
Sbjct: 176 QLDTVGTVVLGCTHYVFIKDMIAKVVGPEATVIDGNFGTARHVKELLKQSEALNTDGTYS 235
Query: 245 FDDHALFLSGKPDIAMRRLMQGF 267
+ S K +
Sbjct: 236 QTSVRIMNSSKDASMIALSQSLL 258
>gi|150010273|ref|YP_001305016.1| glutamate racemase [Parabacteroides distasonis ATCC 8503]
gi|301308360|ref|ZP_07214314.1| glutamate racemase [Bacteroides sp. 20_3]
gi|149938697|gb|ABR45394.1| glutamate racemase [Parabacteroides distasonis ATCC 8503]
gi|300833830|gb|EFK64446.1| glutamate racemase [Bacteroides sp. 20_3]
Length = 276
Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats.
Identities = 55/261 (21%), Positives = 98/261 (37%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL + K+ LMP Y ++Y+ D+ PYG + + S L +
Sbjct: 8 PIGLFDSGYGGLTIFDKIHQLMPGYDYVYLGDNARSPYGTRSFEVVYQFTRQAVSR-LFE 66
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ACNTA + + +L + P+ LG + P ++ +++ I I+ T
Sbjct: 67 SGCQLVILACNTASAKALRTIQQKDLPTWDPNRRVLGVIRPTVELVDTISRTKHIGIVGT 126
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+ + I + + + VE + +KK I+
Sbjct: 127 SGTITSNSYTIEIGRMYPHIQVTGEACPMWVPLVENNEFNSPGADYFVKKHIDHLLS--V 184
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFD 246
+ D ++L CTHYPL++ R P + + +A R L R +
Sbjct: 185 DPQIDTLILGCTHYPLLMDKIRAFLPSGITLFSQGEHVAESLRDYLGRHPEMDRKLTKGG 244
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ +
Sbjct: 245 SCRFLTTESAEKFSEAASIFM 265
>gi|34762406|ref|ZP_00143407.1| Glutamate racemase [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
gi|237742084|ref|ZP_04572565.1| glutamate racemase [Fusobacterium sp. 4_1_13]
gi|256845420|ref|ZP_05550878.1| glutamate racemase [Fusobacterium sp. 3_1_36A2]
gi|294785284|ref|ZP_06750572.1| glutamate racemase [Fusobacterium sp. 3_1_27]
gi|27887931|gb|EAA24998.1| Glutamate racemase [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
gi|229429732|gb|EEO39944.1| glutamate racemase [Fusobacterium sp. 4_1_13]
gi|256718979|gb|EEU32534.1| glutamate racemase [Fusobacterium sp. 3_1_36A2]
gi|294486998|gb|EFG34360.1| glutamate racemase [Fusobacterium sp. 3_1_27]
Length = 264
Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats.
Identities = 65/257 (25%), Positives = 108/257 (42%), Gaps = 10/257 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFSDIL 72
I IFDSG+GG VL++M +P +IY D+ FPYG+ + L+K + +
Sbjct: 6 QKIGIFDSGLGGTTVLKEMIKSLPNEDYIYYGDNGNFPYGSGKTKNELQKLTERILDFFV 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
L ++ACNTA T D LR F +K A+ T++ I+++ST T
Sbjct: 66 KN-NCKLVIVACNTASTAAIDYLREKFSLPIIGIVEAGVKIASKNTKNKNIAVISTKFTA 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
N S+ ++ ++ + A +E +++ + K + K T
Sbjct: 125 DSHGYKNKAKMLDSELNVKEIACIEFAQMIESGWDTFDNRKELLNKYLSE-----IPKNT 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHALF 251
D +VL CTHYPLI + + +D + I RA L +N + F
Sbjct: 180 DTLVLGCTHYPLIRKDIEKNI--KIKVVDPAVEIVERATQTLSSLNLLNDKKEKGRIIFF 237
Query: 252 LSGKPDIAMRRLMQGFG 268
++G+ + G
Sbjct: 238 VTGETYHFKPTAEKFLG 254
>gi|19704496|ref|NP_604058.1| glutamate racemase [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
gi|296328142|ref|ZP_06870673.1| glutamate racemase [Fusobacterium nucleatum subsp. nucleatum ATCC
23726]
gi|22001821|sp|Q8REE6|MURI_FUSNN RecName: Full=Glutamate racemase
gi|19714772|gb|AAL95357.1| Glutamate racemase [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
gi|296154654|gb|EFG95440.1| glutamate racemase [Fusobacterium nucleatum subsp. nucleatum ATCC
23726]
Length = 264
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 62/257 (24%), Positives = 106/257 (41%), Gaps = 10/257 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFSDIL 72
I IFDSG+GG VL+++ +P +IY D+ FPYG+ + L+K + +
Sbjct: 6 QRIGIFDSGLGGTTVLKELINSLPNEDYIYYGDNGNFPYGSGKTKNELQKLTERILDFFV 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
L ++ACNTA T D LR F +K A+ T++ I+++ST T
Sbjct: 66 KN-NCKLVIVACNTASTAAIDYLREKFSLPIIGIIEAGVKIASKNTKNKNIAVISTKFTA 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
N S+ ++ ++ + A +E +++ + K + K
Sbjct: 125 ESHGYKNKAKMLDSELNVKEIACIEFAQMIETGWDTFDNRKELLNKYLSE-----IPKNA 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALF 251
D +VL CTHYPLI + + +D + I R L +N + F
Sbjct: 180 DTLVLGCTHYPLIREDIEKNI--KIKVVDPAVEIVERTIQTLTSLNLLNDKKERGRIIFF 237
Query: 252 LSGKPDIAMRRLMQGFG 268
++G+ + G
Sbjct: 238 VTGETYHFKPTAEKFLG 254
>gi|270295594|ref|ZP_06201795.1| glutamate racemase [Bacteroides sp. D20]
gi|270274841|gb|EFA20702.1| glutamate racemase [Bacteroides sp. D20]
Length = 279
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 57/261 (21%), Positives = 106/261 (40%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG GGL +L K+R ++P+Y +IY+ D+ PYG + + + + L +
Sbjct: 11 PIGIFDSGYGGLTILSKIREVLPQYDYIYLGDNARAPYGTRSFEIVYEFTLQAVTK-LFE 69
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ACNTA + ++L P LG + P ++ TQS + +L+T
Sbjct: 70 MGCHLVILACNTASAKALRNIQMNDLPRLDPMRRVLGVIRPTVECIGNITQSRHVGVLAT 129
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ +H + + + S VE + + I+K I +
Sbjct: 130 AGTIKSESYPLEVHKLFPDIKVSGEACPLWVSLVENNEAQGEGTDYFIRKNIGNLLA--K 187
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFD 246
+ D ++L CTH+PL++ +Q P + + + +A + L R +
Sbjct: 188 DTQIDTVILGCTHFPLLLPKIQQYMPDGITTVTQGELVADSLKDYLHRHPEMDKKCTKGG 247
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ +
Sbjct: 248 RCVYRTTESEEKFTESASTFL 268
>gi|104773633|ref|YP_618613.1| glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus
ATCC 11842]
gi|103422714|emb|CAI97341.1| Glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus
ATCC 11842]
Length = 261
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 60/245 (24%), Positives = 101/245 (41%), Gaps = 6/245 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I +FDSG GGL VL ++ LMP +++ D PYG + + + ++
Sbjct: 6 VDRPIGVFDSGQGGLTVLSRLVDLMPNEDYVFYGDSANAPYGVKSKEEVYQLAKRVVDEL 65
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+DK+Q +IACNTA + D LR + S+ +G PA+K AA + ++TP T
Sbjct: 66 IDKHQVKAVMIACNTATSAAADRLRREY-SLPIIGIEPAVKPAAEENPGRQVVAMATPLT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L + + L+ + V + L +E+ I + +E GK
Sbjct: 125 LEQDKFNQLVAECAEPGQVVKVPAPKLVELIEKGQT----DSPAIYQYLEELLAPYVGKA 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
+VL CTH+P +++ D + A + L + LF
Sbjct: 181 A-GVVLGCTHFPFAKQAIQEILGPQAKVYDGAIGAAAEVKRQLASQDELNASSQPGQILF 239
Query: 252 LSGKP 256
+ P
Sbjct: 240 ENSAP 244
>gi|312885977|ref|ZP_07745605.1| glutamate racemase [Mucilaginibacter paludis DSM 18603]
gi|311301514|gb|EFQ78555.1| glutamate racemase [Mucilaginibacter paludis DSM 18603]
Length = 276
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 56/240 (23%), Positives = 107/240 (44%), Gaps = 9/240 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I +FDSG GGL V + + L+P+Y +IY+ D+ PYG+ + + L
Sbjct: 5 HPIGVFDSGYGGLTVFRSIAKLLPQYDYIYLGDNSRAPYGSRSFKTIHQYTWECV-QHLF 63
Query: 74 KYQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
K L ++ACNTA + + +L+ S LG + P + Y+++ I +L
Sbjct: 64 KMGCPLVILACNTASAKALRTIQQHDLKKHDSSKRVLGVIRPTAEVIGNYSKTKEIGVLG 123
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++ I ++ +++ + + +E + +K+ ++ +
Sbjct: 124 TKGTVQSGSYQIEIGNFFPDVNVYQQACPLWVPLIENGEYDKPGADYFVKQYLDQILAQ- 182
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
R D ++LACTHYPL+ R P V + D +A+ L R ++++ +
Sbjct: 183 -SPRIDTLLLACTHYPLLEQKIRAYLPADVQAVSQGDIVAQSLVNYLQRHPEMESKLTKN 241
>gi|124515180|gb|EAY56691.1| Glutamate racemase [Leptospirillum rubarum]
Length = 314
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 7/255 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ P+ F Y+ D FPYG + + + +
Sbjct: 12 IALFDSGVGGLTVLRHFWETFPDRDFAYLGDMARFPYGTKSRETILRFARENVLFLRTLH 71
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRR 134
P L V AC T + + EL FP + +G + A + A T++G + +L+T T+
Sbjct: 72 -PSLIVAACFTVSSQVLPELSREFPDVPIVGMLEAGARAACRLTRTGSVGVLATEGTISS 130
Query: 135 TYTSNLI-HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+I ++ + + A VEE I E +K +E D
Sbjct: 131 QAYPAVIGEMTAHSVRVYGQACPLFAPMVEEGVTEGPIAELVARKYLEPFLNVYRE--VD 188
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
I+L CTHYP + + P + ++D +A + + N + +++
Sbjct: 189 TIILGCTHYPPLRRTLEAILP-DIVFVDPGQELAEELKKA-GKTNGSSGNPLPERHFYVT 246
Query: 254 GKPDIAMRRLMQGFG 268
P+ +R G
Sbjct: 247 DSPERFVRIGENLLG 261
>gi|304312822|ref|YP_003812420.1| Glutamate racemase [gamma proteobacterium HdN1]
gi|301798555|emb|CBL46785.1| Glutamate racemase [gamma proteobacterium HdN1]
Length = 276
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 87/257 (33%), Positives = 127/257 (49%), Gaps = 8/257 (3%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSGIGGL V +++R MP YVAD+ FPYG ++ L +R+ L + +Y P
Sbjct: 13 LFDSGIGGLSVAREIRAAMPGLDINYVADNRIFPYGLQKESVLIERVCALMPILEARYSP 72
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
VIACN+A T++ D LR T + +G VPAIK AAA +Q +I +L+TP T++R+YT
Sbjct: 73 GAIVIACNSASTVVLDALR-TQTQVPVIGVVPAIKPAAAQSQRRVIGLLATPGTIQRSYT 131
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
LI + + C + LV S L S E GI I E+ + D++VL
Sbjct: 132 RRLIDQFANDCTVLLVGSSALVSLAENKLRGIPIDLQEVSNIVAPFCHA--ETPPDIVVL 189
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-----DDHALFL 252
CTH+P + Q+ P +D+ ++IARR R +L F
Sbjct: 190 GCTHFPFLREELMQVLPENTRLIDSGEAIARRTRHILEAQGLEAQGAAFLERVPTLHFFF 249
Query: 253 SGKPDIAMRRLMQGFGL 269
+ + D A L
Sbjct: 250 TEETDSAHELAPALLSL 266
>gi|303229117|ref|ZP_07315918.1| glutamate racemase [Veillonella atypica ACS-134-V-Col7a]
gi|302516130|gb|EFL58071.1| glutamate racemase [Veillonella atypica ACS-134-V-Col7a]
Length = 269
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 60/254 (23%), Positives = 108/254 (42%), Gaps = 7/254 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GGL VL+ ++ P +FIY+ D+ P GN + + + L +
Sbjct: 10 PIGVFDSGVGGLSVLKVLQEQFPNENFIYIGDNANNPVGNRPTEEITEIACRIAE-TLHQ 68
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L VIACNT + DE+RS ++ +G +K A + S I I++T AT+
Sbjct: 69 VPVKLMVIACNTFTVVALDEVRSRV-NVPVIGVSQGVKTAIRESNSNTIGIMATVATVNS 127
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + + LA +E+ + +D ++K + + DV
Sbjct: 128 HIHKYVAMDIDHEVFVWEQPCPELAGLIEQ----GHLHDDAVRKAAKEYLAPMLERDIDV 183
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHALFLS 253
+VL CTH+P + V ++LS + ++D + + R + + H L+ +
Sbjct: 184 VVLGCTHFPFVSPVLQELSGDRIRYIDPAYETSDLVRRTMDSNHLHNPSTEKGRSTLYFT 243
Query: 254 GKPDIAMRRLMQGF 267
+ Q
Sbjct: 244 KDIALGADLGAQFL 257
>gi|154247770|ref|YP_001418728.1| glutamate racemase [Xanthobacter autotrophicus Py2]
gi|154161855|gb|ABS69071.1| glutamate racemase [Xanthobacter autotrophicus Py2]
Length = 305
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 100/252 (39%), Positives = 146/252 (57%), Gaps = 1/252 (0%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+IL+FDSG+GGL V +++ + P+ HFIY ADD FPYG D L R+ + + ++
Sbjct: 32 PTILVFDSGLGGLSVFREVARVRPDAHFIYAADDAAFPYGALADDTLVDRINRVVNRLIG 91
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ +P L VIACNTA TL LR+ P++ F+G VPAIK A +++ +S+L+TP T+R
Sbjct: 92 EVRPDLVVIACNTASTLALPSLRAAHPTLPFIGTVPAIKPACIASRTKRVSVLATPGTVR 151
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT+ L+ + S C + LV S LA E G + + +I EI CF+ G+RTD
Sbjct: 152 RDYTAALVREFASGCDVALVPSDRLAGLAEAAMAGDPVDDCDIVAEIAPCFVNSGGRRTD 211
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQTRVFDDHALFL 252
+VLACTHYPLI+ +L+PWPV ++D + +IARR L+ L
Sbjct: 212 TVVLACTHYPLILDRLTRLAPWPVTFIDPAPAIARRVTQLIGTAAPGTANEDPPPVRLVS 271
Query: 253 SGKPDIAMRRLM 264
+ +P A R
Sbjct: 272 TLRPMEATRISA 283
>gi|237744604|ref|ZP_04575085.1| glutamate racemase [Fusobacterium sp. 7_1]
gi|256027373|ref|ZP_05441207.1| glutamate racemase [Fusobacterium sp. D11]
gi|260494464|ref|ZP_05814594.1| glutamate racemase [Fusobacterium sp. 3_1_33]
gi|289765339|ref|ZP_06524717.1| glutamate racemase [Fusobacterium sp. D11]
gi|229431833|gb|EEO42045.1| glutamate racemase [Fusobacterium sp. 7_1]
gi|260197626|gb|EEW95143.1| glutamate racemase [Fusobacterium sp. 3_1_33]
gi|289716894|gb|EFD80906.1| glutamate racemase [Fusobacterium sp. D11]
Length = 264
Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats.
Identities = 65/257 (25%), Positives = 108/257 (42%), Gaps = 10/257 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFSDIL 72
I IFDSG+GG VL++M +P +IY D+ FPYG+ + L+K + +
Sbjct: 6 QRIGIFDSGLGGTTVLKEMIKSLPNEDYIYYGDNGNFPYGSGKTKNELQKLTERILDFFV 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
L ++ACNTA T D LR F +K A+ T++ I+++ST T
Sbjct: 66 KN-NCKLVIVACNTASTAAIDYLREKFSLPIIGIVEAGVKIASKNTKNKNIAVISTKFTA 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
N S+ ++ ++ + A +E +++ + K + K T
Sbjct: 125 ESHGYKNKAKMLDSELNVKEIACIEFAQMIESGWDTFDNRKELLNKYLSE-----IPKNT 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHALF 251
D +VL CTHYPLI + + +D + I RA L +N + F
Sbjct: 180 DTLVLGCTHYPLIRKDIEK--NTKIKVVDPAVEIVERATQTLTSLNLLNDKKEKGRIIFF 237
Query: 252 LSGKPDIAMRRLMQGFG 268
++G+ + G
Sbjct: 238 VTGETYHFKPTAEKFLG 254
>gi|304384311|ref|ZP_07366722.1| glutamate racemase [Prevotella marshii DSM 16973]
gi|304334627|gb|EFM00909.1| glutamate racemase [Prevotella marshii DSM 16973]
Length = 278
Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats.
Identities = 61/261 (23%), Positives = 107/261 (40%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I +FDSG GGL +L ++R +P Y +IY+ D+ PYG+ + + L
Sbjct: 9 AIGVFDSGYGGLTILHEIRQQLPMYDYIYIGDNARAPYGSRSFDVVYEFTRQAVMK-LFA 67
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ACNTA + + +L +T+PS LG + P + T + + I++T
Sbjct: 68 QGCRLVILACNTASAKALRTIQQHDLPTTYPSRRVLGVIRPTAEVIGDITTTRHVGIVAT 127
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
P T++ I + + + A+ VE K + +KK ++ +
Sbjct: 128 PGTIKSRSYEMEIGKLYPDIIVTGQACPLWAAIVEANEADSKGADYFVKKRLDELMS--K 185
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFD 246
D ++L CTHYPL++ R+ P V + +AR L R +R
Sbjct: 186 DPHIDSLILGCTHYPLLLSKIRKHLPASVHIIPQGCYVARSLDDYLHRHPEIASRCTQGG 245
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ P+
Sbjct: 246 TCRYLTTESPERFQETARMFL 266
>gi|313159357|gb|EFR58721.1| glutamate racemase [Alistipes sp. HGB5]
Length = 257
Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats.
Identities = 61/241 (25%), Positives = 102/241 (42%), Gaps = 7/241 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I ++DSG+GGL V +++R ++P +Y+ D PYG+ +++ +
Sbjct: 2 NDAPIGVYDSGLGGLTVWREVRRMLPSESLVYLGDGKNCPYGSRPREEVRRLADEAVA-S 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + V+ACNTA D LR + M +G PA+K A T+SG++ +L+T +
Sbjct: 61 LVAQGCKMVVVACNTATAAAIDFLREKYAPMPIVGMEPAVKPACLNTRSGVVGVLATERS 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L Y S + VE E ++ +
Sbjct: 121 LDGELFRRTAAKYGSGVELITAPGRGFVELVESDRESTPEAEQAVRDAVAVML----EHG 176
Query: 192 TDVIVLACTHYPLIVHVFRQ-LSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHA 249
D IVL CTHYP ++ V + ++ V+ +D S ++ARR LL + H +
Sbjct: 177 ADQIVLGCTHYPFLLPVLERVVAGRGVEIVDPSPAVARRVVQLLDQYGLHAAPDHVPSYT 236
Query: 250 L 250
Sbjct: 237 F 237
>gi|262163706|ref|ZP_06031447.1| glutamate racemase [Vibrio mimicus VM223]
gi|262027922|gb|EEY46586.1| glutamate racemase [Vibrio mimicus VM223]
Length = 265
Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats.
Identities = 81/265 (30%), Positives = 136/265 (51%), Gaps = 15/265 (5%)
Query: 12 LQNS----ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ + +LIFDSG+GGL V Q++ +P+ +IY+ D+ +PYG L R+ L
Sbjct: 1 MSSPSFPRVLIFDSGVGGLSVYQEIEARLPQLSYIYLFDNAAYPYGELAQETLIARVNTL 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ ++++ + L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++
Sbjct: 61 VTRMVEQERIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLIA 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TPAT++R YT LI + + ++ L+ S L + EE G + +E++ +
Sbjct: 119 TPATVKRQYTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELESILHP----- 173
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
DV VL CTH+PLI +Q+ V +D+ +IARR + LL
Sbjct: 174 LKHTIDVAVLGCTHFPLIKEEIQQVLGEQVQLIDSGLAIARRVQELLGIDKG--EGENQK 231
Query: 248 HALFLSGKP--DIAMRRLMQGFGLK 270
H ++ S P + A+ ++ G
Sbjct: 232 HHIYASAPPWEESALNIKLKELGFN 256
>gi|283456482|ref|YP_003361046.1| glutamate racemase [Bifidobacterium dentium Bd1]
gi|283103116|gb|ADB10222.1| MurI Glutamate racemase [Bifidobacterium dentium Bd1]
Length = 258
Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats.
Identities = 60/261 (22%), Positives = 96/261 (36%), Gaps = 8/261 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I +FDSG+GG+ V +++R MP +Y D PYG ++ +
Sbjct: 1 MTSTAPIGVFDSGLGGISVAREIRKGMPNEQVLYFGDSANAPYGTKTPKQVRDLSFAIVE 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--S 127
+ + VIACNTA + D LR + + +G PA+K A Q ++ +
Sbjct: 61 RFV-QQGAKAIVIACNTATSAAADALRDAY-DVPIIGMEPALKLACERGQGQRQRVIVAA 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TP TLR + L+ + S I L VE+ D + + + F
Sbjct: 119 TPLTLRERKFAVLMDRFKSDHTIFPQPCPGLVEIVEQGRLD---DHDLVMRTLHDYFDRY 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-D 246
+ D +VL CTH+ FR+L P +D + R +L +
Sbjct: 176 DLSTIDSVVLGCTHFVFYRDYFRELLPDSAAIIDGNQGTVRHLSVVLESLGKLAPDQAVG 235
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
L S +
Sbjct: 236 GIELANSDTSERIAELAEALL 256
>gi|284009189|emb|CBA76250.1| glutamate racemase [Arsenophonus nasoniae]
Length = 279
Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats.
Identities = 79/249 (31%), Positives = 128/249 (51%), Gaps = 3/249 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K + +ILIFDSG+GGL V +++R L+P+ H+IY D+ FPYG + +R++
Sbjct: 14 KTARPTILIFDSGVGGLSVYREVRQLLPDLHYIYAFDNDAFPYGEKSAEFIIERIIRFID 73
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
I K+ +++IACNTA T+ LR+ F +G VPAIK A T++G+I +L+T
Sbjct: 74 QIQQKHALAIAIIACNTASTVSLPILRAHF-QFPIIGVVPAIKPATKLTRNGIIGLLATK 132
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ YT LI + C + +++S L E+ G I + + + ++ KE
Sbjct: 133 ATVSGNYTRELIDRFAVDCKVEMIASSELVELAEKKLHGQIISTETLVRIVKPWLKMKEP 192
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D IVL CTH+PL+ +++ +D+ +IARRA L+ + A
Sbjct: 193 P--DTIVLGCTHFPLLSAELKEVLFDGTRLIDSGAAIARRAVWLINNHPDLILTKNKNIA 250
Query: 250 LFLSGKPDI 258
+
Sbjct: 251 YCTRMDVEA 259
>gi|227824990|ref|ZP_03989822.1| glutamate racemase [Acidaminococcus sp. D21]
gi|226905489|gb|EEH91407.1| glutamate racemase [Acidaminococcus sp. D21]
Length = 274
Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 6/255 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
Q I + DSG+GGL VL++++ LMP HFI++ D + PYGN + + + +
Sbjct: 1 MNKQQPIGVIDSGVGGLTVLRRLQELMPHEHFIFLGDTLNTPYGNRSREDIIRLVNQ-MT 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
D L V ACNT L ++ +R+ +G K T++G I I++T
Sbjct: 60 DYLSYRNIKALVAACNTITVLGEETIRNGH-DFEVIGMAKGSKMIPRVTKTGRIGIMATD 118
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ I + + + V L +E G E+K I+ +
Sbjct: 119 FTISTGAHKKEIQAAHPEYQVFGVGCPRLVPLIEHEQFG----TAELKDAIKEYTDILKS 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D ++L+CTHYP + V LD ++ A++ R L +
Sbjct: 175 HDVDTVMLSCTHYPFLKKEIEAAMGPAVTVLDPAEVTAKKCRYDLCERDLLCKTGTGTTE 234
Query: 250 LFLSGKPDIAMRRLM 264
+ + + +R
Sbjct: 235 ICFTTDLERGLRLAS 249
>gi|90414704|ref|ZP_01222675.1| glutamate racemase [Photobacterium profundum 3TCK]
gi|90324246|gb|EAS40821.1| glutamate racemase [Photobacterium profundum 3TCK]
Length = 263
Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats.
Identities = 91/262 (34%), Positives = 141/262 (53%), Gaps = 10/262 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +ILIFDSG+GGL V Q+++ LMP+ +IY D+ FPYG + L +R + +
Sbjct: 1 MVKTILIFDSGVGGLSVYQEIQSLMPQIQYIYAFDNAAFPYGELAEDVLLQRTQRIVCSL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+K+ L VIACNTA T++ LR S+ +G VPAIK AA +Q+ +I +L+TPAT
Sbjct: 61 AEKHNVDLVVIACNTASTIVLPILRENL-SVPVVGVVPAIKPAAILSQTKVIGLLATPAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R+YT LI S+ S C + ++ S L EE G+ + DEI + I+ K
Sbjct: 120 IHRSYTHELISSFASDCEVRMIGSTRLVEIAEEKLRGLPVSIDEIAEIIKPW-----QKD 174
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D I+L CTH+PLI RQ + +D+ +IA R + LL + + + +
Sbjct: 175 VDCIILGCTHFPLIKDEIRQALDKAIVIVDSGKAIANRVKGLLG--DLPSSYKKHLNLTY 232
Query: 252 LSG--KPDIAMRRLMQGFGLKS 271
S + A+ R ++ L +
Sbjct: 233 NSAATNNEAALNRSLEKIQLNA 254
>gi|312898722|ref|ZP_07758111.1| glutamate racemase [Megasphaera micronuciformis F0359]
gi|310620153|gb|EFQ03724.1| glutamate racemase [Megasphaera micronuciformis F0359]
Length = 270
Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats.
Identities = 56/258 (21%), Positives = 105/258 (40%), Gaps = 7/258 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K + I +FDSG+GGL V+ K+R L+P IYV D PYG + + + +
Sbjct: 6 KAEQPIGVFDSGVGGLTVVNKLRHLLPHEDIIYVGDTKRNPYGTRTQNEILTFTEQIIA- 64
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L++ Q L V ACNTA + ++R ++ LG I+ A + I++ +TP
Sbjct: 65 FLERRQVKLIVFACNTATAVAYMKMREKTKTL-LLGMSRGIETARHISTENRIAVFATPL 123
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + I LA+ +E ++ +E+++ +
Sbjct: 124 TIANHVHRDEAAQLDPSLTIVEQPCASLAALIER----GQLNTEEMRQAVTADTKPVLEA 179
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHA 249
D + CTHYP + +F ++ + ++D + A +A +L + +
Sbjct: 180 HVDTAIFGCTHYPFVQPLFEEICGDSIVFVDPAHETALQASAILKKEGLLNGQKERGRLR 239
Query: 250 LFLSGKPDIAMRRLMQGF 267
L + + +
Sbjct: 240 LCFTAEVQRGQKLAAHLL 257
>gi|220903374|ref|YP_002478686.1| glutamate racemase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219867673|gb|ACL48008.1| glutamate racemase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 311
Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats.
Identities = 61/300 (20%), Positives = 105/300 (35%), Gaps = 39/300 (13%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ + + +FDSG+GGL VL+ + +P +Y+ D PYG + + +
Sbjct: 2 NQSSRLPVGLFDSGMGGLTVLKALNHRLPGEDLLYLGDTARLPYGTKGPDTIVRYTLKAA 61
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILS 127
L + V+ACNTA LR F + LG V P + AA +++G I +L
Sbjct: 62 QK-LVDMGVKMLVVACNTATAAALPALRQHFAPLPVLGVVEPGAQAAAQASRNGHIVVLG 120
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT+ I + + + + EE + E ++ +EG F
Sbjct: 121 TEATINGGAYQQAIARIRPEAVVLGRACNLFVPLAEEGWMDGPLVEGVARRYLEGFFCAP 180
Query: 188 EGK-------------------------RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222
+ + D ++L CTHYPL+ R + V +D+
Sbjct: 181 DTNGANGSNDAASTAQPRAAAGAANAPVQPDTLLLGCTHYPLLQGALRHVVGPDVRIVDS 240
Query: 223 SDSIARRARCLLPRINTHQTRVFDDH------------ALFLSGKPDIAMRRLMQGFGLK 270
+ A+ L R+ + + +R G K
Sbjct: 241 AAITAQVVAGELARLEMLHPDTREGTGAAGMSCRTGQSRFLTTDHVARFIRTGSLFLGRK 300
>gi|332288965|ref|YP_004419817.1| glutamate racemase [Gallibacterium anatis UMN179]
gi|330431861|gb|AEC16920.1| glutamate racemase [Gallibacterium anatis UMN179]
Length = 262
Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats.
Identities = 86/264 (32%), Positives = 131/264 (49%), Gaps = 11/264 (4%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+IL FDSG+GGL V ++++ L+P YH++Y D+ FPY L++R + +
Sbjct: 1 MTKNPTILFFDSGVGGLSVYREVKALLPNYHYLYCLDNACFPYSEKPGKLLEQRCVEICQ 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
I Q L VIACNTA T++ +R+ F + +G VPAIK AA TQ+ +I +L+T
Sbjct: 61 KIATNQQIDLIVIACNTASTIVLPAMRAAF-NCPIVGTVPAIKPAAEKTQTKVIGLLATK 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ R Y +LI Y C + + S L E+ G KI I + + E E
Sbjct: 120 GTITRPYVDDLIQQYAKNCEVKRLGSTELVEIAEQKLHGKKIDHLAIMRAVAEWRYEYE- 178
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D +VL CTH+PL+ + P ++D+ +IARR + LL QT +D
Sbjct: 179 --MDTVVLGCTHFPLLKSELKACLPQVSFFIDSGKAIARRVQSLL----LSQTTTSNDKQ 232
Query: 250 L-FLSGKPDIAMRRLMQG--FGLK 270
+ + + D A +G K
Sbjct: 233 IAYCTAPFDDANDVKKMFCDWGFK 256
>gi|171742432|ref|ZP_02918239.1| hypothetical protein BIFDEN_01543 [Bifidobacterium dentium ATCC
27678]
gi|171278046|gb|EDT45707.1| hypothetical protein BIFDEN_01543 [Bifidobacterium dentium ATCC
27678]
Length = 262
Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats.
Identities = 60/261 (22%), Positives = 96/261 (36%), Gaps = 8/261 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I +FDSG+GG+ V +++R MP +Y D PYG ++ +
Sbjct: 5 MTSTAPIGVFDSGLGGISVAREIRKGMPNEQVLYFGDSANAPYGTKTPKQVRDLSFAIVE 64
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--S 127
+ + VIACNTA + D LR + + +G PA+K A Q ++ +
Sbjct: 65 RFV-QQGAKAIVIACNTATSAAADALRDAY-DVPIIGMEPALKLACERGQGQRQRVIVAA 122
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TP TLR + L+ + S I L VE+ D + + + F
Sbjct: 123 TPLTLRERKFAVLMDRFKSDHTIFPQPCPGLVEIVEQGRLD---DHDLVMRTLHDYFDRY 179
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-D 246
+ D +VL CTH+ FR+L P +D + R +L +
Sbjct: 180 DLSTIDSVVLGCTHFVFYRDYFRELLPDSAAIIDGNQGTVRHLSVVLESLGKLAPDQAVG 239
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
L S +
Sbjct: 240 GIELANSDTSERIAELAEALL 260
>gi|116490738|ref|YP_810282.1| glutamate racemase [Oenococcus oeni PSU-1]
gi|290890158|ref|ZP_06553240.1| hypothetical protein AWRIB429_0630 [Oenococcus oeni AWRIB429]
gi|122277078|sp|Q04G05|MURI_OENOB RecName: Full=Glutamate racemase
gi|116091463|gb|ABJ56617.1| glutamate racemase [Oenococcus oeni PSU-1]
gi|290480202|gb|EFD88844.1| hypothetical protein AWRIB429_0630 [Oenococcus oeni AWRIB429]
Length = 281
Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 48/264 (18%), Positives = 99/264 (37%), Gaps = 5/264 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V+++ +P +V D+ PYG ++K + + ++
Sbjct: 3 NRGIGYIDSGLGGLTVVREALKQLPNESVYFVGDEARMPYGPRPTVEIQKFTLQMADFLV 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K+ V+ACNTA +LR+ T++ ++++ T +T+
Sbjct: 63 KKHNIKALVVACNTATAQALPQLRAYLEIPVIGVISAGALAGINATRNLHVNVIGTQSTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG-KR 191
+ + + S I + VE G + + + I EK K+
Sbjct: 123 ESKAYYDQLIALNSDLVIEQKALPEFVQLVESDMAGTPKGKQIVYQAIHNWMEEKNDGKK 182
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA-- 249
+D +VL CTH+P++ + V +D + + ++ + N +H
Sbjct: 183 SDTLVLGCTHFPILKKEIQAAVDKNVAVVDPASEEILQTAEIMRKNNAFHDSKNINHHEK 242
Query: 250 --LFLSGKPDIAMRRLMQGFGLKS 271
+ +G + + +
Sbjct: 243 DVFYTTGNIGRFSKFTREWLNKSN 266
>gi|325684586|gb|EGD26745.1| glutamate racemase [Lactobacillus delbrueckii subsp. lactis DSM
20072]
Length = 261
Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 60/244 (24%), Positives = 100/244 (40%), Gaps = 6/244 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG GGL VL ++ LMP +++ D PYG + + + +++
Sbjct: 7 DRPIGVFDSGQGGLTVLSRLVDLMPNEDYVFYGDSANAPYGVKSKEEVYQLAKRVVDELI 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
DK+Q +IACNTA + D LR + S+ +G PA+K AA + ++TP TL
Sbjct: 67 DKHQVKAVMIACNTATSAAADRLRREY-SLPIIGIEPAVKPAAEENPGRQVVAMATPLTL 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + V + L +E+ I + +E GK
Sbjct: 126 EQDKFNQLVAECAEPGQVVKVPAPKLVELIEKGQT----DSPAIYQYLEELLAPYVGKAA 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
+VL CTH+P +++ D + A + L + LF
Sbjct: 182 -GVVLGCTHFPFAKQAIQEILGPQAKVYDGAIGAAAEVKRQLASRDELNASSQPGQILFE 240
Query: 253 SGKP 256
+ P
Sbjct: 241 NSAP 244
>gi|256839107|ref|ZP_05544617.1| glutamate racemase [Parabacteroides sp. D13]
gi|262382441|ref|ZP_06075578.1| glutamate racemase [Bacteroides sp. 2_1_33B]
gi|256740026|gb|EEU53350.1| glutamate racemase [Parabacteroides sp. D13]
gi|262295319|gb|EEY83250.1| glutamate racemase [Bacteroides sp. 2_1_33B]
Length = 276
Score = 205 bits (523), Expect = 4e-51, Method: Composition-based stats.
Identities = 55/261 (21%), Positives = 98/261 (37%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL + K+ LMP Y ++Y+ D+ PYG + + S L +
Sbjct: 8 PIGLFDSGYGGLTIFDKIHQLMPGYDYVYLGDNARSPYGTRSFEVVYQFTRQAVSR-LFE 66
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ACNTA + + +L + P+ LG + P ++ +++ I I+ T
Sbjct: 67 SGCQLVILACNTASAKALRTIQQKDLPTWDPNRRVLGVIRPTVELVDTISRTKHIGIVGT 126
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+ + I + + + VE + +KK I+
Sbjct: 127 SGTITSNSYTIEIGRMYPHIQVTGEACPMWVPLVENNEFNSPGADYFVKKHIDHILS--V 184
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFD 246
+ D ++L CTHYPL++ R P + + +A R L R +
Sbjct: 185 DPQIDTLILGCTHYPLLMDKIRAFLPSGITLFSQGEHVAESLRDYLGRHPEMDRKLTKGG 244
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ +
Sbjct: 245 SCRFLTTESAEKFSEAASIFM 265
>gi|255012458|ref|ZP_05284584.1| glutamate racemase [Bacteroides sp. 2_1_7]
Length = 276
Score = 205 bits (523), Expect = 4e-51, Method: Composition-based stats.
Identities = 55/261 (21%), Positives = 98/261 (37%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL + K+ LMP Y ++Y+ D+ PYG + + S L +
Sbjct: 8 PIGLFDSGYGGLTIFDKIHQLMPGYDYVYLGDNARSPYGTRSFEVVYQFTRQAVSR-LFE 66
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ACNTA + + +L + P+ LG + P ++ +++ I I+ T
Sbjct: 67 SGCQLVILACNTASAKALRTIQQKDLPTWDPNRRVLGVIRPTVELVDTISRTKHIGIVGT 126
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+ + I + + + VE + +KK I+
Sbjct: 127 SGTITSNSYTIEIGRMYPHIQVTGEACPMWVPLVENNEFNSPGADYFVKKHIDHILS--V 184
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFD 246
+ D ++L CTHYPL++ R P + + +A R L R +
Sbjct: 185 DPQIDTLILGCTHYPLLMDKIRAFLPSGITLFSQGEHVAESLRDYLGRHPEMDRKLTKGG 244
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ +
Sbjct: 245 SCRFLTTESAEKFSEAASIFM 265
>gi|309802168|ref|ZP_07696277.1| glutamate racemase [Bifidobacterium dentium JCVIHMP022]
gi|308221248|gb|EFO77551.1| glutamate racemase [Bifidobacterium dentium JCVIHMP022]
Length = 258
Score = 205 bits (523), Expect = 4e-51, Method: Composition-based stats.
Identities = 60/261 (22%), Positives = 96/261 (36%), Gaps = 8/261 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I +FDSG+GG+ V +++R MP +Y D PYG ++ +
Sbjct: 1 MTSTAPIGVFDSGLGGISVAREIRKGMPNEQVLYFGDSANAPYGTRTPKQVRDLSFAIVE 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--S 127
+ + VIACNTA + D LR + + +G PA+K A Q ++ +
Sbjct: 61 RFV-QQGAKAIVIACNTATSAAADALRDAY-DVPIIGMEPALKLACERGQGQRQRVIVAA 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TP TLR + L+ + S I L VE+ D + + + F
Sbjct: 119 TPLTLRERKFAVLMDRFKSDHTIFPQPCPGLVEIVEQGRLD---DHDLVMRTLHDYFDRY 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-D 246
+ D +VL CTH+ FR+L P +D + R +L +
Sbjct: 176 DLSTIDSVVLGCTHFVFYRDYFRELLPDSAAIIDGNQGTVRHLSVVLESLGKLAPDQAVG 235
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
L S +
Sbjct: 236 GIELANSDTSERIAELAEALL 256
>gi|116513625|ref|YP_812531.1| glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus
ATCC BAA-365]
gi|116092940|gb|ABJ58093.1| glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus
ATCC BAA-365]
Length = 261
Score = 205 bits (523), Expect = 4e-51, Method: Composition-based stats.
Identities = 60/244 (24%), Positives = 100/244 (40%), Gaps = 6/244 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG GGL VL ++ LMP +++ D PYG + + + +++
Sbjct: 7 DRPIGVFDSGQGGLTVLSRLVDLMPNEDYVFYGDSANAPYGVKSKEEVYQLAKRVVDELI 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
DK+Q +IACNTA + D LR + S+ +G PA+K AA + ++TP TL
Sbjct: 67 DKHQVKAVMIACNTATSAAADRLRREY-SLPIIGIEPAVKPAAEENPGRQVVAMATPLTL 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + V + L +E+ I + +E GK
Sbjct: 126 EQDKFNQLVAECAEPGQVVKVPAPKLVELIEKGQT----DSPAIYQYLEELLAPYVGKAA 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
+VL CTH+P +++ D + A + L + LF
Sbjct: 182 -GVVLGCTHFPFAKQAIQEILGPQAKVYDGAIGAAAEVKRQLASRDELNAGSQPGQILFE 240
Query: 253 SGKP 256
+ P
Sbjct: 241 NSAP 244
>gi|323495305|ref|ZP_08100385.1| glutamate racemase [Vibrio brasiliensis LMG 20546]
gi|323310440|gb|EGA63624.1| glutamate racemase [Vibrio brasiliensis LMG 20546]
Length = 264
Score = 205 bits (523), Expect = 4e-51, Method: Composition-based stats.
Identities = 80/258 (31%), Positives = 136/258 (52%), Gaps = 11/258 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
ILIFDSG+GGL V ++++ +P+ ++Y+ D+ +PYG + L R+ + S ++ +
Sbjct: 7 KILIFDSGVGGLSVYKEIQAQLPQLDYLYIFDNEAYPYGELDHDTLIARVDTIVSSLVAQ 66
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+Q L VIACNTA T++ LR+ S+ +G VPAIK A+ + + +++TPAT+ R
Sbjct: 67 HQIDLVVIACNTASTIVLPTLRAKL-SVPVVGVVPAIKPASNL-ANKAVGLIATPATITR 124
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
YT +LI + + L+ S L EE G + +E+K + + DV
Sbjct: 125 PYTHDLIRDFSQSKPVELLGSTRLVDIAEEKLRGKAVDLEELKNILAPM-----ESKIDV 179
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
VL CTH+PLI + + V +D+ ++IARR + LL +T+ ++ S
Sbjct: 180 AVLGCTHFPLIREEIQAVLTNHVQLVDSGEAIARRVKDLLVIEADAETQ--GKREIYSSA 237
Query: 255 KP--DIAMRRLMQGFGLK 270
P + A+ + + G
Sbjct: 238 PPWEEGALNQALYLLGFS 255
>gi|306822342|ref|ZP_07455721.1| glutamate racemase [Bifidobacterium dentium ATCC 27679]
gi|304554340|gb|EFM42248.1| glutamate racemase [Bifidobacterium dentium ATCC 27679]
Length = 262
Score = 205 bits (523), Expect = 4e-51, Method: Composition-based stats.
Identities = 60/261 (22%), Positives = 96/261 (36%), Gaps = 8/261 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I +FDSG+GG+ V +++R MP +Y D PYG ++ +
Sbjct: 5 MTSTAPIGVFDSGLGGISVAREIRKGMPNEQVLYFGDSANAPYGTRTPKQVRDLSFAIVE 64
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--S 127
+ + VIACNTA + D LR + + +G PA+K A Q ++ +
Sbjct: 65 RFV-QQGAKAIVIACNTATSAAADALRDAY-DVPIIGMEPALKLACERGQGQRQRVIVAA 122
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TP TLR + L+ + S I L VE+ D + + + F
Sbjct: 123 TPLTLRERKFAVLMDRFKSDHTIFPQPCPGLVEIVEQGRLD---DHDLVMRTLHDYFDRY 179
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-D 246
+ D +VL CTH+ FR+L P +D + R +L +
Sbjct: 180 DLSTIDSVVLGCTHFVFYRDYFRELLPDSAAIIDGNQGTVRHLSVVLESLGKLAPDQAVG 239
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
L S +
Sbjct: 240 GIELANSDTSERIAELAEALL 260
>gi|194468341|ref|ZP_03074327.1| glutamate racemase [Lactobacillus reuteri 100-23]
gi|194453194|gb|EDX42092.1| glutamate racemase [Lactobacillus reuteri 100-23]
Length = 267
Score = 205 bits (523), Expect = 4e-51, Method: Composition-based stats.
Identities = 55/255 (21%), Positives = 104/255 (40%), Gaps = 6/255 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL V++ +R MP+ I+V D FPYG +++ + + L
Sbjct: 3 KRPIGVMDSGLGGLSVIRVLREQMPQESVIFVGDQGHFPYGTKTKEQIQQLALRI-GKFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + +IACNTA L++ P + +G + AA I ++ T +T+
Sbjct: 62 LEQDVKMMIIACNTATAAALQLLQNELP-IPVIGVIEPGAMAATQHHYKKIGVIGTESTI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + ++ + + L S VE G E +K ++ + K
Sbjct: 121 KNGAYAKILAKLNPTLSVISSPAQPLVSIVEHGQTG----TSEAQKAVDTELEVFDNKSI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
+ ++L CTH+P + V +D + R+A+ LL N + L+
Sbjct: 177 EALILGCTHFPFLQKEIHNKLGSNVQLIDPAFETIRQAKELLTSENQLSDDLTSSIDLYS 236
Query: 253 SGKPDIAMRRLMQGF 267
+G + +
Sbjct: 237 TGDVKDLVAGAQKWL 251
>gi|217976585|ref|YP_002360732.1| glutamate racemase [Methylocella silvestris BL2]
gi|217501961|gb|ACK49370.1| glutamate racemase [Methylocella silvestris BL2]
Length = 279
Score = 205 bits (523), Expect = 4e-51, Method: Composition-based stats.
Identities = 109/266 (40%), Positives = 157/266 (59%), Gaps = 8/266 (3%)
Query: 12 LQNS--ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ IL+FDSG+GGL V ++ L P+ F+Y AD+ GFPYG AL R++ +
Sbjct: 1 MSRPPKILVFDSGLGGLTVFAEIAALRPDAQFVYAADEAGFPYGALPATALAPRVLAVMG 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
++D + P ++VIACNTA TL+ LR+ FP + F+G VPAIK AA +QS +IS+L+TP
Sbjct: 61 RLIDLFSPDVAVIACNTASTLVLPHLRAAFPDLPFVGTVPAIKPAAQTSQSKMISVLATP 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ R YT LI +Y + C + LV S LAS E++ G + I EI F+E EG
Sbjct: 121 GTVARDYTRGLIEAYAADCKVMLVGSSRLASLAEDFMQGDAPSDAAILDEIAPAFVEAEG 180
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI-----NTHQTRV 244
+RTD I LACTHYPL++ F +L+PWPV W+D + +IARR +L +T
Sbjct: 181 RRTDAIALACTHYPLLIAQFERLAPWPVAWIDPAPAIARRTDHVLTAELGFAAGGGETAR 240
Query: 245 FDDHALFL-SGKPDIAMRRLMQGFGL 269
A+F S + +R ++ G+
Sbjct: 241 KPALAVFTGSKEAGPKLREALRLRGI 266
>gi|118586558|ref|ZP_01544000.1| glutamate racemase [Oenococcus oeni ATCC BAA-1163]
gi|118432999|gb|EAV39723.1| glutamate racemase [Oenococcus oeni ATCC BAA-1163]
Length = 281
Score = 205 bits (523), Expect = 4e-51, Method: Composition-based stats.
Identities = 48/260 (18%), Positives = 99/260 (38%), Gaps = 5/260 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V+++ +P +V D+ PYG ++K + + ++
Sbjct: 3 NRGIGYIDSGLGGLTVVREALKQLPNESVYFVGDEARMPYGPRPTVEIQKFTLQMADFLV 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K+ V+ACNTA +L++ + T++ ++++ T +T+
Sbjct: 63 KKHNIKALVVACNTATAQALPQLKAYLEIPVIGVISAGALAGISATRNLHVNVIGTQSTV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG-KR 191
+ + + S I + VE G + + + I EK K+
Sbjct: 123 ESKAYYDQLIALNSDLVIEQKALPEFVQLVESDIAGTSQGKQIVYQAIHNWMEEKNDGKK 182
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA-- 249
+D +VL CTH+P++ + V +D + + +L + N +H
Sbjct: 183 SDTLVLGCTHFPILKKEIQAAVDKNVAVVDPASEEILQTAEILRKNNAFHDSKNINHHEK 242
Query: 250 --LFLSGKPDIAMRRLMQGF 267
+ +G + +
Sbjct: 243 DVFYTTGNIGRFSKFTREWL 262
>gi|294782801|ref|ZP_06748127.1| glutamate racemase [Fusobacterium sp. 1_1_41FAA]
gi|294481442|gb|EFG29217.1| glutamate racemase [Fusobacterium sp. 1_1_41FAA]
Length = 264
Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats.
Identities = 61/258 (23%), Positives = 106/258 (41%), Gaps = 10/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFSDI 71
+ I IFDSG+GG VL++M +P +IY D+ FPYG+ + ++K +
Sbjct: 5 RQRIGIFDSGLGGTTVLKEMMKALPNEDYIYYGDNGNFPYGSGKTKNEIQKLTERILDFF 64
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ L ++ACNTA T D LR FP IK A T++ I+++ST T
Sbjct: 65 VKN-NCKLVIVACNTASTAAIDYLRERFPLPILGIVEAGIKIARKNTKTKNIAVISTKFT 123
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
N ++ + ++ + +E +E+ + K + K
Sbjct: 124 AESHGYKNKAKMIDTELIVKEIACIEFPMMIETGWETFDNREELLNKYLAE-----IPKN 178
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHAL 250
D +VL CTHYPLI + + +D + I + + L ++ +
Sbjct: 179 VDTLVLGCTHYPLIRKDIENHT--NLKVVDPAVQIVDKVKQTLGSLDLLNDKKAKGKKIF 236
Query: 251 FLSGKPDIAMRRLMQGFG 268
F++G+ + G
Sbjct: 237 FVTGETYHFKPTAEKFLG 254
>gi|196229452|ref|ZP_03128317.1| glutamate racemase [Chthoniobacter flavus Ellin428]
gi|196226684|gb|EDY21189.1| glutamate racemase [Chthoniobacter flavus Ellin428]
Length = 295
Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats.
Identities = 60/272 (22%), Positives = 106/272 (38%), Gaps = 12/272 (4%)
Query: 1 MKIDNYP-CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHA 59
M D +P + + ++DSG GGL VL+++R +PE +IY+ D PYG +
Sbjct: 1 MPADFFPNASSPISCPVGVYDSGYGGLTVLRQLRRTLPELDYIYLGDSGRAPYGGRDVDT 60
Query: 60 LKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS---MAFLGAVPAIKQAAA 116
+ L + V+AC+T + L+ + S +PA + A
Sbjct: 61 ILDFAEQCVER-LFAEGCRVVVVACHTVSCVALRHLQHRYGSAERRILGVTIPAAEAAVN 119
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
T+ + + T T+ + ++ + V + +LA VE +
Sbjct: 120 RTRGHIGFV-GTARTVASHTFRTEVRKLNAEVKVTEVPAPLLAPIVE----EGWEDTEIA 174
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
+ ++ + D +VL CTHYPL+ F++L+P PV L+ + +A R R R
Sbjct: 175 RLAVQRYLAMFD--GVDTLVLGCTHYPLLEREFQELTPAPVQVLNPAPEVAERFRAWRER 232
Query: 237 INTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268
SG + + G
Sbjct: 233 HPGFAPAGSGRLRFLSSGDAARFAKHGARFLG 264
>gi|282858901|ref|ZP_06268041.1| glutamate racemase [Prevotella bivia JCVIHMP010]
gi|282588283|gb|EFB93448.1| glutamate racemase [Prevotella bivia JCVIHMP010]
Length = 294
Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats.
Identities = 58/274 (21%), Positives = 107/274 (39%), Gaps = 11/274 (4%)
Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61
N P + SI +FDSG GGL +L ++ ++PEY +IY+ D+ PYG+ +
Sbjct: 12 SSKNMPFYPQQPGSIGVFDSGYGGLTILHGIQQVLPEYDYIYLGDNARAPYGSRSFEVVY 71
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAA 115
+ L + L ++ CNTA + +++L P LG + P +
Sbjct: 72 EFTRQAVLK-LFEMGCHLVILGCNTASAKALRTIQQNDLPKLAPDRRVLGVIRPTAEVIG 130
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
+ T S + IL+T T+R + I + +S + +E +
Sbjct: 131 SLTSSRHVGILATEGTIRSQSYNIEIQKQSPDIQVTGLSCPLWVPIIENNEADSPGADYF 190
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235
+KK I+ I + + D ++L CTHYP+++ + V + + +A + L
Sbjct: 191 VKKRIDH--IMRLDPQIDTLILGCTHYPILMPKILKYVDRGVKIVPQGEYVAASLKDYLQ 248
Query: 236 RINTH--QTRVFDDHALFLSGKPDIAMRRLMQGF 267
R + + + P
Sbjct: 249 RHPEMDERCTKHSSTKYYTTESPTKFKENARIFM 282
>gi|298373442|ref|ZP_06983431.1| glutamate racemase [Bacteroidetes oral taxon 274 str. F0058]
gi|298274494|gb|EFI16046.1| glutamate racemase [Bacteroidetes oral taxon 274 str. F0058]
Length = 282
Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats.
Identities = 50/261 (19%), Positives = 89/261 (34%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL VL+ + +P+Y ++Y+ D+ PYG + + L
Sbjct: 13 KIGVFDSGYGGLTVLKDIIEQLPQYDYVYLGDNARTPYGTRSYEVVYGYTLQCV-RRLFD 71
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLG------AVPAIKQAAAYTQSGLISILST 128
+ ++ACNTA ++ + P + + T++ + IL T
Sbjct: 72 MDCRIVILACNTASAKALRSIQQNDLPLIAPDRRVLGVIRPTAESIGSLTKTNTVGILGT 131
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+R I + + + +E + IKK I+ +
Sbjct: 132 TGTIRSQSYEIEIKKLFPRIEVVSQECPMWVPLIENNEHLTAGADYFIKKYIDSILA--K 189
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFD 246
D +VL CTHYPLI + P + + +A L R +
Sbjct: 190 NNNIDTLVLGCTHYPLIADSIARFVPEGIRIVHQGAIVAASLDDYLHRHPEQEQYCSKGS 249
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ + +
Sbjct: 250 TVEFYTTEAEGKFSEHASIFW 270
>gi|116626345|ref|YP_828501.1| glutamate racemase [Candidatus Solibacter usitatus Ellin6076]
gi|116229507|gb|ABJ88216.1| glutamate racemase [Candidatus Solibacter usitatus Ellin6076]
Length = 252
Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats.
Identities = 54/249 (21%), Positives = 92/249 (36%), Gaps = 15/249 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VLQ +R +P+ F+YV D PYG + + L
Sbjct: 2 IGVFDSGVGGLTVLQALRKRLPQREFLYVGDTARAPYGRKPAAMVAGFACEIAD-YLCGR 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA + EL + ++ A T++G I +++T AT+
Sbjct: 61 GVEAIVVACNTASAVALPELERRCKVPVWGVVDAGVEAATRMTRTGHIGVIATRATIASA 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ + +L VEE + + + + G D +
Sbjct: 121 AYQRRLE--ARGLRVWARECPMLVHLVEEGLAESEEADVLSRHYLSG------RPEIDTL 172
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYPL+ ++ + V +D++ A R + + +G
Sbjct: 173 ILGCTHYPLLRASLQRAAGGHVRLVDSASVTAERVAAAMT------DEGNGRVTYYATGD 226
Query: 256 PDIAMRRLM 264
Sbjct: 227 TKAFAHTAR 235
>gi|257468922|ref|ZP_05633016.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185]
gi|317063170|ref|ZP_07927655.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185]
gi|313688846|gb|EFS25681.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185]
Length = 263
Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats.
Identities = 60/262 (22%), Positives = 101/262 (38%), Gaps = 9/262 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K SI +FDSG+GG VL+ M ++P + IY AD PYG L+ +
Sbjct: 1 MKKDYSIGVFDSGVGGTTVLKIMAEILPHENMIYYADSGNAPYGKKTVEELQSLCFNIMD 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L + VIACNTA ++ + P K AA +++G I++L+TP
Sbjct: 61 FFLKN-RCKAVVIACNTATAAALTAIKERYDIPVIGVITPGSKAAANISKNGHIAVLATP 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T I + + ++ L + +EE + + + + I
Sbjct: 120 FTANSNAYGEEIKKFAKKASVYQEGCSELCTMIEEGWETFEDRGEILDGHISQF-----P 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDH 248
D +VL CTHYP+I + +D + L + + ++
Sbjct: 175 GSADTLVLGCTHYPIIREDIEKYFSG--KIVDPARETVIELIESLRDEDMLNNSKEKGKI 232
Query: 249 ALFLSGKPDIAMRRLMQGFGLK 270
F+SG + R + G +
Sbjct: 233 EFFVSGDKEQFRRTAEKFLGFE 254
>gi|158423846|ref|YP_001525138.1| glutamate racemase [Azorhizobium caulinodans ORS 571]
gi|158330735|dbj|BAF88220.1| glutamate racemase [Azorhizobium caulinodans ORS 571]
Length = 288
Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats.
Identities = 95/221 (42%), Positives = 138/221 (62%), Gaps = 1/221 (0%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+IL+FDSG+GGL V +++ P+ FIY ADD FPYG D AL R+ + ++
Sbjct: 21 PTILVFDSGLGGLSVFREVARARPDASFIYAADDAAFPYGALSDAALVARVSSVMDTLIA 80
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+P L V+ACNTA TL LR+ + F+G VPA+K A A + + +S+L+TP T+R
Sbjct: 81 ATRPTLVVVACNTASTLALPTLRAAH-GLPFVGTVPAVKPACAASVTRKVSVLATPGTVR 139
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT++L+ + C + LV S LA E G I +++++ EI CF+ E RTD
Sbjct: 140 RDYTASLVRDFAGSCEVTLVPSPRLAELAEAVMRGAAIDDEDLRAEIAPCFVRSETGRTD 199
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+VLACTHYPLIV R+++PWPV+++D + +IARR LL
Sbjct: 200 TVVLACTHYPLIVDQLRRVAPWPVNFVDPAPAIARRVASLL 240
>gi|291456377|ref|ZP_06595767.1| glutamate racemase [Bifidobacterium breve DSM 20213]
gi|291381654|gb|EFE89172.1| glutamate racemase [Bifidobacterium breve DSM 20213]
Length = 264
Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats.
Identities = 61/266 (22%), Positives = 101/266 (37%), Gaps = 13/266 (4%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I +FDSG+GG+ V +++ MP H +Y D PYG +K +
Sbjct: 1 MSSSAPIGVFDSGLGGISVAREIAKDMPAEHVLYFGDSANAPYGVKTPEQVKALSFDIVE 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--------AYTQSG 121
+ ++ VIACNTA + ++LR + + +G PA+K A
Sbjct: 61 RFV-EHGVKAVVIACNTATSAAVNDLREHY-DIPIIGMEPALKVACDRGDAPLGQQHIPQ 118
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ + +TP TLR + L+ + S I L VE G D + + +
Sbjct: 119 RVIVAATPLTLRERKFAELMKRFDSDNTIFKEPCPDLVEIVESGQLGNH---DLVMRTLH 175
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
F + R D +VL CTH+ FR+L P +D ++ R +L +
Sbjct: 176 HYFDRYDLDRIDSVVLGCTHFVFYRDYFRELLPKHAAIIDGNEGTVRHLGVVLESLGKLA 235
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ P + +L
Sbjct: 236 PEDALGRVEISNSDPSERIAKLSHNL 261
>gi|329119913|ref|ZP_08248587.1| glutamate racemase [Neisseria bacilliformis ATCC BAA-1200]
gi|327464069|gb|EGF10380.1| glutamate racemase [Neisseria bacilliformis ATCC BAA-1200]
Length = 270
Score = 205 bits (522), Expect = 6e-51, Method: Composition-based stats.
Identities = 53/265 (20%), Positives = 101/265 (38%), Gaps = 9/265 (3%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
Q + +FDSG+GGL ++ + +P +Y D PYG ++ +
Sbjct: 2 NTAAQCPVGVFDSGVGGLTNVRALMERLPMESIVYFGDTARVPYGVKSRATIEAFTAQIV 61
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISILS 127
+L ++ VIACNT + ++R +M L + + A A T++ I +++
Sbjct: 62 GFML-EHDVKALVIACNTIAAVAGHKVRQMAGNMPVLDVISAGAEAALAATRNNHIGVIA 120
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+ + IH + V+ + VE + + +
Sbjct: 121 TNTTVNSNAYAREIHRKNPAARVQSVACPLFVPLVE----EGWLDHEVTRLTAREYLKPI 176
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVF 245
D +VL CTHYPL+ + + +P + +D++ + A A L +
Sbjct: 177 LADTADTLVLGCTHYPLLKPLLHREAP-GLTLVDSAATTAEAAARALCAHGLLNDGSGGA 235
Query: 246 DDHALFLSGKPDIAMRRLMQGFGLK 270
D+ ++S P + G
Sbjct: 236 PDYRFYVSDIPLRFQTIGERFLGRS 260
>gi|308047962|ref|YP_003911528.1| glutamate racemase [Ferrimonas balearica DSM 9799]
gi|307630152|gb|ADN74454.1| glutamate racemase [Ferrimonas balearica DSM 9799]
Length = 258
Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats.
Identities = 80/258 (31%), Positives = 128/258 (49%), Gaps = 8/258 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+IL+FDSG+GGL + Q +R +P + Y+AD+ FPYG L + + L + +
Sbjct: 3 AILLFDSGLGGLTIYQHIRQALPNRRYRYLADNARFPYGELAPDELVQGCVDLIRAQMAE 62
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L VIACN+A TL+ + LR+ +G VPAIK AAA + +I +L+TP T+RR
Sbjct: 63 EPIDLVVIACNSASTLVLEPLRAAI-DCPVVGVVPAIKPAAAMSHRKVIGLLATPGTVRR 121
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
YT L + + C + + S L E+ G + ++E E ++ DV
Sbjct: 122 PYTDELAAQFAADCELVRLGSSELVWLAEQKLAGQPVS----CSQLEPILGEFLQRQPDV 177
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VL CTH+PL+ Q+ V +D+ +IARR LL + + F +G
Sbjct: 178 VVLGCTHFPLLREEIGQVLGPQVRLIDSGAAIARRVSQLLG--GEEKEGAVFAASFFHTG 235
Query: 255 K-PDIAMRRLMQGFGLKS 271
+ P + ++ G +
Sbjct: 236 EAPAPSATVYLREQGFSN 253
>gi|330827753|ref|YP_004390705.1| glutamate racemase [Aeromonas veronii B565]
gi|328802889|gb|AEB48088.1| Glutamate racemase [Aeromonas veronii B565]
Length = 267
Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats.
Identities = 79/263 (30%), Positives = 130/263 (49%), Gaps = 12/263 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL+FDSG+GGL + +++R ++P +++ Y D+ FPYG + AL L + ++ ++
Sbjct: 4 ILVFDSGMGGLTIYREIRRVLPAHNYFYCFDNANFPYGELSEPALIAACTRLVTTMVARH 63
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
Q L VIACNTA T+ LR + +G VPAIK AAA T++G I +L+TP T+ R
Sbjct: 64 QIDLVVIACNTASTIALPALREAL-DIPVVGVVPAIKPAAAQTRNGCIGLLATPGTVSRD 122
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT LI + + L + L E G+ + +++ + ++ D +
Sbjct: 123 YTHELIAQFAPSKRVLLKGTTELVIEAEHKLSGLPVNMALLREVLADWLE--GEEKPDTL 180
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL----F 251
VL CTH+PL+ QL P +D+ ++A+R LL + + +
Sbjct: 181 VLGCTHFPLLNEEIGQLMPQ-CMLIDSGSAVAKRVAWLLNNGGHAAVQSVHIEEVIARAY 239
Query: 252 LS---GKPDIAMRRLMQGFGLKS 271
+ G+ L Q +GL S
Sbjct: 240 CTRLDGEAQKLTAPL-QAWGLSS 261
>gi|206603690|gb|EDZ40170.1| Glutamate racemase [Leptospirillum sp. Group II '5-way CG']
Length = 314
Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats.
Identities = 62/255 (24%), Positives = 102/255 (40%), Gaps = 7/255 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ P+ F Y+ D FPYG + + L
Sbjct: 12 IALFDSGVGGLTVLRHFWETFPDRDFAYLGDMARFPYGTKSRETILRFARENV-LFLQTL 70
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRR 134
P L V AC T + + EL FP + +G + A + A T++G + +L+T T+
Sbjct: 71 HPSLIVAACFTVSSQVLPELSREFPDVPIVGVLEAGARAACRLTRTGSVGVLATEGTISS 130
Query: 135 TYTSNLI-HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+I ++ + + A VEE I E +K +E D
Sbjct: 131 QAYPAVIGEMTAHAVRVYGQACPLFAPMVEEGVTEGPIAELVARKYLEPFLSVYRE--VD 188
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
I+L CTHYP + + P V ++D +A + + N + + +++
Sbjct: 189 TIILGCTHYPPLRRTMEAILPDVV-FVDPGQELAEELKKA-GKTNGYSGNALPERRFYVT 246
Query: 254 GKPDIAMRRLMQGFG 268
P +R G
Sbjct: 247 DSPKRFVRIGENLLG 261
>gi|119773335|ref|YP_926075.1| glutamate racemase [Shewanella amazonensis SB2B]
gi|119765835|gb|ABL98405.1| glutamate racemase [Shewanella amazonensis SB2B]
Length = 266
Score = 205 bits (521), Expect = 7e-51, Method: Composition-based stats.
Identities = 84/258 (32%), Positives = 135/258 (52%), Gaps = 6/258 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
IL+FDSGIGGL VL ++R L+P F Y+ D+ PYG + L + L
Sbjct: 7 RPILVFDSGIGGLSVLSEIRQLLPSNDFYYLFDNARLPYGELTEQVLVDGCVELVVSAAT 66
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
K L VIACNTA TL+ LRS ++ +G VPAIK AA++T SG I +L+TPAT++
Sbjct: 67 KINAALVVIACNTASTLVLPVLRSKL-TIPVVGVVPAIKPAASHTLSGHIGLLATPATVK 125
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R+YT L+ + S C +H+ S L E+ G+ + +++ G + + D
Sbjct: 126 RSYTHELVTKFASDCQVHMFGSSELVMMAEQKMAGVPVD----MEKLTGILAPIQATQVD 181
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA-LFL 252
V+VL CTH+P++ + Q+ + LD+ +IA R + +L + HQ + +
Sbjct: 182 VLVLGCTHFPMLAYELSQILGPGIKLLDSGFAIASRVQHVLEGLGEHQHPAPNSMKAWYT 241
Query: 253 SGKPDIAMRRLMQGFGLK 270
+ + + + + +G
Sbjct: 242 TPSLTLGLIQSLTDYGFS 259
>gi|92117194|ref|YP_576923.1| glutamate racemase [Nitrobacter hamburgensis X14]
gi|91800088|gb|ABE62463.1| glutamate racemase [Nitrobacter hamburgensis X14]
Length = 265
Score = 205 bits (521), Expect = 7e-51, Method: Composition-based stats.
Identities = 99/258 (38%), Positives = 147/258 (56%), Gaps = 5/258 (1%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+IL+ DSG+GGL VL+++ +P ++YVADD FPYG+ + + R++ L +++D
Sbjct: 5 PTILVLDSGLGGLTVLREIVKALPGARYVYVADDAFFPYGHHSEDEIIARVVPLVGELID 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
Y P L+VIACNT + LR+ + S+ F+G VPAIK A A +++ +S+L T AT++
Sbjct: 65 TYTPDLAVIACNTMSVSVLGPLRAAY-SVPFVGTVPAIKPACAASKTKRVSVLGTRATVQ 123
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK--- 190
R YT LI + C + LV + LA E+ G + + +I EI CF+
Sbjct: 124 REYTQALIRDHARACTVTLVGAAHLARLAEDALRGKPVSDADIVSEIAPCFVPAADGGAL 183
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
RTD +VLACTHYPL++ +L+PWPV W+D + +IARR LL R F +
Sbjct: 184 RTDAVVLACTHYPLLLDRLLRLAPWPVAWIDPAPAIARRVVDLLGP-GDSGGREFPPEMI 242
Query: 251 FLSGKPDIAMRRLMQGFG 268
F SG+ L FG
Sbjct: 243 FTSGRSRTLTDALAPFFG 260
>gi|197336453|ref|YP_002157219.1| glutamate racemase [Vibrio fischeri MJ11]
gi|226707593|sp|B5FCA3|MURI_VIBFM RecName: Full=Glutamate racemase
gi|197317943|gb|ACH67390.1| glutamate racemase [Vibrio fischeri MJ11]
Length = 261
Score = 205 bits (521), Expect = 7e-51, Method: Composition-based stats.
Identities = 79/261 (30%), Positives = 129/261 (49%), Gaps = 10/261 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ ILIFDSGIGGL V +++++ +P +IY D+ FPYG + L +R + S++
Sbjct: 1 MPKHILIFDSGIGGLSVYKEIKYQLPLAKYIYAFDNAAFPYGELTESVLIERTTHIISEL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
++ + VIACNTA T++ LR + +G VPAIK AA + I +L+TPAT
Sbjct: 61 CSQFPIDIVVIACNTASTVVLPSLRDKL-DIPVVGVVPAIKPAALVSNK--IGLLATPAT 117
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R+YT +LI S+ + L+ S L EE GI + + + K
Sbjct: 118 VKRSYTYDLIKSFAPISDVQLLGSTRLVEMAEEKMIGIDVD-----MRAKRDLSPWQNK- 171
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D IVL CTH+P + + ++ + +D+ ++IARR + LL +F+
Sbjct: 172 VDTIVLGCTHFPFLKNEIKKALGNKILLIDSGEAIARRVKQLLNGDGVESAVLFEGEVFC 231
Query: 252 -LSGKPDIAMRRLMQGFGLKS 271
+ A+ + S
Sbjct: 232 SAPSIKEEALNHTFKELNFSS 252
>gi|237740114|ref|ZP_04570595.1| glutamate racemase [Fusobacterium sp. 2_1_31]
gi|229422131|gb|EEO37178.1| glutamate racemase [Fusobacterium sp. 2_1_31]
Length = 264
Score = 205 bits (521), Expect = 7e-51, Method: Composition-based stats.
Identities = 61/258 (23%), Positives = 107/258 (41%), Gaps = 10/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFSDI 71
+ I IFDSG+GG VL++M +P +IY D+ FPYG+ + ++K +
Sbjct: 5 RQRIGIFDSGLGGTTVLKEMMKALPNEDYIYYGDNGNFPYGSGKTKNEIQKLTERILDFF 64
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ L ++ACNTA T D LR FP IK A T++ I+++ST T
Sbjct: 65 VKN-NCKLVIVACNTASTAAIDYLREKFPLPILGIVEAGIKIARKNTKTKNIAVISTKFT 123
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
N ++ ++ ++ + +E +E+ + K + K
Sbjct: 124 AESHGYKNKAKMIDTELNVKEIACVEFPMMIETGWDTFDNREELLNKYLAE-----IPKN 178
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHAL 250
D +VL CTHYPLI + + +D + I + + L ++ +
Sbjct: 179 VDTLVLGCTHYPLIRKDIEDRT--KLKVVDPAVQIVDKVKQTLGSLDLLNDKKAKGKKIF 236
Query: 251 FLSGKPDIAMRRLMQGFG 268
F++G+ + G
Sbjct: 237 FVTGETYHFKPTAEKFLG 254
>gi|23336033|ref|ZP_00121262.1| COG0796: Glutamate racemase [Bifidobacterium longum DJO10A]
gi|23464712|ref|NP_695315.1| glutamate racemase [Bifidobacterium longum NCC2705]
gi|189438967|ref|YP_001954048.1| glutamate racemase [Bifidobacterium longum DJO10A]
gi|227546821|ref|ZP_03976870.1| glutamate racemase [Bifidobacterium longum subsp. infantis ATCC
55813]
gi|239620799|ref|ZP_04663830.1| glutamate racemase [Bifidobacterium longum subsp. infantis CCUG
52486]
gi|317481620|ref|ZP_07940656.1| Asp/Glu/Hydantoin racemase [Bifidobacterium sp. 12_1_47BFAA]
gi|322689588|ref|YP_004209322.1| glutamate racemase [Bifidobacterium longum subsp. infantis 157F]
gi|322691549|ref|YP_004221119.1| glutamate racemase [Bifidobacterium longum subsp. longum JCM 1217]
gi|29839545|sp|Q8G7Z8|MURI_BIFLO RecName: Full=Glutamate racemase
gi|229486231|sp|B3DQ51|MURI_BIFLD RecName: Full=Glutamate racemase
gi|23325278|gb|AAN23951.1| glutamate racemase [Bifidobacterium longum NCC2705]
gi|189427402|gb|ACD97550.1| Glutamate racemase [Bifidobacterium longum DJO10A]
gi|227212783|gb|EEI80664.1| glutamate racemase [Bifidobacterium longum subsp. infantis ATCC
55813]
gi|239516375|gb|EEQ56242.1| glutamate racemase [Bifidobacterium longum subsp. infantis CCUG
52486]
gi|316916980|gb|EFV38366.1| Asp/Glu/Hydantoin racemase [Bifidobacterium sp. 12_1_47BFAA]
gi|320456405|dbj|BAJ67027.1| glutamate racemase [Bifidobacterium longum subsp. longum JCM 1217]
gi|320460924|dbj|BAJ71544.1| glutamate racemase [Bifidobacterium longum subsp. infantis 157F]
Length = 264
Score = 205 bits (521), Expect = 7e-51, Method: Composition-based stats.
Identities = 60/266 (22%), Positives = 103/266 (38%), Gaps = 13/266 (4%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I +FDSG+GG+ V +++ MP H +Y D PYG ++ +
Sbjct: 1 MSSSAPIGVFDSGLGGISVARQIAKDMPAEHVLYFGDSANAPYGIKTPEQVRALSFDIVE 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--------YTQSG 121
+ + VIACNTA + ++LR + + +G PA+K A +
Sbjct: 61 RFV-RQGVKAVVIACNTATSAAVNDLREHY-DIPIIGMEPALKVACDRGDVPSDPHHIPQ 118
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ + +TP TLR + L+ + S I L VE G D + + +
Sbjct: 119 RVIVAATPLTLRERKFAKLMDRFDSNNTIFKEPCPDLVEIVESGRLG---DHDLVMRTLH 175
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
G F + + + D +VL CTH+ FR+L P +D ++ R +L +
Sbjct: 176 GYFDQYDMEHIDSVVLGCTHFVFYRDYFRELLPERAAVIDGNEGTVRHLGVVLESLGKLA 235
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ P + L +
Sbjct: 236 PEDATGGVELANSDPSERIAELSRKL 261
>gi|167756830|ref|ZP_02428957.1| hypothetical protein CLORAM_02379 [Clostridium ramosum DSM 1402]
gi|237734546|ref|ZP_04565027.1| glutamate racemase [Mollicutes bacterium D7]
gi|167703005|gb|EDS17584.1| hypothetical protein CLORAM_02379 [Clostridium ramosum DSM 1402]
gi|229382366|gb|EEO32457.1| glutamate racemase [Coprobacillus sp. D7]
Length = 264
Score = 205 bits (521), Expect = 7e-51, Method: Composition-based stats.
Identities = 60/241 (24%), Positives = 97/241 (40%), Gaps = 6/241 (2%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
++ I DSG+GGL VL++ +MP FIY D + PYG ++ +
Sbjct: 3 INEERNLPIGFIDSGLGGLSVLKEAIKIMPHEDFIYYGDSLNAPYGTKSVDEIRDLTFAI 62
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
L K +ACNTA + +LR +P + +G PAIK A G I +++
Sbjct: 63 VDK-LLKLGIKGLAVACNTATSAAVRQLRIMYPDLTIVGIEPAIKPAVESNHGGEILVMA 121
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TP T+++ + L+ Y + I VS L VE ++ +
Sbjct: 122 TPMTIKQEKFNRLLDIYKDRAKIIPVSCKGLMEFVEHGNLNGSF----LEAYFNETLVPY 177
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPW-PVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
T+ IVL CTHYP + ++ + +D S + + L Q +
Sbjct: 178 LNDTTETIVLGCTHYPFLRPYLKEFLGERRIQIIDGSHGTSCELKRQLAGKKLLQKENHE 237
Query: 247 D 247
Sbjct: 238 G 238
>gi|227529708|ref|ZP_03959757.1| glutamate racemase [Lactobacillus vaginalis ATCC 49540]
gi|227350374|gb|EEJ40665.1| glutamate racemase [Lactobacillus vaginalis ATCC 49540]
Length = 266
Score = 204 bits (520), Expect = 8e-51, Method: Composition-based stats.
Identities = 49/255 (19%), Positives = 102/255 (40%), Gaps = 7/255 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I + DSG+GGL V++ ++ +P ++V D+ FPYG +++ ++ + L
Sbjct: 3 NRPIGVMDSGLGGLSVIRVIQQELPNESVVFVGDEGHFPYGTKSQELIRQLVLRI-GRFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
L VIACNTA ++ P P A +++ I +++T +T
Sbjct: 62 VAQPVKLMVIACNTATAAALSTVQKELPIPVIGVINPGATAAIE-SKASRIGVIATESTT 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + + ++ L + VE G E +K ++ + +
Sbjct: 121 KDGAYVRELKKLDPHVKVISKATQPLVAIVEHGKTG----TAEAQKTVDQQLASFDQEPV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTH+P + + Q V +D + + + LL + + + L+
Sbjct: 177 DALILGCTHFPFLANEISQKMGKKVKLIDPALETVNQVKKLLTAEHLLAQQAV-SYKLYS 235
Query: 253 SGKPDIAMRRLMQGF 267
+G + + +
Sbjct: 236 TGDRNDLIAGADKWL 250
>gi|307545641|ref|YP_003898120.1| glutamate racemase [Halomonas elongata DSM 2581]
gi|307217665|emb|CBV42935.1| glutamate racemase [Halomonas elongata DSM 2581]
Length = 258
Score = 204 bits (520), Expect = 8e-51, Method: Composition-based stats.
Identities = 80/258 (31%), Positives = 131/258 (50%), Gaps = 9/258 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL+FDSG+GGL V+ +R +PE Y D+ PYG ED L R++ +
Sbjct: 1 MAGPILVFDSGVGGLSVVASLRRRLPEAALAYACDNAMLPYGMREDDWLVGRILEVCESA 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ V+ACNTA TL + LR ++ +G VPAIK AA +++ I +L+T AT
Sbjct: 61 VAASGCAGLVVACNTASTLALEALRERL-TVPVVGTVPAIKPAAGMSETRHIGLLATSAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R YT LI + C + +++ L + E + G + D +++ + +
Sbjct: 120 VGRAYTLRLIREFAGDCRVTRIAADPLVTEAERWVAGERPDLDVLRRTLSP---MAQMPD 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTH+PL+ + +P PV W+D+ D+IARRA ++ + +
Sbjct: 177 LDTMVLGCTHFPLLRDWLIEFAPRPVRWVDSGDAIARRAGQVMADHQRRRGSETG----W 232
Query: 252 LSGKPDIAMRRLMQGFGL 269
++ P A+ R + GFG
Sbjct: 233 VTA-PSEALSRGLSGFGF 249
>gi|262067163|ref|ZP_06026775.1| glutamate racemase [Fusobacterium periodonticum ATCC 33693]
gi|291379121|gb|EFE86639.1| glutamate racemase [Fusobacterium periodonticum ATCC 33693]
Length = 264
Score = 204 bits (520), Expect = 8e-51, Method: Composition-based stats.
Identities = 61/258 (23%), Positives = 106/258 (41%), Gaps = 10/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFSDI 71
+ I IFDSG+GG VL++M +P +IY D+ FPYG+ + ++K +
Sbjct: 5 RQRIGIFDSGLGGTTVLKEMMKALPNEDYIYYGDNGNFPYGSGKTKNEIQKLTERILDFF 64
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ L ++ACNTA T D LR FP IK A T++ I+++ST T
Sbjct: 65 VKN-NCKLVIVACNTASTAAIDYLREKFPLPILGIVEAGIKIARKNTKTKNIAVISTKFT 123
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
N ++ ++ ++ + +E +E+ + K + K
Sbjct: 124 AESHGYKNKAKMIDTELNVKEIACVEFPMMIETGWETFDNREELLNKYLSE-----IPKN 178
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHAL 250
D +VL CTHYPLI + + +D + I + + L + +
Sbjct: 179 VDTLVLGCTHYPLIRKDIEDRT--KLKVVDPAVQIVDKVKQTLGSLELLNDKKTKGKKIF 236
Query: 251 FLSGKPDIAMRRLMQGFG 268
F++G+ + G
Sbjct: 237 FVTGETYHFKPTAEKFLG 254
>gi|313680798|ref|YP_004058537.1| glutamate racemase [Oceanithermus profundus DSM 14977]
gi|313153513|gb|ADR37364.1| glutamate racemase [Oceanithermus profundus DSM 14977]
Length = 260
Score = 204 bits (520), Expect = 8e-51, Method: Composition-based stats.
Identities = 55/261 (21%), Positives = 109/261 (41%), Gaps = 19/261 (7%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
L+ I +FDSG+GGL VL+ +R +P F+Y D PYG+ +++ +
Sbjct: 8 PLEQPIGVFDSGVGGLTVLEALRRALPGRDFLYFGDTARVPYGSKPPELVRRFAWEISGF 67
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+L + L V ACNTA ++ +L + PA+ +A + G + ++ T A
Sbjct: 68 LLRQGAVALVV-ACNTASSVALADL-ARLGVPVTGVIDPAVAEA---ERYGHVGVIGTRA 122
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + + + +++ + VEE + E + +EG +
Sbjct: 123 TVASGAYQSRLE--ARGKRVWSLATPLFVPIVEEGLWSDGVAELVARHYLEGAPDDL--- 177
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
+ ++L CTHYP + + + + +D+++ AR LP
Sbjct: 178 --EALILGCTHYPYLKPLLER-LRPGLTLIDSAEPTARAVARSLP-----AGPGSGRVVH 229
Query: 251 FLSGKPDIAMRRLMQGFGLKS 271
+++G P+ + G+ +
Sbjct: 230 YVTGDPEAYRALAAR-LGVPA 249
>gi|320095955|ref|ZP_08027573.1| glutamate racemase [Actinomyces sp. oral taxon 178 str. F0338]
gi|319977112|gb|EFW08837.1| glutamate racemase [Actinomyces sp. oral taxon 178 str. F0338]
Length = 275
Score = 204 bits (520), Expect = 9e-51, Method: Composition-based stats.
Identities = 56/263 (21%), Positives = 97/263 (36%), Gaps = 13/263 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V + + +P+ +Y+ D PYG ++ + L
Sbjct: 3 NAPIGIFDSGLGGLTVARAVIDKLPDEEVVYLGDTRHTPYGPRPVAQVRTYTLACLDQ-L 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTF----PSMAFLGAVPAIKQAAAYTQSGLISILST 128
+IACNTA + R + PA +QA T++G I ++ T
Sbjct: 62 ASMGVKALIIACNTATAAALADARERYWVDAGIPVIEVITPAARQAVTATRNGRIGVIGT 121
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ S+++ + + VE E++ +
Sbjct: 122 RATIQSEAYSHVLAAV-PGLSLTQRECPRFVEFVEAGIT----TGAELEAVATQYLAPLK 176
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH---QTRVF 245
D +VL CTHYPL+ V ++ V + +S++ A L + +
Sbjct: 177 EAGVDTLVLGCTHYPLLTGVIGRVMGEEVALVTSSEATANLTYNELVDRDLLHEPRGGAS 236
Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268
H + +G R + G
Sbjct: 237 PRHHFYSTGGSGDFGRLARRFLG 259
>gi|261368271|ref|ZP_05981154.1| glutamate racemase [Subdoligranulum variabile DSM 15176]
gi|282569788|gb|EFB75323.1| glutamate racemase [Subdoligranulum variabile DSM 15176]
Length = 271
Score = 204 bits (520), Expect = 9e-51, Method: Composition-based stats.
Identities = 55/257 (21%), Positives = 94/257 (36%), Gaps = 4/257 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GGL ++++R ++P +Y D PYG+ + + L
Sbjct: 3 KRPIGVFDSGLGGLTAVRQLRRVLPGEDIVYFGDTGRVPYGSRARDTIVQYARQDI-RFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ AC T + E + P A + A A T++ I I+ T AT+
Sbjct: 62 LSQDVKFIIAACGTVSSTFPPEEAARLPVPYTGVVGAASRAAVAATRNRKIGIIGTAATI 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R + +I + I + + VE + I
Sbjct: 122 RSGSYAAVIRDMMPDVQITAKACPLFVPLVENGYVQDG--NPVTQLVISDYLESVRAAGI 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH-ALF 251
D ++L CTHYPL+ + V +D+ A+ A L ++ R +
Sbjct: 180 DTLILGCTHYPLLKKMIGDYVGESVTLIDSGKVTAQAAAAALADLDLLNGRSEGGTARYY 239
Query: 252 LSGKPDIAMRRLMQGFG 268
+S PD + M G
Sbjct: 240 VSDTPDNFAEQEMLFLG 256
>gi|209696283|ref|YP_002264214.1| glutamate racemase [Aliivibrio salmonicida LFI1238]
gi|226707584|sp|B6ENT1|MURI_ALISL RecName: Full=Glutamate racemase
gi|208010237|emb|CAQ80568.1| glutamate racemase [Aliivibrio salmonicida LFI1238]
Length = 265
Score = 204 bits (520), Expect = 9e-51, Method: Composition-based stats.
Identities = 86/260 (33%), Positives = 143/260 (55%), Gaps = 9/260 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +ILIFDSGIGGL V + +R+ +P +IY D+ GFPYG + L +R ++ +
Sbjct: 1 MPKNILIFDSGIGGLSVFKDIRYQIPLAKYIYAFDNAGFPYGELTEDILIERTSYIIQKL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+++ + VIACNTA T++ LR T S+ +G VPAIK AA +Q I +L+TPAT
Sbjct: 61 CHRHKIDIVVIACNTASTVVLPTLR-TLLSIPVVGVVPAIKPAALVSQK--IGLLATPAT 117
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++R+YT +LI S+ S + L+ S L EE GI + E+ + ++ +
Sbjct: 118 IKRSYTFDLIKSFASISDVKLLGSTRLVEMAEEKMVGIPVNLIELDEILKSW-----KGQ 172
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHAL 250
D IVL CTH+P + +++ V +D+ ++IARR + LL ++ ++ +F +
Sbjct: 173 VDCIVLGCTHFPFLRKEIKEILGRNVLLIDSGEAIARRVKQLLGSVDANKGDHLFGEVYC 232
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
S K + A+ + +
Sbjct: 233 SASTKNEEALNKTFKELDFN 252
>gi|46204044|ref|ZP_00050583.2| COG0796: Glutamate racemase [Magnetospirillum magnetotacticum MS-1]
Length = 277
Score = 204 bits (520), Expect = 9e-51, Method: Composition-based stats.
Identities = 102/243 (41%), Positives = 148/243 (60%), Gaps = 2/243 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ IL+FDSG+GGL VL+++R P+ H++Y ADD FPYG + L R++ + +L
Sbjct: 7 EPVILVFDSGLGGLTVLEQVRRARPDAHYLYAADDAAFPYGRLSEPQLVARVIAVMERLL 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+Y P L VIACNTA T++ LR F + F+G VP IK AAA T+S L+S+L+TP T+
Sbjct: 67 TRYAPDLVVIACNTASTVVLPALRQRFVT-PFVGVVPPIKPAAALTRSRLVSLLATPGTV 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE-KEGKR 191
R YT +L+ ++ + C + LV S LA E G + + I EI CF+ +G+R
Sbjct: 126 ARAYTHDLVENFAADCAVTLVGSQNLARYAEAEMAGAPVADAAILAEIAPCFVTGADGRR 185
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
TDV+ L+CTHYPL++ F +L+PWPV W+D + +IARR LL + A+F
Sbjct: 186 TDVVCLSCTHYPLLLGRFERLAPWPVIWIDPAPAIARRVVQLLGAALAARPEPPAARAIF 245
Query: 252 LSG 254
G
Sbjct: 246 TGG 248
>gi|260910465|ref|ZP_05917134.1| glutamate racemase [Prevotella sp. oral taxon 472 str. F0295]
gi|260635411|gb|EEX53432.1| glutamate racemase [Prevotella sp. oral taxon 472 str. F0295]
Length = 279
Score = 204 bits (520), Expect = 9e-51, Method: Composition-based stats.
Identities = 55/273 (20%), Positives = 100/273 (36%), Gaps = 14/273 (5%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
++ +P + I +FDSG GGL +L +R L+P+Y ++Y+ D+ PYG + +
Sbjct: 1 MNKFPQQAG---PIGVFDSGYGGLTILHGIRQLLPQYDYLYLGDNARAPYGPRSFDVVYQ 57
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTF------PSMAFLGAVPAIKQAAA 116
L + L +I CNTA ++ P + +
Sbjct: 58 FTRQAVIK-LFEQGCHLIIIGCNTASAKALRSIQQRDLPSLDAKRRVLGIIRPTAETIGS 116
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
T + + IL+T T++ I + ++ + A+ VE + +
Sbjct: 117 LTATRHVGILATEGTIKSDSYRLEIQKLFPDIQVQGMACPLWAAIVEANEADSPGADYFV 176
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
KK I+ + + D IVL CTHYPL+++ + P V + + +A + L R
Sbjct: 177 KKRIDALM--RTDPQIDAIVLGCTHYPLLMNSIVKHVPSGVRIVPQGEYVANSLQQYLQR 234
Query: 237 INTHQ--TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ D
Sbjct: 235 HPEIDALCTKQGTVRYLTTENKDKFKENAQIFL 267
>gi|298374652|ref|ZP_06984610.1| glutamate racemase [Bacteroides sp. 3_1_19]
gi|298269020|gb|EFI10675.1| glutamate racemase [Bacteroides sp. 3_1_19]
Length = 276
Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats.
Identities = 54/261 (20%), Positives = 97/261 (37%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL + K+ LMP Y ++Y+ D+ PYG + + L +
Sbjct: 8 PIGLFDSGYGGLTIFDKIHQLMPGYDYVYLGDNARSPYGTRSFEVVYQFTRQAVLR-LFE 66
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ACNTA + + +L + P+ LG + P ++ +++ I I+ T
Sbjct: 67 SGCQLVILACNTASAKALRTIQQKDLPTWDPNRRVLGVIRPTVELVDTISRTKHIGIVGT 126
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+ + I + + + VE + +KK I+
Sbjct: 127 SGTITSNSYTIEIGRMYPHIQVTGEACPMWVPLVENNEFNSPGADYFVKKHIDHILS--V 184
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFD 246
+ D ++L CTHYPL++ R P + + +A R L R +
Sbjct: 185 DPQIDTLILGCTHYPLLMDKIRAFLPSGITLFSQGEHVAESLRDYLGRHPEMDRKLTKGG 244
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ +
Sbjct: 245 SCRFLTTESAEKFSEAASIFM 265
>gi|260435366|ref|ZP_05789336.1| glutamate racemase [Synechococcus sp. WH 8109]
gi|260413240|gb|EEX06536.1| glutamate racemase [Synechococcus sp. WH 8109]
Length = 265
Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats.
Identities = 61/256 (23%), Positives = 102/256 (39%), Gaps = 13/256 (5%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
FDSG+GGL VL+++ +Y+ D PYGN + +++ + L Q
Sbjct: 7 GFFDSGLGGLTVLRRVLERHGPVPCVYLGDTARVPYGNRQPDDIRRIAAEVVG-WLRNQQ 65
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACNT L R A + + I AAA ++ + +L+TPAT+ +
Sbjct: 66 VSTVVMACNTTNAL----ARDVAEGQAGVPLIGLIGAAAAMVETRRVGVLATPATVASSA 121
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
I + + + +E + D++++ + D IV
Sbjct: 122 YRASIEALHPGSVVIEQACPAFVPLIEAGE----MNSDDLRRAAQAYLEPLLAASVDSIV 177
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD----DHALFL 252
L CTHYPL+V + RQL P V +D + +AR+ +L + +
Sbjct: 178 LGCTHYPLLVPLLRQLVPESVQIIDPAIGVARQLDAILGPPAGISSAPRPFSLQSCRFCV 237
Query: 253 SGKPDIAMRRLMQGFG 268
+ PD R G
Sbjct: 238 TADPDGFAVRATPWLG 253
>gi|331005029|ref|ZP_08328434.1| Glutamate racemase [gamma proteobacterium IMCC1989]
gi|330421157|gb|EGG95418.1| Glutamate racemase [gamma proteobacterium IMCC1989]
Length = 273
Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats.
Identities = 81/250 (32%), Positives = 125/250 (50%), Gaps = 7/250 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
IL+FDSG+GGL +LQ++R P F Y +D+ FPYG + L +R+ +
Sbjct: 1 MTAAARILVFDSGVGGLSILQEIRRQYPHCCFFYASDNAAFPYGTKTEEELIERVDIVLH 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ Q + V+ACNTA T+ +R F S +G VPAIK AAA +QS +I +L+TP
Sbjct: 61 TLQQTTQADIIVVACNTASTVALPRIRERF-SQPVIGVVPAIKPAAALSQSKVIGVLATP 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++R YT LI + C + + + L E+ G I + +++ ++
Sbjct: 120 GTVKRKYTQQLIAQFAEDCEVISIGTSELVHLAEQKLRGETITQQQLEPIVQRLIH---N 176
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT---HQTRVFD 246
D +VLACTH+PL+ + P W+D+ ++IARR L +N D
Sbjct: 177 SAIDTVVLACTHFPLLKKELQTALPNIKHWIDSGEAIARRVGYWLDTLNIDLGDHASNTD 236
Query: 247 DHALFLSGKP 256
A F + P
Sbjct: 237 STAYFTAQSP 246
>gi|323144068|ref|ZP_08078711.1| glutamate racemase [Succinatimonas hippei YIT 12066]
gi|322416144|gb|EFY06835.1| glutamate racemase [Succinatimonas hippei YIT 12066]
Length = 267
Score = 204 bits (520), Expect = 1e-50, Method: Composition-based stats.
Identities = 78/259 (30%), Positives = 132/259 (50%), Gaps = 7/259 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+L FDSG+GG V ++ L P + Y+ D+ FPYGN ++ + KR + + + ++
Sbjct: 4 VLFFDSGLGGTSVFSAVKELNPNCSYYYLFDNECFPYGNKDEAFIIKRTDEILEESVRRF 63
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L ++ACNTA T+ +LR + +G VPAIK AA ++S +I +++TP T+RR
Sbjct: 64 SVSLIIVACNTASTVALPKLRDRIK-IPIVGVVPAIKPAAIKSKSKIIGLVATPGTIRRA 122
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT++LI + C + + + L E G + E+ + + K +R D I
Sbjct: 123 YTNDLIEKFAKDCKVLKIGTTDLVRLCERKMAGKPVTLTEVAEVFGPWLMLKPEERPDSI 182
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL--LPRINTHQTRVFDDHALFLS 253
VL CTH+PL+ L P V +D+ ++I RR R L L + +++ +HA + +
Sbjct: 183 VLGCTHFPLVKDEIGTLFPDAV-LVDSGEAIGRRVRSLISLNQAPSYEEISDGNHAFY-T 240
Query: 254 GKPDIAM--RRLMQGFGLK 270
G + + G K
Sbjct: 241 GNLENLSGYENAFKSLGFK 259
>gi|255037214|ref|YP_003087835.1| glutamate racemase [Dyadobacter fermentans DSM 18053]
gi|254949970|gb|ACT94670.1| glutamate racemase [Dyadobacter fermentans DSM 18053]
Length = 269
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 105/258 (40%), Gaps = 7/258 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSGIGG+ V + L+P+ + IY D PYG+ A++ + + + +L
Sbjct: 5 SAPIGIFDSGIGGMTVASAVTKLLPQENTIYFGDTAHLPYGDKSTAAIQAYSIKICN-ML 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAVPAIKQAAAYTQSGLISILSTPA 130
+ L +IACN+A + +R S A P + + + I ++ T
Sbjct: 64 LQQNCKLILIACNSASAAAYELVREYVGSKAKVLNVIDPVVDYVKEHYEGKTIGLIGTKQ 123
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + + H+ +++ +LA +EE I E I +
Sbjct: 124 TVLSNVYKKKVDALDRNIHLKSLATPLLAPMIEEGFFDNNISESV----IANYLSDASLD 179
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
+ ++L CTHYPLI R+ ++ LD S+ +AR + L + +
Sbjct: 180 GIEALILGCTHYPLIKTQIRKFYGEAIETLDTSEIVARSLKAWLEQHYLINEKGEGKRQF 239
Query: 251 FLSGKPDIAMRRLMQGFG 268
++S + FG
Sbjct: 240 YVSDYTLSFEQSTNIFFG 257
>gi|300811367|ref|ZP_07091863.1| glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|300497602|gb|EFK32628.1| glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
Length = 261
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 59/244 (24%), Positives = 99/244 (40%), Gaps = 6/244 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG GGL VL ++ LMP +++ D PYG + + + +++
Sbjct: 7 DRPIGVFDSGQGGLTVLSRLVDLMPNEDYVFYGDSANAPYGVKSKEEVYQLAKRVVDELI 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
DK+Q +IACNTA + D LR + S+ +G PA+K AA + ++T TL
Sbjct: 67 DKHQVKAVMIACNTATSAAADRLRREY-SLPIIGIEPAVKPAAEENPGRQVVAMATSLTL 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + V + L +E+ I + +E GK
Sbjct: 126 EQDKFNQLVAECAEPGQVAKVPAPKLVELIEKGQT----DSPAIYQYLEELLAPYAGKAA 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
+VL CTH+P +++ D + A + L + LF
Sbjct: 182 -GVVLGCTHFPFAKQAIQEILGPQAKVYDGAIGAAAEVKRQLASRDELNASSQPGQILFE 240
Query: 253 SGKP 256
+ P
Sbjct: 241 NSAP 244
>gi|213691663|ref|YP_002322249.1| glutamate racemase [Bifidobacterium longum subsp. infantis ATCC
15697]
gi|254766108|sp|B7GPZ1|MURI_BIFLI RecName: Full=Glutamate racemase
gi|213523124|gb|ACJ51871.1| glutamate racemase [Bifidobacterium longum subsp. infantis ATCC
15697]
gi|320457754|dbj|BAJ68375.1| glutamate racemase [Bifidobacterium longum subsp. infantis ATCC
15697]
Length = 264
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 61/266 (22%), Positives = 104/266 (39%), Gaps = 13/266 (4%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I +FDSG+GG+ V +++ MP H +Y D PYG ++ +
Sbjct: 1 MSSSAPIGVFDSGLGGISVARQIAKDMPAEHVLYFGDSANAPYGIKTPEQVRALSFDIVE 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--------YTQSG 121
+ + VIACNTA + ++LR + + +G PA+K A +
Sbjct: 61 RFV-RQGVKAVVIACNTATSAAVNDLREHY-DIPIIGMEPALKVACDRGDVPSDPHHIPQ 118
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ + +TP TLR + L+ + SQ I L VE G D + + +
Sbjct: 119 RVIVAATPLTLRERKFATLMDRFDSQNTIFKEPCPDLVEIVESGRLG---DHDLVMRTLH 175
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
G F + + + D +VL CTH+ FR+L P +D ++ R +L +
Sbjct: 176 GYFDQYDMEHIDSVVLGCTHFVFYRDYFRELLPERAAVIDGNEGTVRHLGVVLESLGKLA 235
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ P + L +
Sbjct: 236 PEGATGGVELANSDPSERIAELSRKL 261
>gi|145636801|ref|ZP_01792467.1| glutamate racemase [Haemophilus influenzae PittHH]
gi|145270099|gb|EDK10036.1| glutamate racemase [Haemophilus influenzae PittHH]
Length = 257
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 71/252 (28%), Positives = 122/252 (48%), Gaps = 5/252 (1%)
Query: 21 SGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80
SG+GG + ++ + L+P +H++Y D+ GFPY E+ ++ R + I +Y
Sbjct: 3 SGVGGFSIYREAKKLLPNWHYLYCFDNAGFPYSEREEESIIHRTLAACQLINQRYPLDAI 62
Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNL 140
VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+T T++R Y L
Sbjct: 63 VIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLATKGTVKRHYIDEL 121
Query: 141 IHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
I + C + + + L E+ G + +K E+ D +VL CT
Sbjct: 122 IDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPWAGM---ADLDTLVLGCT 178
Query: 201 HYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDI-A 259
H+PLI + P ++D S +IA+R + LL N + + P+
Sbjct: 179 HFPLIKDEIQLCLPQVKYFMDPSAAIAKRIKYLLDDKNLQAQNEKYNQMFCTAHFPEESQ 238
Query: 260 MRRLMQGFGLKS 271
++ + +G +S
Sbjct: 239 FKKALHLWGFES 250
>gi|313893755|ref|ZP_07827321.1| glutamate racemase [Veillonella sp. oral taxon 158 str. F0412]
gi|313441319|gb|EFR59745.1| glutamate racemase [Veillonella sp. oral taxon 158 str. F0412]
Length = 267
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 59/256 (23%), Positives = 107/256 (41%), Gaps = 7/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL VL+ ++ P FIY+ D+ P GN D + + L
Sbjct: 6 QLPIGVFDSGVGGLSVLKVLQEQFPNEDFIYIGDNANNPVGNRSDDEITFLACRIAEA-L 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+K L VIACNT + DE+R S+ +G +K A + ++S I I++T AT+
Sbjct: 65 EKQPVKLMVIACNTFTVVALDEVRERV-SVPVIGVSQGVKTAISESKSNTIGIMATVATV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
++ + + LA +E+ ++ E +
Sbjct: 124 NSHIHKHVALEVDPEVLVWEQPCPELAGLIEQGHLDDFF----VRDVCEEYVEPLLSREI 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALF 251
DV+VL CTH+P + + +L+ + ++D + + +L N + + L+
Sbjct: 180 DVVVLGCTHFPFVKPLLEELTAGRIQFVDPAYETSNLVCRILEHKNLYNPQENLGTVKLY 239
Query: 252 LSGKPDIAMRRLMQGF 267
+ ++
Sbjct: 240 FTKDIELGDILSASFL 255
>gi|54310515|ref|YP_131535.1| glutamate racemase [Photobacterium profundum SS9]
gi|46914958|emb|CAG21733.1| putative glutamate racemase [Photobacterium profundum SS9]
Length = 262
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 85/226 (37%), Positives = 130/226 (57%), Gaps = 6/226 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
++LIFDSG+GGL V Q+++ L+P+ +IY D+ FPYG E+ L +R + + +
Sbjct: 2 KTVLIFDSGVGGLSVYQELQALIPQVQYIYAFDNAAFPYGELEEDVLLQRTQHIVCSLAE 61
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++ L VIACNTA T++ LR + S+ +G VPAIK AA +Q+ +I +L+TPAT+
Sbjct: 62 QHNVDLVVIACNTASTIVLPTLRESL-SIPVVGVVPAIKPAATLSQTKVIGLLATPATIH 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R+YT LI S+ S C + ++ S L EE G+ + DEI + I+ K D
Sbjct: 121 RSYTHELISSFASDCEVRMIGSTRLVEIAEEKLRGLPVSIDEIAEIIKPW-----QKDVD 175
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
I+L CTH+PLI RQ + +D+ +IA R + LL +
Sbjct: 176 CIILGCTHFPLIKDEIRQALDKAIVIVDSGKAIANRVKDLLGDLPL 221
>gi|118594500|ref|ZP_01551847.1| glutamate racemase [Methylophilales bacterium HTCC2181]
gi|118440278|gb|EAV46905.1| glutamate racemase [Methylophilales bacterium HTCC2181]
Length = 267
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 70/227 (30%), Positives = 106/227 (46%), Gaps = 5/227 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K SI +FDSG+GG+ VL+K++ +MP FIYVAD PYG ++KR +
Sbjct: 1 MKNIPSIGVFDSGVGGISVLEKLQQVMPSERFIYVADSKFAPYGQMTSQEIQKRAFIIID 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
++ + L V+ACNTA ELR + ++ +G PA+K A + I IL+T
Sbjct: 61 FLIQHHSIKLIVVACNTATAACIHELRRNY-NLPIIGMEPAVKPAIFASTKKKIGILATE 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
TL+ T L+ +Y + ++ + L +E I D K+ I + +
Sbjct: 120 GTLKSTKFIALLENYEGEALFYVQPCIGLVELIERGE----ISIDSTKRLIHSYLLPLKK 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
DVIVL CTHY I + V +D ++A A L
Sbjct: 176 NGVDVIVLGCTHYVFIKEIIEDYFSGTVTVIDTGLAVALHAERTLKE 222
>gi|169350167|ref|ZP_02867105.1| hypothetical protein CLOSPI_00911 [Clostridium spiroforme DSM 1552]
gi|169292950|gb|EDS75083.1| hypothetical protein CLOSPI_00911 [Clostridium spiroforme DSM 1552]
Length = 261
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 58/249 (23%), Positives = 112/249 (44%), Gaps = 8/249 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I +FDSG+GGL VL ++ L+P + IY+ D+ PYG+ L K +
Sbjct: 1 MERAIGVFDSGVGGLTVLNSIKSLLPNENIIYIGDNYHCPYGDKTPAQLFKYASGIVEYF 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ K L V+ACNT + + + L+ T+P + +G + A + I++T AT
Sbjct: 61 I-KQNVKLIVLACNTTSSTVLERLQMTYPEVMIIGVIDATVNDFINRKVANTLIIATVAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ I S+ +++ L VE I + + E + R
Sbjct: 120 IKSNKYPETIKQIDSKIETFSLATPKLVPLVESGKYKEGIYD-----ILHEYLDEYKE-R 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
I+L CTHYP++ + P ++++ +S++I++ + +L R ++
Sbjct: 174 IQSIILGCTHYPILKEQIENVLP-NIEYVSSSEAISKSVKDILLRKKLLNFNKCSYTKIY 232
Query: 252 LSGKPDIAM 260
+G D +
Sbjct: 233 TTGDVDEFI 241
>gi|152993509|ref|YP_001359230.1| glutamate racemase [Sulfurovum sp. NBC37-1]
gi|189030376|sp|A6QBL4|MURI_SULNB RecName: Full=Glutamate racemase
gi|151425370|dbj|BAF72873.1| glutamate racemase [Sulfurovum sp. NBC37-1]
Length = 265
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 66/245 (26%), Positives = 113/245 (46%), Gaps = 7/245 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ +FDSG+GGL V+Q + ++ YVAD PYG + + + + + LD++
Sbjct: 3 VGVFDSGLGGLTVVQALSRVIKGADIFYVADTKHAPYGEKTPEQILQYSLNITAYFLDEH 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
Q + +IACNTA + LR +P + +G P IK A T++ I +L+TPATL
Sbjct: 63 QIDVLIIACNTATSAAVKTLRERYPELIIIGTEPGIKPALEQTRTKNIGVLATPATLVGE 122
Query: 136 YTSNLIHSYVSQCHI--HLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+L++ ++ + + + L ++E D +EG D
Sbjct: 123 KYQDLVNVLSAKEEVTLYEQACPGLVEQIENGEIESGKTHD----MLEGWLHPMRENDVD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
IVL CTHYPL+ H ++ ++ + D+IA+R L ++ R + +
Sbjct: 179 TIVLGCTHYPLVAHKIEEIMKREMNLIHTGDAIAKRLLALAEEKG-YENRGKFSLCIMST 237
Query: 254 GKPDI 258
K D
Sbjct: 238 AKIDQ 242
>gi|325125275|gb|ADY84605.1| Glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus
2038]
Length = 261
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 59/244 (24%), Positives = 100/244 (40%), Gaps = 6/244 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG GGL VL ++ L+P +++ D PYG + + + +++
Sbjct: 7 DRPIGVFDSGQGGLTVLSRLVDLIPNEDYVFYGDSANAPYGVKSKEEVYQLAKRVVDELI 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
DK+Q +IACNTA + D LR + S+ +G PA+K AA + ++TP TL
Sbjct: 67 DKHQVKAVMIACNTATSAAADRLRREY-SLPIIGIEPAVKPAAEENPGRQVVAMATPLTL 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + V + L +E+ I + +E GK
Sbjct: 126 EQDKFNQLVAECAEPGQVVKVPAPKLVELIEKGQT----DSPAIYQYLEELLAPYVGKAA 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
+VL CTH+P +++ D + A + L + LF
Sbjct: 182 -GVVLGCTHFPFAKQAIQEILGPQAKVYDGAIGAAAEVKRQLASRDELNASSQPGQILFE 240
Query: 253 SGKP 256
+ P
Sbjct: 241 NSAP 244
>gi|296186868|ref|ZP_06855269.1| glutamate racemase [Clostridium carboxidivorans P7]
gi|296048582|gb|EFG88015.1| glutamate racemase [Clostridium carboxidivorans P7]
Length = 259
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 68/256 (26%), Positives = 114/256 (44%), Gaps = 7/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I FDSG+GG+ VL++ L+P F+Y D PYG RL F + L
Sbjct: 6 RPIGFFDSGVGGISVLKEAVKLLPGEDFVYFGDSNNAPYGIKTVEE-ASRLTFEAVEFLI 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSM-AFLGAVPAIKQAAAYTQSGLISILSTPATL 132
VIACNTA + +LR + S+ +G PA+K A + G I +++TP TL
Sbjct: 65 SKNIKAVVIACNTATSAAIIDLRKKYSSVMPVIGIEPALKPAVELKRKGQIVVMATPMTL 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+NL++ Y +Q ++ + L +E+ ++ +E++K + + +
Sbjct: 125 AERKFNNLMNRYKNQAQMYPMPCPGLVELIEQGM----VEGEEVEKYLRDKIEPLKEEGI 180
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHALF 251
IVL CTHYP I +L V +D S ++ + L + N + R ++
Sbjct: 181 AAIVLGCTHYPFIKKTLSKLLNNEVPIIDGSLGTVKQLKRELIKSNLASKKREGGKVTVY 240
Query: 252 LSGKPDIAMRRLMQGF 267
S D ++ +
Sbjct: 241 NSLDSDEIIKLSYKLL 256
>gi|91216701|ref|ZP_01253666.1| glutamate racemase [Psychroflexus torquis ATCC 700755]
gi|91185170|gb|EAS71548.1| glutamate racemase [Psychroflexus torquis ATCC 700755]
Length = 262
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 64/256 (25%), Positives = 120/256 (46%), Gaps = 7/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ +++FDSG+GG +L+++ L+P + +Y+AD PYG + + +
Sbjct: 3 KHPVVLFDSGVGGTSLLKEIIHLLPHENIVYLADSKNAPYGLRTSQDIIALSIKNTELAI 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + V+ACNTA T LRS + S+ F+G PAIK AA +++ I +L+T TL
Sbjct: 63 QL-KAKMIVVACNTATTNAISFLRSNY-SLPFIGIEPAIKPAALNSKAKRIGVLATKGTL 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
S+ ++ V + VE G ++ + +
Sbjct: 121 SSELFKQTSESFTEGVNVIEVIGKGIVEAVE----GGWTNDERFINNLNQQIQPFIKEDI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALF 251
D +VL CTH+P I+ R+L P V +D+ ++A++ + +L + T F D ++
Sbjct: 177 DYLVLGCTHFPYIIPKLRELLPKHVTLIDSGRAVAKQTKAILREKHLKNTDDSFGDINIY 236
Query: 252 LSGKPDIAMRRLMQGF 267
+ ++ LM+ +
Sbjct: 237 TNTVNSSHLQELMKDY 252
>gi|150018421|ref|YP_001310675.1| glutamate racemase [Clostridium beijerinckii NCIMB 8052]
gi|149904886|gb|ABR35719.1| glutamate racemase [Clostridium beijerinckii NCIMB 8052]
Length = 267
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 63/242 (26%), Positives = 105/242 (43%), Gaps = 9/242 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I FDSGIGG+ VL ++P +IY AD PYG +KK ++ + +
Sbjct: 2 KIGFFDSGIGGITVLYDTLKVLPNEDYIYYADTSNVPYGPKPKDEVKKYILNAID-FIVE 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--STPATL 132
VIACNTA ++ + LRS + S+ +G PA+K A + +L +T TL
Sbjct: 61 QGVKAVVIACNTATSVAIEALRSKY-SIPIIGMEPAVKPAIEKNKDMNKRVLVTATALTL 119
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ NLI+ ++ + L+ L E E + ++ + +
Sbjct: 120 KEEKLHNLIYKLDNEHVVDLLPLPGLVQFSERLE----FDEQIVLPYLKEELFKFDLNNY 175
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
+ IVL CTH+ + R+L P V +D + A+ + +L +N + +
Sbjct: 176 EAIVLGCTHFSYYKDMVRKLVPSNVSIIDGNIGTAKNLKRILKEMNLLN-EGHGNITFYN 234
Query: 253 SG 254
SG
Sbjct: 235 SG 236
>gi|294791442|ref|ZP_06756599.1| glutamate racemase [Scardovia inopinata F0304]
gi|294457913|gb|EFG26267.1| glutamate racemase [Scardovia inopinata F0304]
Length = 263
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 66/261 (25%), Positives = 101/261 (38%), Gaps = 10/261 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I +FDSG+GG+ V++++R +P ++ D PYG +K+ F +
Sbjct: 2 NNAPIGVFDSGMGGISVVRQIRQDLPHEDILFYGDSAHAPYGTKPTEQVKELS-FAVTRH 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTP 129
L VIACNTA + +LRS+ S+ +G PA+K A + + +L+T
Sbjct: 61 LLSRGVKAIVIACNTATSAAAPDLRSSL-SLPVIGMEPALKVACDRGEGKPQNVLVLATS 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
TLR + L+ IH + L S VE G D K I +
Sbjct: 120 LTLREKKFARLVEQVRGNNTIHTQACPDLVSLVE---SGKVEDRDLAIKTITSYLKPYDL 176
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV---FD 246
D +VL CTH+ + FRQ+ P V +D + + R +L R
Sbjct: 177 NSLDSVVLGCTHFIFYRNYFRQILPDSVAIIDGNAGTSHHVRTILEESGNLADRPDNYQG 236
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
L S
Sbjct: 237 QVTLENSQNTKELDLLARHLL 257
>gi|313123221|ref|YP_004033480.1| glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus
ND02]
gi|312279784|gb|ADQ60503.1| Glutamate racemase [Lactobacillus delbrueckii subsp. bulgaricus
ND02]
Length = 261
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 60/244 (24%), Positives = 100/244 (40%), Gaps = 6/244 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG GGL VL ++ LMP +++ D PYG + + + +++
Sbjct: 7 DRPIGVFDSGQGGLTVLSRLVDLMPNEDYVFYGDSANAPYGVKSKKEVYQLAKRVVDELI 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
DK+Q +IACNTA + D LR + S+ +G PA+K AA + ++TP TL
Sbjct: 67 DKHQVKAVMIACNTATSAAADRLRREY-SLPIIGIEPAVKPAAEENPGRQVVAMATPLTL 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + V + L +E+ I + +E GK
Sbjct: 126 EQDKFNQLVAECAEPGQVLKVPAPKLVELIEKGQT----DSPAIYQYLEELLAPYVGKAA 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
+VL CTH+P +++ D + A + L + LF
Sbjct: 182 -GVVLGCTHFPFAKQAIQEILGPQAKVYDGAIGAAAEVKRQLASRDELNASSQPGQILFE 240
Query: 253 SGKP 256
+ P
Sbjct: 241 NSAP 244
>gi|255524010|ref|ZP_05390972.1| glutamate racemase [Clostridium carboxidivorans P7]
gi|255512297|gb|EET88575.1| glutamate racemase [Clostridium carboxidivorans P7]
Length = 257
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 68/256 (26%), Positives = 114/256 (44%), Gaps = 7/256 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I FDSG+GG+ VL++ L+P F+Y D PYG RL F + L
Sbjct: 4 RPIGFFDSGVGGISVLKEAVKLLPGEDFVYFGDSNNAPYGIKTVEE-ASRLTFEAVEFLI 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSM-AFLGAVPAIKQAAAYTQSGLISILSTPATL 132
VIACNTA + +LR + S+ +G PA+K A + G I +++TP TL
Sbjct: 63 SKNIKAVVIACNTATSAAIIDLRKKYSSVMPVIGIEPALKPAVELKRKGQIVVMATPMTL 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+NL++ Y +Q ++ + L +E+ ++ +E++K + + +
Sbjct: 123 AERKFNNLMNRYKNQAQMYPMPCPGLVELIEQGM----VEGEEVEKYLRDKIEPLKEEGI 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHALF 251
IVL CTHYP I +L V +D S ++ + L + N + R ++
Sbjct: 179 AAIVLGCTHYPFIKKTLSKLLNNEVPIIDGSLGTVKQLKRELIKSNLASKKREGGKVTVY 238
Query: 252 LSGKPDIAMRRLMQGF 267
S D ++ +
Sbjct: 239 NSLDSDEIIKLSYKLL 254
>gi|182420059|ref|ZP_02951293.1| glutamate racemase [Clostridium butyricum 5521]
gi|237669542|ref|ZP_04529522.1| glutamate racemase [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182376096|gb|EDT73683.1| glutamate racemase [Clostridium butyricum 5521]
gi|237654986|gb|EEP52546.1| glutamate racemase [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 256
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 66/244 (27%), Positives = 105/244 (43%), Gaps = 7/244 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I FDSG+GGL VL++ +MP ++IY D PYG E + K L F D L
Sbjct: 5 NSPIGFFDSGVGGLSVLKEAISIMPNENYIYFGDSKNAPYGTKELDEV-KHLTFNAVDFL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA + +E+R+ + +G PA+K A ++G I I++TP TL
Sbjct: 64 REKNVKAIVVACNTATSAAIEEIRNKHNDIPIIGIEPALKPAVKLKRNGKIIIMATPMTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R L+ Y +I + L +E E +K + + F
Sbjct: 124 REKKFKQLMVKYQEGSNIVPMPCAGLVEFIENGILEGDELEKYLKNKFDIYFD-----DI 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251
IVL CTHYP I ++ + +D + + L T ++ + ++
Sbjct: 179 AAIVLGCTHYPFIKETLAKVVGSEIPLIDGGAGTSHELQRKLEEKGTISVSKNIGNVEIY 238
Query: 252 LSGK 255
S
Sbjct: 239 NSTN 242
>gi|7387915|sp|P56868|MURI_AQUPY RecName: Full=Glutamate racemase
gi|6707573|gb|AAF25672.1|AF212972_1 glutamate racemase [Aquifex pyrophilus]
Length = 254
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 57/254 (22%), Positives = 103/254 (40%), Gaps = 15/254 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL VL+ +R + +Y+ D PYG + + + L
Sbjct: 2 KIGIFDSGVGGLTVLKAIRNRYRKVDIVYLGDTARVPYGIRSKDTIIRYSLECAG-FLKD 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ V+ACNTA + L+ F P +K+A +++ I ++ TPAT++
Sbjct: 61 KGVDIIVVACNTASAYALERLKKEINVPVFGVIEPGVKEALKKSRNKKIGVIGTPATVKS 120
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + + + + EE + +K +E E +GK D
Sbjct: 121 GAYQRKLEEGGAD--VFAKACPLFVPLAEEGLLEG----EITRKVVEHYLKEFKGK-IDT 173
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
++L CTHYPL+ ++ V+ +D+S++++ L N + LF +
Sbjct: 174 LILGCTHYPLLKKEIKKFLG-DVEVVDSSEALS------LSLHNFIKDDGSSSLELFFTD 226
Query: 255 KPDIAMRRLMQGFG 268
+ G
Sbjct: 227 LSPNLQFLIKLILG 240
>gi|303233055|ref|ZP_07319730.1| glutamate racemase [Atopobium vaginae PB189-T1-4]
gi|302480830|gb|EFL43915.1| glutamate racemase [Atopobium vaginae PB189-T1-4]
Length = 261
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 69/258 (26%), Positives = 110/258 (42%), Gaps = 10/258 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GG+ VL+++ LMP +F+Y+ D PYG+ + R + ++ L
Sbjct: 5 RAPIGVFDSGVGGISVLKRLVELMPHENFVYMGDSAYNPYGSKTKQQIIDRSCTIVNE-L 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ VIACNTA + D LR FP + +G PA+K A + ++ + +L+TPATL
Sbjct: 64 LAHSIKALVIACNTATSAASDYLRVQFPELPIIGIEPALKAALDHPKTMPVLVLATPATL 123
Query: 133 RRTYTSNLIHSYVSQC---HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
L H Q ++ + LA R+E+ ++ ++
Sbjct: 124 TLEKYQELEHKLGVQRNTSQVYRLGCKGLAHRIEQGNLNADDLMQDLHTLLDEY-----R 178
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+ +VL CTHYP + + V D + AR +L
Sbjct: 179 GVVNSVVLGCTHYPFVKQHICDILG-DVPCYDGAIGTARHCLSVLSARGLLNPSEDAGTI 237
Query: 250 LFLSGKPDIAMRRLMQGF 267
FLS P A Q F
Sbjct: 238 EFLSSTPGAAQIAFYQSF 255
>gi|89256134|ref|YP_513496.1| glutamate racemase [Francisella tularensis subsp. holarctica LVS]
gi|115314607|ref|YP_763330.1| glutamate racemase [Francisella tularensis subsp. holarctica OSU18]
gi|156502156|ref|YP_001428221.1| glutamate racemase [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|167009837|ref|ZP_02274768.1| glutamate racemase [Francisella tularensis subsp. holarctica
FSC200]
gi|290953270|ref|ZP_06557891.1| glutamate racemase [Francisella tularensis subsp. holarctica URFT1]
gi|295313512|ref|ZP_06804107.1| glutamate racemase [Francisella tularensis subsp. holarctica URFT1]
gi|89143965|emb|CAJ79186.1| glutamate racemase [Francisella tularensis subsp. holarctica LVS]
gi|115129506|gb|ABI82693.1| glutamate racemase [Francisella tularensis subsp. holarctica OSU18]
gi|156252759|gb|ABU61265.1| glutamate racemase [Francisella tularensis subsp. holarctica
FTNF002-00]
Length = 265
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 53/256 (20%), Positives = 98/256 (38%), Gaps = 10/256 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSGIGGL +++ + ++P IY D PYG ++K + L
Sbjct: 4 NRPIGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQKFAVQTA-KFL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ +IACNT + KD ++ ++ + + A + + +++TPAT+
Sbjct: 63 IDQEVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAGVSLVDNLNT--VGVIATPATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IH ++ + S +EE I E K+ K
Sbjct: 121 NSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGHIVELVAKE----YLSYFHDKNI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251
++L CTHYP+I ++ V +D S ++ LL T+ ++ +
Sbjct: 177 QTLILGCTHYPIIKESIAKIL--DVKLIDPSLQASKMLYSLLFENKLLNTTKSNPEYRFY 234
Query: 252 LSGKPDIAMRRLMQGF 267
++ P
Sbjct: 235 VTDIPLKFRSVGEMFL 250
>gi|315606165|ref|ZP_07881193.1| glutamate racemase [Actinomyces sp. oral taxon 180 str. F0310]
gi|315312123|gb|EFU60212.1| glutamate racemase [Actinomyces sp. oral taxon 180 str. F0310]
Length = 276
Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 55/265 (20%), Positives = 96/265 (36%), Gaps = 14/265 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I IFDSG+GGL V + + +P+ IY+ D PYG+ ++ + +
Sbjct: 2 NNAPIGIFDSGLGGLTVARAVIDKLPDEEIIYLGDTEHTPYGSRAIAQVRSLTLSALDE- 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTF----PSMAFLGAVPAIKQAAAYTQSGLISILS 127
L VIACNTA + R + PA +Q+ + T++ + ++
Sbjct: 61 LASRGVKALVIACNTATAAALADARERYWIDAGIPVIEVITPAARQSVSATRNRHVGVIG 120
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT++ + + + + VE DEI+
Sbjct: 121 TKATIQSEAYLRALAAV-PGLRVTQQACPAFVDFVEAGVT----TGDEIEAVATEYLTPL 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT----R 243
+ D ++L CTHYPL+ V ++ V + +S++ A L
Sbjct: 176 KAAGVDTLILGCTHYPLLTGVISRVMGDGVTLVTSSEATANMTYNELVDRALLHDPWSEG 235
Query: 244 VFDDHALFLSGKPDIAMRRLMQGFG 268
+H +G D + G
Sbjct: 236 ARPEHQFLATGASDAFPLLARRFLG 260
>gi|319427429|gb|ADV55503.1| glutamate racemase [Shewanella putrefaciens 200]
Length = 270
Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 82/252 (32%), Positives = 132/252 (52%), Gaps = 2/252 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +SIL+FDSG GGL V +++ +P YV+D FPYG LKKR++ + S
Sbjct: 1 MDSSILVFDSGSGGLTVAAEIKKRIPNIRLSYVSDAGFFPYGKKPHDILKKRILEVISKA 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
QP + VIACNTA T+ D LR+ ++ +G VPAIK AA+ ++S ++ +L T T
Sbjct: 61 NSLTQPDIIVIACNTASTIALDLLRAEL-NIPIVGVVPAIKPAASLSKSKVVMVLGTHTT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ Y LI ++ ++C + + S +L E+ G + + +E++ F + +
Sbjct: 120 VNSAYVKMLITNFATECKVLIEDSEVLVLASEQKLLGNGFDPNIVTQEVQRIFSKPDAFN 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHAL 250
TDV+VLACTH+PLI + P V +D+ +IA R LL T + +
Sbjct: 180 TDVLVLACTHFPLINAEIKNALPHHVTVIDSGLAIANRTHSLLKIEHQTCSPILDPEITF 239
Query: 251 FLSGKPDIAMRR 262
+ +G D +
Sbjct: 240 YTTGNVDSEQAK 251
>gi|282849105|ref|ZP_06258490.1| glutamate racemase [Veillonella parvula ATCC 17745]
gi|282580809|gb|EFB86207.1| glutamate racemase [Veillonella parvula ATCC 17745]
Length = 267
Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 57/256 (22%), Positives = 107/256 (41%), Gaps = 7/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL VL+ ++ P FIY+ D+ P GN D + + L
Sbjct: 6 QLPIGVFDSGVGGLSVLKVLQEQFPNEDFIYIGDNANNPVGNRSDDEITYLACRIAE-TL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+K L VIACNT + D +R S+ +G +K A ++S I I++T AT+
Sbjct: 65 EKQPVKLMVIACNTFTVVALDAVRELV-SVPVIGVSQGVKTAINKSKSKTIGIMATVATV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
++ + + LA +E+ + + +++ + +
Sbjct: 124 NSHIHKHVALEVDHEVLVWEQPCPELAGLIEQ----GHLDDYFVREICKEYLEPLLSREI 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALF 251
+V+VL CTH+P + + +L+ + ++D + + R L N + L+
Sbjct: 180 EVVVLGCTHFPFVQPLLEELTSGRIRFIDPAFETSELVRHRLESKNLFNPQDTVGTVTLY 239
Query: 252 LSGKPDIAMRRLMQGF 267
+ ++
Sbjct: 240 FTKDVELGDALSASFL 255
>gi|120555141|ref|YP_959492.1| glutamate racemase [Marinobacter aquaeolei VT8]
gi|120324990|gb|ABM19305.1| glutamate racemase [Marinobacter aquaeolei VT8]
Length = 281
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 69/237 (29%), Positives = 116/237 (48%), Gaps = 5/237 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L+FDSG+GGL V + +P +Y+AD+ GFPYG+ + + +R L L
Sbjct: 5 RPRVLVFDSGVGGLSVAACIHQTLPGAELVYLADNAGFPYGDKPEQVVIERCCTLIRQCL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + V+ACNTA T++ ELR+ A+K AAA + + I +L+TPAT+
Sbjct: 65 AQFPCDVVVVACNTASTVVLPELRANIAVPVVGVVP-AVKPAAACSVNRRIGLLATPATV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R Y +LI + C + + L EE G + E+ +G +
Sbjct: 124 KRAYLDDLIQKFARDCEVVRLGHPALVRWAEELVGGSAPDQVEV----DGAMVPLREAGV 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D +VL CTHYPL++ R+ P + W+++ ++IARR + +
Sbjct: 180 DTVVLGCTHYPLLLPWLRKALPEVMHWVESGEAIARRVAWWFEQAGDLACAQTPPNH 236
>gi|294634282|ref|ZP_06712824.1| glutamate racemase [Edwardsiella tarda ATCC 23685]
gi|291092322|gb|EFE24883.1| glutamate racemase [Edwardsiella tarda ATCC 23685]
Length = 260
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 77/236 (32%), Positives = 125/236 (52%), Gaps = 3/236 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V Q+++ L+P+ H+IY D+ GFPYG E + +R++ + I ++
Sbjct: 2 LVFDSGVGGLSVYQEIQALLPDLHYIYAFDNQGFPYGEKEAAFITERVLLIVEAIQRRHT 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACNTA T++ LR F S +G VPAIK AA T++G++ +L+T AT++R Y
Sbjct: 62 LSAMVVACNTASTIVLPALRERF-SFPVVGVVPAIKPAAKLTRNGIVGLLATRATVQRAY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T L+ + + C I ++ S L E G ++ ++ + + D +V
Sbjct: 121 THELVARFAADCQIKMLGSAELVEIAEAKLHGEAVELQRLRAILRPWLTM--AEPPDTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
L CTH+PL+ Q+ P +D+ +IARR L+ T + A
Sbjct: 179 LGCTHFPLLRAELAQVLPVGTRMVDSGAAIARRVAWLIANQPTLTGTDRRNVAYAT 234
>gi|220920402|ref|YP_002495703.1| glutamate racemase [Methylobacterium nodulans ORS 2060]
gi|219945008|gb|ACL55400.1| glutamate racemase [Methylobacterium nodulans ORS 2060]
Length = 312
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 106/263 (40%), Positives = 154/263 (58%), Gaps = 7/263 (2%)
Query: 12 LQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
++ +L+FDSG+GGL VL ++R P+ +Y ADD FPYG+ + AL R++ +
Sbjct: 39 MRAPAVLVFDSGLGGLTVLAEVRRARPDARVVYAADDAAFPYGDLSEPALVARVVAVMER 98
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ + P L V+ACNTA TL+ LR+ F ++ F+G VPAIK AAA T+SGLIS+L+TP
Sbjct: 99 LIALHAPDLVVVACNTATTLVLPALRARF-AIPFVGTVPAIKPAAAATRSGLISVLATPG 157
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+RR YT LI +Y + LV + LA+ E G + +D +++EI CF+
Sbjct: 158 TVRRDYTRELIDAYAGAYAVTLVGATRLAAFAEAELAGTPVGDDLLREEIAPCFVGAGES 217
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL--PRINTHQTRVFDDH 248
RTDV+VL CTHYPL++ F +L PWPV W+D + +IARR LL
Sbjct: 218 RTDVVVLGCTHYPLLLRRFERLVPWPVTWIDPAPAIARRMAQLLGPAPHPAPPEDAAPVA 277
Query: 249 ALFLSGK---PDIAMRRLMQGFG 268
A+F G+ P + +G G
Sbjct: 278 AVFTGGERITPSLRDALAARGMG 300
>gi|150014924|ref|YP_001307178.1| glutamate racemase [Clostridium beijerinckii NCIMB 8052]
gi|149901389|gb|ABR32222.1| glutamate racemase [Clostridium beijerinckii NCIMB 8052]
Length = 284
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 63/246 (25%), Positives = 109/246 (44%), Gaps = 6/246 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I FDSG+GGL V+++ +MP +FIY D PYG + ++ + +L
Sbjct: 31 DPIGFFDSGVGGLSVMREAISIMPNENFIYFGDSKNAPYGIKKVIEVRDLTIDAVEFLLS 90
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
K VIACNTA + +E+RS + ++ +G PA+K A + G I I++TP TLR
Sbjct: 91 K-NVKAVVIACNTATSAAIEEIRSKYKQISIIGIEPALKPAVKLNRKGQIIIMATPMTLR 149
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
L+ Y ++ I + L +E+ ++ ++++ ++ F
Sbjct: 150 EKKFKLLMDKYKNEADIISLPCAGLVEFIEQGI----VEGEDLEYYLKEKFKGYLDNDIS 205
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALFL 252
IVL CTHYP I + + +D A+ + L ++ + +
Sbjct: 206 SIVLGCTHYPFIKKALSNVIGKEIPLIDGGFGTAQELKRKLIESGLLNDSKEKGNIEICN 265
Query: 253 SGKPDI 258
S D
Sbjct: 266 SINDDK 271
>gi|284047416|ref|YP_003397755.1| glutamate racemase [Acidaminococcus fermentans DSM 20731]
gi|283951637|gb|ADB46440.1| glutamate racemase [Acidaminococcus fermentans DSM 20731]
Length = 264
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 50/258 (19%), Positives = 99/258 (38%), Gaps = 8/258 (3%)
Query: 12 LQN--SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ I + DSG+GGL VL+ ++ MP FI++ D PYGN ++ + +
Sbjct: 1 MNRLDPIGVIDSGVGGLTVLKWLQEKMPHERFIFIGDTARTPYGNRSREEIQGFVGE-MT 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L++ V+ACNT L D +++ + + +G T++ + L+T
Sbjct: 60 AWLNRRNIKQLVVACNTITVLGTDVIKNGY-DFSVIGMKKGAHMVEGVTRNKKVGFLATD 118
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ I + + +E G + E+ I+ + +
Sbjct: 119 FTVASGAHKKEIQEMDPEIQVFGQGCPKFVPLIE----GEQFGSPELAAAIKEYTDKLKE 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D ++L+CTHYP + R+ V LD ++ + A L + ++
Sbjct: 175 YDVDTVMLSCTHYPFVEKEIREAFGPGVTILDPAERTVQAAMEDLKQRRLNRETGLGRAE 234
Query: 250 LFLSGKPDIAMRRLMQGF 267
+ + + R +
Sbjct: 235 VCFTADLERGKRLAARML 252
>gi|291458619|ref|ZP_06598009.1| glutamate racemase [Oribacterium sp. oral taxon 078 str. F0262]
gi|291419152|gb|EFE92871.1| glutamate racemase [Oribacterium sp. oral taxon 078 str. F0262]
Length = 279
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 61/259 (23%), Positives = 100/259 (38%), Gaps = 7/259 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I IFDSG+GG+ V++ ++ +P I+ D PYG ++ L
Sbjct: 19 RAPIGIFDSGVGGISVVKALKRELPGEDLIFFGDSKNAPYGEKSVEEIRALS-ERSYQFL 77
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY--TQSGLISILSTPA 130
+ VIACNTA + + LR P +G PA+K A + I +L+T +
Sbjct: 78 RGQRVKAVVIACNTATSAAAELLREENPGEIIVGMEPALKPAIENAGRERPEILVLATSS 137
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TL L +H + + + VE +++ + +G
Sbjct: 138 TLGGERFHKLAARLGMGARVHSLPAPEIVRMVEAGREDSDEMRSYLRELLRPYRRMADGT 197
Query: 191 ---RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
D +VL CTH+P R++ +PV D ++ AR + L + R
Sbjct: 198 IRCPLDGLVLGCTHFPFAKRAIREVLSYPVPIYDGAEGTARETKHRLLQKALLSDRKSGG 257
Query: 248 HALFLSGKPD-IAMRRLMQ 265
S PD RL+
Sbjct: 258 CVRLYSSLPDTELEERLLN 276
>gi|332678480|gb|AEE87609.1| Glutamate racemase [Francisella cf. novicida Fx1]
Length = 265
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 50/256 (19%), Positives = 98/256 (38%), Gaps = 10/256 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSGIGGL +++ + ++P IY D PYG ++K L
Sbjct: 4 NRPIGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQKFAAQTA-KFL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + +IACNT + KD ++ ++ + + A + + +++TPAT+
Sbjct: 63 IEQEVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAGVSLVDNLNT--VGVIATPATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IH ++ + S +E + + ++ + K
Sbjct: 121 NSNAYALQIHKKNPNIEVYSNPCGLFVSMIE----EGFVSGEIVELVAKEYLSYFHDKNI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251
+VL CTHYP+I ++ V +D S ++ LL T+ ++ +
Sbjct: 177 QALVLGCTHYPIIKESIAKIL--DVKLIDPSLQASKMLYSLLFENKLLNTTKSNPEYRFY 234
Query: 252 LSGKPDIAMRRLMQGF 267
++ P
Sbjct: 235 VTDIPLKFRSVGEMFL 250
>gi|312132407|ref|YP_003999746.1| muri [Bifidobacterium longum subsp. longum BBMN68]
gi|311772761|gb|ADQ02249.1| MurI [Bifidobacterium longum subsp. longum BBMN68]
Length = 264
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 59/266 (22%), Positives = 102/266 (38%), Gaps = 13/266 (4%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I +FDSG+GG+ V +++ MP H +Y D PYG ++ +
Sbjct: 1 MSSSAPIGVFDSGLGGISVARQIAKDMPAEHVLYFGDSANAPYGIKTPEQVRALSFDIVE 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--------YTQSG 121
+ + IACNTA + ++LR + + +G PA+K A +
Sbjct: 61 RFV-RQGVKAVAIACNTATSAAVNDLREHY-DIPIIGMEPALKVACDRGDVPSDPHHIPQ 118
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ + +TP TLR + L+ + S I L VE G D + + +
Sbjct: 119 RVIVAATPLTLRERKFAKLMDRFDSNNTIFKEPCPDLVEIVESGRLG---DHDLVMRTLH 175
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
G F + + + D +VL CTH+ FR+L P +D ++ R +L +
Sbjct: 176 GYFDQYDMEHIDSVVLGCTHFVFYRDYFRELLPERAAVIDGNEGTVRHLGVVLESLGKLA 235
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ P + L +
Sbjct: 236 PEDATGGVELANSDPSERIAELSRKL 261
>gi|319948539|ref|ZP_08022670.1| glutamate racemase [Dietzia cinnamea P4]
gi|319437786|gb|EFV92775.1| glutamate racemase [Dietzia cinnamea P4]
Length = 293
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 51/245 (20%), Positives = 93/245 (37%), Gaps = 9/245 (3%)
Query: 27 IVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNT 86
V + + +P+ +YV D PYG ++ + + L VIACNT
Sbjct: 43 TVARAIVDQLPDESVVYVGDTAHGPYGPLPLAQVRAHALAVADQ-LVDRGVKALVIACNT 101
Query: 87 AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVS 146
A + + R +P PA ++A A T+SG I +++T AT+ + + +
Sbjct: 102 ASAAMLRDARERYPVPVVEVIQPAARRAVATTRSGRIGVIATRATVASRAYDDA-VAAAA 160
Query: 147 QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIV 206
+ V+ VE + ++ E D +VL CTHYPL+
Sbjct: 161 GIELTSVACPKFVEFVERGITSGR----QVLGLAEAYLAPIRDADVDTLVLGCTHYPLLS 216
Query: 207 HVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR---VFDDHALFLSGKPDIAMRRL 263
V + + V + +++ A+ +L + + ++G PD R
Sbjct: 217 GVVQLAAGDHVTLVSSAEETAKDVLRVLTAEDLLRPHDPADPPTREYLVTGDPDAFRRVA 276
Query: 264 MQGFG 268
+ G
Sbjct: 277 SRFLG 281
>gi|225175994|ref|ZP_03729986.1| glutamate racemase [Dethiobacter alkaliphilus AHT 1]
gi|225168582|gb|EEG77384.1| glutamate racemase [Dethiobacter alkaliphilus AHT 1]
Length = 267
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 55/245 (22%), Positives = 98/245 (40%), Gaps = 11/245 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I FDSG GGL VL +P F+Y D PYG+ ++ + +++L
Sbjct: 8 DKPIGFFDSGAGGLTVLASAVKCLPNESFLYFGDTAHAPYGSRPVEDVRNLSVQ-AAEML 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA + LR P + +G PA+K A A G + +++TP TL
Sbjct: 67 CRQGCKALVVACNTATSAAVHVLREMLP-IPVIGMEPAVKPALA--GGGKVLVMATPLTL 123
Query: 133 RRTYTSNLIHSYVSQC-HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ L + ++ ++ L VE +++ + F +
Sbjct: 124 KEEKFKALCDRCGADESNVIVLPCPGLVEMVERGETEG----PAVERALAQLFAGADLTG 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHA 249
+VL CTHY + + P V ++D + ++ +L + + +
Sbjct: 180 VSAVVLGCTHYLFLRRALAGILPADVKFVDGNLGTVKQLARILKKEGLLREEKTSQTNVE 239
Query: 250 LFLSG 254
+ SG
Sbjct: 240 ILSSG 244
>gi|120597779|ref|YP_962353.1| glutamate racemase [Shewanella sp. W3-18-1]
gi|120557872|gb|ABM23799.1| glutamate racemase [Shewanella sp. W3-18-1]
Length = 270
Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 84/252 (33%), Positives = 131/252 (51%), Gaps = 2/252 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +SIL+FDSG GGL V +++ +P YV+D FPYG LKKR++ + S
Sbjct: 1 MDSSILVFDSGSGGLTVAAEIKKRIPNIRLSYVSDAGFFPYGKKPHDILKKRILDVISKA 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
QP + VIACNTA T+ D LR+ ++ +G VPAIK AA+ ++S ++ +L T T
Sbjct: 61 SSLTQPDIIVIACNTASTIALDLLRAEL-NIPIVGVVPAIKPAASLSKSKVVMVLGTHTT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ Y LI ++ ++C + + S L E+ G D + +EI+ F + +
Sbjct: 120 VNSAYVKMLITNFATECKVLVEDSEALVLASEQKLLGNGFDPDIVTQEIQRIFSKPDAFN 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHAL 250
TDV+VLACTH+PLI + P V +D+ +IA R LL T + +
Sbjct: 180 TDVLVLACTHFPLINAEIKNALPHHVTVIDSGLAIANRTHSLLKIEHQTCSPILDPEITF 239
Query: 251 FLSGKPDIAMRR 262
+ +G D +
Sbjct: 240 YTTGNVDSEQAK 251
>gi|327403118|ref|YP_004343956.1| glutamate racemase [Fluviicola taffensis DSM 16823]
gi|327318626|gb|AEA43118.1| glutamate racemase [Fluviicola taffensis DSM 16823]
Length = 275
Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 53/258 (20%), Positives = 102/258 (39%), Gaps = 11/258 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL VL+++R +PEY F+Y+ D+ PYG+ + L
Sbjct: 6 PIGVFDSGYGGLTVLKEIREKLPEYDFLYLGDNARAPYGSRSFPVIYDYTWQAVQA-LFD 64
Query: 75 YQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ACNTA +L P LG + P+ ++ ++++ + +L+T
Sbjct: 65 RDCSLVILACNTASAKALRNIQRIKLPELHPDKRVLGVIRPSTEELDKHSKTKHVGVLAT 124
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+R + + ++ + + +E I++++ +
Sbjct: 125 DGTIRSNSYQIELAKFAPDLVVNQHACPMWVPLIENNKFDSPGGIYFIQEDLVQLLE--K 182
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFD 246
+ D I+LACTHYP+++ + L P ++ L +A L R +
Sbjct: 183 DPKIDTILLACTHYPILLDQIKGLLPEQIEVLPQGQIVANSLADYLDRHPEMAAKCSKGG 242
Query: 247 DHALFLSGKPDIAMRRLM 264
+ +
Sbjct: 243 KVNYLTTESAADFSEKAS 260
>gi|33862666|ref|NP_894226.1| putative aspartate and glutamate racemase:glutamate racemase
[Prochlorococcus marinus str. MIT 9313]
gi|33634582|emb|CAE20568.1| Putative aspartate and glutamate racemases:Glutamate racemase
[Prochlorococcus marinus str. MIT 9313]
Length = 268
Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 58/259 (22%), Positives = 99/259 (38%), Gaps = 10/259 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ + +FDSG+GGL VL+++ + +Y+ D PYGN H ++ +
Sbjct: 1 MKPRLGLFDSGVGGLTVLRRVLERHGQVPCLYLGDTARVPYGNRMPHEIRVIAKEVV-QW 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L Q V+ACNT L D + + V I+ AA + +L+TPA
Sbjct: 60 LRDQQVTAVVMACNTTNALASDVAEAVAGRIP---VVRLIEAAANMLSEERVGVLATPAA 116
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
I + +E ++ +E+ + +
Sbjct: 117 AASGAYGKQIEISRPGTMVIEQGCPAFVPLIET----GQLSSEELYQAAREYLNPLLAAQ 172
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL--PRINTHQTRVFDDHA 249
+ +VL CTHYPL+ + RQ+ P V +D + +AR LL P I +
Sbjct: 173 VEAVVLGCTHYPLLEPILRQILPQDVRLIDPAIGVARELDVLLGSPTIPLGTSLSLTSTR 232
Query: 250 LFLSGKPDIAMRRLMQGFG 268
++ P+ R G
Sbjct: 233 FCVTANPEGFATRATPWLG 251
>gi|238020101|ref|ZP_04600527.1| hypothetical protein VEIDISOL_01982 [Veillonella dispar ATCC 17748]
gi|237863625|gb|EEP64915.1| hypothetical protein VEIDISOL_01982 [Veillonella dispar ATCC 17748]
Length = 267
Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 108/256 (42%), Gaps = 7/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL VL+ ++ P FIY+ D+ P GN D + + L
Sbjct: 6 QLPIGVFDSGVGGLSVLKVLQEQFPNEDFIYIGDNANNPVGNRSDDEITYLACHIAEA-L 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+K L VIACNT + D +R S+ +G +K A + ++S I I++T AT+
Sbjct: 65 EKQPVKLMVIACNTFTVVALDAVRERV-SVPVIGVSQGVKTAISQSKSKTIGIMATVATV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
++ + + LA +E+ + + ++ +
Sbjct: 124 NSHIHKHVALEVDHEVLVWEQPCPELAGLIEQ----GHLDDHFVRDVCTEYLEPLLSREI 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALF 251
+V+VL CTH+P + + +L+ + ++D + + R L + + +L+
Sbjct: 180 EVVVLGCTHFPFVQPLLEELTSGRIQFIDPAFETSELVRRRLEGKDLFNPQKTAGTVSLY 239
Query: 252 LSGKPDIAMRRLMQGF 267
+ ++ +
Sbjct: 240 FTKDIELGDKLSASFL 255
>gi|254374574|ref|ZP_04990055.1| glutamate racemase [Francisella novicida GA99-3548]
gi|151572293|gb|EDN37947.1| glutamate racemase [Francisella novicida GA99-3548]
Length = 265
Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 50/256 (19%), Positives = 97/256 (37%), Gaps = 10/256 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSGIGGL +++ + ++P IY D PYG ++K L
Sbjct: 4 NRPIGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQKFAAQTA-KFL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + +IACNT + KD ++ ++ + + A + + +++TPAT+
Sbjct: 63 IEQEVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAGVSLVDNLNT--VGVIATPATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IH ++ + S +E + ++ + K
Sbjct: 121 NSNAYALQIHKKNPNIEVYSNPCGLFVSMIE----EGFVSGQIVELVAKEYLSYFHDKNI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251
+VL CTHYP+I ++ V +D S ++ LL T+ ++ +
Sbjct: 177 QALVLGCTHYPIIKESIAKIL--DVKLIDPSLQASKMLYSLLFENKLLNTTKSNPEYRFY 234
Query: 252 LSGKPDIAMRRLMQGF 267
++ P
Sbjct: 235 VTDIPLKFRSVGEMFL 250
>gi|124023594|ref|YP_001017901.1| aspartate and glutamate racemases:glutamate racemase
[Prochlorococcus marinus str. MIT 9303]
gi|123963880|gb|ABM78636.1| Putative aspartate and glutamate racemases:Glutamate racemase
[Prochlorococcus marinus str. MIT 9303]
Length = 268
Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 58/259 (22%), Positives = 99/259 (38%), Gaps = 10/259 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ + +FDSG+GGL VL+++ + +Y+ D PYGN H ++ +
Sbjct: 1 MKPRLGLFDSGLGGLTVLRRVLERHGQVSCLYLGDTARVPYGNRMPHEIRVIAKEVV-QW 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L Q V+ACNT L D + + V I+ AA + +L+TPA
Sbjct: 60 LRDQQVTAVVMACNTTNALASDVAEAVAGGIP---VVRLIEAAANMLSEARVGVLATPAA 116
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
I + +E ++ +E+ + +
Sbjct: 117 AASGAYGKQIEISRPGTMVIEQGCPAFVPLIET----GQLSSEELYQAAREYLNPLLAAQ 172
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL--PRINTHQTRVFDDHA 249
+ +VL CTHYPL+ + RQ+ P V +D + +AR LL P I +
Sbjct: 173 VEAVVLGCTHYPLLEPILRQILPQDVRLIDPAIGVARELDVLLGSPTIPLGTSLSLTSTR 232
Query: 250 LFLSGKPDIAMRRLMQGFG 268
++ P+ R G
Sbjct: 233 FCVTANPEGFATRATPWLG 251
>gi|119476761|ref|ZP_01617071.1| glutamate racemase [marine gamma proteobacterium HTCC2143]
gi|119450017|gb|EAW31253.1| glutamate racemase [marine gamma proteobacterium HTCC2143]
Length = 280
Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 91/259 (35%), Positives = 133/259 (51%), Gaps = 5/259 (1%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
IL+FDSG+GGL ++Q +R +P Y+AD++ FPYG +D L R + S +
Sbjct: 17 PHILVFDSGVGGLSIVQHIRLHVPHATITYLADNLFFPYGVLDDQTLLSRTCEIVSWAHN 76
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
YQP L V+ACN+A TL+ LR+ AIK AAA + + +I +L+TPAT++
Sbjct: 77 HYQPSLIVLACNSASTLVLPHLRAILGVPVVGVVP-AIKPAAAMSTTNVIGLLATPATIQ 135
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R YT LI + C + V S L VE G+K E+EIK + D
Sbjct: 136 RDYTDELIAEFAPHCEVIKVGSAALVDFVERKMAGLKPTENEIKHILSLFNQHPRWSSVD 195
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI-NTHQTRVFDDHALFL 252
+VLACTH+PL+ +P W+D+ D++ARR LL + + + LF
Sbjct: 196 TVVLACTHFPLVKRELSDAAPSIKHWVDSGDAVARRVTSLLTSLPGELSSGAAVNRILFT 255
Query: 253 --SGKPDIAMRRLMQGFGL 269
SG D ++ +Q FG
Sbjct: 256 SSSGITDTF-KKGLQPFGF 273
>gi|254369138|ref|ZP_04985150.1| hypothetical protein FTAG_00072 [Francisella tularensis subsp.
holarctica FSC022]
gi|157122088|gb|EDO66228.1| hypothetical protein FTAG_00072 [Francisella tularensis subsp.
holarctica FSC022]
Length = 265
Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 53/256 (20%), Positives = 98/256 (38%), Gaps = 10/256 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSGIGGL +++ + ++P IY D PYG ++K + L
Sbjct: 4 NRPIGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQKFAVQTA-KFL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ +IACNT + KD ++ ++ + + A + + +++TPAT+
Sbjct: 63 IDQEVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAGVSLVDNLNT--VGVIATPATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IH ++ + S +EE I E K+ K
Sbjct: 121 NSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGHIVELVAKE----YLSYFHDKNI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251
++L CTHYP+I ++ V +D S ++ LL T+ ++ +
Sbjct: 177 QALILGCTHYPIIKESIAKIL--DVKLIDPSLQASKMLYSLLFENKLLNTTKSNPEYRFY 234
Query: 252 LSGKPDIAMRRLMQGF 267
++ P
Sbjct: 235 VTDIPLKFRSVGEMFL 250
>gi|319937290|ref|ZP_08011697.1| glutamate racemase [Coprobacillus sp. 29_1]
gi|319807656|gb|EFW04249.1| glutamate racemase [Coprobacillus sp. 29_1]
Length = 260
Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats.
Identities = 55/249 (22%), Positives = 105/249 (42%), Gaps = 10/249 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I IFDSG+GGL VL ++ +P + IY+ D+ PYG+ H L +
Sbjct: 1 MDKPIGIFDSGVGGLTVLTALQKELPHENMIYIGDNAHCPYGDKTKHQLLSYTKEICDYF 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + V+ACNT + EL+ + + +G + + + I++T AT
Sbjct: 61 I-SQNVKMIVLACNTTSANVLAELQELY-QVPVVGVIHSTVHDFLTRKKKCPLIIATHAT 118
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ +I Y I + + L +E I++ +E F K
Sbjct: 119 IESHKYREIIMHYEPDIQIFELETPALVPLIESGQYKKGIQD-----VLEHYFYPYVNK- 172
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHAL 250
D ++L CTHYP+++ +++ P +++ +S+SI + L + + +
Sbjct: 173 VDSLILGCTHYPIVLEQIKEVFPNK-EYISSSESICQEVASYLRVHHILNESNDSGATVI 231
Query: 251 FLSGKPDIA 259
+ +G P
Sbjct: 232 YTTGDPHEF 240
>gi|124005254|ref|ZP_01690095.1| glutamate racemase [Microscilla marina ATCC 23134]
gi|123989076|gb|EAY28654.1| glutamate racemase [Microscilla marina ATCC 23134]
Length = 268
Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats.
Identities = 60/261 (22%), Positives = 106/261 (40%), Gaps = 7/261 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
N+I IFDSGIGGL V + +R L+P+ IY D PYG+ AL+ + + +
Sbjct: 1 MDTSNAIGIFDSGIGGLTVARAVRQLLPQESIIYFGDTAHLPYGDKSTAALQAYAIKICN 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPS--MAFLGAVPAIKQAAAYTQSGLISILS 127
+L + + ++ACN+A D ++ S P I + ++
Sbjct: 61 -VLLQQNCKVILMACNSASVAAYDLVKEYVGSRAKVMNVIEPMINYINDVYAGKNVGLIG 119
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+ + + + +++ +L +EE I+ + IE +
Sbjct: 120 TKQTILSNVYKKKVDQLGAGIDLRSLATPLLVPMIEENFFKNSIRAEI----IETYLSRE 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
E + D ++L CTHYPLI ++ V+ LD+S+ +A + +L N
Sbjct: 176 ELQDIDALILGCTHYPLIKASIQKFYNTKVEVLDSSEIVASSLKGMLEMHNLTNKTGKVL 235
Query: 248 HALFLSGKPDIAMRRLMQGFG 268
++S FG
Sbjct: 236 QKFYVSDFTQSFETSTQLFFG 256
>gi|288819213|ref|YP_003433561.1| glutamate racemase [Hydrogenobacter thermophilus TK-6]
gi|288788613|dbj|BAI70360.1| glutamate racemase [Hydrogenobacter thermophilus TK-6]
gi|308752795|gb|ADO46278.1| glutamate racemase [Hydrogenobacter thermophilus TK-6]
Length = 255
Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats.
Identities = 49/252 (19%), Positives = 103/252 (40%), Gaps = 14/252 (5%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+FDSG+GGL VL++++ P +Y+ D PYG + + + ++ L ++
Sbjct: 4 GVFDSGVGGLTVLKEIKKAFPSLDLVYLGDTARVPYGGKSKDTIIRYSLE-CAEFLIRFD 62
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L V+ACNTA + D L+ F P +++A +++ +I ++ T +T++
Sbjct: 63 IDLLVVACNTASSYALDILKKELGIPVFGVIKPGVRKALEVSKNKVIGVIGTKSTIKSGV 122
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
+ + ++ + + VEE D + K ++ + + + D ++
Sbjct: 123 YQRSL--MEAGSVVYAKACPLFVPLVEEGLTHG----DIVDKVVDFYLRDFKNTQMDTLI 176
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTHYPL+ + V +D++ ++ + LF +
Sbjct: 177 LGCTHYPLLAEAIKNYMG-DVQIVDSASALVEDISSFVKNEG------TSSLRLFFTDHS 229
Query: 257 DIAMRRLMQGFG 268
+ G
Sbjct: 230 PSLESFVEYVLG 241
>gi|255994482|ref|ZP_05427617.1| glutamate racemase [Eubacterium saphenum ATCC 49989]
gi|255993195|gb|EEU03284.1| glutamate racemase [Eubacterium saphenum ATCC 49989]
Length = 267
Score = 202 bits (515), Expect = 4e-50, Method: Composition-based stats.
Identities = 57/255 (22%), Positives = 103/255 (40%), Gaps = 8/255 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I FDSG+GGL + + +P IY D PYG+ +++ + +L
Sbjct: 3 NRPIGFFDSGLGGLTCIASVSRRLPHEDIIYFGDTARTPYGSKSVKTIQRFSAEICDFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAI--KQAAAYTQSGLISILSTPA 130
K + VIACN+ LR + + +G + + K + I I+ T A
Sbjct: 63 QK-NVKMIVIACNSVSATSLGFLREKYKDIPIVGIIESAAEKAIDDAKEGNKIGIIGTKA 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ N+I V + + +EE I +K ++ E
Sbjct: 122 TISSMAYKNIIEQSVEGADVAQKACPAFVPLIEEGIIENDIMNLSVKYYLDHFIAE---N 178
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
R + +VL CTHYP I + ++ P + +D SD ++R+ +L + + + +
Sbjct: 179 RINTLVLGCTHYPFIANNIKRNYP-NLKLIDPSDEVSRQIEKILKKKDIVACK-DGNKQF 236
Query: 251 FLSGKPDIAMRRLMQ 265
+ S D +R + +
Sbjct: 237 YASDVSDNFIRMVQE 251
>gi|311693694|gb|ADP96567.1| glutamate racemase [marine bacterium HP15]
Length = 277
Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats.
Identities = 78/262 (29%), Positives = 120/262 (45%), Gaps = 13/262 (4%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL V + +P +Y+AD+ GFPYG + + R L + L+ Y
Sbjct: 1 MFDSGVGGLSVAACIHRQLPGLEIVYLADNAGFPYGEKSEAVVIDRCCSLITRALELYPS 60
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
V+ACNTA T++ LR+ AIK AAA + + + +L+TPAT+RR Y
Sbjct: 61 DAIVVACNTASTVVLPHLRAMTAVPVVGVVP-AIKPAAAKSVNRRMGLLATPATVRRPYL 119
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
L+ + C I + L E+ GI++ E+ + + + D +VL
Sbjct: 120 DRLVEEFAGDCRIERIGHPGLVRWAEDLVSGIEVPLAELSEAMR----PFKEAGVDTVVL 175
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--------QTRVFDDHA 249
CTHYPL++ R P W+D+ ++IARR LL + A
Sbjct: 176 GCTHYPLLLESLRASLPTVRFWVDSGEAIARRVAWLLEQTGRLDVAQGPVASAGKQPVSA 235
Query: 250 LFLSGKPDIAMRRLMQGFGLKS 271
SG + M G GL++
Sbjct: 236 ALFSGPAPKGIAPFMAGLGLEA 257
>gi|208779829|ref|ZP_03247173.1| glutamate racemase [Francisella novicida FTG]
gi|254373122|ref|ZP_04988611.1| glutamate racemase [Francisella tularensis subsp. novicida
GA99-3549]
gi|151570849|gb|EDN36503.1| glutamate racemase [Francisella novicida GA99-3549]
gi|208744284|gb|EDZ90584.1| glutamate racemase [Francisella novicida FTG]
Length = 265
Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats.
Identities = 49/256 (19%), Positives = 97/256 (37%), Gaps = 10/256 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSGIGGL +++ + ++P IY D PYG ++K L
Sbjct: 4 NRPIGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQKFAAQTA-KFL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + +IACNT + KD ++ ++ + + A + + +++TPAT+
Sbjct: 63 IEQEVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAGVSLVDNLNT--VGVIATPATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IH ++ + S +E + ++ + K
Sbjct: 121 NSNAYALQIHKKNPNIEVYSNPCGLFVSMIE----EGFVSGQIVELVAKEYLSYFHDKNI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251
++L CTHYP+I ++ V +D S ++ LL T+ ++ +
Sbjct: 177 QALILGCTHYPIIKESIAKIL--DVKLIDPSLQASKMLYSLLFENKLLNTTKSNPEYRFY 234
Query: 252 LSGKPDIAMRRLMQGF 267
++ P
Sbjct: 235 VTDIPLKFRSVGEMFL 250
>gi|315635708|ref|ZP_07890971.1| glutamate racemase [Arcobacter butzleri JV22]
gi|315480005|gb|EFU70675.1| glutamate racemase [Arcobacter butzleri JV22]
Length = 261
Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats.
Identities = 66/229 (28%), Positives = 107/229 (46%), Gaps = 6/229 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ +FDSG+GGL VL+ + ++ Y+AD PYG + + KR + + +L +
Sbjct: 2 KVGVFDSGLGGLTVLKSILKVLKNAEIFYIADTAYAPYGEKDSALILKRCEDITNYLLKE 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
Y+ ++ACNTA + LR F S+ +G P IK A T+S I IL+TP+TL+
Sbjct: 62 YKIDALIVACNTATSAAIKHLRENFSSLIVIGTEPGIKPAILNTKSSNIGILATPSTLKS 121
Query: 135 TYTSNLIHSYVSQCHI--HLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
L++ S + + LA ++E+ K +E I + +
Sbjct: 122 DKYQLLVNELSSIKKVNLFEQACPGLAMQIEKGEINTLTT----YKMLEEWLIPMKEENV 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
D IVL CTHYPLI +++ + + D+IA+R L
Sbjct: 178 DTIVLGCTHYPLISQTIKKIMGEDITLIQTGDAIAKRLLSLSEEKGHKN 226
>gi|116074593|ref|ZP_01471854.1| Glutamate racemase [Synechococcus sp. RS9916]
gi|116067815|gb|EAU73568.1| Glutamate racemase [Synechococcus sp. RS9916]
Length = 265
Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats.
Identities = 59/255 (23%), Positives = 101/255 (39%), Gaps = 12/255 (4%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+FDSG+GGL VL+ + +Y+ D PYG+ ++ + + L
Sbjct: 6 GLFDSGVGGLTVLRSILQRHGPVPTVYLGDTARVPYGSRSPAEIRSIAAEVVA-WLKHQH 64
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACNT L R A + V I AAA + + +L+TPAT+
Sbjct: 65 VSTVVMACNTTNAL----ARDVAEGQAGVPVVGLIGAAAAMVRETRVGVLATPATVASGA 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
I + + + +E + E+++E G + ++
Sbjct: 121 YRQSIEALNPGTLVVQQACPNFVPLIE----SGDLSSQELREEAMGYLTPLLEASVEAVI 176
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI---NTHQTRVFDDHALFLS 253
L CTHYPL+ + R L P V +D ++ +AR+ LL + ++ L ++
Sbjct: 177 LGCTHYPLLEPLLRSLLPPDVRLIDPAEGVARQLDALLGYPIPGRPERPLSLENTRLCVT 236
Query: 254 GKPDIAMRRLMQGFG 268
P+ RR G
Sbjct: 237 ADPESFARRATPWLG 251
>gi|300857321|ref|YP_003782305.1| glutamate racemase [Clostridium ljungdahlii DSM 13528]
gi|300437436|gb|ADK17203.1| glutamate racemase [Clostridium ljungdahlii DSM 13528]
Length = 261
Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats.
Identities = 64/257 (24%), Positives = 110/257 (42%), Gaps = 7/257 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I FDSGIGG+ VL++ ++ F+Y D PYG + KRL F ++L
Sbjct: 5 DRPIGFFDSGIGGISVLKEAVKILSNEDFVYFGDSKMAPYGVKTAEEV-KRLTFNAVELL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
V+ACNTA + +LR + SM +G PA+K A + + G I I++T T
Sbjct: 64 LTKNIKALVVACNTATSAAIIDLRKKYSKSMPIIGIEPALKPAVEFNRKGKIVIMATTMT 123
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L SNL+ Y S+ I + L +E+ +E++ ++ + +
Sbjct: 124 LSERKFSNLMKKYESRSSIQPLPCPGLVELIEQGKTEG----EEVEGYLKEKLNSLKDEG 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHAL 250
+VL CTHYP + R++ + +D S + + L + + +
Sbjct: 180 IAAVVLGCTHYPFVKKSIRKILNEDIPIIDGSKGTVEQLKRQLVKYHIKNNKNKAGKVTI 239
Query: 251 FLSGKPDIAMRRLMQGF 267
F S + ++ +
Sbjct: 240 FNSMDSEFIIQLSYKLL 256
>gi|56708260|ref|YP_170156.1| glutamate racemase [Francisella tularensis subsp. tularensis SCHU
S4]
gi|110670731|ref|YP_667288.1| glutamate racemase [Francisella tularensis subsp. tularensis
FSC198]
gi|134302177|ref|YP_001122146.1| glutamate racemase [Francisella tularensis subsp. tularensis
WY96-3418]
gi|224457380|ref|ZP_03665853.1| glutamate racemase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|254370745|ref|ZP_04986750.1| hypothetical protein [Francisella tularensis subsp. tularensis
FSC033]
gi|254875080|ref|ZP_05247790.1| glutamate racemase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|56604752|emb|CAG45830.1| glutamate racemase [Francisella tularensis subsp. tularensis SCHU
S4]
gi|110321064|emb|CAL09213.1| glutamate racemase [Francisella tularensis subsp. tularensis
FSC198]
gi|134049954|gb|ABO47025.1| glutamate racemase [Francisella tularensis subsp. tularensis
WY96-3418]
gi|151568988|gb|EDN34642.1| hypothetical protein FTBG_00552 [Francisella tularensis subsp.
tularensis FSC033]
gi|254841079|gb|EET19515.1| glutamate racemase [Francisella tularensis subsp. tularensis
MA00-2987]
gi|282159487|gb|ADA78878.1| glutamate racemase [Francisella tularensis subsp. tularensis
NE061598]
Length = 265
Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats.
Identities = 53/256 (20%), Positives = 97/256 (37%), Gaps = 10/256 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSGIGGL +++ + ++P IY D PYG ++K L
Sbjct: 4 NRPIGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQKFAAQTA-KFL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ +IACNT + KD ++ ++ + + A + + +++TPAT+
Sbjct: 63 IDQEVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAGVSLVDNLNT--VGVIATPATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IH ++ + S +EE I E K+ K
Sbjct: 121 NSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGHIVELVAKE----YLSYFHDKNI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251
++L CTHYP+I ++ V +D S ++ LL T+ ++ +
Sbjct: 177 QALILGCTHYPIIKESIAKIL--DVKLIDPSLQASKMLYSLLFENKLLNTTKSNPEYRFY 234
Query: 252 LSGKPDIAMRRLMQGF 267
++ P
Sbjct: 235 VTDIPLKFRSVGEMFL 250
>gi|227498833|ref|ZP_03928973.1| glutamate racemase [Acidaminococcus sp. D21]
gi|226904285|gb|EEH90203.1| glutamate racemase [Acidaminococcus sp. D21]
Length = 274
Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats.
Identities = 51/266 (19%), Positives = 97/266 (36%), Gaps = 6/266 (2%)
Query: 2 KIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALK 61
+ ++ + I + DSG+GGL VL+ ++ MP FI++ D PYG+ ++
Sbjct: 1 MVKSWRDSMEKDRPIGVIDSGVGGLTVLKWLQKKMPHEQFIFIGDTARTPYGDRAREEIQ 60
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
+ + +D L + + V+ACNT L D +R+ + +G T +
Sbjct: 61 RFVKE-MTDCLARRKIKELVVACNTITVLGLDTIRNGY-DFDVIGMAKGASNIREVTHNN 118
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ +T T+ I + + L +E G E+++ I+
Sbjct: 119 KVGFFATDFTVSTGAHKREIERLDPGVEVFGLGCPKLVPLIESEKFG----RPEMQEAIK 174
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D ++L+CTHYP + V LD ++ A L +
Sbjct: 175 EYVDAMKVHGIDTLLLSCTHYPFLHDEIAAAFGPQVTVLDPAEMTTDEAIKHLQNKGLLK 234
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
T + + R +
Sbjct: 235 TEGEGSLEVCFTADLARCKRLASRML 260
>gi|146294088|ref|YP_001184512.1| glutamate racemase [Shewanella putrefaciens CN-32]
gi|145565778|gb|ABP76713.1| glutamate racemase [Shewanella putrefaciens CN-32]
Length = 270
Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats.
Identities = 84/252 (33%), Positives = 131/252 (51%), Gaps = 2/252 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +SIL+FDSG GGL V +++ +P YV+D FPYG LKKR++ + S
Sbjct: 1 MDSSILVFDSGSGGLTVAAEIKKRIPNIRLSYVSDAGFFPYGKKPHDILKKRILDVISKA 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
QP + VIACNTA T+ D LR T ++ +G VPAIK AA+ ++S ++ +L T T
Sbjct: 61 SSLTQPDIIVIACNTASTIALDLLR-TELNIPIVGVVPAIKPAASLSKSKVVMVLGTHTT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ Y LI ++ ++C + + S +L E+ G D + +EI+ F + +
Sbjct: 120 VNSAYVKMLITNFATECKVLVEDSEVLVLASEQKLLGNGFDPDIVTQEIQRIFSKPDAFN 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHAL 250
TDV+VLACTH+PLI + P V +D+ +IA R LL + +
Sbjct: 180 TDVLVLACTHFPLINAEIKNALPHHVTVIDSGLAIANRTHSLLKIEHQACSPILDPEITF 239
Query: 251 FLSGKPDIAMRR 262
+ +G D +
Sbjct: 240 YTTGNVDSEQAK 251
>gi|167752024|ref|ZP_02424151.1| hypothetical protein ALIPUT_00266 [Alistipes putredinis DSM 17216]
gi|167660265|gb|EDS04395.1| hypothetical protein ALIPUT_00266 [Alistipes putredinis DSM 17216]
Length = 255
Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats.
Identities = 67/258 (25%), Positives = 109/258 (42%), Gaps = 7/258 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ ++DSG+GGL V +++R +PE +Y+ D PYG + + L
Sbjct: 3 NRPVGVYDSGLGGLTVWREIRRQLPEESLVYLGDGKNCPYGARPADEICRLADEAVGR-L 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA D LR + M +G PA+K A T+SG++ +L+T +L
Sbjct: 62 VGAGCKMVVVACNTATAAAIDFLRRKYRQMPIVGMEPAVKPACLNTRSGVVGVLATARSL 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
Y + VE + + E + + +
Sbjct: 122 DGDLFRRTAARYGENIRVLTAVGEGFVELVE----EDREQSPEAVETVRRVLEPMIREGA 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPW-PVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D IVL CTHYP ++ VFRQ+ V +D S ++ RR LL + + + + F
Sbjct: 178 DQIVLGCTHYPFLLPVFRQVIGERGVAVVDPSPAVGRRVGQLLDQYDLRAEKGATANYGF 237
Query: 252 LSGKPDIAMRRLM-QGFG 268
L+ + RL + FG
Sbjct: 238 LTFADEAYRSRLECKAFG 255
>gi|118497764|ref|YP_898814.1| glutamate racemase [Francisella tularensis subsp. novicida U112]
gi|194323736|ref|ZP_03057512.1| glutamate racemase [Francisella tularensis subsp. novicida FTE]
gi|118423670|gb|ABK90060.1| glutamate racemase [Francisella novicida U112]
gi|194322100|gb|EDX19582.1| glutamate racemase [Francisella tularensis subsp. novicida FTE]
Length = 265
Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats.
Identities = 49/256 (19%), Positives = 97/256 (37%), Gaps = 10/256 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSGIGGL +++ + ++P IY D PYG ++K L
Sbjct: 4 NRPIGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQKFAAQTA-KFL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + +IACNT + KD ++ ++ + + A + + +++TPAT+
Sbjct: 63 IEQEVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAGVSLVDNLNT--VGVIATPATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IH ++ + S +E + ++ + K
Sbjct: 121 NSNAYALQIHKKNPNIEVYSNPCGLFVSMIE----EGFVSGQIVELVAKEYLSYFHDKNI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251
++L CTHYP+I ++ V +D S ++ LL T+ ++ +
Sbjct: 177 QALILGCTHYPIIKESIAKIL--DVKLIDPSLQASKMLYSLLFENKLLNTTKSNPEYKFY 234
Query: 252 LSGKPDIAMRRLMQGF 267
++ P
Sbjct: 235 VTDIPLKFRSVGEMFL 250
>gi|296454516|ref|YP_003661659.1| glutamate racemase [Bifidobacterium longum subsp. longum JDM301]
gi|296183947|gb|ADH00829.1| glutamate racemase [Bifidobacterium longum subsp. longum JDM301]
Length = 264
Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats.
Identities = 60/266 (22%), Positives = 103/266 (38%), Gaps = 13/266 (4%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I +FDSG+GG+ V +++ MP H +Y D PYG ++ +
Sbjct: 1 MSSSAPIGVFDSGLGGISVARQIAKDMPAEHVLYFGDSANAPYGVKTPEQVRALSFDIVE 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--------YTQSG 121
+ + VIACNTA + ++LR + + +G PA+K A +
Sbjct: 61 RFV-RQGVKAVVIACNTATSAAVNDLREHY-DIPIIGMEPALKVACDRGDVPSDPHHIPQ 118
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ + +TP TLR + L+ + S I L VE G D + + +
Sbjct: 119 RVIVAATPLTLRERKFAKLMDRFDSNNTIFKEPCPDLVEIVESGRLG---DHDLVMRTLH 175
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
G F + + + D +VL CTH+ FR+L P +D ++ R +L +
Sbjct: 176 GYFDQYDMEHIDSVVLGCTHFVFYRDYFRELLPERAAVIDGNEGTVRHLGVVLESLGKLA 235
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ + RL +
Sbjct: 236 PEDATGGVELANSDLSERVTRLSRDL 261
>gi|33865544|ref|NP_897103.1| putative aspartate and glutamate racemase:glutamate racemase
[Synechococcus sp. WH 8102]
gi|33632713|emb|CAE07525.1| Putative Aspartate and glutamate racemases:Glutamate racemase
[Synechococcus sp. WH 8102]
Length = 262
Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats.
Identities = 62/259 (23%), Positives = 103/259 (39%), Gaps = 11/259 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + FDSG+GGL VL+++ +Y+ D PYGN +++ +
Sbjct: 1 MSPRLGFFDSGVGGLTVLRRVLERHGSVACVYLGDTARVPYGNRPPAEIRRIAAEVVG-W 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L Q V+ACNT L R A + I AAA ++ + +L+TPAT
Sbjct: 60 LRDQQVSTVVMACNTTNAL----ARDVAEGQAGGPVIGLIGAAAAMVETRRVGVLATPAT 115
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ S I + + + +E DE+++ +
Sbjct: 116 VASAAYSASIEALHPGALVVEQACPAFVPLIE----AGDFSSDELRQVAKVYLEPLLAAS 171
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL--PRINTHQTRVFDDHA 249
+ IVL CTHYPL++ + +QL P + +D + +AR+ +L PR T
Sbjct: 172 VETIVLGCTHYPLLIPLLKQLLPDAIQLVDPALGVARQLDAVLGVPRSTPGDTLELGQCR 231
Query: 250 LFLSGKPDIAMRRLMQGFG 268
++ PD R G
Sbjct: 232 FCVTADPDGFANRATPWLG 250
>gi|308068806|ref|YP_003870411.1| glutamate racemase [Paenibacillus polymyxa E681]
gi|305858085|gb|ADM69873.1| Glutamate racemase [Paenibacillus polymyxa E681]
Length = 267
Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats.
Identities = 61/261 (23%), Positives = 107/261 (40%), Gaps = 14/261 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I FDSG+GG+ VL + +P +F+Y+AD + PYG + + IL +
Sbjct: 2 KIGFFDSGLGGITVLSEALRRLPNENFVYMADTLHVPYGTKTPQEVLGYVKASVETILKE 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILSTPATL 132
VIACNTA ++ ELR +P + +G PA+K A + + +L+TP TL
Sbjct: 62 -DVKALVIACNTATSIAVAELRKEYP-IPIIGMEPAVKPAVEMNRANGKRVLVLATPLTL 119
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+++ + L+ + + L E+ E+ +
Sbjct: 120 KQSCYAALVSRVDDHGSVDSLPLPELVQYCEQL----NFDRAEMSEYFNRELSSFNLDIY 175
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT------RVFD 246
+VL CTHYP + R+L P + +D S RR + +L N ++
Sbjct: 176 GTVVLGCTHYPFYKEILRELLPSHIQLIDGSQGTVRRLKQVLSERNLLESLPKYGPSQEG 235
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
S + + + ++ +
Sbjct: 236 HITFLCSSQDEAYVHKMERAL 256
>gi|291516158|emb|CBK69774.1| glutamate racemase [Bifidobacterium longum subsp. longum F8]
Length = 264
Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats.
Identities = 60/266 (22%), Positives = 103/266 (38%), Gaps = 13/266 (4%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I +FDSG+GG+ V +++ MP H +Y D PYG ++ +
Sbjct: 1 MSSSAPIGVFDSGLGGISVARQIAKDMPAEHVLYFGDSASAPYGIKTPEQVRALSFDIVE 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--------YTQSG 121
+ + VIACNTA + ++LR + + +G PA+K A +
Sbjct: 61 RFV-RQGVKAVVIACNTATSAAVNDLREHY-DIPIIGMEPALKVACDRGDVPSDPHHIPQ 118
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ + +TP TLR + L+ + S I L VE G D + + +
Sbjct: 119 RVIVAATPLTLRERKFAKLMDRFDSNNTIFKEPCPDLVEIVESGRLG---DHDLVMRTLH 175
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
G F + + + D +VL CTH+ FR+L P +D ++ R +L +
Sbjct: 176 GYFDQYDMEHIDSVVLGCTHFVFYRDYFRELLPERAAVIDGNEGTVRHLGVVLESLGKLA 235
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ P + L +
Sbjct: 236 PEDATGGVELANSDPSERIAELSRKL 261
>gi|75675509|ref|YP_317930.1| glutamate racemase [Nitrobacter winogradskyi Nb-255]
gi|74420379|gb|ABA04578.1| glutamate racemase [Nitrobacter winogradskyi Nb-255]
Length = 271
Score = 201 bits (512), Expect = 7e-50, Method: Composition-based stats.
Identities = 98/267 (36%), Positives = 147/267 (55%), Gaps = 9/267 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+IL+ DSG+GGL VL+++ +P +IYVADD FPYG + + R++ L
Sbjct: 1 MSYSPTILVLDSGLGGLTVLREIVNALPAARYIYVADDAFFPYGRLSEEDIIARVVPLVG 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+++ + P + VIACNT + LR+ +P+ F+G VPAIK A A +++ +S+L T
Sbjct: 61 ELIGAHAPDIVVIACNTMSVSVLGPLRAAYPA-PFVGTVPAIKPACAASKTKRVSVLGTR 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT++R YT LI ++ C + LV + LAS E+ G + + +I EI CF+
Sbjct: 120 ATVQREYTQALIRNHAQACTVTLVGAARLASLAEDALSGKLVSDADILSEITPCFVPAGE 179
Query: 190 K---RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
RTD +VLACTHYPL++ +L+PWPV W+D + +IARR LL +
Sbjct: 180 GGGLRTDAVVLACTHYPLLLDRLLRLAPWPVSWIDPAPAIARRVVDLLGLLGPLAPNTAG 239
Query: 247 DHA-----LFLSGKPDIAMRRLMQGFG 268
DH +F SG+ L FG
Sbjct: 240 DHDRPPEMIFTSGRSRTLADALAPFFG 266
>gi|149186762|ref|ZP_01865073.1| Glutamate racemase [Erythrobacter sp. SD-21]
gi|148829670|gb|EDL48110.1| Glutamate racemase [Erythrobacter sp. SD-21]
Length = 264
Score = 201 bits (512), Expect = 7e-50, Method: Composition-based stats.
Identities = 85/257 (33%), Positives = 127/257 (49%), Gaps = 4/257 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ IL+FDSG+GGL VL ++R LMP+ IY AD G PYG + + R+ L
Sbjct: 1 MNSSSPILLFDSGVGGLTVLAELRQLMPKAPVIYAADMAGLPYGTKTEAEVAARVAGLLG 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ ++Y P L IACNTA T+ +R + +G VPAIK AAA T++G I +L T
Sbjct: 61 RMAERYNPRLICIACNTASTIALGMVREVLET-PIVGTVPAIKPAAALTKTGTIGLLGTQ 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+R+ Y +L + S + + L + E G + DE+ K G ++ G
Sbjct: 120 ATVRQGYVDDLEREFASDKTLLRYGANDLVALGEHKLRGESVSVDEVAKAARGLVLQVGG 179
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+ D +VLACTH+PL+ R+ V ++ + IARR LL + A
Sbjct: 180 EDLDTVVLACTHFPLLEPELREAFGKHVTFVHGAQGIARRIAHLLE--GERFSFWSKSFA 237
Query: 250 LFLSGKPDIAMRRLMQG 266
+ +G+ D R
Sbjct: 238 V-TTGELDDFRRLAGAF 253
>gi|304410374|ref|ZP_07391993.1| glutamate racemase [Shewanella baltica OS183]
gi|307301915|ref|ZP_07581673.1| glutamate racemase [Shewanella baltica BA175]
gi|304351783|gb|EFM16182.1| glutamate racemase [Shewanella baltica OS183]
gi|306913953|gb|EFN44374.1| glutamate racemase [Shewanella baltica BA175]
Length = 270
Score = 201 bits (512), Expect = 8e-50, Method: Composition-based stats.
Identities = 83/252 (32%), Positives = 129/252 (51%), Gaps = 2/252 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +SIL+FDSG GGL V +++ +P YV+D FPYG LKKR++ + S
Sbjct: 1 MDSSILVFDSGSGGLTVAAEIKKRIPNIRLSYVSDAGFFPYGKKPHDILKKRILDVISKA 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
QP + VIACNTA T+ D LR+ ++ +G VPAIK A + ++S ++ +L T T
Sbjct: 61 SSLTQPNIIVIACNTASTIALDLLRAEL-NIPIVGVVPAIKPATSLSKSKVVMVLGTHTT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ Y LI + ++C + + S L E+ G D + +EI+ F + +
Sbjct: 120 VNSAYVKMLITDFATECKVLVEDSEALVLASEQKLLGKAFDPDIVTQEIQRIFNKPDAFD 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP-RINTHQTRVFDDHAL 250
TDV+VLACTH+PLI + P V +D+ +IA R LL T + +
Sbjct: 180 TDVLVLACTHFPLINAEIKNALPHHVTVIDSGLAIANRTHSLLKIEHQTCSPILDPEVTF 239
Query: 251 FLSGKPDIAMRR 262
+ +G D +
Sbjct: 240 YTTGNVDSEQAK 251
>gi|294792937|ref|ZP_06758083.1| glutamate racemase [Veillonella sp. 6_1_27]
gi|294455882|gb|EFG24246.1| glutamate racemase [Veillonella sp. 6_1_27]
Length = 272
Score = 201 bits (512), Expect = 8e-50, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 106/256 (41%), Gaps = 7/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL VL+ ++ P FIY+ D+ P GN D + + L
Sbjct: 11 QLPIGVFDSGVGGLSVLKVLQEQFPNEDFIYIGDNANNPVGNRSDDEITYLACRIAE-TL 69
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ L VIACNT + D +R S+ +G +K A ++S I I++T AT+
Sbjct: 70 ERQPVKLMVIACNTFTVVALDAVRELV-SVPVIGVSQGVKTAINKSKSKTIGIMATVATV 128
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
++ + + LA +E+ + + +++ + +
Sbjct: 129 NSHIHKHVALEVDHEVLVWEQPCPELAGLIEQ----GHLDDYFVREVCKEYLEPLLSREI 184
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALF 251
+V+VL CTH+P + + +L+ + ++D + + R L N + L
Sbjct: 185 EVVVLGCTHFPFVQPLLEELTSCRIQFIDPAFETSELVRHRLESKNLFNPQDTVGTVTLC 244
Query: 252 LSGKPDIAMRRLMQGF 267
+ ++
Sbjct: 245 FTKDVELGDALSASFL 260
>gi|281421511|ref|ZP_06252510.1| glutamate racemase [Prevotella copri DSM 18205]
gi|281404583|gb|EFB35263.1| glutamate racemase [Prevotella copri DSM 18205]
Length = 278
Score = 201 bits (512), Expect = 8e-50, Method: Composition-based stats.
Identities = 55/261 (21%), Positives = 94/261 (36%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L +R MP+Y ++Y+ D+ PYG+ + K L
Sbjct: 9 PIGVFDSGYGGLTILHGLRQTMPQYDYMYLGDNARAPYGSRSFEVVYKFTRQAVLK-LFS 67
Query: 75 YQPVLSVIACNTAFTLIKDELRST------FPSMAFLGAVPAIKQAAAYTQSGLISILST 128
L ++ CNTA L+ P + T+S + +L+T
Sbjct: 68 MGCHLVILGCNTASAKALRSLQQRDIPELDPSRRVLGIIRPTAEVIGTITKSNHVGLLAT 127
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ + I + + V+ + A+ VE + +KK I+ +
Sbjct: 128 EGTIKSQSYNMEISKLWPEIQVSGVACPLWAAIVEANEADSPGADYFVKKRIDQLM--LK 185
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFD 246
D I+L CTHYPL++ + P V + +A + L R +
Sbjct: 186 DADIDTIILGCTHYPLLMSSIVKNLPDGVRVVPQGQYVANSLKDYLNRHPQMEQMITKTG 245
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ D
Sbjct: 246 SCRYLTTESEDKFKESAQIFL 266
>gi|56552093|ref|YP_162932.1| glutamate racemase [Zymomonas mobilis subsp. mobilis ZM4]
gi|56543667|gb|AAV89821.1| glutamate racemase [Zymomonas mobilis subsp. mobilis ZM4]
Length = 276
Score = 201 bits (512), Expect = 8e-50, Method: Composition-based stats.
Identities = 85/222 (38%), Positives = 126/222 (56%), Gaps = 1/222 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +L FDSG+GGL VL ++ +PE +YVAD+ GFPYG + + R+ L +
Sbjct: 1 MSRPVLFFDSGVGGLSVLAAVKKALPEAPILYVADNGGFPYGTKSEEEIATRVPALLGRL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+++Y P L VIACNTA T+ +RS + +G VPAIK AA ++S + +L T AT
Sbjct: 61 VERYDPALLVIACNTASTIALPFIRSAL-QIPVVGTVPAIKPAALLSKSHVFGVLGTEAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R+ Y +L + S C + S L + E G K + E++ + EG R
Sbjct: 120 IRQPYVDHLSEEFASDCTVIRQGSANLVTLAEAKLRGEKSDLALYRAELDRLLQQPEGDR 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
DV+VLACTH+PL+ +SP P+ ++D S+ IARRAR L
Sbjct: 180 IDVVVLACTHFPLVKEELEAVSPRPLLFIDGSEGIARRARYL 221
>gi|241762044|ref|ZP_04760128.1| glutamate racemase [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|241373510|gb|EER63097.1| glutamate racemase [Zymomonas mobilis subsp. mobilis ATCC 10988]
Length = 276
Score = 201 bits (511), Expect = 9e-50, Method: Composition-based stats.
Identities = 84/222 (37%), Positives = 126/222 (56%), Gaps = 1/222 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +L FDSG+GGL VL ++ +PE +YVAD+ GFPYG + + R+ L +
Sbjct: 1 MSRPVLFFDSGVGGLSVLAAVKKALPEAPILYVADNGGFPYGTKSEEEIATRVPALLGRL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+++Y P L VIACNTA T+ +RS + +G VPAIK AA ++S + +L T AT
Sbjct: 61 VERYDPALLVIACNTASTIALPFIRSAL-QIPVVGTVPAIKPAALLSKSHVFGVLGTEAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R+ Y +L + S C + S L + E G K + E++ + EG +
Sbjct: 120 IRQPYVDHLSEEFASDCTVIRQGSANLVTLAEAKLRGEKSDLALYRAELDRLLQQPEGDQ 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
DV+VLACTH+PL+ +SP P+ ++D S+ IARRAR L
Sbjct: 180 IDVVVLACTHFPLVKEELEAVSPRPLLFIDGSEGIARRARYL 221
>gi|170769670|ref|ZP_02904123.1| glutamate racemase [Escherichia albertii TW07627]
gi|170121478|gb|EDS90409.1| glutamate racemase [Escherichia albertii TW07627]
Length = 262
Score = 201 bits (511), Expect = 9e-50, Method: Composition-based stats.
Identities = 84/256 (32%), Positives = 140/256 (54%), Gaps = 4/256 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V +++R L+P+ H+IY D+V FPYG + + +R++ + + + + Y
Sbjct: 2 LVFDSGVGGLSVYEEIRRLLPDLHYIYAFDNVAFPYGEKSEEFVVERVVEIVTAVQEHYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+V+ACNTA T+ LR F + +G VPAIK AA T +G++ +L+T T++R+Y
Sbjct: 62 LALAVVACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + ++C I ++ S + E G I D +K+ + KE D +V
Sbjct: 121 THELIARFANECQIEMLGSAEMVELAEAKLHGEDISLDALKRILRPWLRMKEPP--DTVV 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PL+ Q+ P +D+ +IARR LL + A ++ P
Sbjct: 179 LGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPEAKSADANIAFCMAMTP 238
Query: 257 D-IAMRRLMQGFGLKS 271
+ + ++Q +G K+
Sbjct: 239 EAEQLLPVLQRYGFKT 254
>gi|30248466|ref|NP_840536.1| aspartate and glutamate racemase:glutamate racemase [Nitrosomonas
europaea ATCC 19718]
gi|30138352|emb|CAD84360.1| Aspartate and glutamate racemases:Glutamate racemase [Nitrosomonas
europaea ATCC 19718]
Length = 271
Score = 201 bits (511), Expect = 9e-50, Method: Composition-based stats.
Identities = 72/255 (28%), Positives = 115/255 (45%), Gaps = 8/255 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ IFDSG+GGL V + R L+P F+YVAD PYG+ E + +R+ + L
Sbjct: 6 VGIFDSGVGGLAVYRAARKLLPHQAFVYVADSGFAPYGSRESAYIIRRVTEIADA-LVNN 64
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA LR+ + S+ +G PAIK AAA +++G I +L+T T
Sbjct: 65 GAKALVVACNTATVTTVTALRAKY-SLPIIGIEPAIKPAAAISRNGRIVVLTTRRTAESE 123
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ L Y + I L LA +VE I +E+K+ + DV+
Sbjct: 124 AVAQLCVRYGTHVQIMLQPCPGLADQVE----AGNIDGEEVKEMLRQYLAPAVSLANDVV 179
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALFLS- 253
VL CTH+ + + L+ V ++ S+++AR+ L + A + +
Sbjct: 180 VLGCTHFTFLADQIQNLAGPQVTIIEPSEAVARQLAHRLSSSKMISVNQAQAAEAFYTTA 239
Query: 254 GKPDIAMRRLMQGFG 268
P + + G
Sbjct: 240 ASPSAVGDIMSKLLG 254
>gi|269797494|ref|YP_003311394.1| glutamate racemase [Veillonella parvula DSM 2008]
gi|269094123|gb|ACZ24114.1| glutamate racemase [Veillonella parvula DSM 2008]
Length = 267
Score = 201 bits (511), Expect = 9e-50, Method: Composition-based stats.
Identities = 57/256 (22%), Positives = 107/256 (41%), Gaps = 7/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL VL+ ++ P FIY+ D+ P GN D + + L
Sbjct: 6 QLPIGVFDSGVGGLSVLKVLQEQFPNEDFIYIGDNANNPVGNRSDDEITYLACRIAE-TL 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+K L VIACNT + D +R S+ +G +K A ++S I I++T AT+
Sbjct: 65 EKQPVKLMVIACNTFTVVALDAVRELV-SVPVIGVSQGVKTAINKSKSKTIGIMATVATV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
++ + + LA +E+ + + +++ + +
Sbjct: 124 NSHIHKHVALEVDHEVFVWEQPCPELAGLIEQ----GHLDDYFVREVCKDYLEPLLSREI 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALF 251
+V+VL CTH+P + + +L+ + ++D + + R L N + L+
Sbjct: 180 EVVVLGCTHFPFVQPLLEELTSCRIQFIDPAFETSELVRHRLESKNLFNHQDTVGTVTLY 239
Query: 252 LSGKPDIAMRRLMQGF 267
+ ++
Sbjct: 240 FTKDVELGDTLSASFL 255
>gi|307776633|pdb|3OUT|A Chain A, Crystal Structure Of Glutamate Racemase From Francisella
Tularensis Subsp. Tularensis Schu S4 In Complex With
D-Glutamate.
gi|307776634|pdb|3OUT|B Chain B, Crystal Structure Of Glutamate Racemase From Francisella
Tularensis Subsp. Tularensis Schu S4 In Complex With
D-Glutamate.
gi|307776635|pdb|3OUT|C Chain C, Crystal Structure Of Glutamate Racemase From Francisella
Tularensis Subsp. Tularensis Schu S4 In Complex With
D-Glutamate
Length = 268
Score = 201 bits (511), Expect = 9e-50, Method: Composition-based stats.
Identities = 53/256 (20%), Positives = 97/256 (37%), Gaps = 10/256 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSGIGGL +++ + ++P IY D PYG ++K L
Sbjct: 7 NRPIGVFDSGIGGLTIVKNLXSILPNEDIIYFGDIARIPYGTKSRATIQKFAAQTA-KFL 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ +IACNT + KD ++ ++ + + A + + +++TPAT+
Sbjct: 66 IDQEVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAGVSLVDNLNT--VGVIATPATI 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IH ++ + S +EE I E K+ K
Sbjct: 124 NSNAYALQIHKKNPNIEVYSNPCGLFVSXIEEGFVSGHIVELVAKE----YLSYFHDKNI 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251
++L CTHYP+I ++ V +D S ++ LL T+ ++ +
Sbjct: 180 QALILGCTHYPIIKESIAKIL--DVKLIDPSLQASKXLYSLLFENKLLNTTKSNPEYRFY 237
Query: 252 LSGKPDIAMRRLMQGF 267
++ P
Sbjct: 238 VTDIPLKFRSVGEXFL 253
>gi|326560827|gb|EGE11193.1| glutamate racemase [Moraxella catarrhalis 46P47B1]
gi|326561925|gb|EGE12260.1| glutamate racemase [Moraxella catarrhalis 7169]
gi|326567030|gb|EGE17153.1| glutamate racemase [Moraxella catarrhalis 12P80B1]
Length = 285
Score = 201 bits (511), Expect = 9e-50, Method: Composition-based stats.
Identities = 72/267 (26%), Positives = 111/267 (41%), Gaps = 16/267 (5%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ I IFDSG+GGL V + + LMP+ ++Y AD PYGN + +
Sbjct: 10 NPQKSAPIGIFDSGVGGLSVYRHLSELMPKERYVYYADTQNLPYGNKSGDEILFLTLQAV 69
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
L + L VIACN+A LR + +G VPA+K A +Q+ I++L+T
Sbjct: 70 D-WLCRQGCKLIVIACNSASAYSLTTLR-IRCRIPIVGLVPAVKPACEMSQTRQIALLAT 127
Query: 129 PATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
ATL+ + +IH +H +L VE D + K+ + + +
Sbjct: 128 QATLQGQLLAEVIHEVATSKGVTVHKHFEPMLVPWVESGMPINHHVADLLIKQTQAWYQQ 187
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSDSIARRARCLLPRINTHQTR 243
D++VL CTHYP + + LD+ +IA+R + LL
Sbjct: 188 ----GVDILVLGCTHYPFFRQFLQDWIDEQHITMTLLDSGAAIAQRVKSLLDCFGISADG 243
Query: 244 V--FDDHALFLSGKPDIA---MRRLMQ 265
+ + S D RRL Q
Sbjct: 244 DVLDEPLTFYASDLTDNVPATARRLSQ 270
>gi|326572368|gb|EGE22361.1| glutamate racemase [Moraxella catarrhalis BC7]
Length = 285
Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 72/268 (26%), Positives = 111/268 (41%), Gaps = 16/268 (5%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ I IFDSG+GGL V + + LMP+ ++Y AD PYGN + +
Sbjct: 9 INPQKSAPIGIFDSGVGGLSVYRHLAELMPKERYVYYADTQNLPYGNKSGDEILFLTLQA 68
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
L + L VIACN+A LR + +G VPA+K A +Q+ I++L+
Sbjct: 69 VD-WLCRQGCKLIVIACNSASAYSLTTLR-IRCRIPIVGLVPAVKPACEMSQTRQIALLA 126
Query: 128 TPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
T ATL+ + +IH +H +L VE D + K+ + +
Sbjct: 127 TQATLQGQLLAEVIHEVATSKGVTVHKHFEPMLVPWVESGMPINHHVADLLIKQTQAWYQ 186
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSDSIARRARCLLPRINTHQT 242
+ D++VL CTHYP + + LD+ +IA+R + LL
Sbjct: 187 Q----GVDILVLGCTHYPFFRQFLQDWIDEQHITMTLLDSGAAIAQRVKSLLDCFGISAD 242
Query: 243 RV--FDDHALFLSGKPDIA---MRRLMQ 265
+ + S D RRL Q
Sbjct: 243 GDVLDEPLTFYASDLTDNVPATARRLSQ 270
>gi|157736547|ref|YP_001489230.1| glutamate racemase [Arcobacter butzleri RM4018]
gi|189082951|sp|A8ERI7|MURI_ARCB4 RecName: Full=Glutamate racemase
gi|157698401|gb|ABV66561.1| glutamate racemase [Arcobacter butzleri RM4018]
Length = 261
Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 66/229 (28%), Positives = 106/229 (46%), Gaps = 6/229 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ +FDSG+GGL VL+ + ++ Y+AD PYG + + KR + + +L +
Sbjct: 2 KVGVFDSGLGGLTVLKSILKVLKNAEIFYIADTAYAPYGEKDSALILKRCEDITNYLLKE 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
Y+ ++ACNTA + LR F S+ +G P IK A T+S I IL+TP+TL+
Sbjct: 62 YKIDALIVACNTATSAAIKHLRDNFSSLIVIGTEPGIKPAILNTKSSNIGILATPSTLKS 121
Query: 135 TYTSNLIHSYVSQCHI--HLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
L++ S + + LA ++E+ K +E I +
Sbjct: 122 DKYQLLVNELSSIKKVNLFEQACPGLAMQIEKGEINTLTT----YKMLEEWLIPMKEANV 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
D IVL CTHYPLI +++ + + D+IA+R L
Sbjct: 178 DTIVLGCTHYPLISQTIKKIMGEDITLIQTGDAIAKRLLSLSEEKGHKN 226
>gi|225619324|ref|YP_002720550.1| glutamate racemase [Brachyspira hyodysenteriae WA1]
gi|225214143|gb|ACN82877.1| glutamate racemase [Brachyspira hyodysenteriae WA1]
Length = 279
Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 63/274 (22%), Positives = 116/274 (42%), Gaps = 17/274 (6%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M ID+ I +FDSG+GGL VL+K+ +MP +++Y+ D+ PYG+ +
Sbjct: 1 MNIDSLSSNM----PIAVFDSGLGGLTVLKKLIEMMPNENYVYIGDNANIPYGDKSKEEI 56
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+ +D L + + + +IACNT D L+ + A+ A T++
Sbjct: 57 INLTLK-MTDFLVEQKCKMIIIACNTITACSYDILKQKYHIPVIEVISNAVIDALDKTKN 115
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
ISI++T T+ N I + Q + + L +E + + + +K +
Sbjct: 116 NNISIMATEFTVNSNIYKNKIIEFNKQAKVTQTACKDLCPMIENDWYSYENRLEILKNYL 175
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS-----PWPVDWLDNSDSIARRARCLLP 235
E K +D ++L CTHYP I++ ++L + +D S A A+ L
Sbjct: 176 EN-----IDKNSDTLILGCTHYPHIINDIKKLLENGIINSINNIIDPSYHTAISAKEYLK 230
Query: 236 RINTHQTRVFDD--HALFLSGKPDIAMRRLMQGF 267
N ++ +F + K + + +
Sbjct: 231 NNNLLSDNKIENSKTIIFSTEKSEKINKLINMLL 264
>gi|326570331|gb|EGE20375.1| glutamate racemase [Moraxella catarrhalis BC1]
Length = 285
Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 72/267 (26%), Positives = 111/267 (41%), Gaps = 16/267 (5%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ I IFDSG+GGL V + + LMP+ ++Y AD PYGN + +
Sbjct: 10 NPQKSAPIGIFDSGVGGLSVYRHLSELMPKERYVYYADTQNLPYGNKSGDEILFLTLQAV 69
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
L + L VIACN+A LR + +G VPA+K A +Q+ I++L+T
Sbjct: 70 D-WLCRQGCKLIVIACNSASAYSLTTLR-IRCRIPIVGLVPAVKPACEMSQTRQIALLAT 127
Query: 129 PATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
ATL+ + +IH +H +L VE D + K+ + + +
Sbjct: 128 QATLQGQLLAQVIHKVATSKGITVHKHFEPMLVPWVESGMPINHHVADLLIKQTQAWYQQ 187
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSDSIARRARCLLPRINTHQTR 243
D++VL CTHYP + + LD+ +IA+R + LL
Sbjct: 188 ----GVDILVLGCTHYPFFRQFLQDWIDEQHITMTLLDSGAAIAQRVKSLLDCFGISADG 243
Query: 244 V--FDDHALFLSGKPDIA---MRRLMQ 265
+ + S D RRL Q
Sbjct: 244 DVLDEPLTFYASDLTDNVPATARRLSQ 270
>gi|312870481|ref|ZP_07730601.1| glutamate racemase [Lactobacillus oris PB013-T2-3]
gi|311094038|gb|EFQ52362.1| glutamate racemase [Lactobacillus oris PB013-T2-3]
Length = 266
Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 50/255 (19%), Positives = 100/255 (39%), Gaps = 6/255 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL VL+ +R +P+ ++V D FPYG +++ + + L
Sbjct: 3 RRPIGVMDSGLGGLSVLRVLRRELPDESLLFVGDQGHFPYGTKTQAEVRRLALAI-GRFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ L V+ACNTA L + +G + AA T I ++ T +T+
Sbjct: 62 VRHDAKLMVVACNTATGAALPAL-QAALPIPVIGVIRPGASAALATNPRTIGVIGTDSTI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ +H + + L S VE G ++ ++ +
Sbjct: 121 KNGAYERTLHELQPAVQVVSQPAQPLVSIVEHGQTG----TPAAQQAVDKVLQCFATQPV 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
+ ++L CTH+P + ++ V +D + + + +L + AL+
Sbjct: 177 ETLILGCTHFPFLSREIQRRLGPSVHLIDPAYETGQTVKQVLTDKHLLAAGGQQRTALYT 236
Query: 253 SGKPDIAMRRLMQGF 267
+G+ +
Sbjct: 237 TGRIADLQAGADKWL 251
>gi|300310872|ref|YP_003774964.1| glutamate racemase [Herbaspirillum seropedicae SmR1]
gi|300073657|gb|ADJ63056.1| glutamate racemase protein [Herbaspirillum seropedicae SmR1]
Length = 297
Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 65/268 (24%), Positives = 113/268 (42%), Gaps = 14/268 (5%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P +I IFDSGIGGL VL+ + +P +Y AD PYG+ + + +R +
Sbjct: 21 PMPTAADAAIGIFDSGIGGLSVLRHIHAALPREQLLYFADSGYAPYGDKTEAQIVERSLA 80
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
+ S L + + V+ACNTA +R+ +P + +G P +K AA T+S + +L
Sbjct: 81 IAS-FLLEQRVKALVVACNTATAAAIQAIRTRWPQLLVVGIEPGLKPAAQLTRSRTVGVL 139
Query: 127 STPATLRRTYTSNLIHSYVSQCHIH--LVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+T +TL + L +Q + + + L +E+ + + +E
Sbjct: 140 ATRSTLASQRFALLQAQMQAQYQVRYLPQACVGLVDLIEKGE----LHSPATVQLLERYL 195
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQL----SPWPVDWLDNSDSIARRARCLLPRINTH 240
+ D +VL CTHYP + + D +D ++ R+ + LL
Sbjct: 196 APLLEQGADTLVLGCTHYPFVRPAIESVCKSLVGETPDIIDTGQAVTRQLQRLLEAGQLQ 255
Query: 241 QTRVFDDHALFLSGKP---DIAMRRLMQ 265
A F + + A R L++
Sbjct: 256 TGAASGSLAGFTTASRSTLENAFRGLLK 283
>gi|310642114|ref|YP_003946872.1| glutamate racemase 2 [Paenibacillus polymyxa SC2]
gi|309247064|gb|ADO56631.1| Glutamate racemase 2 [Paenibacillus polymyxa SC2]
Length = 262
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 63/253 (24%), Positives = 115/253 (45%), Gaps = 9/253 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSGIGG+ VL ++P ++Y AD + PYG+ +KK ++ + +
Sbjct: 3 IGFFDSGIGGITVLHDTLKVLPNEDYMYYADTLNVPYGHKTKDEVKKYVLNAIE-FISQQ 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--STPATLR 133
+ VIACNTA + +E+R + S+ +G PA+K A ++ +L +T TLR
Sbjct: 62 KVKAIVIACNTATSAAIEEIRGKY-SIPIIGMEPAVKPAVKSKKNIDKRVLVTATALTLR 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
NLI ++ + L+ L E + E + ++ + + +
Sbjct: 121 EERLQNLITKLDNEHVVDLLPLPKLVQFAESFEFN----EQIVLPYLQEQLSIYDLSKYE 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
IVL CTH+ +FR+L V+ +D ++ A+ + +L +N+ + + + S
Sbjct: 177 TIVLGCTHFSYYKDIFRKLFSSDVNIIDGNNGTAKNLKKVLEEMNSL-DEGNGNISFYCS 235
Query: 254 GKPDIAMRRLMQG 266
G +L +
Sbjct: 236 GVKVEDKAKLKEF 248
>gi|326578047|gb|EGE27911.1| glutamate racemase [Moraxella catarrhalis O35E]
Length = 285
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 72/268 (26%), Positives = 111/268 (41%), Gaps = 16/268 (5%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ I IFDSG+GGL V + + LMP+ ++Y AD PYGN + +
Sbjct: 9 INPQKSAPIGIFDSGVGGLSVYRHLSELMPKERYVYYADTQNLPYGNKSGDEILFLTLQA 68
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
L + L VIACN+A LR + +G VPA+K A +Q+ I++L+
Sbjct: 69 VD-WLCRQGCKLIVIACNSASAYSLTTLR-IRCRIPIVGLVPAVKPACEMSQTRQIALLA 126
Query: 128 TPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
T ATL+ + +IH +H +L VE D + K+ + +
Sbjct: 127 TQATLQGQLLAQVIHEVATSKGVTVHKHFEPMLVPWVESGMPINHHVADLLIKQTQAWYQ 186
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSDSIARRARCLLPRINTHQT 242
+ D++VL CTHYP + + LD+ +IA+R + LL
Sbjct: 187 Q----GVDILVLGCTHYPFFRQFLQDWIDEQHITMTLLDSGAAIAQRVKSLLDCFGISAD 242
Query: 243 RV--FDDHALFLSGKPDIA---MRRLMQ 265
+ + S D RRL Q
Sbjct: 243 GDVLDEPLTFYASDLTDNVPATARRLSQ 270
>gi|294795084|ref|ZP_06760219.1| glutamate racemase [Veillonella sp. 3_1_44]
gi|294454446|gb|EFG22820.1| glutamate racemase [Veillonella sp. 3_1_44]
Length = 272
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 57/256 (22%), Positives = 106/256 (41%), Gaps = 7/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q I +FDSG+GGL VL+ ++ P FIY+ D+ P GN D + + L
Sbjct: 11 QLPIGVFDSGVGGLSVLKVLQEQFPNEDFIYIGDNANNPVGNRSDDEITYLACRIAE-TL 69
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+K L VIACNT + D +R S+ +G +K A ++S I I++T AT+
Sbjct: 70 EKQPVKLMVIACNTFTVVALDAVRELV-SVPVIGVSQGVKTAINKSKSKTIGIMATVATV 128
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
++ + + LA +E+ + + +++ + +
Sbjct: 129 NSHIHKHVALEVDHEVLVWEQPCPELAGLIEQ----GHLDDYFVREVCKDYLEPLLSREI 184
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALF 251
+V+VL CTH+P + + +L+ + ++D + + R L N + L
Sbjct: 185 EVVVLGCTHFPFVQPLLEELTSCRIQFIDPAFETSELVRHRLESKNLFNPQDTVGTVTLC 244
Query: 252 LSGKPDIAMRRLMQGF 267
+ ++
Sbjct: 245 FTKDVELGDALSASFL 260
>gi|326569565|gb|EGE19619.1| glutamate racemase [Moraxella catarrhalis BC8]
Length = 285
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 72/268 (26%), Positives = 111/268 (41%), Gaps = 16/268 (5%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ I IFDSG+GGL V + + LMP+ ++Y AD PYGN + +
Sbjct: 9 INPQKSAPIGIFDSGVGGLSVYRHLSELMPKERYVYYADTQNLPYGNKSGDEILFLTLQA 68
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
L + L VIACN+A LR + +G VPA+K A +Q+ I++L+
Sbjct: 69 VD-WLCRQGCKLIVIACNSASAYSLTTLR-IRCRIPIVGLVPAVKPACEMSQTRQIALLA 126
Query: 128 TPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
T ATL+ + +IH +H +L VE D + K+ + +
Sbjct: 127 TQATLQGQLLAEVIHEVATSKGVTVHKHFEPMLVPWVESGMPINHHVADLLIKQTQAWYQ 186
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSDSIARRARCLLPRINTHQT 242
+ D++VL CTHYP + + LD+ +IA+R + LL
Sbjct: 187 Q----GVDILVLGCTHYPFFRQFLQDWIDEQHITMTLLDSGAAIAQRVKSLLDCFGISAD 242
Query: 243 RV--FDDHALFLSGKPDIA---MRRLMQ 265
+ + S D RRL Q
Sbjct: 243 GDVLDEPLTFYASDLTDNVPATARRLSQ 270
>gi|258647676|ref|ZP_05735145.1| glutamate racemase [Prevotella tannerae ATCC 51259]
gi|260852505|gb|EEX72374.1| glutamate racemase [Prevotella tannerae ATCC 51259]
Length = 285
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 59/257 (22%), Positives = 111/257 (43%), Gaps = 11/257 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GG+ +L++ + L+P+Y ++Y+ D+ PYG+ + + + L K
Sbjct: 11 PIGVFDSGYGGMTILRQFKRLLPQYDYLYLGDNARAPYGSHSFEVIYQYTLEAVEA-LFK 69
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ACNTA L +++L + +P LG + P ++ A TQS I +L T
Sbjct: 70 RGCPLVILACNTASAKALRTLQQNDLPARYPDRRVLGVIRPTVETVAGLTQSHHIGLLGT 129
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+ + + ++ + VE Y + ++K ++ F
Sbjct: 130 VGTISSGSYTMEFAKIDPSAKLTGMACPMWVPLVENYEFDSPGADYFVRKRLDALFES-- 187
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF--D 246
+ D ++L CTHYPL++ Q +P V ++ +A + + L R + R+
Sbjct: 188 DPQIDTLILGCTHYPLLLEKISQFTPPNVKIVEQGAYVAEKLQDYLQRHPEMEVRLSRQG 247
Query: 247 DHALFLSGKPDIAMRRL 263
+ D
Sbjct: 248 RSKYLTTESVDKFDEAA 264
>gi|167590293|ref|ZP_02382681.1| glutamate racemase [Burkholderia ubonensis Bu]
Length = 277
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 66/253 (26%), Positives = 108/253 (42%), Gaps = 8/253 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +F+SG+GGL V++ +R +P +Y+AD PYG D ++ R L L +
Sbjct: 11 PIGVFNSGLGGLSVVEAIRQRLPGEALLYIADSRYAPYGEKSDAFIRARSQALTD-WLVQ 69
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ VIACNTA T LR+ F ++ +G P IK A + S ++ +L+T ATLR
Sbjct: 70 NSAKMLVIACNTATTHAIAHLRTQF-AIPIIGVEPGIKPAMQASASKVVGVLATAATLRS 128
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
L+ C + L R+E+ + I+ +E + D
Sbjct: 129 QRLRALLAENDHACRFVCQAGHGLVERIEQGEAAGSV----IESLLEAYLTPMIDEGADT 184
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HALFL 252
+VL THY L++ R++ ++ + +IARR L H + L
Sbjct: 185 LVLGSTHYALLMPSIRRIFGSRFRLIETATAIARRVDHQLAEYRLHNDANPANAPLQLCS 244
Query: 253 SGKPDIAMRRLMQ 265
+ L +
Sbjct: 245 TATSAEQRAPLAR 257
>gi|257464953|ref|ZP_05629324.1| glutamate racemase [Actinobacillus minor 202]
gi|257450613|gb|EEV24656.1| glutamate racemase [Actinobacillus minor 202]
Length = 253
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 73/251 (29%), Positives = 125/251 (49%), Gaps = 6/251 (2%)
Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82
+GGL + ++R ++P H++Y D+ FPY + AL +R + + I +K L V+
Sbjct: 1 MGGLTIYDEVRKVLPNAHYLYCFDNAFFPYSERSEQALIERAVKIVQKIAEKQPLDLVVV 60
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA T++ LR F +G VPAIK AAA +++ I +L+T T++R Y +LIH
Sbjct: 61 ACNTASTVVLPALREHF-DFPIVGTVPAIKPAAAISKTKTIGLLATVGTIKRPYVLDLIH 119
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
Y C + + + + E + +K+ +E D ++L CTH+
Sbjct: 120 RYAKDCQVEKIGNTQIVELAETKLLTGTVDLPSLKECVEPWL---NHPSLDTVILGCTHF 176
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRR 262
PL+ +QL P ++D+ ++IA+R + LL + H ++ F + + R
Sbjct: 177 PLLKEELKQLLPQVTYFVDSGEAIAKRVQSLLLENHHHSQEKERENTAFCTELTENFKNR 236
Query: 263 --LMQGFGLKS 271
+M G KS
Sbjct: 237 EVMMHKLGFKS 247
>gi|163781564|ref|ZP_02176564.1| glutamate racemase [Hydrogenivirga sp. 128-5-R1-1]
gi|159882784|gb|EDP76288.1| glutamate racemase [Hydrogenivirga sp. 128-5-R1-1]
Length = 255
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 56/253 (22%), Positives = 102/253 (40%), Gaps = 15/253 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ +FDSG+GGL VL+ +R P Y+ D PYG + + + ++ L +
Sbjct: 3 VGVFDSGVGGLTVLKAIREKFPRIDLFYLGDTARVPYGTKSPDTVIRYSVE-CAEFLSEK 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA + + L S P +++A + T+ + ++ T AT+R
Sbjct: 62 SVDVLVVACNTASSYALETLTSMLTIPVLGVVEPGVRKALSLTKGR-VGVIGTSATIRSE 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ + + + + VEE I E + +E E K D +
Sbjct: 121 AYQHRLREAGV--EVFSKACPLFVPLVEEGLVEGDITE----RVVEFYLKEFREKGIDTL 174
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYPL+ + + + +D+SD++A L+ LF + +
Sbjct: 175 ILGCTHYPLLKNTIKNFL-KGTEVVDSSDAVAEELSSLVE------DEGQGAIELFFTDR 227
Query: 256 PDIAMRRLMQGFG 268
+ G
Sbjct: 228 SQNLEGLIELILG 240
>gi|326573641|gb|EGE23600.1| glutamate racemase [Moraxella catarrhalis CO72]
Length = 285
Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 73/267 (27%), Positives = 111/267 (41%), Gaps = 16/267 (5%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ I IFDSG+GGL V + + LMP+ ++Y AD PYGN + +
Sbjct: 10 NPQKSAPIGIFDSGVGGLSVYRHLSELMPKERYVYYADTQNLPYGNKSGDEILFLTLQAV 69
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
L + L VIACN+A LR + +G VPA+K A +Q+ I++L+T
Sbjct: 70 D-WLCRQGCKLIVIACNSASAYSLTTLR-IRCRIPIVGLVPAVKPACEMSQTRQIALLAT 127
Query: 129 PATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
ATL+ + +IH +H +L VE D + K+ + + +
Sbjct: 128 QATLQGQLLAQVIHKVATSKGVTVHKHFEPMLVPWVESGMPINHHVADLLIKQTQAWYQQ 187
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSDSIARRARCLLPRINTHQTR 243
D++VL CTHYP + + LD+ +IA+R R LL
Sbjct: 188 ----GVDILVLGCTHYPFFRQFLQDWIDEQHITMTLLDSGAAIAQRVRSLLDCFGISADG 243
Query: 244 V--FDDHALFLSGKPDIA---MRRLMQ 265
+ + S D RRL Q
Sbjct: 244 DVLDEPLTFYASDLTDNVPATARRLSQ 270
>gi|146329274|ref|YP_001208944.1| glutamate racemase [Dichelobacter nodosus VCS1703A]
gi|146232744|gb|ABQ13722.1| glutamate racemase [Dichelobacter nodosus VCS1703A]
Length = 264
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 60/251 (23%), Positives = 115/251 (45%), Gaps = 5/251 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I +FDSG+GG + + +P+ I+ AD+ PYG+ + + +
Sbjct: 2 NNAPIGLFDSGVGGTSIWCAVCAELPQESTIFWADNAHAPYGDKSPAEIIELAARNTEQL 61
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + + +IACNTA LR+ + ++ F+ PAIK AA T++G + +L+T +T
Sbjct: 62 LSR-GCKMIIIACNTASAHAAAILRTRY-NVPFVAVEPAIKPAALATKTGAVGVLATTST 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L N + +V + + VE G +++ ++ + +
Sbjct: 120 LMSAAFQNTVTRWVDTQKNVRLIARSGRGIVELIESG-QMESANMRALLAAHAQAFRAEH 178
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHAL 250
D +VL CTHYP + + ++L P V +D+ ++AR++R +L + + V H
Sbjct: 179 IDQLVLGCTHYPYLRPLLQELLPA-VSIIDSGAAVARQSRRILAQWDLLNDGVMPARHQC 237
Query: 251 FLSGKPDIAMR 261
F + + + +
Sbjct: 238 FCTAESAVLSQ 248
>gi|260752377|ref|YP_003225270.1| glutamate racemase [Zymomonas mobilis subsp. mobilis NCIMB 11163]
gi|258551740|gb|ACV74686.1| glutamate racemase [Zymomonas mobilis subsp. mobilis NCIMB 11163]
Length = 276
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 85/222 (38%), Positives = 128/222 (57%), Gaps = 1/222 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + +L FDSG+GGL VL ++ +PE +YVAD+ GFPYG + + R+ L +
Sbjct: 1 MSHPVLFFDSGVGGLSVLAAVKKALPEAPILYVADNGGFPYGTKSEEEIATRVPALLGRL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+++Y P L VIACNTA T+ +RS + +G VPAIK AA ++S + +L T AT
Sbjct: 61 VERYDPALLVIACNTASTIALPFIRSAL-QIPVVGTVPAIKPAALLSKSHVFGVLGTEAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R+ Y +L + S C + S L + E G K ++E++ + EG R
Sbjct: 120 IRQPYVDHLSEEFASDCTVIRQGSANLVTLAEAKLRGEKSDLALYREELDRLLQQPEGDR 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
DV+VLACTH+PL+ +SP P+ ++D S+ IARRAR L
Sbjct: 180 IDVVVLACTHFPLVKEELEAVSPRPLLFIDGSEGIARRARYL 221
>gi|326563047|gb|EGE13321.1| glutamate racemase [Moraxella catarrhalis 103P14B1]
gi|326577286|gb|EGE27174.1| glutamate racemase [Moraxella catarrhalis 101P30B1]
Length = 285
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 73/267 (27%), Positives = 111/267 (41%), Gaps = 16/267 (5%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ I IFDSG+GGL V + + LMP+ ++Y AD PYGN + +
Sbjct: 10 NPQKSAPIGIFDSGVGGLSVYRHLSELMPKERYVYYADTQNLPYGNKSGDEILFLTLQAV 69
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
L + L VIACN+A LR + +G VPA+K A +Q+ I++L+T
Sbjct: 70 D-WLCRQGCKLIVIACNSASAYSLTTLR-IRCRIPIVGLVPAVKPACEMSQTRQIALLAT 127
Query: 129 PATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
ATL+ + +IH +H +L VE D + K+ + + +
Sbjct: 128 QATLQGQLLAEVIHEVATSKGVTVHKHFEPMLVPWVESGMPINHHVADLLIKQTQAWYQQ 187
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSDSIARRARCLLPRINTHQTR 243
D++VL CTHYP + + LD+ +IA+R R LL
Sbjct: 188 ----GVDILVLGCTHYPFFRQFLQDWIDEQHITMTLLDSGAAIAQRVRSLLDCFGISADG 243
Query: 244 V--FDDHALFLSGKPDIA---MRRLMQ 265
+ + S D RRL Q
Sbjct: 244 DVLDEPLTFYASDLTDNVPATARRLSQ 270
>gi|72381894|ref|YP_291249.1| glutamate racemase [Prochlorococcus marinus str. NATL2A]
gi|123621455|sp|Q46LT2|MURI_PROMT RecName: Full=Glutamate racemase
gi|72001744|gb|AAZ57546.1| glutamate racemase [Prochlorococcus marinus str. NATL2A]
Length = 265
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 57/254 (22%), Positives = 107/254 (42%), Gaps = 11/254 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGG VL+K+ L P FIY+AD PYG + +KK + S
Sbjct: 3 IGLFDSGIGGFTVLKKVIKLCPNNSFIYLADTARLPYGIKTTNEIKKIAEEISSWFRY-Q 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ ++ACNT + D L+ I AA+ Q + +L+TP+T++
Sbjct: 62 KIDAFLVACNTTNAIALDILKKNLDIP----VFDLIGSAASTIQESRVGVLATPSTVKTK 117
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+N I + + + +E I D+I G ++ +
Sbjct: 118 AYTNAILEFKPKTFVIEQPCPAFVPMIEM----DNINSDDITDVATGYLQPLLKQKIHSL 173
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHALFLS 253
+L C+HYPLI R++ P V +D +++++ + + + ++ ++ + D +++
Sbjct: 174 ILGCSHYPLIAPSLRKVLPSSVKLIDPAEALSFKLKLFIDSKTSNYSKNKNFVDLKFYVT 233
Query: 254 GKPDIAMRRLMQGF 267
+
Sbjct: 234 SNLKHFPNKAKHWL 247
>gi|15896495|ref|NP_349844.1| glutamate racemase [Clostridium acetobutylicum ATCC 824]
gi|20177983|sp|Q97E66|MURI_CLOAB RecName: Full=Glutamate racemase
gi|15026324|gb|AAK81184.1|AE007821_1 Possible glutamate racemase [Clostridium acetobutylicum ATCC 824]
gi|325510654|gb|ADZ22290.1| glutamate racemase [Clostridium acetobutylicum EA 2018]
Length = 256
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 63/256 (24%), Positives = 106/256 (41%), Gaps = 7/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
N I + DSG+GG+ VL++ +P +FIY D PYG ++ + L
Sbjct: 5 NNPIGVIDSGVGGISVLKEAVKQLPYENFIYYGDSKNAPYGIKSVDEVRNLTFNVVEK-L 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K V+ACNTA + DELR + ++ +G PA+K A + G I I++TP TL
Sbjct: 64 LKLNIKALVVACNTATSAAIDELREKYKNIPVIGIEPALKPAVELKRRGKIIIMATPMTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
NL+ Y I + L +E ++ +++++ + F + E
Sbjct: 124 SEVKFKNLMEKYEKDSEIVKLPCPGLVELIE----DGIVEGEKMQEYLRNKFKDYEKDDI 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251
VL CTHYP + ++ V +D S + + L + + +
Sbjct: 180 AAFVLGCTHYPFVKKEIASIA-RDVPIIDGSQGTVMQLKRKLDKYDILNIGSEKGKIKIM 238
Query: 252 LSGKPDIAMRRLMQGF 267
S K D + +
Sbjct: 239 NSLKDDKILDLSHRLL 254
>gi|317060877|ref|ZP_07925362.1| glutamate racemase [Fusobacterium sp. D12]
gi|313686553|gb|EFS23388.1| glutamate racemase [Fusobacterium sp. D12]
Length = 261
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 59/242 (24%), Positives = 106/242 (43%), Gaps = 6/242 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSGIGGL VL + ++P+ +FIY AD PYG + K L +
Sbjct: 2 KIGVFDSGIGGLSVLHQAMQMLPQENFIYYADIDHVPYGTKTKEEIIKYSSEAVE-FLVQ 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
VIACNTA + ELR + ++ +G PA+K+A + + +++TP T++
Sbjct: 61 KGVKAIVIACNTATSAAIQELREKY-TLPIIGMEPAVKKAIDFHPKKRVLVIATPMTIQG 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
NLI ++ + V+ L + +E+E+ + + +
Sbjct: 120 EKLHNLIEKVDTEHLVDAVALPKLVTFA----EEENFEEEEVTEYLREALKHFNLENYSS 175
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VL CTH+ +++ P V +LD ++ ++ L + + + SG
Sbjct: 176 VVLGCTHFNYFKDSLKKMLPKGVHFLDGNEGTIKKLISELEKRKALEKNSSRKIEYYYSG 235
Query: 255 KP 256
+
Sbjct: 236 RK 237
>gi|296112421|ref|YP_003626359.1| glutamate racemase MurI [Moraxella catarrhalis RH4]
gi|295920115|gb|ADG60466.1| glutamate racemase MurI [Moraxella catarrhalis RH4]
Length = 285
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 71/268 (26%), Positives = 111/268 (41%), Gaps = 16/268 (5%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ I IFDSG+GGL V + + LMP+ ++Y AD PYGN + +
Sbjct: 9 INPQKSAPIGIFDSGVGGLSVYRHLSELMPKERYVYYADTQNLPYGNKSGDEILFLTLQA 68
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
L + L +IACN+A LR + +G VPA+K A +Q+ I++L+
Sbjct: 69 VD-WLCRQGCKLIIIACNSASAYSLTTLR-IRCRIPIVGLVPAVKPACEMSQTRQIALLA 126
Query: 128 TPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
T ATL+ + +IH +H +L VE D + K+ + +
Sbjct: 127 TQATLQGQLLAEVIHEVATSKGVTVHKHFEPMLVPWVESGMPINHHVADLLIKQTQAWYQ 186
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSDSIARRARCLLPRINTHQT 242
+ D++VL CTHYP + + LD+ +IA+R + LL
Sbjct: 187 Q----GVDILVLGCTHYPFFRQFLQDWIDEQHITMTLLDSGAAIAQRVKSLLDCFGISAD 242
Query: 243 RV--FDDHALFLSGKPDIA---MRRLMQ 265
+ + S D RRL Q
Sbjct: 243 GDVLDEPLTFYASDLTDNVPATARRLSQ 270
>gi|303246204|ref|ZP_07332485.1| glutamate racemase [Desulfovibrio fructosovorans JJ]
gi|302492600|gb|EFL52471.1| glutamate racemase [Desulfovibrio fructosovorans JJ]
Length = 297
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 51/257 (19%), Positives = 98/257 (38%), Gaps = 8/257 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL V + + +P +Y D PYG + + + ++ L
Sbjct: 35 PIGIFDSGVGGLTVARAVMDRLPSESIVYFGDTARVPYGVKSPDTVARYAGQI-TNFLLA 93
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L ++ACNT + + + P+ A A T++ I I++TP+T+
Sbjct: 94 KNVKLLIVACNTMAAVALPAITALSPAPVLEVISAGAASALAATRTKRIGIIATPSTIAS 153
Query: 135 TYTSNLIHS-YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + + + + + VE + + E + D
Sbjct: 154 RAYESALAALGGPEVFTASKACPLFVPLVE----EGWLAHPATRLVAEEYLTPLLAENLD 209
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF--DDHALF 251
++L CTHYPL+ + +++ V D++ ++A RA +L + + H
Sbjct: 210 TLILGCTHYPLLAPLLAEVAGPDVRLQDSATAVAERAAAVLGYLGLAAPKGPDTPRHVFH 269
Query: 252 LSGKPDIAMRRLMQGFG 268
++ P G
Sbjct: 270 VTDMPRKFREIGELFLG 286
>gi|187777456|ref|ZP_02993929.1| hypothetical protein CLOSPO_01023 [Clostridium sporogenes ATCC
15579]
gi|187774384|gb|EDU38186.1| hypothetical protein CLOSPO_01023 [Clostridium sporogenes ATCC
15579]
Length = 260
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 66/260 (25%), Positives = 115/260 (44%), Gaps = 7/260 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I FDSG+GG+ VL++ L+P+ F+Y D PYG + +K F +D
Sbjct: 7 NDKPIGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEVKALT-FNATDF 65
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP T
Sbjct: 66 LMNKGIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMT 124
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L +NL+ Y I + L +E+ + D I ++ F + + ++
Sbjct: 125 LAEKKFANLMDLYKETEDIEPLPCPGLPELIEQGI----VSGDVIYNYLKDKFSKYDNEK 180
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHAL 250
IVL CTHYP + ++++ +D S ++ + L N + +
Sbjct: 181 ISSIVLGCTHYPFVEETLKEVTHNKACIIDGSLGTSKELKRQLEDRNMLRKESRIGKVTI 240
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
F S + + + F +K
Sbjct: 241 FNSKEDKDIVDLSYKLFNMK 260
>gi|257463297|ref|ZP_05627695.1| glutamate racemase [Fusobacterium sp. D12]
Length = 274
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 59/242 (24%), Positives = 106/242 (43%), Gaps = 6/242 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSGIGGL VL + ++P+ +FIY AD PYG + K L +
Sbjct: 15 KIGVFDSGIGGLSVLHQAMQMLPQENFIYYADIDHVPYGTKTKEEIIKYSSEAVE-FLVQ 73
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
VIACNTA + ELR + ++ +G PA+K+A + + +++TP T++
Sbjct: 74 KGVKAIVIACNTATSAAIQELREKY-TLPIIGMEPAVKKAIDFHPKKRVLVIATPMTIQG 132
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
NLI ++ + V+ L + +E+E+ + + +
Sbjct: 133 EKLHNLIEKVDTEHLVDAVALPKLVTFA----EEENFEEEEVTEYLREALKHFNLENYSS 188
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VL CTH+ +++ P V +LD ++ ++ L + + + SG
Sbjct: 189 VVLGCTHFNYFKDSLKKMLPKGVHFLDGNEGTIKKLISELEKRKALEKNSSRKIEYYYSG 248
Query: 255 KP 256
+
Sbjct: 249 RK 250
>gi|310659702|ref|YP_003937423.1| glutamate racemase [Clostridium sticklandii DSM 519]
gi|308826480|emb|CBH22518.1| glutamate racemase [Clostridium sticklandii]
Length = 274
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 70/256 (27%), Positives = 115/256 (44%), Gaps = 13/256 (5%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
MK+ N K+ + I FDSGIGGL VL K +MP +IY AD PYG +
Sbjct: 1 MKMSN----KEERYKIGFFDSGIGGLTVLHKALEMMPLEDYIYYADTENQPYGIKTKAEV 56
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT-- 118
++ + I+ K V+ACNTA ++ ++LR + + +G PA+K A YT
Sbjct: 57 RELVFKAMDFIVSK-NVKAIVVACNTATSVAIEDLRKKY-DIPIIGMEPAVKPAVRYTDI 114
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
++ + + +T TL+ NLI + S+ + L+ L E E I K
Sbjct: 115 ENKKVLVTATKLTLKEEKLHNLISALDSESIVDLLELQELVQFAERL----DFDETRITK 170
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+E F E + K +VL CTH+ + ++L + +D ++ R + +L
Sbjct: 171 YLENQFKEIDLKDYQTLVLGCTHFIFFKDMIQKLVTKEISIIDGNEGTIRHLQNILRTKK 230
Query: 239 THQTRVFDDHALFLSG 254
+ + + SG
Sbjct: 231 SLN-QGSGKVEFYNSG 245
>gi|291288784|ref|YP_003505600.1| glutamate racemase [Denitrovibrio acetiphilus DSM 12809]
gi|290885944|gb|ADD69644.1| glutamate racemase [Denitrovibrio acetiphilus DSM 12809]
Length = 256
Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats.
Identities = 55/246 (22%), Positives = 95/246 (38%), Gaps = 10/246 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I IFDSG+GGL V + + PE Y+ D PYG+ + + ++D
Sbjct: 2 AIGIFDSGVGGLTVYKTISEHFPELDMHYLGDTARVPYGSRSQETVINYSLQCAGFLVDN 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ ++ACNTA + D +R F P A T++ I ++ T AT+R
Sbjct: 62 FDIDTIIVACNTASSYAIDHIRKKFKVNVIGVVEPGSYSALQVTENNKIGVIGTRATVRS 121
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + S I + + VEE + D + D
Sbjct: 122 GSYVKALKAIRSDVEITQTACPLFVPIVEEML----VDTDIADMVVRHYLDNMMTTGADT 177
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
++L CTHYPL+ +V + P + +D+S++I L ++L+
Sbjct: 178 LILGCTHYPLLKNVIAKFYP-DIKIVDSSEAIIDCINEL-----KLNVNQHSKREIYLTD 231
Query: 255 KPDIAM 260
+
Sbjct: 232 ESPAFE 237
>gi|291280169|ref|YP_003497004.1| glutamate racemase [Deferribacter desulfuricans SSM1]
gi|290754871|dbj|BAI81248.1| glutamate racemase [Deferribacter desulfuricans SSM1]
Length = 253
Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats.
Identities = 59/246 (23%), Positives = 98/246 (39%), Gaps = 11/246 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I +FDSGIGGL V + + P+ Y D PYG + K ++
Sbjct: 2 AIGVFDSGIGGLTVFRTIAKEFPKLDIYYFGDTARVPYGIRSKDTIIKYTTECIDYLVKH 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
Y VIACN+A + D L+ F P ++ A T++ I ++ T AT+
Sbjct: 62 YNLEAIVIACNSASSYAIDSLKIKFNLPVLGVIDPGVRAALTTTKTNNILVIGTKATVNS 121
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
N I+ I+ + + VEE K+ E +K+ + + D
Sbjct: 122 NAYPNKINQISPLTKIYQQACPLFVPIVEEGLFNHKVAETMVKEYLSPYIDK-----IDT 176
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
++L CTHYPL+ +L P ++ +D+S +I R L + ++
Sbjct: 177 VILGCTHYPLLKETISKLYP-DLNLVDSSIAILDDLRNL-----QITFNESGKRLIHITD 230
Query: 255 KPDIAM 260
K
Sbjct: 231 KTQSFE 236
>gi|153937979|ref|YP_001392916.1| glutamate racemase [Clostridium botulinum F str. Langeland]
gi|166231035|sp|A7GJF6|MURI_CLOBL RecName: Full=Glutamate racemase
gi|152933875|gb|ABS39373.1| glutamate racemase [Clostridium botulinum F str. Langeland]
gi|295320892|gb|ADG01270.1| glutamate racemase [Clostridium botulinum F str. 230613]
Length = 257
Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats.
Identities = 68/260 (26%), Positives = 115/260 (44%), Gaps = 7/260 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I FDSG+GG+ VL++ L+P+ F+Y D PYG + +K F +D
Sbjct: 4 NDKPIGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEVKALT-FNATDF 62
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP T
Sbjct: 63 LMNKGIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELNKGGKIIIMATPMT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L +NL+ Y I + L +E+ + D I ++ F + + ++
Sbjct: 122 LAEKKFANLMDLYKETEDIEPLPCPGLPELIEQGI----VSGDVIYNYLKDKFSKYDNEK 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHAL 250
IVL CTHYP I ++++ +D S +R + L N + +
Sbjct: 178 ISSIVLGCTHYPFIEETLKEVTHNKACIIDGSFGTSRELKRQLKNSNMLREENRVGKVTI 237
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
F S + + + F +K
Sbjct: 238 FNSREDKDIIDLSYKLFNMK 257
>gi|260767618|ref|ZP_05876554.1| glutamate racemase [Vibrio furnissii CIP 102972]
gi|260617518|gb|EEX42701.1| glutamate racemase [Vibrio furnissii CIP 102972]
gi|315178791|gb|ADT85705.1| glutamate racemase [Vibrio furnissii NCTC 11218]
Length = 267
Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats.
Identities = 78/256 (30%), Positives = 135/256 (52%), Gaps = 10/256 (3%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
LIFDSG+GGL V ++++ +P+ + Y+ D+ +PYG L +R+ L ++++ +
Sbjct: 10 LIFDSGVGGLSVYREIQTRLPQVSYTYLFDNAAYPYGELAQETLLQRVDMLVTNLVAQQG 69
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
+ VIACNTA T++ LR+ ++ +G VPAIK A+ + +++TPAT+ R Y
Sbjct: 70 FDIVVIACNTASTIVLPRLRAKL-AIPVVGVVPAIKPASMLAHKA-VGLIATPATITRQY 127
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T +LI + S ++ L+ S L EE G + +E+ + + DV V
Sbjct: 128 THDLIRDFSSDKNVELLGSTRLVDMAEEKLRGKAVDLEELASILSP-----LRQHIDVAV 182
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
L CTH+PLI + + V +D+ ++IARR + LL + T + H++F S P
Sbjct: 183 LGCTHFPLIKEEIQAVLGKDVMLVDSGEAIARRVQDLL-HLETGSMQDEHPHSIFSSAPP 241
Query: 257 --DIAMRRLMQGFGLK 270
+ A+ ++ G
Sbjct: 242 WEEDALNEKLEQLGFS 257
>gi|182416025|ref|YP_001821091.1| glutamate racemase [Opitutus terrae PB90-1]
gi|177843239|gb|ACB77491.1| glutamate racemase [Opitutus terrae PB90-1]
Length = 285
Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats.
Identities = 62/273 (22%), Positives = 102/273 (37%), Gaps = 23/273 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL VL + +P Y ++++AD PYG + + + L
Sbjct: 2 IGVFDSGFGGLTVLASLLKTLPRYDYLFLADSARAPYGARSADVINEFTLEAVE-WLFDQ 60
Query: 76 QPVLSVIACNTAFTLIKDELRS-----TFPSMAFLGAVPAIKQA-------------AAY 117
L V+ACNTA L+ P LG V +A A
Sbjct: 61 GCPLVVLACNTASARALRNLQQLHLPAHRPDRRVLGVVRPSVEALAGLPPGAIPGETAPS 120
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
+G +++L T +T+ + + + + VE E ++
Sbjct: 121 LATGTVAVLGTASTIASDSYAIELQKLAPGLTLIQQPCPMWVPLVEAGELDGPGAEYFLR 180
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237
+ +E ++L CTHYPL++ R+L P V+ LD + +A R L R
Sbjct: 181 RSLEPVLN--RAPLPQRLLLGCTHYPLLLPAIRRLVPASVEILDQGEIVATRLADWLQRH 238
Query: 238 NTHQTRV--FDDHALFLSGKPDIAMRRLMQGFG 268
H+ R+ + P +R + G
Sbjct: 239 RDHEARLTRNGTRRFVTTDDPAWFAQRGEKLLG 271
>gi|332883073|gb|EGK03357.1| glutamate racemase [Dysgonomonas mossii DSM 22836]
Length = 275
Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats.
Identities = 58/261 (22%), Positives = 105/261 (40%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L +++ LMPEY + Y+ D+ PYG + + + L
Sbjct: 6 PIGVFDSGYGGLTILSEIQALMPEYDYCYLGDNSRAPYGARSFEVVYEFTKQAVTA-LFD 64
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ACNTA + + +L + P LG + P + T+S + +L T
Sbjct: 65 MGCNLVILACNTASAKALRTIQQKDLPNMNPDKRVLGIIRPTAEIIGQITRSRHVGVLGT 124
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ I+ + + + VE + + +KK ++ +
Sbjct: 125 VGTIQSQSYPIEINKLFPDIKVTGEACPMWVPLVENNEYESEGADYFVKKNLDNILA--K 182
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH--QTRVFD 246
D+++L CTHYPL++H +++ P V L + IA + L R
Sbjct: 183 DPDIDILILGCTHYPLLLHKIKKILPKEVTALPQGEYIAHSLKDYLRRHPEMDGACTKNG 242
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ F + +
Sbjct: 243 ETHYFTTESSEKFSGAATIFL 263
>gi|90407369|ref|ZP_01215554.1| glutamate racemase [Psychromonas sp. CNPT3]
gi|90311520|gb|EAS39620.1| glutamate racemase [Psychromonas sp. CNPT3]
Length = 271
Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats.
Identities = 82/245 (33%), Positives = 127/245 (51%), Gaps = 6/245 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
ILIFDSG+GGL + +++R + Y++D+ FPYG L +RL+ L +D K+
Sbjct: 6 ILIFDSGVGGLSIFEEIRKKNSKLSCYYLSDNAYFPYGELTKEVLTQRLLCLLTDFTKKH 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L VIACNTA T+ LR F S+ +G VPAIK A T++ +I +++TPAT+ R
Sbjct: 66 PVDLIVIACNTASTIALKTLREHF-SIPIVGVVPAIKPACQLTKNNIIGLIATPATITRE 124
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE--KEGKRTD 193
YTS LI + ++ + ++S L E + I ++K++ F E +R D
Sbjct: 125 YTSLLIDEFATKKQVLTLASTALVKLAERKLSALPIDNMMLQKQLSDIFKEWLMLARRPD 184
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
IVL CTH+PL+ + +D+ +IA+R + LLP + H F +
Sbjct: 185 TIVLGCTHFPLLKADIELCFGGNIQLVDSGGAIAKRVQKLLP---VQCSIGMPQHHAFYT 241
Query: 254 GKPDI 258
K
Sbjct: 242 QKNKQ 246
>gi|167855237|ref|ZP_02478006.1| glutamate racemase [Haemophilus parasuis 29755]
gi|167853601|gb|EDS24846.1| glutamate racemase [Haemophilus parasuis 29755]
Length = 256
Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats.
Identities = 73/250 (29%), Positives = 122/250 (48%), Gaps = 6/250 (2%)
Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82
+GGL + +R +P+ H++Y D+ FPY + L +R + + I + Y + V+
Sbjct: 1 MGGLTIYDAIRENLPDAHYLYCFDNAYFPYSEKSEAVLIERAVGIVQKIAENYPLDMVVV 60
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA T++ LR F +M +G VPAIK AA +Q+ I +L+T T+ R Y LI
Sbjct: 61 ACNTASTVVLPALRERF-AMPIVGTVPAIKPAAQISQTKTIGLLATKGTVTRPYVDELIE 119
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
Y C + + S L VEE + ++K + D ++L CTH+
Sbjct: 120 RYAKDCVVERIGSTDLVEIVEEKQQTGSVDMQRLQKVVAEWQSH---PTLDTVILGCTHF 176
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRR 262
PL+ +QL P ++D+ + IA R LL + + ++ F + + ++R
Sbjct: 177 PLVKEELQQLLPRVSFFVDSGNRIANRVVSLLQDVKRNVNNENKENQAFCTQNSEDFLKR 236
Query: 263 --LMQGFGLK 270
+MQ +G K
Sbjct: 237 EKVMQNWGFK 246
>gi|6980778|pdb|1B73|A Chain A, Glutamate Racemase From Aquifex Pyrophilus
gi|6980779|pdb|1B74|A Chain A, Glutamate Racemase From Aquifex Pyrophilus
Length = 254
Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats.
Identities = 57/254 (22%), Positives = 103/254 (40%), Gaps = 15/254 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL VL+ +R + +Y+ D PYG + + + L
Sbjct: 2 KIGIFDSGVGGLTVLKAIRNRYRKVDIVYLGDTARVPYGIRSKDTIIRYSLECAG-FLKD 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ V+ACNTA + L+ F P +K+A +++ I ++ TPAT++
Sbjct: 61 KGVDIIVVACNTASAYALERLKKEINVPVFGVIEPGVKEALKKSRNKKIGVIGTPATVKS 120
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + + + + A EE + +K +E E +GK D
Sbjct: 121 GAYQRKLEEGGAD--VFAKACPLFAPLAEEGLLEG----EITRKVVEHYLKEFKGK-IDT 173
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
++L CTHYPL+ ++ + +D+S++++ L N + LF +
Sbjct: 174 LILGCTHYPLLKKEIKKFLG-DAEVVDSSEALS------LSLHNFIKDDGSSSLELFFTD 226
Query: 255 KPDIAMRRLMQGFG 268
+ G
Sbjct: 227 LSPNLQFLIKLILG 240
>gi|168181031|ref|ZP_02615695.1| glutamate racemase [Clostridium botulinum NCTC 2916]
gi|182668118|gb|EDT80097.1| glutamate racemase [Clostridium botulinum NCTC 2916]
Length = 257
Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats.
Identities = 68/260 (26%), Positives = 115/260 (44%), Gaps = 7/260 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I FDSG+GG+ VL++ L+P+ F+Y D PYG + +K F +D
Sbjct: 4 NDKPIGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEVKALT-FNATDF 62
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP T
Sbjct: 63 LMNKGIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L +NL+ Y I + L +E+ + D I ++ F + + ++
Sbjct: 122 LAEKKFANLMDLYKETEDIEPLPCPGLPELIEQGI----VSGDIIYNYLKDKFSKYDNEK 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHAL 250
IVL CTHYP I ++++ +D S +R + L N + +
Sbjct: 178 ISSIVLGCTHYPFIEETLKEVTHNKACIIDGSFGTSRELKRQLKNSNMLREENRVGKVTI 237
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
F S + + + F +K
Sbjct: 238 FNSREDKDIIDLSYKLFNMK 257
>gi|322807887|emb|CBZ05462.1| glutamate racemase [Clostridium botulinum H04402 065]
Length = 257
Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats.
Identities = 68/260 (26%), Positives = 115/260 (44%), Gaps = 7/260 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I FDSG+GG+ VL++ L+P+ F+Y D PYG + +K F +D
Sbjct: 4 NDKPIGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEVKALT-FNATDF 62
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP T
Sbjct: 63 LMSKGVKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L +NL+ Y I + L +E+ + D I ++ F + + ++
Sbjct: 122 LAEKKFANLMDLYKETEDIEPLPCPGLPELIEQGI----VSGDVIYNYLKDKFSKYDNEK 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHAL 250
IVL CTHYP I ++++ +D S +R + L N + +
Sbjct: 178 ISSIVLGCTHYPFIEETLKEITHNKACIIDGSFGTSRELKRQLKNSNMLREENRVGKVTI 237
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
F S + + + F +K
Sbjct: 238 FNSREDKDIIDLSYKLFNMK 257
>gi|124025384|ref|YP_001014500.1| putative aspartate and glutamate racemases:glutamate racemase
[Prochlorococcus marinus str. NATL1A]
gi|167017318|sp|A2C175|MURI_PROM1 RecName: Full=Glutamate racemase
gi|123960452|gb|ABM75235.1| Putative aspartate and glutamate racemases:Glutamate racemase
[Prochlorococcus marinus str. NATL1A]
Length = 265
Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats.
Identities = 57/254 (22%), Positives = 107/254 (42%), Gaps = 11/254 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGG VL+K+ L P FIY+AD PYG ++ +KK + S
Sbjct: 3 IGLFDSGIGGFTVLKKVIELCPNNSFIYLADTARLPYGVKTNNEIKKIAEEISSWFRY-Q 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
++ACNT + D +++ I AA+ Q + +L+TP+T+R
Sbjct: 62 NIDAFLVACNTTNAIALDVIKNNLDIP----VFDLIGSAASNIQESRVGVLATPSTVRTK 117
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+N I + + + +E I D+I G ++ +
Sbjct: 118 AYTNAILEFKPKTFVIEQPCPAFVPMIEM----DNINSDDITDVATGYLQPLLKQKIHSL 173
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHALFLS 253
+L C+HYPLI R++ P V +D +++++ + + + + ++ + D +++
Sbjct: 174 ILGCSHYPLITSSLRKVLPSSVKLIDPAEALSFKLKFFIDSKTRNYSKNKNFVDLKFYVT 233
Query: 254 GKPDIAMRRLMQGF 267
+
Sbjct: 234 SNLKNFSNKAKHWL 247
>gi|93007073|ref|YP_581510.1| glutamate racemase [Psychrobacter cryohalolentis K5]
gi|92394751|gb|ABE76026.1| glutamate racemase [Psychrobacter cryohalolentis K5]
Length = 333
Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats.
Identities = 67/279 (24%), Positives = 105/279 (37%), Gaps = 28/279 (10%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSGIGGL V + +P +IY AD + PYGN + +K + L
Sbjct: 47 SAPIGLFDSGIGGLSVYLHLAQQLPNERYIYYADTLNVPYGNRDSDDIKTFTLTAVE-WL 105
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L VIACN+A R +P + +G VPA+K A ++SG +++L+T ATL
Sbjct: 106 YQQGCKLIVIACNSASAYALQTARCHYPQLPIVGLVPALKPAVLASKSGHVAVLATKATL 165
Query: 133 RRTYTSNLIHSYVSQ--CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+++I + S + L VE E + +
Sbjct: 166 NGKLLNDVIATIASPSATRVTKYFDPQLVPWVESGMPE----NSETAQNLRQQLQVFAKD 221
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPW---PVDWLDNSDSIARRARCLLPRINTHQ------ 241
D +VL CTHYP Q + +D+ +IA R + LL N
Sbjct: 222 GVDQLVLGCTHYPFFKDFVMQAIESQRLSMQVVDSGQAIAERVKQLLIANNLSALPIDGL 281
Query: 242 ------------TRVFDDHALFLSGKPDIAMRRLMQGFG 268
++ + + L + G
Sbjct: 282 DRNGVLDASLSDNQIKPPLIFYATKYDKHMDLLLSRLLG 320
>gi|225872661|ref|YP_002754118.1| glutamate racemase [Acidobacterium capsulatum ATCC 51196]
gi|225792605|gb|ACO32695.1| glutamate racemase [Acidobacterium capsulatum ATCC 51196]
Length = 276
Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats.
Identities = 57/255 (22%), Positives = 100/255 (39%), Gaps = 8/255 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL VL+ + +P+ F+Y D PYG + + + ++ L +
Sbjct: 11 IGVFDSGFGGLTVLRALLRELPQAEFLYFGDTARLPYGAKSRETIARYAVS-AAEFLVRQ 69
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
VIACNTA L D+LR+ A A++ SG + +++T AT+
Sbjct: 70 GAEYLVIACNTASALALDDLRAALDIPVLGVVETGANAAQAHSHSGDVLVIATAATVESH 129
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK--RTD 193
+ + + +L VEE + + + + + D
Sbjct: 130 AYATACAERNLRA--VEKACPLLVPLVEEGWIDHPVTREVLSIYFTELMHQSKAAALAPD 187
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++L CTHYPL+ Q P + +D+++ A + ++ Q F +
Sbjct: 188 TLLLGCTHYPLLREPIEQAIPAQIRVIDSAEV---TAAQVAAAVHAPQAGTPAAPRFFAT 244
Query: 254 GKPDIAMRRLMQGFG 268
P R + G
Sbjct: 245 DSPAKFQRLGSRFLG 259
>gi|326202256|ref|ZP_08192125.1| glutamate racemase [Clostridium papyrosolvens DSM 2782]
gi|325987374|gb|EGD48201.1| glutamate racemase [Clostridium papyrosolvens DSM 2782]
Length = 258
Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats.
Identities = 66/245 (26%), Positives = 101/245 (41%), Gaps = 8/245 (3%)
Query: 12 LQ-NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ + I DSG GG+ VL + +P+ ++IY AD PYG +++ +
Sbjct: 1 MNTDKIGFLDSGFGGITVLSEALRQLPQENYIYYADIEHVPYGTKTKEEVREYVFRAVE- 59
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L K V+ACNTA ++ ELR + LG PA+K A + +L+T
Sbjct: 60 FLVKQGIKALVVACNTATSIAVRELRGMY-DFPILGMEPAVKPAVRNGNGKRVLVLATAL 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TLR NL+ + + + L E IK ++EG +E
Sbjct: 119 TLREEKFHNLVQRVDQEHVVDYLPFPELVEMAENMIFDYDSIVPVIKSKLEGFNLE---- 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHA 249
VL CTH+P+ F+++ P VD +D S+ R + LL T
Sbjct: 175 NYKTFVLGCTHFPIYRDAFKKVLPSFVDIIDGSEGTIRYLKRLLEERQLISTNADGGKVV 234
Query: 250 LFLSG 254
F SG
Sbjct: 235 FFDSG 239
>gi|325280786|ref|YP_004253328.1| Glutamate racemase [Odoribacter splanchnicus DSM 20712]
gi|324312595|gb|ADY33148.1| Glutamate racemase [Odoribacter splanchnicus DSM 20712]
Length = 278
Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats.
Identities = 60/269 (22%), Positives = 109/269 (40%), Gaps = 13/269 (4%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
++ + SI +FDSG GGL +L+++ +PEY+++Y+ D+ PYG + +
Sbjct: 1 MEQHKESIGVFDSGYGGLTILKEIVRKLPEYNYVYLGDNARAPYGARSFEVVYEYTREAV 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKD-----ELRSTFPSMAFLGAV-PAIKQAAAYTQSGL 122
L + + L ++ACNTA +L P LG + P+++ Y+Q+G
Sbjct: 61 HK-LFEMECRLVILACNTASAKALRTIQQVDLPQWDPEKRVLGVIRPSVEALNTYSQNGH 119
Query: 123 ISILSTPATLRRTYTSNLI--HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+ IL+T T+ + + I ++ + VE + ++K I
Sbjct: 120 VGILATRGTVASGSYPIEVGKLYGEERFRITQLACPMWVPLVENNELDGEGAIYFVRKYI 179
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ D I+L CTHYPL+ + + P V + +A L R
Sbjct: 180 QELLG--TDPEIDTIILGCTHYPLLRPLIARFVPSRVKIIGQGQIVAGSLADYLKRHPEI 237
Query: 241 QTRVFDDHA--LFLSGKPDIAMRRLMQGF 267
R+ D + K ++ R
Sbjct: 238 DRRLGKDSRRSYLTTEKTELFDRMAGLFL 266
>gi|303239730|ref|ZP_07326254.1| glutamate racemase [Acetivibrio cellulolyticus CD2]
gi|302592667|gb|EFL62391.1| glutamate racemase [Acetivibrio cellulolyticus CD2]
Length = 260
Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats.
Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 9/242 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I FDSGIGG+ VL ++P +IY AD + PYG +KK + + K
Sbjct: 2 KIGFFDSGIGGITVLYDTLKVLPNEDYIYYADTLNVPYGPKPKDEVKKYIFSAID-FIIK 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--STPATL 132
+ VIACNTA ++ +ELR+ + S+ +G PAIK A + +L +T TL
Sbjct: 61 QEVKAVVIACNTATSVAIEELRNKY-SIPIVGMEPAIKPAVEKDRDANKRVLVTATALTL 119
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ NLI ++ + L+ L E+ E+ + ++ + +
Sbjct: 120 KEEKLHNLIAKLDNEHVVDLLPLPGLVQFSEKLEFN----EEIVLPYLKEQLSKYDFNNY 175
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
+ IVL CTH+ +FR+L+ + +D + A + +L +N+ +
Sbjct: 176 ETIVLGCTHFSYFKDMFRKLALSHIKVIDGNIGTANNLKRILKEMNSLN-EGNGSITFYN 234
Query: 253 SG 254
SG
Sbjct: 235 SG 236
>gi|299529106|ref|ZP_07042554.1| glutamate racemase [Comamonas testosteroni S44]
gi|298722862|gb|EFI63771.1| glutamate racemase [Comamonas testosteroni S44]
Length = 284
Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats.
Identities = 64/262 (24%), Positives = 111/262 (42%), Gaps = 17/262 (6%)
Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFSDILDKYQPVLSV 81
+GGL VLQ +R +P F+Y+AD PYG+ D +++R + + +L+++ + V
Sbjct: 1 MGGLSVLQALRHELPHEQFVYLADSGNAPYGDARGDAFVQERSLAIAKYLLEQHDIKILV 60
Query: 82 IACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
IACNTA + LR P + +G PAIK A+ +Q+ + +++T T+ + L+
Sbjct: 61 IACNTATAAAVELLRERLPQLPVIGVEPAIKPASFSSQTHHVGVMATRGTISSQRVARLV 120
Query: 142 HSYVSQCHIHLVSSMILASRVEE---YACGIKIKEDEIKKEIEGCFIE-----KEGKRTD 193
+ + HL + LA +E+ A EI+ + + D
Sbjct: 121 SEHGQRAEFHLQACDGLARAIEQSTEQALPEDASATEIRALCAKYTSALGSFGLKTGQMD 180
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD------ 247
+VL CTHY + R L + LD +AR+ R +L + N
Sbjct: 181 TLVLGCTHYVFVKDDLRALLGPDIQLLDTGAPVARQTRRMLEQRNLLGAETDGSLQLAQA 240
Query: 248 --HALFLSGKPDIAMRRLMQGF 267
L +G+ +
Sbjct: 241 DQIQLMTTGRLTAMQAAAQRWL 262
>gi|8102060|gb|AAF72725.1|AF264024_1 glutamate racemase [Psychrobacter sp. St1]
Length = 296
Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats.
Identities = 66/266 (24%), Positives = 111/266 (41%), Gaps = 12/266 (4%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
KK I +FDSG+GGL V + +P ++Y AD + PYGN + ++ +
Sbjct: 9 NKKRNAPIGLFDSGVGGLSVYLHLAQQLPAERYVYYADTLNVPYGNRDSADIEALTLTAV 68
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
L + L VIACN+A + R +P + +G VPA+K A + +++G + +L+T
Sbjct: 69 D-WLYEQGCKLIVIACNSASAYALETARRRYPQLPIVGLVPALKPAISASKTGRVVVLAT 127
Query: 129 PATLRRTYTSNLIHSYVSQCH--IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
ATL T + +I + + + L VE ++D+ +
Sbjct: 128 KATLNGTLLNEVIDHFAKPNNTVVTKYFDPQLVPWVE----AGMPEQDDTALRLRQQLTL 183
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWP---VDWLDNSDSIARRARCLLPRINTHQ-- 241
D +VL CTHYP + +D+ +IA R + LL
Sbjct: 184 FAHDGVDQLVLGCTHYPFFKTFLLNEIAQQQLAMQVVDSGQAIAERVKQLLAANQLSALI 243
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
DDH L + K + + + +
Sbjct: 244 DNTPDDHCLETTDKTKVVTQPPLIFY 269
>gi|218280883|ref|ZP_03487507.1| hypothetical protein EUBIFOR_00065 [Eubacterium biforme DSM 3989]
gi|218217817|gb|EEC91355.1| hypothetical protein EUBIFOR_00065 [Eubacterium biforme DSM 3989]
Length = 258
Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats.
Identities = 62/236 (26%), Positives = 101/236 (42%), Gaps = 6/236 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+N I +FDSG+GG+ VL M L+P + IY+ D PYG + KR + +
Sbjct: 1 MNSKNPIGVFDSGLGGISVLHTMHSLLPNENLIYLGDSKYNPYGTKTKEEITKRCIAICD 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ + K VIACNTA + LR + + +G PA+K A + I++ +T
Sbjct: 61 EFI-KQDVKAIVIACNTATSACVKLLREKY-DVDIIGMEPALKVACDRGNNQRIAVWATE 118
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
TL +NL+ + + HI V L VE+ + ++ ++ +
Sbjct: 119 LTLSEKKFANLMDRFKDEHHIVKVPCPKLVRMVEDDKLD---DTNLVESVLKEYLAACDY 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
K D IVL CTH+P +L P + ++ S + LL +
Sbjct: 176 KNLDSIVLGCTHFPFYTKYLERLCP-NIHIIEGSVGTTLHTKDLLEQKGLLNRSDE 230
>gi|240950246|ref|ZP_04754526.1| glutamate racemase [Actinobacillus minor NM305]
gi|240295247|gb|EER46046.1| glutamate racemase [Actinobacillus minor NM305]
Length = 253
Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats.
Identities = 73/251 (29%), Positives = 125/251 (49%), Gaps = 6/251 (2%)
Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82
+GGL + ++R ++P H++Y D+ FPY + AL +R + + I +K L V+
Sbjct: 1 MGGLTIYDEVRKVLPNAHYLYCFDNAFFPYSEKSEQALIERAVKIVQKIAEKQPLDLVVV 60
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA T++ LR F +G VPAIK AAA +++ I +L+T T++R Y +LIH
Sbjct: 61 ACNTASTVVLPALRERF-DFPIVGTVPAIKPAAAISKTKTIGLLATVGTIKRPYVLDLIH 119
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
Y C + + + + E + +K+ +E D ++L CTH+
Sbjct: 120 RYAKDCQVEKIGNTQIVELAETKLLTGSVDLFSLKECVEPWL---NHPTLDTVILGCTHF 176
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRR 262
PL+ +QL P ++D+ ++IA+R + LL + H ++ F + + R
Sbjct: 177 PLLKEELKQLLPQVTYFVDSGEAIAKRVQSLLLENHHHSQEKERENTAFCTELTENFKNR 236
Query: 263 --LMQGFGLKS 271
+M G KS
Sbjct: 237 EVMMHKLGFKS 247
>gi|229817186|ref|ZP_04447468.1| hypothetical protein BIFANG_02445 [Bifidobacterium angulatum DSM
20098]
gi|229784975|gb|EEP21089.1| hypothetical protein BIFANG_02445 [Bifidobacterium angulatum DSM
20098]
Length = 259
Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 97/260 (37%), Gaps = 7/260 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I +FDSG+GG+ V +++ MP+ +Y D PYG ++ +
Sbjct: 1 MSSTAPIGVFDSGLGGISVARQIAHDMPDEKVLYFGDSANAPYGTKTPQQVRDLSFAIVE 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--S 127
+ K VIACNTA + D LR T+ + +G PA+K A ++ +
Sbjct: 61 QFV-KQGVKAVVIACNTATSAAADALRDTY-DIPIIGMEPALKVACDRGHGHRQRVIVAA 118
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TP TLR + L+ + + I L + VE D + + + F
Sbjct: 119 TPLTLRERKFAKLMDRFKADHTIFPEPCPGLVNIVEHGQLD---DHDTVMRTLHHYFGNY 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
+ D +VL CTH+ FR+L P +D ++ R +L + +
Sbjct: 176 DLPTIDSVVLGCTHFVFYRDYFRELLPDTAAIIDGNEGTVRHLHVVLESLGKLAPEGAEG 235
Query: 248 HALFLSGKPDIAMRRLMQGF 267
+ L
Sbjct: 236 GVTIANSDTSPRTAELASYL 255
>gi|261249246|emb|CBG27108.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
Length = 250
Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats.
Identities = 75/247 (30%), Positives = 129/247 (52%), Gaps = 4/247 (1%)
Query: 26 LIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACN 85
+ V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y L+VIACN
Sbjct: 1 MSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRYPLSLAVIACN 60
Query: 86 TAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYV 145
TA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R YT LI +
Sbjct: 61 TASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRPYTHELIARFA 119
Query: 146 SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLI 205
++C I ++ S L E G + +E+++ + E D +VL CTH+PL+
Sbjct: 120 NECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEPP--DTVVLGCTHFPLL 177
Query: 206 VHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP-DIAMRRLM 264
Q+ P +D+ +IARR LL + A ++ P + ++
Sbjct: 178 RDELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSTDANIAYCMAMTPGAEQLLPVL 237
Query: 265 QGFGLKS 271
Q +G ++
Sbjct: 238 QRYGFET 244
>gi|332977227|gb|EGK14022.1| glutamate racemase [Psychrobacter sp. 1501(2011)]
Length = 352
Score = 198 bits (504), Expect = 7e-49, Method: Composition-based stats.
Identities = 64/234 (27%), Positives = 100/234 (42%), Gaps = 10/234 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GGL V +R +P H++Y AD + PYG +K + + D L
Sbjct: 18 SAPIGIFDSGVGGLSVYLHLRQQLPNEHYLYYADTLNVPYGPRSSAEIKVLSL-IAVDWL 76
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
L VIACN+A R P + +G VPA+K A + S +++L+T ATL
Sbjct: 77 VAAGCKLIVIACNSASAHALPHARQKHPHIPIVGLVPALKPAVLNSNSKNVAVLATKATL 136
Query: 133 RRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ +I Y + ++ L VE + E + ++ +
Sbjct: 137 DGELLNTVISDYALPANVNVMKWFDPNLVPWVE----AGMPLDSETPERLKCQLKRFAEQ 192
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPW---PVDWLDNSDSIARRARCLLPRINTHQ 241
R D +VL CTHYP + +D+ +IA R + LL + +
Sbjct: 193 RVDHLVLGCTHYPFFREFVLAEVESENLGIKVVDSGAAIAARVKALLQQFQSLA 246
>gi|226951018|ref|YP_002806109.1| glutamate racemase [Clostridium botulinum A2 str. Kyoto]
gi|254766112|sp|C1FNG8|MURI_CLOBJ RecName: Full=Glutamate racemase
gi|226841163|gb|ACO83829.1| glutamate racemase [Clostridium botulinum A2 str. Kyoto]
Length = 257
Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats.
Identities = 67/260 (25%), Positives = 114/260 (43%), Gaps = 7/260 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I FDSG+GG+ VL++ L+P+ F+Y D PYG + +K +D
Sbjct: 4 NDKPIGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEVKALTS-NATDF 62
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP T
Sbjct: 63 LMNKGIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L +NL+ Y I + L +E+ + D I ++ F + + ++
Sbjct: 122 LAEKKFANLMDLYKETEDIEPLPCPGLPELIEQGI----VSGDIIYNYLKDKFSKYDNEK 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHAL 250
IVL CTHYP I ++++ +D S +R + L N + +
Sbjct: 178 ISSIVLGCTHYPFIEETLKEVTHNKACIIDGSFGTSRELKRQLKNSNMLREENRVGKVTI 237
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
F S + + + F +K
Sbjct: 238 FNSREDKDIIDLSYKLFNMK 257
>gi|167755834|ref|ZP_02427961.1| hypothetical protein CLORAM_01350 [Clostridium ramosum DSM 1402]
gi|237734803|ref|ZP_04565284.1| glutamate racemase [Mollicutes bacterium D7]
gi|167704773|gb|EDS19352.1| hypothetical protein CLORAM_01350 [Clostridium ramosum DSM 1402]
gi|229382131|gb|EEO32222.1| glutamate racemase [Coprobacillus sp. D7]
Length = 261
Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats.
Identities = 57/256 (22%), Positives = 114/256 (44%), Gaps = 8/256 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I +FDSG+GGL VL +R L+P + IY+ D+ PYG L +
Sbjct: 1 MERAIGVFDSGVGGLTVLNSIRTLLPNENIIYIGDNYHCPYGEKTREQLFSYASEIVEYF 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + L V+ACNT + +EL++ + + +G + A + +++T AT
Sbjct: 61 IKE-NVKLIVLACNTTSATVLNELQAVYKEVLIIGVIDATVEDFISRGVDNTLVIATAAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + I Y + + + + L VE + +I + GK
Sbjct: 120 INSHKYPDTIDCYQTGIEVFTLPTPKLVPLVEAGM-----DKKDIYDVLHEYLDSYAGK- 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
I+L CTHYP++ + + + P ++++ +SD++ + R +L + N ++
Sbjct: 174 IKSIILGCTHYPILENQIKDILPD-IEYISSSDAVCKNVRDVLIKNNLLNLNKNKFIKIY 232
Query: 252 LSGKPDIAMRRLMQGF 267
+G+ D ++ F
Sbjct: 233 TTGRVDEFLKSSTGFF 248
>gi|222151562|ref|YP_002560718.1| hypothetical protein MCCL_1315 [Macrococcus caseolyticus JCSC5402]
gi|222120687|dbj|BAH18022.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
Length = 247
Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats.
Identities = 53/236 (22%), Positives = 88/236 (37%), Gaps = 5/236 (2%)
Query: 33 RFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIK 92
+P Y+ D+ PYG +++ + L +++K+ + VIACNTA
Sbjct: 1 MRQLPNETIYYLGDEARCPYGPRTQEEVRRFTIQLAEFLINKH-IKMLVIACNTATAAAL 59
Query: 93 DELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHL 152
+ LR TF P + A T++ + +L T T+R IH +
Sbjct: 60 ESLRETFNIPIIGVIEPGARTAIMTTENNHVLVLGTEGTIRSHAYKEKIHMINPHIEVAG 119
Query: 153 VSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQL 212
S VE E E + I E + ++D ++L CTHYPL+ +
Sbjct: 120 KSCPEFVPLVESRRYK---DEAESMRIISRVLQEFKTHKSDTVILGCTHYPLLQEYINRF 176
Query: 213 SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALFLSGKPDIAMRRLMQGF 267
+ + AR LL N H T+ H F++G + +
Sbjct: 177 FDNQKKVISSGLETAREVSALLTFRNIHVTQPATVAHRFFVNGDAEHFTEIAKEWL 232
>gi|148381502|ref|YP_001256043.1| glutamate racemase [Clostridium botulinum A str. ATCC 3502]
gi|153933747|ref|YP_001385877.1| glutamate racemase [Clostridium botulinum A str. ATCC 19397]
gi|153937684|ref|YP_001389284.1| glutamate racemase [Clostridium botulinum A str. Hall]
gi|166231033|sp|A7FZC4|MURI_CLOB1 RecName: Full=Glutamate racemase
gi|166231034|sp|A5I7T7|MURI_CLOBH RecName: Full=Glutamate racemase
gi|148290986|emb|CAL85122.1| glutamate racemase [Clostridium botulinum A str. ATCC 3502]
gi|152929791|gb|ABS35291.1| glutamate racemase [Clostridium botulinum A str. ATCC 19397]
gi|152933598|gb|ABS39097.1| glutamate racemase [Clostridium botulinum A str. Hall]
Length = 257
Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats.
Identities = 68/260 (26%), Positives = 114/260 (43%), Gaps = 7/260 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I FDSG+GG+ VL++ L+P+ F+Y D PYG + +K F +D
Sbjct: 4 NDKPIGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEVKALT-FNATDF 62
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP T
Sbjct: 63 LMSKGIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L +NL+ Y I + L +E+ + D I ++ F + + ++
Sbjct: 122 LAEKKFANLMDLYKETEDIEPLPCPGLPELIEQGI----VSGDVIYNYLKDKFSKYDNEK 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHAL 250
IVL CTHYP I ++++ +D S +R + L N +
Sbjct: 178 ISSIVLGCTHYPFIEETLKEVTHNKACIIDGSFGTSRELKRQLKNSNMLTEENRVGKVTI 237
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
F S + + + F +K
Sbjct: 238 FNSREDKDIIDLSYKLFNMK 257
>gi|308233557|ref|ZP_07664294.1| glutamate racemase [Atopobium vaginae DSM 15829]
gi|328943355|ref|ZP_08240820.1| glutamate racemase [Atopobium vaginae DSM 15829]
gi|327491324|gb|EGF23098.1| glutamate racemase [Atopobium vaginae DSM 15829]
Length = 261
Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats.
Identities = 65/256 (25%), Positives = 108/256 (42%), Gaps = 11/256 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ VL+K+ +P F Y D PYG + + +++ K
Sbjct: 8 IGVFDSGLGGISVLKKLVSQLPHEDFFYFGDTGHNPYGARSADDIFDLSKAIVDNMVCK- 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
VIACNTA + +LR+ +P + +G PA+KQA I +L+TP TLR
Sbjct: 67 GAKAVVIACNTATAVAAHKLRTMYPQLPLIGIEPALKQACDAHIYKHILVLATPVTLRME 126
Query: 136 YTSNL----IHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L + I ++ LA R+E+ +++++ +
Sbjct: 127 KFHQLRDRMCACNSANVKISALACDGLAHRIEQGNLDAPDLDNDLRTILAPYIG-----S 181
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTHYP + + PV + D + +A R +L + ++ F
Sbjct: 182 VDAVVLGCTHYPFVKDRIVSILGNPVCF-DGAAGVAHHVRDVLQDRDLLNDQIERGCVTF 240
Query: 252 LSGKPDIAMRRLMQGF 267
+ D L + F
Sbjct: 241 ATSAHDAHQLDLYEQF 256
>gi|154174379|ref|YP_001408311.1| glutamate racemase [Campylobacter curvus 525.92]
gi|166231030|sp|A7GYL9|MURI_CAMC5 RecName: Full=Glutamate racemase
gi|112803185|gb|EAU00529.1| glutamate racemase [Campylobacter curvus 525.92]
Length = 266
Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats.
Identities = 65/246 (26%), Positives = 103/246 (41%), Gaps = 13/246 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL VL + +P F+Y AD PYG + K L
Sbjct: 2 KIGIFDSGLGGLSVLNEALKKLPNEEFLYYADRKNVPYGLKSKDEILKFSSHAV-KFLID 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ------SGLISILST 128
VIACNTA + +ELR+ F + +G PA+K+AA + S +++T
Sbjct: 61 QGANAIVIACNTATSAAINELRAKF-DLPIIGMEPAVKKAADLNREGENSASLRTLVIAT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
P T++ LI S+ + +++ L E DE+K+ + F + +
Sbjct: 120 PLTVQGAKLKELIERVDSEHLVDVLALPRLVEFAE----NENFACDEVKEYLREEFAKFK 175
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
+ +VL CTH+ R++ P V +D ++ + L R+N
Sbjct: 176 LQNYCALVLGCTHFNYFKDSLREILPAGVSLIDGNEGTINKLISELSRLNL-AHGKGQSV 234
Query: 249 ALFLSG 254
F S
Sbjct: 235 EYFYSD 240
>gi|170755805|ref|YP_001783201.1| glutamate racemase [Clostridium botulinum B1 str. Okra]
gi|229486236|sp|B1IH18|MURI_CLOBK RecName: Full=Glutamate racemase
gi|169121017|gb|ACA44853.1| glutamate racemase [Clostridium botulinum B1 str. Okra]
Length = 257
Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats.
Identities = 68/260 (26%), Positives = 115/260 (44%), Gaps = 7/260 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I FDSG+GG+ VL++ L+P+ F+Y D PYG + +K F +D
Sbjct: 4 NDKPIGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEVKALT-FNATDF 62
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP T
Sbjct: 63 LMNKGIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L +NL+ Y I + L +E+ + D I ++ F + + ++
Sbjct: 122 LAEKKFANLMDLYKETEDIEPLPCPGLPELIEQGI----VSGDVIYNYLKDKFSKYDNEK 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHAL 250
IVL CTHYP I ++++ +D S +R + L N + +
Sbjct: 178 ISSIVLGCTHYPFIEKTLKEVTYNKACIIDGSFGTSRELKRQLKNSNMLREENRVGKVTI 237
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
F S + + + F +K
Sbjct: 238 FNSREDKDIIDLSYKLFNMK 257
>gi|332830408|gb|EGK03036.1| glutamate racemase [Dysgonomonas gadei ATCC BAA-286]
Length = 275
Score = 198 bits (503), Expect = 9e-49, Method: Composition-based stats.
Identities = 60/261 (22%), Positives = 102/261 (39%), Gaps = 11/261 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG GGL +L +++ LMPEY + Y+ D+ PYG+ + + L
Sbjct: 6 PIGVFDSGYGGLTILSEIQSLMPEYDYCYLGDNSRAPYGSRSFDVVYEFTKQAV-LSLFD 64
Query: 75 YQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISILST 128
L ++ACNTA + + +L P LG + P + TQS + IL T
Sbjct: 65 MGCNLVILACNTASAKALRTIQQKDLPHIDPDKRVLGVIRPTAEIIGPITQSRHVGILGT 124
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ S I+ + + + VE + + IKK + +
Sbjct: 125 TGTIQSESYSIEINKLFPDIKVSGEACPMWVPLVENREYENEGADYFIKKNLSNILS--K 182
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ--TRVFD 246
+ D ++L CTHYP++++ + P V + + IAR + L R
Sbjct: 183 DPQIDTLILGCTHYPILLNKIKSFLPDGVTAIAQGEYIARSLQDYLHRHPEMDKVCTKGS 242
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ + P
Sbjct: 243 VTKYYTTESPQKFSEAATIFL 263
>gi|238897697|ref|YP_002923376.1| glutamate racemase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229465454|gb|ACQ67228.1| glutamate racemase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 271
Score = 198 bits (503), Expect = 9e-49, Method: Composition-based stats.
Identities = 86/257 (33%), Positives = 140/257 (54%), Gaps = 7/257 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+LI DSGIGGL V Q+M+ L+P H+IY D+ GFPYG + + ++++ + + I K+
Sbjct: 13 VLILDSGIGGLSVYQEMKKLLPHIHYIYCFDNEGFPYGEKSEIFILEQIVRIMTAIQKKH 72
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+IACNTA T++ LR F S +GAVPAIK AA T++G++ +L+TPAT++R
Sbjct: 73 FLNCVIIACNTASTIVLPILRQRF-SFPIIGAVPAIKPAAHITRNGVLGLLATPATIKRP 131
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT +LI + C + L+ S L E+ G +I + KK ++ K D I
Sbjct: 132 YTLDLIKRFAKNCQVELLGSSELVYLAEKKVLGTEISINMFKKILQPWLN--LQKVPDTI 189
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL--S 253
VL CTH+P I++ +Q+ + + +IA+RA L+ F + A + +
Sbjct: 190 VLGCTHFPFIINELQQIF-LNARMIHSGAAIAKRAFSLIGSQQNTSVHSFKNKAYCVKKN 248
Query: 254 GKPDIAMRRLMQGFGLK 270
G + +++ +G
Sbjct: 249 GDTESLS-PILEKYGFS 264
>gi|294500374|ref|YP_003564074.1| glutamate racemase [Bacillus megaterium QM B1551]
gi|294350311|gb|ADE70640.1| glutamate racemase [Bacillus megaterium QM B1551]
Length = 266
Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 68/256 (26%), Positives = 103/256 (40%), Gaps = 8/256 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSGIGG+ VL + P+ F+Y AD PYG + K + DIL K
Sbjct: 3 IGFFDSGIGGISVLNEAIKHFPKEDFLYYADTRNVPYGTRTKEEVNKHVQTAVEDIL-KQ 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--STPATLR 133
+ VIACNTA ++ +ELRST+ + +G PA K A + S +L +T TL+
Sbjct: 62 EVKALVIACNTATSISINELRSTY-DIPIIGMEPAAKPAIELSSSMDKRVLVFATDLTLK 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
LI + + L E + D++ + +
Sbjct: 121 ELKYKKLITRIDKDSIVDPLPLPELVEFCE----DLNFNWDKLSTYFRTKLEGFDLNQYG 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTH+P V + L P + +D S R LL + T +D + S
Sbjct: 177 TVVLGCTHFPYYKPVLKDLLPSHIQLIDGSKGTVERLSSLLEEKSLLSTNGTNDISFQCS 236
Query: 254 GKPDIAMRRLMQGFGL 269
M ++ +
Sbjct: 237 SNDKNYMIKMENALNI 252
>gi|254302994|ref|ZP_04970352.1| glutamate racemase [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
gi|148323186|gb|EDK88436.1| glutamate racemase [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
Length = 264
Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 65/257 (25%), Positives = 108/257 (42%), Gaps = 10/257 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGN-WEDHALKKRLMFLFSDIL 72
I IFDSG+GG VL++M +P +IY D+ FPYG+ + L+K + +
Sbjct: 6 QKIGIFDSGLGGTTVLKEMIKSLPNEDYIYYGDNGNFPYGSGKTKNELQKLTERILDFFV 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
L ++ACNTA T D LR F +K A+ T++ I+++ST T
Sbjct: 66 KN-NCKLVIVACNTASTAAIDYLREKFSLPIIGIVEAGVKIASKTTKNKNIAVISTKFTA 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
N S+ ++ ++ + A +E +++ + K + K T
Sbjct: 125 ESHGYKNKAKMLDSELNVKEIACIEFAQMIESGWDTFDNRKELLNKYLSE-----IPKNT 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FDDHALF 251
D +VL CTHYPLI + + +D + I RA L +N + F
Sbjct: 180 DTLVLGCTHYPLIRKDIEKNI--KIKVVDPAVEIVERATQTLTTLNLLNDKKEKGKVIFF 237
Query: 252 LSGKPDIAMRRLMQGFG 268
++G+ + G
Sbjct: 238 VTGETYHFKPTAEKFLG 254
>gi|313673160|ref|YP_004051271.1| glutamate racemase [Calditerrivibrio nitroreducens DSM 19672]
gi|312939916|gb|ADR19108.1| glutamate racemase [Calditerrivibrio nitroreducens DSM 19672]
Length = 261
Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 59/251 (23%), Positives = 102/251 (40%), Gaps = 17/251 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V + + YV D PYGN + K + L ++ +
Sbjct: 3 IGVFDSGVGGLTVFKSIADRFKTVDIYYVGDTARVPYGNKSRDTIVKYSLELTEFLVKSF 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNTA + D L++ + P A T++G I ++ T AT+
Sbjct: 63 AVDLVVVACNTASSYALDFLKNRYNIPIIGVVEPGCIAAINATKNGKIGVIGTQATINSN 122
Query: 136 YTSNLI-HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+N + ++ +L VEE + + +K+ ++G E D
Sbjct: 123 SYANTLSALTGGGVRVYQKGCPLLVPLVEEGKIEHPVTKIILKEYLDGIVSE----GIDT 178
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL---LPRINTHQTRVFDDHALF 251
++L CTHYP++ V + P ++ +D+S +I L L LF
Sbjct: 179 LILGCTHYPVLKDVINSIYPE-LNLVDSSVAIIDYIHKLNLDLNEKGLRN--------LF 229
Query: 252 LSGKPDIAMRR 262
++ +
Sbjct: 230 VTDESVSFENL 240
>gi|170758321|ref|YP_001788902.1| glutamate racemase [Clostridium botulinum A3 str. Loch Maree]
gi|229486237|sp|B1KTG4|MURI_CLOBM RecName: Full=Glutamate racemase
gi|169405310|gb|ACA53721.1| glutamate racemase [Clostridium botulinum A3 str. Loch Maree]
Length = 257
Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 66/243 (27%), Positives = 109/243 (44%), Gaps = 7/243 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I FDSG+GG+ VL++ L+P+ F+Y D PYG + +K F +D
Sbjct: 4 NDKPIGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNAPYGTKKVEEVKTLT-FNATDF 62
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP T
Sbjct: 63 LMNKGIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L +NL+ Y I + L +E+ + D I ++ F + + ++
Sbjct: 122 LAEKKFANLMDLYKETEDIEPLPCPGLPELIEQGI----VSGDVIYNYLKDKFSKYDNEK 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHAL 250
IVL CTHYP I ++++ +D S +R + L N + +
Sbjct: 178 ISSIVLGCTHYPFIEETLKEVTHNKACIIDGSFGTSRELKRQLKNSNMLREENRVGKVTI 237
Query: 251 FLS 253
F S
Sbjct: 238 FNS 240
>gi|114799484|ref|YP_761669.1| glutamate racemase [Hyphomonas neptunium ATCC 15444]
gi|114739658|gb|ABI77783.1| glutamate racemase [Hyphomonas neptunium ATCC 15444]
Length = 290
Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 93/272 (34%), Positives = 143/272 (52%), Gaps = 6/272 (2%)
Query: 1 MKIDN-YPCE-KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58
M D +P E + +L+FDSG+GGL V ++R L P Y AD FPYG+ D
Sbjct: 1 MTADAPFPFEPSPARGRVLVFDSGVGGLTVAAEIRALGPRLSVHYAADTGFFPYGDKSDE 60
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
AL+ RL + +++ +P + VIACNTA TL E+R+ + +G VPAIK AA T
Sbjct: 61 ALRARLPVVAKALVEAVRPDVFVIACNTASTLALPEVRAVL-DIPVVGTVPAIKPAAKLT 119
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
++G I +L+TP T+RR YT+ LI + S + L S+ L E +A G + +
Sbjct: 120 ETGTIGLLATPGTIRRAYTARLIEEFASGKRVILHGSLDLVKLAEAHARGEDVPPEAFAA 179
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
F G + D IVLACTH+PL+ +P V ++D+ +IAR+ +LP N
Sbjct: 180 AQAPLFTAPGGDQIDTIVLACTHFPLVRGQLIATAPHAVSYIDSGAAIARQTIRVLPARN 239
Query: 239 THQTRVFDDHALFLS-GKPDIAMRRLMQGFGL 269
++ A S + + + R+++ +G
Sbjct: 240 --ESGGQGGTACLTSPPEREEGITRVLRRYGF 269
>gi|187931550|ref|YP_001891534.1| glutamate racemase [Francisella tularensis subsp. mediasiatica
FSC147]
gi|187712459|gb|ACD30756.1| glutamate racemase [Francisella tularensis subsp. mediasiatica
FSC147]
Length = 265
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 51/256 (19%), Positives = 96/256 (37%), Gaps = 10/256 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSGIGGL +++ + ++P IY D PYG ++K L
Sbjct: 4 NRPIGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQKFAAQTA-KFL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ +IACNT + KD ++ ++ + + A + + +++TPAT+
Sbjct: 63 IDQEVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAGVSLVDNLNT--VGVIATPATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ +H ++ + S +EE I E K+ K
Sbjct: 121 NSNAYALQMHKKNPNIEVYSNPCGLFVSMIEEGFVSGHIVELVAKE----YLSYFHDKNI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251
++L CTHYP+I ++ V +D S ++ LL T+ ++ +
Sbjct: 177 QALILGCTHYPIIKESIAKIL--DVKLIDPSLQASKMLYSLLFENKLLNTTKSNPEYRFY 234
Query: 252 LSGKPDIAMRRLMQGF 267
++
Sbjct: 235 VTDIHLKFRSVGEMFL 250
>gi|310641730|ref|YP_003946488.1| glutamate racemase 2 [Paenibacillus polymyxa SC2]
gi|309246680|gb|ADO56247.1| Glutamate racemase 2 [Paenibacillus polymyxa SC2]
Length = 284
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 58/261 (22%), Positives = 103/261 (39%), Gaps = 14/261 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I FDSG+GG+ VL + +P +F+Y+AD + PYG + + IL +
Sbjct: 19 KIGFFDSGLGGITVLSEALRRLPNENFVYMADTLHVPYGTKTPQEVLGYVKASVQTILKE 78
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILSTPATL 132
VIACNTA ++ ELR + +G PA+K A + + +L+TP TL
Sbjct: 79 -DIKALVIACNTATSIAVAELRKEYK-FPIIGMEPAVKPAVEMNRANGKRVLVLATPLTL 136
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+++ + L+ + + L E+ E+
Sbjct: 137 KQSGYAALVSRVDDHGSVDSLPLPELVQYCEQL----NFDRTELFNYFNHKLSSFNLDIY 192
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT------RVFD 246
+VL CTHYP + R+L P + +D S +R + +L N +
Sbjct: 193 GTVVLGCTHYPFYKEILRELLPSHIQLIDGSHGTVKRLKQVLSERNLLASPVKVGQPQEG 252
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+ + + + ++ +
Sbjct: 253 HVTFLCTSQDETYVHKMERAL 273
>gi|212550932|ref|YP_002309249.1| glutamate racemase [Candidatus Azobacteroides pseudotrichonymphae
genomovar. CFP2]
gi|212549170|dbj|BAG83838.1| glutamate racemase [Candidatus Azobacteroides pseudotrichonymphae
genomovar. CFP2]
Length = 276
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 62/266 (23%), Positives = 104/266 (39%), Gaps = 11/266 (4%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K++ SI IFDSG GG +L+K+R+ +P Y F+Y+ D+ PYG + + +
Sbjct: 1 MKVKGSIGIFDSGYGGFTILEKIRYRLPRYDFLYLGDNARAPYGTRSFEIVYEFTLQSVR 60
Query: 70 DILDKYQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLI 123
L + L ++ACNT+ + +++L S P LG + P ++ TQ+ I
Sbjct: 61 K-LFEKGCHLVILACNTSSAKALRTIQQNDLPSIAPQKRLLGVIRPTVEAVGRLTQTRHI 119
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L T T+ S + + + + S VE + +K+ I
Sbjct: 120 GVLGTQGTILSGSYSIEMKRLFPDIVVTGEACPMWVSLVENGEYDRPGADYFVKQHINSI 179
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-- 241
+ D +VL CTHYPL+ +Q P V L +A L R
Sbjct: 180 LN--KDPLIDTLVLGCTHYPLLETKIKQYLPKSVSILSQGKYVAEGLADYLRRHPEIDMC 237
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ + + F
Sbjct: 238 CSKNSVECFYTTESENKFASMANIFF 263
>gi|257095297|ref|YP_003168938.1| glutamate racemase [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
gi|257047821|gb|ACV37009.1| glutamate racemase [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
Length = 261
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 67/254 (26%), Positives = 112/254 (44%), Gaps = 10/254 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL + +P +Y+AD PYG+ +D ++ R++ + L
Sbjct: 2 IGVFDSGLGGLSVLAAIARALPRADLVYLADTAHVPYGDKDDAFIRSRVLRI-GRHLVDQ 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA R +FP + +G P +K AAA ++SG I++L+T +T R
Sbjct: 61 GCGVIVVACNTATAAAVAAFRESFPMLPVVGVEPGVKPAAAASRSGRIAVLATASTARSQ 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ LI + + + A+RVE +E ++ D I
Sbjct: 121 RLAQLIRQHAGSVRVDVEPCPGWATRVESLRLEDPDFVEEARQH----LAPLLAAGVDQI 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTHY + + +D +D++AR+ L R L + +
Sbjct: 177 VLGCTHYAFLCPTLEPIVAQRASLVDVADAVARQCVRL----AGASARGRGQLRLLATAQ 232
Query: 256 PDIAMRRLMQGFGL 269
P+ + + GL
Sbjct: 233 PER-LDAALPALGL 245
>gi|332184267|gb|AEE26521.1| Glutamate racemase [Francisella cf. novicida 3523]
Length = 265
Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 48/256 (18%), Positives = 94/256 (36%), Gaps = 10/256 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSGIGGL +++ + ++P IY D PYG ++K L
Sbjct: 4 NRPIGVFDSGIGGLTIVKNLINILPNEDIIYFGDIARIPYGTKSRAMIQKFAAQTA-KFL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + +IACNT + KD ++ ++ + + A + +++TPAT+
Sbjct: 63 IEQEVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAGVSLVDS--LSKVGVIATPATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ IH ++ + S +E + ++ + K
Sbjct: 121 NSNAYALQIHKKNPNIEVYSNPCGLFVSMIE----EGFVSGQIVELVAKEYLSYFHDKNI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALF 251
++L CTHYP+I ++ V +D S ++ LL ++ +
Sbjct: 177 QALILGCTHYPIIKESIAKIL--DVKLIDPSLQASKMLYSLLFDNKLLNRANSNPEYRFY 234
Query: 252 LSGKPDIAMRRLMQGF 267
++ P
Sbjct: 235 VTDIPLKFRSVGEMFL 250
>gi|168183642|ref|ZP_02618306.1| glutamate racemase [Clostridium botulinum Bf]
gi|237797023|ref|YP_002864575.1| glutamate racemase [Clostridium botulinum Ba4 str. 657]
gi|259509811|sp|C3KWB8|MURI_CLOB6 RecName: Full=Glutamate racemase
gi|182673216|gb|EDT85177.1| glutamate racemase [Clostridium botulinum Bf]
gi|229262938|gb|ACQ53971.1| glutamate racemase [Clostridium botulinum Ba4 str. 657]
Length = 257
Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats.
Identities = 67/260 (25%), Positives = 115/260 (44%), Gaps = 7/260 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I FDSG+GG+ VL++ L+P+ F+Y D PYG + +K F +D
Sbjct: 4 NDKPIGFFDSGVGGISVLKEAFKLLPKEDFLYYGDSKNTPYGTKKVEEVKALT-FNATDF 62
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L V+ACNTA ++ ++LR + + +G PA+K A + G I I++TP T
Sbjct: 63 LMSKGIKALVVACNTATSVTINDLRENY-DIPIIGIEPALKPAVELKKGGKIIIMATPMT 121
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L +NL+ Y I + L +E+ + D I ++ F + + ++
Sbjct: 122 LAEKKFANLMDLYKETEDIEPLPCPGLPELIEQGI----VSGDVIYNYLKDKFSKYDDEK 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHAL 250
IVL CTHYP + ++++ +D S +R + L N + +
Sbjct: 178 ISSIVLGCTHYPFVEETLKEVTHNKACIIDGSFGTSRELKRQLKNSNMLREENRVGKVTI 237
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
F S + + + F +K
Sbjct: 238 FNSREDKDIIDLSYKLFNMK 257
>gi|119944401|ref|YP_942081.1| glutamate racemase [Psychromonas ingrahamii 37]
gi|119863005|gb|ABM02482.1| glutamate racemase [Psychromonas ingrahamii 37]
Length = 268
Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats.
Identities = 81/263 (30%), Positives = 127/263 (48%), Gaps = 12/263 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+LIFDSG+GGL V ++R P Y+ D+ FPYG + L +RLM L S L ++
Sbjct: 6 VLIFDSGVGGLSVFDQVRKQSPGIKCFYLFDNAYFPYGELQADFLIQRLMSLLSSFLGRH 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ L VIACN+A T+ LR +F S+ +G VPAIK A T++G+I +L+TPAT+
Sbjct: 66 KIDLIVIACNSASTVALQYLRESF-SIPIVGVVPAIKPATFLTKNGVIGLLATPATINGA 124
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
YT+ LI + + + + S L E G I++ +I+ + D I
Sbjct: 125 YTARLIDEFAADKQVLKIGSTQLVKLAELKLQGKLIQQADIEGVLAAWL--MLDTMPDTI 182
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS-- 253
VL CTH+PL+ + ++ +D+ ++IA+R LL T + H + +
Sbjct: 183 VLGCTHFPLLKAEIFRCFKDKINLVDSGNAIAQRVTQLLGESEM--TAKENTHQAYFTKV 240
Query: 254 ---GKPDIAMRRLMQGF--GLKS 271
+ G S
Sbjct: 241 YQLDESTNFSALQRSFLAYGFNS 263
>gi|220930761|ref|YP_002507670.1| glutamate racemase [Clostridium cellulolyticum H10]
gi|220001089|gb|ACL77690.1| glutamate racemase [Clostridium cellulolyticum H10]
Length = 258
Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats.
Identities = 62/245 (25%), Positives = 106/245 (43%), Gaps = 8/245 (3%)
Query: 12 LQ-NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ + I DSG GG+ VL + +P+ ++IY AD PYG +++ +
Sbjct: 1 MNADKIGFLDSGFGGITVLSEALRQLPKENYIYYADIEHVPYGTKTKEEVRQYVFQAVEF 60
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ V+ACNTA ++ ELR+ + LG PA+K A + +L+T
Sbjct: 61 MV-SQGIKALVVACNTATSIAVRELRNMY-EFPILGMEPAVKPAVQNGNGKRVLVLATAL 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
TLR NL+ + + + L E + IKK+++G
Sbjct: 119 TLREEKFHNLVQRVDQEHVVDYLPFPELVELAENMVFDYEKVIPVIKKKLDGY----NLN 174
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHA 249
VL CTH+P+ ++ F+++ P +D +D S+ R + LL + T +
Sbjct: 175 NYKTFVLGCTHFPIYINAFKEVLPPFIDIIDGSEGTIRYLKLLLEERHLISTNINGGNIV 234
Query: 250 LFLSG 254
F SG
Sbjct: 235 FFDSG 239
>gi|220931107|ref|YP_002508015.1| glutamate racemase [Halothermothrix orenii H 168]
gi|254766117|sp|B8D151|MURI_HALOH RecName: Full=Glutamate racemase
gi|219992417|gb|ACL69020.1| glutamate racemase [Halothermothrix orenii H 168]
Length = 253
Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats.
Identities = 65/253 (25%), Positives = 114/253 (45%), Gaps = 9/253 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GG+ VL++ L+P +IY AD PYG + + +++ + L
Sbjct: 3 IGIFDSGVGGITVLKEALNLLPGEDYIYYADTANVPYGTKDKNEVRQYIFKAVE-FLINR 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA ++ +LR T+ +G PA+K A +++ + +L+TP T+R
Sbjct: 62 GIEALVVACNTATSIAIKDLRETY-QFPIVGMEPAVKPAVERSRNKKVLVLATPLTIREE 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
NL+ ++ + + L E G E+ I ++ + +
Sbjct: 121 KFRNLVSRVKAEDIVDSLGLPGLVEYAE----GFVFDENIIIPYLKDRLSPFNLQEYGTL 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ-TRVFDDHALFLSG 254
VL CTH+ +F ++ P +D +D + R + LL + + + + SG
Sbjct: 177 VLGCTHFLYFRDIFNKIIPDHIDIIDGNKGTVRHLKNLLLQSGFKTGSEGSGEIIFYSSG 236
Query: 255 KPDIAMRRLMQGF 267
K D RRL +
Sbjct: 237 KKD--ERRLKKYL 247
>gi|116235003|dbj|BAF34941.1| putative glutamate racemase [Hydrogenobacter thermophilus]
Length = 206
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 46/211 (21%), Positives = 97/211 (45%), Gaps = 8/211 (3%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+FDSG+GGL VL++++ P +Y+ D PYG + + + ++ L ++
Sbjct: 4 GVFDSGVGGLTVLKEIKKAFPSLDLVYLGDTARVPYGGKSKDTIIRYSLE-CAEFLIRFD 62
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L V+ACNTA + D L+ F P +++A +++ +I ++ T +T++
Sbjct: 63 IDLLVVACNTASSYALDILKKELGIPVFGVIKPGVRKALEVSKNKVIGVIGTKSTIKSGV 122
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
+ + ++ + + VEE D + K ++ + + + D ++
Sbjct: 123 YQRSL--MEAGSVVYAKACPLFVPLVEEGLTHG----DIVDKVVDFYLRDFKNTQMDTLI 176
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
L CTHYPL+ + V +D++ ++
Sbjct: 177 LGCTHYPLLAEAIKNYMGD-VQIVDSASALV 206
>gi|148242257|ref|YP_001227414.1| glutamate racemase [Synechococcus sp. RCC307]
gi|147850567|emb|CAK28061.1| Glutamate racemase [Synechococcus sp. RCC307]
Length = 292
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 55/253 (21%), Positives = 97/253 (38%), Gaps = 10/253 (3%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+FDSG+GGL VL+++ P +YV D PYG+ + ++ + L +
Sbjct: 32 GLFDSGLGGLTVLRRLLSQRPGQRCVYVGDTARVPYGSRDRAEIRCIAAEVVG-WLREQG 90
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACNT L D +S + LG + A+ + + I +L+T AT
Sbjct: 91 AEAVVMACNTTNALALDVAQS-EAGVPVLGLIDAVARQVQQQR---IGVLATEATASSGA 146
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
+ + I + VE ++ +++ + R + IV
Sbjct: 147 YGRALQAQRQGLTIVEMGCPAFVPAVE----AHQLDTPALRRAAQRYLEPLLDARVEAIV 202
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALFLSGK 255
L C+HYPL+ + R L P V+ +D + ++ L P + +G
Sbjct: 203 LGCSHYPLLEPMLRDLLPAGVELIDPAHALVDLTLSLFPDQRRPAIEPDLSGCRVVATGD 262
Query: 256 PDIAMRRLMQGFG 268
P + G
Sbjct: 263 PAEFAAGSARWLG 275
>gi|329113332|ref|ZP_08242113.1| Glutamate racemase [Acetobacter pomorum DM001]
gi|326697157|gb|EGE48817.1| Glutamate racemase [Acetobacter pomorum DM001]
Length = 304
Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats.
Identities = 92/262 (35%), Positives = 137/262 (52%), Gaps = 7/262 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
IL FDSGIGGL +++ ++ L P Y+AD FPYG +D L +R++ L S +
Sbjct: 32 RHILAFDSGIGGLGIVRAIQALAPNVCIDYLADTAIFPYGEQDDDFLIERIVSLLSQAIR 91
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ QP V+ACNTA TL + LR+ +P M F+G VP I+ AA TQ+ +I +L+T AT+R
Sbjct: 92 RLQPQAVVVACNTASTLALEALRAAWPDMPFVGCVPPIRWAARITQTKVIGLLATRATVR 151
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R Y S L Y +C + ++ LA E G + + I +EIEG F+ + R D
Sbjct: 152 RPYLSRLHALYAPECTLIAHAAPGLAGCAELAFRGQDVPDSTILREIEGLFVHPDSNRLD 211
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL- 252
+ L CTHY +++ R LSP + WLD + ++AR LL + Q A F
Sbjct: 212 AVGLGCTHYTFVLNRLRALSPPGLTWLDPAPAVARHTCNLLA--HLPQKTHAHPCAWFTA 269
Query: 253 ---SGKPDIAMRRLMQGFGLKS 271
+ + L +G +
Sbjct: 270 LPDTQNDQALLTHLKP-YGFSA 290
>gi|315925652|ref|ZP_07921862.1| glutamate racemase [Pseudoramibacter alactolyticus ATCC 23263]
gi|315621193|gb|EFV01164.1| glutamate racemase [Pseudoramibacter alactolyticus ATCC 23263]
Length = 258
Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats.
Identities = 65/258 (25%), Positives = 101/258 (39%), Gaps = 7/258 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K + I +FDSG+GG+ VL+ + +P +F++ D PYG ++ +
Sbjct: 3 KAFNDYIGVFDSGVGGISVLKHLTEQLPNENFLFYGDSANAPYGEKSVEQVRALAFDIVR 62
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+++ VIACNTA + ELR + +G PA+K AA + + +++TP
Sbjct: 63 RMVED-GVKAIVIACNTATSAAAKELR-CAFELPIIGVEPALKPAATASGRHRVLVMATP 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
TL +L Y S LA R+E I+K I
Sbjct: 121 VTLSLQKYRDLWDRYAGYAECVSCSCPGLAKRIERGRLDAPDLTALIEKLIGCY-----R 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
R D +VL CTHYP + R + V D A + +L +
Sbjct: 176 GRVDSVVLGCTHYPFVSDQIRGVLGSHVTLYDGGAGTAGELKNVLTQKQLLTRAATPGGV 235
Query: 250 LFLSGKPDIAMRRLMQGF 267
LF S + L + F
Sbjct: 236 LFQSSLKQPSEITLYRHF 253
>gi|58336762|ref|YP_193347.1| gluracemase [Lactobacillus acidophilus NCFM]
gi|227903323|ref|ZP_04021128.1| glutamate racemase [Lactobacillus acidophilus ATCC 4796]
gi|75433023|sp|Q5FLV8|MURI_LACAC RecName: Full=Glutamate racemase
gi|58254079|gb|AAV42316.1| gluracemase [Lactobacillus acidophilus NCFM]
gi|227868952|gb|EEJ76373.1| glutamate racemase [Lactobacillus acidophilus ATCC 4796]
Length = 267
Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats.
Identities = 56/256 (21%), Positives = 96/256 (37%), Gaps = 7/256 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I + DSG GGL V +K+ +P I++ D+ PYG+ + L
Sbjct: 3 NRPIGLLDSGFGGLSVAKKVIEKLPNESTIFIGDNAHIPYGDRTREDIINLTRRSV-KFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L VIACNTA + ++ AA T++ +++++T T+
Sbjct: 62 LEKNVKLIVIACNTATAVAMPTMQKEVEQQIIGVIQSGALAAARTTKNKNVAVVATNVTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + + +++ LA VE + K ++ GK
Sbjct: 122 ASHAYQKEIKFRDPEIKVTELAAPKLAPLVE-----AQKDYATNLKVVKESLAPLMGKEF 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWP-VDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTHYPLI F + V LD +D +A+ ++ R H +
Sbjct: 177 DTLVLGCTHYPLIQKEFEEAINNKEVTILDPADQVAQYTFNVMRRDGLFSDSEKAVHEYY 236
Query: 252 LSGKPDIAMRRLMQGF 267
+G + +
Sbjct: 237 TTGNSETFDKLARTFM 252
>gi|312113587|ref|YP_004011183.1| glutamate racemase [Rhodomicrobium vannielii ATCC 17100]
gi|311218716|gb|ADP70084.1| glutamate racemase [Rhodomicrobium vannielii ATCC 17100]
Length = 282
Score = 195 bits (497), Expect = 4e-48, Method: Composition-based stats.
Identities = 105/244 (43%), Positives = 141/244 (57%), Gaps = 6/244 (2%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L DSG+GGL VL+ R +PE +++ADD FPYG+ + L +RL+ L L ++
Sbjct: 11 LFLDSGLGGLTVLRAARAAIPEAEVLFIADDAAFPYGSKPEGELVERLLDLVGGALAAFE 70
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
P V+ACNTA T+ LR+ F S+ F+G VPAIK AAA T+SGL+S+L+TP T+ R Y
Sbjct: 71 PDCVVLACNTASTVALSALRAAF-SVPFVGTVPAIKPAAAITRSGLVSVLATPGTVAREY 129
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI Y + LV + LA E+YA G + + I +EI CF+E RTDV+V
Sbjct: 130 THTLIEKYALGARVALVGAANLAELAEDYASGETVSDAAIAREIAPCFVEDADARTDVVV 189
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH----QTRVFDDHALFL 252
L CTHYPL++ LSPWPV WLD + +IARR +L R A
Sbjct: 190 LGCTHYPLLLERLDALSPWPVTWLDPAPAIARRIANVLSERGHIVGVGAKRGHGTIAF-T 248
Query: 253 SGKP 256
SG+
Sbjct: 249 SGRT 252
>gi|329907999|ref|ZP_08274775.1| Glutamate racemase [Oxalobacteraceae bacterium IMCC9480]
gi|327546835|gb|EGF31763.1| Glutamate racemase [Oxalobacteraceae bacterium IMCC9480]
Length = 275
Score = 195 bits (497), Expect = 4e-48, Method: Composition-based stats.
Identities = 64/266 (24%), Positives = 112/266 (42%), Gaps = 11/266 (4%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I +FDSGIGGL VL+ +R +P+ +Y +D PYG + +++R + +
Sbjct: 6 MAANAPIGVFDSGIGGLSVLRHIRANLPQEALLYFSDAQFAPYGGRPEQQIEERALAI-G 64
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+L +Q V+ACN+A LR +P++ +G P +K AAA + S ++ +L+T
Sbjct: 65 ALLVAHQVKALVVACNSATAAAIAALRHAYPALIVVGVEPGLKPAAAVSASRIVGVLATE 124
Query: 130 ATLRRTYTSNLIHS--YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
ATL + L + + LA R+E+ + + + +
Sbjct: 125 ATLASERFARLRMTLSAATGVTFLAQPCPGLALRIEQ----DSMHLPDAMALLRSFVLPL 180
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSP----WPVDWLDNSDSIARRARCLLPRINTHQTR 243
+ D +VL CTHYP + ++ V +D ++AR+ L +
Sbjct: 181 LDQGADTLVLGCTHYPFVQEQIAAIASAHSTNSVTLIDTGAAVARQLASQLHIQGLLRQD 240
Query: 244 VFDDHALFLSGKPDIAMRRLMQGFGL 269
A S R ++ GL
Sbjct: 241 GAPSVAGLSSANAVDLERAFLRLLGL 266
>gi|253582420|ref|ZP_04859643.1| glutamate racemase [Fusobacterium varium ATCC 27725]
gi|251835959|gb|EES64497.1| glutamate racemase [Fusobacterium varium ATCC 27725]
Length = 263
Score = 195 bits (497), Expect = 4e-48, Method: Composition-based stats.
Identities = 51/259 (19%), Positives = 101/259 (38%), Gaps = 9/259 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
++SI IFDSGIGGL +L+K+R L+P + IY D PY ++ +
Sbjct: 1 MNKESSIGIFDSGIGGLTILKKIRELLPRENIIYYGDWKNNPYSEKSKEDIQNLSAKIMD 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L + VI C+ D L+S + +K A ++ I+++ +
Sbjct: 61 -FLIRNNCKAVVIGCSIFSAASLDFLKSQYNIPIIGMIEGGVKSAILESKQKKIAVMGSA 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ I ++ +S L + +E+ + + ++ +
Sbjct: 120 FTIKSNVYEESIKEIDPNITVYQISCKALCAMLEKGWENYPDRMEILESYLCQ-----IP 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDH 248
D ++L THYP I++ R+ +D+S A +L + + +
Sbjct: 175 DTADTLILGGTHYPFILNDIRKFFSK--KIVDSSVESAIELFRVLGQEDLLREGYKKGRI 232
Query: 249 ALFLSGKPDIAMRRLMQGF 267
+++G ++ Q F
Sbjct: 233 EFYINGDKEVFKNVAEQLF 251
>gi|325290677|ref|YP_004266858.1| glutamate racemase [Syntrophobotulus glycolicus DSM 8271]
gi|324966078|gb|ADY56857.1| glutamate racemase [Syntrophobotulus glycolicus DSM 8271]
Length = 304
Score = 195 bits (497), Expect = 4e-48, Method: Composition-based stats.
Identities = 49/278 (17%), Positives = 85/278 (30%), Gaps = 39/278 (14%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V++++ +P+ +Y D PYG+ + + L
Sbjct: 7 IGVFDSGVGGLTVVKQILASIPDARIVYFGDTARAPYGSRSKEEIIAFSSQIIP-FLISQ 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V ACNT+ ++ F A T++G I +L+T T+
Sbjct: 66 GADIIVAACNTSSANALPVIKKDFDLPIIGPIESGACLAVKMTRNGKIGLLATERTVASE 125
Query: 136 YTSNLI--------------------HSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
+ + + + +E D+
Sbjct: 126 AFHLAVTKVLTKGVRPLAEKSGASGQSGEKPISLVKSQACPLFVPLIEAGLA----DSDQ 181
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235
+ + D I+L CTHYP + L V +D + I R
Sbjct: 182 ARNIVGMYLAPLTEAGVDTIILGCTHYPFLNSAITDLVGEKVVLVDPAVEIVSELRKAFK 241
Query: 236 RINTHQTR--------------VFDDHALFLSGKPDIA 259
I + F+SG P +
Sbjct: 242 EIEKAEKEGSRRQNSREKEDQWKQGQVKYFVSGDPGLF 279
>gi|260771658|ref|ZP_05880578.1| glutamate racemase [Vibrio metschnikovii CIP 69.14]
gi|260613435|gb|EEX38634.1| glutamate racemase [Vibrio metschnikovii CIP 69.14]
Length = 269
Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats.
Identities = 83/248 (33%), Positives = 134/248 (54%), Gaps = 9/248 (3%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+++L + +LIFDSG+GGL V Q++ L+P+ + Y+ D+ +PYG L R+ L
Sbjct: 2 QQQLSHKVLIFDSGVGGLSVYQEIVSLLPQLDYTYLFDNAAYPYGELAQEVLLNRVERLI 61
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
++ + L VIACNTA T++ LR+ S+ +G VPAIK A+ I +++T
Sbjct: 62 ISLVKQQSFDLVVIACNTASTIVLPMLRAKL-SIPVVGVVPAIKPASLVAHKA-IGLIAT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
PAT+ R YT +LI ++ S+ + L+ S L EE G ++ ++E+ +
Sbjct: 120 PATITRQYTHDLIRNFSSKKSVELLGSTRLVDMAEEKLRGQEVDKEELATILSPLI---- 175
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
+R DV VL CTH+PLI +Q+ V +D+ +IARR + LL + + H
Sbjct: 176 -QRIDVAVLGCTHFPLIKAEIQQVLGDDVMLIDSGQAIARRVQQLLDVEPGLKHQHP--H 232
Query: 249 ALFLSGKP 256
+F S P
Sbjct: 233 TIFASAPP 240
>gi|315226136|ref|ZP_07867924.1| glutamate racemase [Parascardovia denticolens DSM 10105]
gi|315120268|gb|EFT83400.1| glutamate racemase [Parascardovia denticolens DSM 10105]
Length = 282
Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats.
Identities = 64/256 (25%), Positives = 99/256 (38%), Gaps = 8/256 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG+ V++++R MP+ I+ D PYG + + + L K
Sbjct: 25 PIGVFDSGMGGISVVRQLRRDMPDQDIIFFGDSANAPYGTRPINEVTDLSFAVADR-LVK 83
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--STPATL 132
VIACNTA + LR + + +G PA+K A Q +L +T TL
Sbjct: 84 QGVKAIVIACNTATSACAPLLRRHY-DIPIIGMEPALKVAIDRGQGKSQHVLVTATKLTL 142
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ L+ I L + VE G + + IE +
Sbjct: 143 EGRKFAALMDRERGNNIIETQPCPDLVTLVEADDLG---DRELVLSTIERYLRPFDLDSL 199
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-HALF 251
D IVL CTH+ FR++ P +D + +R + +L R +
Sbjct: 200 DSIVLGCTHFVFYRRYFREILPDYAAIIDGNQGTSRHVQEVLGYQGKSAERAAGKGTVIL 259
Query: 252 LSGKPDIAMRRLMQGF 267
+ K D LMQ
Sbjct: 260 QNSKTDPQTAALMQAL 275
>gi|323498757|ref|ZP_08103744.1| glutamate racemase [Vibrio sinaloensis DSM 21326]
gi|323316185|gb|EGA69209.1| glutamate racemase [Vibrio sinaloensis DSM 21326]
Length = 262
Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats.
Identities = 81/264 (30%), Positives = 132/264 (50%), Gaps = 12/264 (4%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
Q ++LIFDSG+GGL V +++ ++P+ ++ Y+ D+ +PYG E L R+ L
Sbjct: 1 MSNQANVLIFDSGVGGLSVYEEIARILPQLNYTYIFDNEAYPYGELEHDTLIHRVDALIG 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
++ + + L VIACNTA T++ LR P + +G VPAIK A+ + + +++TP
Sbjct: 61 SLVKEQEIDLVVIACNTASTIVLPTLRQRLP-IPIVGVVPAIKPASNM-ANIAVGLIATP 118
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ R YT +LI S+ + L+ S L EE G + E+ + +
Sbjct: 119 ATVTRQYTHDLIRSFSQSKPVELLGSTRLVDMAEEKLRGKALDLQELSQILAP-----IS 173
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
DV VL CTH+PLI +Q+ V +D+ +IARR + LL +
Sbjct: 174 GHIDVAVLGCTHFPLIKQEIQQVLGSSVLLVDSGKAIARRVQALL---GIEKQEWLGRRE 230
Query: 250 LFLSGKP--DIAMRRLMQGFGLKS 271
+F + P + A+ R + S
Sbjct: 231 IFSTAPPWEEGALNRALTHLEFSS 254
>gi|71908727|ref|YP_286314.1| glutamate racemase [Dechloromonas aromatica RCB]
gi|71848348|gb|AAZ47844.1| glutamate racemase [Dechloromonas aromatica RCB]
Length = 269
Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats.
Identities = 67/257 (26%), Positives = 110/257 (42%), Gaps = 7/257 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
I +FDSG+GGL VL+ +R +P+ F Y AD PYG+ + L++R + L +
Sbjct: 10 NNQPIAVFDSGLGGLTVLRALRDRLPQEDFFYFADTRFLPYGDRPEVFLRERGV-LIAKA 68
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K VIACNTA + + + + P +K A A T+SG+I +L+T T
Sbjct: 69 LAKQGAKALVIACNTATAAAAEAI-RAAIDLPVVALEPGVKPAVALTRSGVIGVLATTRT 127
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L L+ ++ + + + LA +E ++ ++
Sbjct: 128 LASERFQRLVGNHANHLRVIAQACPGLAEAIE----AQGPDSPQVAALLDAFVTPLAAAD 183
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
DV+VL CTHYP + + P LD + +AR+ LL + +
Sbjct: 184 ADVVVLGCTHYPWVAGAIARRMPVGTSLLDTGEPVARQLERLLAASHLL-GGGHGRLTVA 242
Query: 252 LSGKPDIAMRRLMQGFG 268
SG P + + +G
Sbjct: 243 TSGAPAAVSATVERLWG 259
>gi|148652096|ref|YP_001279189.1| glutamate racemase [Psychrobacter sp. PRwf-1]
gi|148571180|gb|ABQ93239.1| glutamate racemase [Psychrobacter sp. PRwf-1]
Length = 340
Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats.
Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 7/241 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL V ++ +P+ HFIY AD + PYG +++ + L
Sbjct: 36 PIGIFDSGVGGLSVYMHLKQALPQEHFIYYADTLNVPYGPRPSSEIQQLSLTAVD-WLVA 94
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L VIACN+A R +P + +G VPA+K A + S +++L+T ATL
Sbjct: 95 AGCKLVVIACNSASAHALHLARQKYPHIPIVGLVPALKPAVLNSTSKNVAVLATKATLDG 154
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ +I Y + ++ V G+ + D + ++ + ++ D
Sbjct: 155 PLLNTVIDEYARPSQVTVI-KWFDPELVPWVEAGMPMDSDTPMR-LKQQLYQFAQQQVDH 212
Query: 195 IVLACTHYPLIVHV-FRQLS--PWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHAL 250
+VL CTHYP +++ + +D+ +IA R + LL + ++ H
Sbjct: 213 LVLGCTHYPFFREFVLAEVAKQGLDIKVVDSGAAIAARVKALLQQQAAAESSTARLGHKF 272
Query: 251 F 251
Sbjct: 273 L 273
>gi|153952784|ref|YP_001393549.1| glutamate racemase [Clostridium kluyveri DSM 555]
gi|219853449|ref|YP_002470571.1| hypothetical protein CKR_0106 [Clostridium kluyveri NBRC 12016]
gi|189030359|sp|A5N4H0|MURI_CLOK5 RecName: Full=Glutamate racemase
gi|254766113|sp|B9DY32|MURI_CLOK1 RecName: Full=Glutamate racemase
gi|146345665|gb|EDK32201.1| MurI [Clostridium kluyveri DSM 555]
gi|219567173|dbj|BAH05157.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 257
Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats.
Identities = 70/257 (27%), Positives = 110/257 (42%), Gaps = 8/257 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I FDSG+GG+ VL++ ++ +F+Y D PYG +KK F + L
Sbjct: 5 DRPIGFFDSGVGGISVLKEAVKILSNENFVYFGDSKMAPYGVRTVEEVKKLT-FNAVEFL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELR-STFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
K V+ACNTA + +LR + M +G PA+K A + G I I++TP T
Sbjct: 64 LKKNIKALVVACNTATSAAIIDLRKAYSKYMPIVGIEPALKPAVECNRKGNIIIMATPMT 123
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L + +NL+ Y S +I + L +EE +EI++ +E I +G
Sbjct: 124 LAESKFNNLMKRY-SNSNILPLPCSGLVELIEEGKTEG----EEIERYLEEKLIPLKGNG 178
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC-LLPRINTHQTRVFDDHAL 250
+VL CTHYP I ++ V LD S R+ + L+ +
Sbjct: 179 IAAVVLGCTHYPFIKKSISKVLNQDVLILDGSKGTVRQLKRQLIKYHIESNKSKIGKIKI 238
Query: 251 FLSGKPDIAMRRLMQGF 267
F S ++ +
Sbjct: 239 FNSMNSQYIIKLSYKLL 255
>gi|238754700|ref|ZP_04616052.1| Glutamate racemase [Yersinia ruckeri ATCC 29473]
gi|238707008|gb|EEP99373.1| Glutamate racemase [Yersinia ruckeri ATCC 29473]
Length = 248
Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats.
Identities = 78/244 (31%), Positives = 130/244 (53%), Gaps = 4/244 (1%)
Query: 29 LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAF 88
Q++R L+P+ H+IY D+V FPYG + + +R++ + + + ++ + VIACNTA
Sbjct: 2 YQEIRQLLPDLHYIYAFDNVAFPYGEKSEEFIVERVVEIVTAVQQQHPLAIVVIACNTAS 61
Query: 89 TLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQC 148
T+ LR F S +G VPAIK AA T++G++ +L+T AT+ R+YT +LI + + C
Sbjct: 62 TVSLPALRERF-SFPVVGVVPAIKPAARLTRNGVVGLLATRATVHRSYTLDLIARFATDC 120
Query: 149 HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV 208
I L+ S L E G ++ +KK + +E D +VL CTH+PL+
Sbjct: 121 KIELLGSSELVELAETKLHGGEVSLSVLKKILNPWLSMREPP--DTVVLGCTHFPLLAEE 178
Query: 209 FRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP-DIAMRRLMQGF 267
Q+ P +D+ +IARR L+ + D+ A L+ A+ ++QG+
Sbjct: 179 LAQVLPEGTRMVDSGAAIARRTAWLISSQENVISTQEDNVAYCLTLDAGTDALLPVLQGY 238
Query: 268 GLKS 271
G +
Sbjct: 239 GFPT 242
>gi|294786553|ref|ZP_06751807.1| glutamate racemase [Parascardovia denticolens F0305]
gi|294485386|gb|EFG33020.1| glutamate racemase [Parascardovia denticolens F0305]
Length = 273
Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats.
Identities = 64/256 (25%), Positives = 99/256 (38%), Gaps = 8/256 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG+ V++++R MP+ I+ D PYG + + + L K
Sbjct: 16 PIGVFDSGMGGISVVRQLRRDMPDQDIIFFGDSANAPYGTRPINEVTDLSFAVADR-LVK 74
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--STPATL 132
VIACNTA + LR + + +G PA+K A Q +L +T TL
Sbjct: 75 QGVKAIVIACNTATSACAPLLRRHY-DIPIIGMEPALKVAIDRGQGKSQHVLVTATKLTL 133
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ L+ I L + VE G + + IE +
Sbjct: 134 EGRKFAALMDRERGNNIIETQPCPDLVTLVEADDLG---DRELVLSTIERYLRPFDLDSL 190
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-HALF 251
D IVL CTH+ FR++ P +D + +R + +L R +
Sbjct: 191 DSIVLGCTHFVFYRRYFREILPDYAAIIDGNQGTSRHVQEVLGYQGKSAERAAGKGTVIL 250
Query: 252 LSGKPDIAMRRLMQGF 267
+ K D LMQ
Sbjct: 251 QNSKTDPQTAALMQAL 266
>gi|261408244|ref|YP_003244485.1| glutamate racemase [Paenibacillus sp. Y412MC10]
gi|261284707|gb|ACX66678.1| glutamate racemase [Paenibacillus sp. Y412MC10]
Length = 258
Score = 195 bits (495), Expect = 7e-48, Method: Composition-based stats.
Identities = 60/256 (23%), Positives = 104/256 (40%), Gaps = 8/256 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSG+GGL VL +P F+++AD + PYG +K + + +
Sbjct: 3 IAFFDSGLGGLTVLTAAMKKLPHEDFLFLADTLHVPYGTKAKEDVKAYIHQAME-TIMQE 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILSTPATLR 133
+ V+ACNTA ++ +LR +P + +G PA+K A + I +L+TP TL+
Sbjct: 62 EVKAIVVACNTATSMAISDLRKAYP-IPVIGMEPAVKPAVEINRASGKRILVLATPLTLK 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ +L+ S + L E + + + F +
Sbjct: 121 ESKYKDLVRRVDSMHIVDSQPLPELVEHCE----ALNFDPEIMNAYFTKKFEAFDLNEYG 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
IVL CTHYP + L P + +D S+ R +L + + D L S
Sbjct: 177 TIVLGCTHYPFYKRILSDLLPDHIRIIDGSEGTVNRLIQVLSDQDLLSSSGSQDVKLLNS 236
Query: 254 GKPDIAMRRLMQGFGL 269
+ +++ + +
Sbjct: 237 SQSAEYTQKMEKALSI 252
>gi|296283687|ref|ZP_06861685.1| glutamate racemase [Citromicrobium bathyomarinum JL354]
Length = 264
Score = 194 bits (494), Expect = 8e-48, Method: Composition-based stats.
Identities = 77/251 (30%), Positives = 121/251 (48%), Gaps = 6/251 (2%)
Query: 12 LQN--SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ ILIFDSG+GGL +L ++R +P+ IY AD G PYG + + R+ L
Sbjct: 1 MNPAAPILIFDSGVGGLTILAELRKTLPQAPVIYAADFAGLPYGTKSEAEVAARVCGLLG 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ ++YQP L IACNTA T+ +R + +G VPAIK AA TQ+G+I +L T
Sbjct: 61 RMAERYQPRLICIACNTASTIALSMVRDVL-EVPIVGTVPAIKPAALATQTGVIGLLGTG 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+R+ Y L + + + +S L E G + E + + + G + +
Sbjct: 120 ATVRQPYVDRLEAEFAADKRLIRHASDALVPLAEAKMRGETLAEGAVAEAVAGLRDDPQA 179
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+ D +VLACTH+PL+ R + + +D + IARR L + +
Sbjct: 180 QDLDTLVLACTHFPLLADELRAVFGQDIQLVDGAQGIARRIASLTQGQDFAREGSDFAV- 238
Query: 250 LFLSGKPDIAM 260
+G +
Sbjct: 239 --ATGSAESLT 247
>gi|37521065|ref|NP_924442.1| glutamate racemase [Gloeobacter violaceus PCC 7421]
gi|81710349|sp|Q7NKI2|MURI_GLOVI RecName: Full=Glutamate racemase
gi|35212061|dbj|BAC89437.1| glutamate racemase [Gloeobacter violaceus PCC 7421]
Length = 265
Score = 194 bits (494), Expect = 9e-48, Method: Composition-based stats.
Identities = 58/251 (23%), Positives = 101/251 (40%), Gaps = 9/251 (3%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+FDSG+GGL VL+++ +P IY AD PYG+ + + + + ++
Sbjct: 4 GLFDSGLGGLTVLREIARRLPAQPVIYFADTARLPYGSRTPAEICRYVREIL-HWFEQQG 62
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
++ACNT+ L + S + PA + AA I +++T AT++
Sbjct: 63 VQRVLMACNTSSALALPVVASEYALKVGGLIAPAARAAARR--GRRIGVIATAATVQSHA 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
+ I + + + V+ VE G ++ +E++ +R D +V
Sbjct: 121 YTRAIQALTPRAQVWEVACPEFVPLVE----GGRLLGEEVRSVARRYLAPLVEQRIDTLV 176
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
CTHYP + V L P V +D + + LP +TR F+SG P
Sbjct: 177 YGCTHYPYLAPVIGDLLPASVRCVDPAVAAVAELAAALPPSRRLETRAA--CHFFVSGDP 234
Query: 257 DIAMRRLMQGF 267
+
Sbjct: 235 VRFAQAAYPWL 245
>gi|71066509|ref|YP_265236.1| glutamate racemase [Psychrobacter arcticus 273-4]
gi|71039494|gb|AAZ19802.1| glutamate racemase [Psychrobacter arcticus 273-4]
Length = 330
Score = 194 bits (494), Expect = 1e-47, Method: Composition-based stats.
Identities = 64/239 (26%), Positives = 103/239 (43%), Gaps = 10/239 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSGIGGL V + +P +IY AD + PYGN + +K + L
Sbjct: 48 SAPIGLFDSGIGGLSVYLHLAHQLPNERYIYYADTLHVPYGNRDSEDIKALTLTAV-KWL 106
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L VIACN+A + R +P + +G VPA+K A ++SG +++L+T ATL
Sbjct: 107 HQQGCKLIVIACNSASAYALETARHHYPQLPIVGLVPALKPAVLASKSGHVAVLATKATL 166
Query: 133 RRTYTSNLIHSYVSQ--CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T +++I S + L VE ++++++ +
Sbjct: 167 NGTLLNDVITKIASPSATRVTKYFDPQLVPWVESGMPENSKTAQNLRQQLQVFAKD---- 222
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPW---PVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
D +VL CTHYP Q + +D+ +IA R + LL +
Sbjct: 223 GIDQLVLGCTHYPFFKDFLMQEIEEQKLSMQVVDSGQAIAERVKQLLITNKLSALPIDG 281
>gi|257468491|ref|ZP_05632585.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185]
gi|317062751|ref|ZP_07927236.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185]
gi|313688427|gb|EFS25262.1| glutamate racemase [Fusobacterium ulcerans ATCC 49185]
Length = 263
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 49/259 (18%), Positives = 102/259 (39%), Gaps = 9/259 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
++SI IFDSGIGGL +L+K+R L+P + IY D PY ++ +
Sbjct: 1 MNKESSIGIFDSGIGGLTILKKIRELLPRENIIYYGDWKNNPYSEKSKEDIQNLSAKIMD 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L + VI C+ D L++ + +K A ++ I+++ +
Sbjct: 61 -FLIRNNCKAVVIGCSIFSAASLDFLKAQYKIPIIGMIEGGVKSAILESKQKKIAVMGSA 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ I + ++ +S L + +E+ + + ++ +
Sbjct: 120 FTIKSNVYEKSIKEINPEITVYQISCKALCTMLEKGWENYSDRIEVLESYLCQ-----IP 174
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDH 248
D ++L THYP I++ ++ +D+S A +L + + +
Sbjct: 175 DTADTLILGGTHYPFILNDIKKFF--NKKIVDSSVESAIELFRILGQEDLLREGYKKGRI 232
Query: 249 ALFLSGKPDIAMRRLMQGF 267
+++G +I + F
Sbjct: 233 EFYINGDKEIFKDVAEKLF 251
>gi|209966583|ref|YP_002299498.1| glutamate racemase [Rhodospirillum centenum SW]
gi|209960049|gb|ACJ00686.1| glutamate racemase [Rhodospirillum centenum SW]
Length = 280
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 64/277 (23%), Positives = 101/277 (36%), Gaps = 26/277 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL VL+ + +P F+Y+ D PYGN + + L
Sbjct: 2 IGVFDSGHGGLTVLRALVDALPGRSFVYLGDHAHAPYGNRTPEEIYGLTVAAVER-LFAQ 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTF---------------------PSMAFLGAVPAIKQA 114
L V+ACNTA L L+ T+ + ++ +PA + A
Sbjct: 61 GCRLVVLACNTASALALRRLQQTWLPCHHPDRRVLGVLVPMVEAITGVPWMADIPAGRHA 120
Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174
++I +T T++ I + + + LA +EE A +I+
Sbjct: 121 GE---PRSVAIFATRRTVQSQAYPREIGKRAPEVEVVQQACPDLARLIEEDAPEAEIRR- 176
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+++ + E ++L CTHYPL+ F P VD LD AR L
Sbjct: 177 AVRRYTASLMDKLEHGTPSAVMLGCTHYPLVAGEFAAALPAGVDVLDQPALCARSLVHYL 236
Query: 235 PRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
R +G R + FG +
Sbjct: 237 ARHPEFDDDGGAPVTFLTTGDAAKVTRLATRFFGRPA 273
>gi|296136513|ref|YP_003643755.1| glutamate racemase [Thiomonas intermedia K12]
gi|295796635|gb|ADG31425.1| glutamate racemase [Thiomonas intermedia K12]
Length = 263
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 65/250 (26%), Positives = 112/250 (44%), Gaps = 9/250 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GGL VL+ +R +P+ IYVAD PYG+ D L++R + ++
Sbjct: 5 PKIGVFDSGVGGLTVLRALRAQLPQASLIYVADSAHAPYGDRPDDFLQQRARQITRFLIG 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ ++ V I + F+G P IK A A + + + +L+TP+TLR
Sbjct: 65 QGARLIVVACNTATAAAIAALRAEF--DLPFVGIEPGIKPALARSDARRVGVLATPSTLR 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
L+H++ + L LA VE ++ ++++ I D
Sbjct: 123 SAKFRALLHTHAAAAEPVLQPCPGLADAVER----GDLQAPQVQQLIRQFCAPLRTAGCD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTHYPL+ + V LD ++ +AR+A L + + + + L+ +
Sbjct: 179 TVVLGCTHYPLLAEQIQAELGPQVHLLDTAEPVARQAARLWQQTSAQRPELP---QLYTN 235
Query: 254 GKPDIAMRRL 263
G + R
Sbjct: 236 GDLAVLRRMA 245
>gi|282856714|ref|ZP_06265980.1| glutamate racemase [Pyramidobacter piscolens W5455]
gi|282585479|gb|EFB90781.1| glutamate racemase [Pyramidobacter piscolens W5455]
Length = 267
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 53/257 (20%), Positives = 102/257 (39%), Gaps = 8/257 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ + +FDSG+GG V+++++ ++P +Y D PYGN + + + L+
Sbjct: 5 SPVGVFDSGVGGFSVVKEIQKVLPGEDVLYYGDSANMPYGNRSGEEILHLTRQILA-FLE 63
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ + +ACNT +L D R +P + A + A + + ++ T T R
Sbjct: 64 RRGVKAAAVACNTISSL-IDRYRDDYP-FKIFSVIEAGAASVATLDADCVGVIGTVFTAR 121
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
LI++ + ++ LA ++ + + E++ +E +
Sbjct: 122 SGAYHRLINAVRPEMKVYAQGCPNLARLIDGGDLRPESIDPELRAAVEPLLAQ---APIR 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++L CTHYPL+ +L P + +D + A + L L S
Sbjct: 179 HLILGCTHYPLVSGYLNRLYPQ-LTLIDPAHEQALAVKRFLESQGLLNDAGSGSLELNTS 237
Query: 254 GKPDIAMRRLMQGFGLK 270
G + FGLK
Sbjct: 238 GDAAQYAE-AARRFGLK 253
>gi|123965917|ref|YP_001010998.1| putative aspartate and glutamate racemases:glutamate racemase
[Prochlorococcus marinus str. MIT 9515]
gi|123200283|gb|ABM71891.1| Putative aspartate and glutamate racemases:Glutamate racemase
[Prochlorococcus marinus str. MIT 9515]
Length = 264
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 52/258 (20%), Positives = 109/258 (42%), Gaps = 11/258 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I IFDSGIGG +L + + Y+AD PYG+ + ++ + +
Sbjct: 1 MKVKIGIFDSGIGGFTILDYLLKTRKDLEIFYLADTKRVPYGDKDFEQIRIIAKEICN-W 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ ++ACNT D L + + ++ + + I +L+TPAT
Sbjct: 60 FEDKNLDALLVACNTTNACALDIL-ENHLGIPVFDLINSVSEIVSK---KCIGVLATPAT 115
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ +Y +I S + + S +E+ K+ +++ + K
Sbjct: 116 IKTSYYKKIIESKGENIKVFQQACPEFVSEIEK----TKLNLNKLNYLSDSYLNPLFKKN 171
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA--RCLLPRINTHQTRVFDDHA 249
+ I+L CTHYPLI +V P + +D S ++ + L+P+ + + + ++
Sbjct: 172 IEEIILGCTHYPLIFNVLENKIPSNIKIIDPSVALVNKFNNSFLIPKNDCNNSISQENVK 231
Query: 250 LFLSGKPDIAMRRLMQGF 267
F++ K + +++
Sbjct: 232 FFVTSKSEEFSKKVKYWL 249
>gi|299137116|ref|ZP_07030299.1| glutamate racemase [Acidobacterium sp. MP5ACTX8]
gi|298601631|gb|EFI57786.1| glutamate racemase [Acidobacterium sp. MP5ACTX8]
Length = 267
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 60/260 (23%), Positives = 103/260 (39%), Gaps = 11/260 (4%)
Query: 12 LQNSI-LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ + I +FDSG GGL VL+ + L+P H+IY+ D PYG+ + + +
Sbjct: 1 MSSPIIGVFDSGFGGLTVLRALLPLVPGAHYIYLGDTARLPYGSKSQTTIARYAVESA-R 59
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L++ L VIACNTA L E+R+ P ++ A S + +L+T A
Sbjct: 60 FLEERGSDLLVIACNTATALALPEIRAAVSVPVVGVIEPVVRAANLQHPSAEVLVLATTA 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + L H + +L VEE + D ++ +E K
Sbjct: 120 TVQS--HAYLQHCEALGLRATEKACPLLVPLVEEGWIDHPVTRDVLRIYLEEALATCSPK 177
Query: 191 RTDVIVLACTHYPLIVHVFR---QLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
++L CTHYPL+ + + +D++ + A P +T +
Sbjct: 178 ---AVLLGCTHYPLLAPLVETTLRELGSQAVVIDSAQATAAEVETHFP-TSTPSSSDAAT 233
Query: 248 HALFLSGKPDIAMRRLMQGF 267
F + + R
Sbjct: 234 FECFATDSVEKFQRLGSLFL 253
>gi|224282549|ref|ZP_03645871.1| glutamate racemase [Bifidobacterium bifidum NCIMB 41171]
gi|310287011|ref|YP_003938269.1| glutamate racemase [Bifidobacterium bifidum S17]
gi|311063884|ref|YP_003970609.1| glutamate racemase MurI [Bifidobacterium bifidum PRL2010]
gi|313139703|ref|ZP_07801896.1| glutamate racemase [Bifidobacterium bifidum NCIMB 41171]
gi|309250947|gb|ADO52695.1| glutamate racemase [Bifidobacterium bifidum S17]
gi|310866203|gb|ADP35572.1| MurI Glutamate racemase [Bifidobacterium bifidum PRL2010]
gi|313132213|gb|EFR49830.1| glutamate racemase [Bifidobacterium bifidum NCIMB 41171]
Length = 269
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 58/271 (21%), Positives = 98/271 (36%), Gaps = 18/271 (6%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I +FDSG+GG+ V++++ MP +Y D PYG +++ +
Sbjct: 1 MTSTAPIGVFDSGLGGISVVRQIVQDMPHERVLYFGDSANAPYGTKTPQEVRRLSFDIME 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA-------------A 116
+ VIACNTA + + LR + + +G PA+K A A
Sbjct: 61 RFM-SQGVKAVVIACNTATSAAVNALRDHY-DIPIIGMEPALKVACDRGDTAAGDGPAPA 118
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
+ + +TP TLR + L+ + + I L VE G D +
Sbjct: 119 RHMPQHVIVAATPLTLREHKFAALMDRFKANNMISPQPCPDLVEIVE---SGRLCDHDLV 175
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
+ + F + D +VL CTH+ FR+L P +D + R +L
Sbjct: 176 MRTLHRYFDGYDLPSIDSVVLGCTHFVFYRDYFRELLPSTTAIIDGNRGTVRHLGMVLES 235
Query: 237 INTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
+ D + + L +
Sbjct: 236 LGKLAPEEMDGGVEIANSDSGERIAALSREL 266
>gi|302391765|ref|YP_003827585.1| glutamate racemase [Acetohalobium arabaticum DSM 5501]
gi|302203842|gb|ADL12520.1| glutamate racemase [Acetohalobium arabaticum DSM 5501]
Length = 250
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 62/253 (24%), Positives = 107/253 (42%), Gaps = 9/253 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I FDSG+GG+ VL++ ++P +IY AD PYG +K + +
Sbjct: 2 KIGFFDSGVGGITVLKEALKVLPNKDYIYYADTANVPYGTKPKEEVKHYVFDAVD-FITD 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
VIACNTA ++ ++LR F +G PA+K A ++ + + +TP TL+
Sbjct: 61 QGINALVIACNTATSVAVNDLRDEF-QFPIIGMEPAVKPAVEKNKTKKVLVTATPLTLQE 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
L+ S+ I + L E + E+ I +E F + R
Sbjct: 120 EKLWELVAKIGSKDIIDSLPLPKLVEFAENFI----FDEETILSYLEERFSSYDLNRYSS 175
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
IVL CTH+ +FR++ P V+ +D + ++ + L + + +F S
Sbjct: 176 IVLGCTHFIFYRRLFRKIIPDDVEIIDGNRGAVKQLKRQLKA---PEHKSGTGEIIFYSS 232
Query: 255 KPDIAMRRLMQGF 267
K ++ +
Sbjct: 233 KKGNEDNIALREY 245
>gi|258542160|ref|YP_003187593.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-01]
gi|256633238|dbj|BAH99213.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-01]
gi|256636297|dbj|BAI02266.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-03]
gi|256639350|dbj|BAI05312.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-07]
gi|256642406|dbj|BAI08361.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-22]
gi|256645461|dbj|BAI11409.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-26]
gi|256648514|dbj|BAI14455.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-32]
gi|256651567|dbj|BAI17501.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654558|dbj|BAI20485.1| glutamate racemase [Acetobacter pasteurianus IFO 3283-12]
Length = 289
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 101/278 (36%), Positives = 146/278 (52%), Gaps = 11/278 (3%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M+ID P L IL FDSGIGGL +++ ++ L P+ Y+AD FPYG +D L
Sbjct: 1 MQIDG-PALSGL-RHILAFDSGIGGLGIVRAIQALAPDICIDYLADTAIFPYGEQDDDFL 58
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+R++ L S + + QP V+ACNTA TL + LR+ +P M F+G VP I+ AA TQ+
Sbjct: 59 IERIVSLLSQAIRRLQPQAVVVACNTASTLALEALRAAWPDMPFVGCVPPIRWAARITQT 118
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+I +L+T AT+RR Y S L Y +C + ++ LA E G + + I +EI
Sbjct: 119 KVIGLLATRATVRRPYLSRLHALYAPECTLIAHAAPGLAGCAELAFRGQDVPDSTILQEI 178
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
EG F+ + R D + L CTHY ++ R LSP + WLD + ++AR LL +
Sbjct: 179 EGLFVHPDSNRLDAVGLGCTHYTFVLDRLRALSPPGLTWLDPAPAVARHTCNLLAHLPQK 238
Query: 241 Q--------TRVFDDHALFLSGKPDIAMRRLMQGFGLK 270
T + DD ALF KP + G+
Sbjct: 239 AHAHPCAWFTALPDDQALFTHLKPYRFSAAAL-WEGVN 275
>gi|304407349|ref|ZP_07389002.1| glutamate racemase [Paenibacillus curdlanolyticus YK9]
gi|304343790|gb|EFM09631.1| glutamate racemase [Paenibacillus curdlanolyticus YK9]
Length = 264
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 57/243 (23%), Positives = 102/243 (41%), Gaps = 9/243 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I FDSGIGGL VL + +P ++Y+AD + PYG +K + ++ +
Sbjct: 2 TIGFFDSGIGGLSVLAESLRRLPAQDYLYMADTLHVPYGTKTKEEVKDYVFEAVERMMSR 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILSTPATL 132
VIACNTA ++ ++LR+T+ S+ +G PA+K A + + +++T TL
Sbjct: 62 -GIDALVIACNTATSIAVEDLRATY-SLPIVGMEPAVKPAVEMNRATGKRVLVMATQLTL 119
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ L+ + + L E ++ +++
Sbjct: 120 QLPKYYALVSRVDEGGIVDSLPLPGLVRYCE----SLQFDPQVMEEYFRAELAPYNLDEY 175
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
+ VL CTHYP ++ R + P + +D + +R LL R + R
Sbjct: 176 GIFVLGCTHYPFYRNILRAMLPPHIQIVDGNAGTVKRLSALLNRFGI-EGRGHGHVDFMC 234
Query: 253 SGK 255
+G
Sbjct: 235 TGN 237
>gi|304439446|ref|ZP_07399355.1| glutamate racemase [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304372042|gb|EFM25639.1| glutamate racemase [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 267
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 58/253 (22%), Positives = 101/253 (39%), Gaps = 10/253 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GG+ VL+++ ++P+ +IY D PYG ++ F+ +D+
Sbjct: 3 KIGIFDSGVGGVSVLKELLKVLPDEEYIYYCDQKNLPYGEKTPGEIRNLTKTSFN-FIDR 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ VIACNTA + L++ F F I + T++ I I++T +T+
Sbjct: 62 QNVDMVVIACNTATANAERYLKAIFGFPIFGIIRSGISEIVKATKNNKILIIATESTVEN 121
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
I S V + L VE I ++ + ++ E D
Sbjct: 122 GIYQEKIKSLVPNADVRAKGCSNLVRAVE----DGHIDDELAVQVVKEYLEEYRDFEFDT 177
Query: 195 IVLACTHYPLIVHVFRQL---SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
+VL CTH+PL ++ V +D + S+A L + L+
Sbjct: 178 LVLGCTHFPLARPAIEKVLEEMDKEVTIVDPAKSLAETVSEFLQDRDFEN--KRSGIKLY 235
Query: 252 LSGKPDIAMRRLM 264
S + + +
Sbjct: 236 TSHSSNDLSKMVK 248
>gi|269123416|ref|YP_003305993.1| glutamate racemase [Streptobacillus moniliformis DSM 12112]
gi|268314742|gb|ACZ01116.1| glutamate racemase [Streptobacillus moniliformis DSM 12112]
Length = 256
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 59/257 (22%), Positives = 110/257 (42%), Gaps = 13/257 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GG+ VL ++R P+ + D PYG + K + +L K
Sbjct: 3 IGIFDSGMGGITVLNEIRKQYPKLDIHFFGDTARLPYGEKSKEEIIKYSTEIVEFLLTK- 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ L V+ACNTA +L DE++ + ++ +G + A +S + +++T AT+
Sbjct: 62 EVELIVVACNTATSLALDEIKEKY-NINIIGVIEAGVNGVINNKSKNVGLIATTATVNSK 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ ++ SQ I + +L +E + I + + K D +
Sbjct: 121 KYTQSLNFVNSQIKIIERACPLLVPTIENGNINGAYINELINEYVNHM-----SKEIDTL 175
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF-LSG 254
+L CTHY ++ + L ++ +D S I + ++ N + + + F +SG
Sbjct: 176 ILGCTHYSILKETIKSLY-SNINIIDPSVEIVK----IINNNNLIKCKDENSKTFFYVSG 230
Query: 255 KPDIAMRRLMQGFGLKS 271
L F ++S
Sbjct: 231 SKLQFENNLKNIFSIES 247
>gi|325104671|ref|YP_004274325.1| glutamate racemase [Pedobacter saltans DSM 12145]
gi|324973519|gb|ADY52503.1| glutamate racemase [Pedobacter saltans DSM 12145]
Length = 270
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 64/262 (24%), Positives = 105/262 (40%), Gaps = 8/262 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ I IFDSGIGGL V +R ++P+ IY D PYG+ A++ + +
Sbjct: 1 MIAEQPIGIFDSGIGGLTVANAIRKVLPKEKIIYFGDTGHMPYGDKSPDAIRYYSLKI-G 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPS--MAFLGAVPAIKQAAAYTQSGLISILS 127
L++ + VIACNTA +L D+L P + Q I ++
Sbjct: 60 KFLEEKGCKVIVIACNTASSLAYDDLVQFMGDRIPILNVIDPVVHYVTDDMQYQKIGVIG 119
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT+ + + ++ +++ +LA +EE I IE
Sbjct: 120 TKATISSDVYARKLKERNLGLQVNSLATPLLAPMIEEGFFENNIS----HTVIESYLSSP 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD- 246
+ + D ++LACTHYPLI VD L+ + +A + L ++ + D
Sbjct: 176 QLQNIDALILACTHYPLIKREIESFFNNQVDILNTASIVADDVKLQLEKLQLLNNQSLDY 235
Query: 247 DHALFLSGKPDIAMRRLMQGFG 268
++S K FG
Sbjct: 236 KDEFYVSFKTPSFECSTKIFFG 257
>gi|290967732|ref|ZP_06559287.1| glutamate racemase [Megasphaera genomosp. type_1 str. 28L]
gi|290782248|gb|EFD94821.1| glutamate racemase [Megasphaera genomosp. type_1 str. 28L]
Length = 267
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 56/258 (21%), Positives = 94/258 (36%), Gaps = 7/258 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
K + I IFDSG+GGL V+ K+R L+P + IYV D PYG+ + +
Sbjct: 3 KSKLPIGIFDSGVGGLTVVNKLRMLLPHENIIYVGDTKRNPYGSRTAAEILSYTRDIL-R 61
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+ L I CNT + +L P +G IK A + G I++ +T
Sbjct: 62 FMSAQSVKLVAIGCNTVTATVYPQLMQEVP-YPLIGMSKGIKTAQKISAGGTIAVFATEL 120
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ ++ I LA +E +I ++
Sbjct: 121 TIANHSHKKAAAAWDPGLKIIEQPCPELAGLIERGYLQGT----KIMAPLQKYLAPVLQT 176
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHA 249
+ D + CTH+P I +F LS + ++D + +A +L + +
Sbjct: 177 QADTAIFGCTHFPFIQPLFEMLSQDRLAFVDPAHEMALEVLEVLKKADLLNRNSHSGTLQ 236
Query: 250 LFLSGKPDIAMRRLMQGF 267
L + + Q
Sbjct: 237 LCFTDATERGGMLAAQLI 254
>gi|288959026|ref|YP_003449367.1| glutamate racemase [Azospirillum sp. B510]
gi|288911334|dbj|BAI72823.1| glutamate racemase [Azospirillum sp. B510]
Length = 299
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 64/278 (23%), Positives = 105/278 (37%), Gaps = 21/278 (7%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
++L+ I +FDSG GGL VL+ + P F+Y+ D PYG + + + +
Sbjct: 15 RRLKQLIGVFDSGHGGLTVLRALVDAAPGRPFVYLGDHAAAPYGPRSEDDIYRLTIAGMD 74
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTF-----PSMAFLGAVPAIKQAAAYTQSGL-- 122
L L VIACNTA + L+ + P LG + + +A +
Sbjct: 75 R-LFAQGCRLVVIACNTAAAVALRRLQQEWLPSAHPGRNVLGVLVPMVEAITRVPWMIDT 133
Query: 123 -----------ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
+ I +T AT+ I + + L +E A +I
Sbjct: 134 VPPDHLAEPRTVGIFATLATVNSGSFPREIGKRAPSVRVVQQACPDLVPLIERGAADGEI 193
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
E + + + + D +VL CTHYPL+ H+F + P V+ L AR
Sbjct: 194 -EPAVAGYVRVLLDKLGRQPLDAVVLGCTHYPLVRHLFARALPPGVEILSQPTLTARSLE 252
Query: 232 CLLPRINTHQTRVFD-DHALFLSGKPDIAMRRLMQGFG 268
R ++ + D F +G + + FG
Sbjct: 253 QYFGRHPEYRPDPAEHDLKFFTTGDAALVSELAGRFFG 290
>gi|332978147|gb|EGK14883.1| glutamate racemase [Desmospora sp. 8437]
Length = 206
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 47/204 (23%), Positives = 88/204 (43%), Gaps = 5/204 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++I I DSG+GGL V++++ +P +Y D + PYG +++ + + L
Sbjct: 8 DSAIGILDSGVGGLTVVREVFRQLPNEKILYFGDTLRCPYGPRSSDEVRRFTLEIV-RHL 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
Y VIACNTA L +E+R P + A ++ G + ++ T T+
Sbjct: 67 SGYPLKALVIACNTATALALEEVRHQVDVPVLGVIEPGARAAIKVSRRGRVGVIGTEGTI 126
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R + + + ++ + L VE ++ +E +K + + R
Sbjct: 127 RSSAYERALKRIDPRLYVVSLPCPALVPLVE----SGGVENEESRKILRESLAPLKSHRL 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWP 216
+ ++L CTHYPLI + +
Sbjct: 183 ESLILGCTHYPLIASMISREMGPG 206
>gi|218516359|ref|ZP_03513199.1| glutamate racemase [Rhizobium etli 8C-3]
Length = 236
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 125/236 (52%), Positives = 171/236 (72%)
Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95
MPE FIYVADD GFPYG WE+ ALK+R++ LF +L Y P + +IACNTAFTL+ +L
Sbjct: 1 MPERGFIYVADDAGFPYGGWEEQALKERIIGLFGKLLTDYDPEVCIIACNTAFTLVGADL 60
Query: 96 RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS 155
R+ FP M F+G VPAIK AA T+SGL+S+L+TP T++R YT +LI S+ QC++ LV S
Sbjct: 61 RAAFPQMTFVGTVPAIKPAAERTRSGLVSVLATPGTVKRAYTRDLIQSFAQQCNVRLVGS 120
Query: 156 MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW 215
LA E Y G + +D + EI+ CF+EK+ ++TD++VLACTHYP + ++FR+++PW
Sbjct: 121 ENLARMAEAYIRGDTVSDDAVLAEIDQCFVEKDDQKTDIVVLACTHYPFMANLFRRIAPW 180
Query: 216 PVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
PVDWLD +++IARRAR L+P + D A+F SG+ D A RRLMQGFGL++
Sbjct: 181 PVDWLDPAEAIARRARTLVPLVADAVHPDNFDFAVFTSGQQDFATRRLMQGFGLRA 236
>gi|126640457|ref|YP_001083441.1| glutamate racemase [Acinetobacter baumannii ATCC 17978]
Length = 256
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 54/246 (21%), Positives = 110/246 (44%), Gaps = 11/246 (4%)
Query: 26 LIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACN 85
+ V ++ +P +Y AD PYG D +++ L + ++V+ACN
Sbjct: 1 MSVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRELTARAVD-WLYRQGCKIAVVACN 59
Query: 86 TAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSY 144
TA D LR + +G VPA+K A T+S ++++L+TPAT R +++ +
Sbjct: 60 TASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVAVLATPATFRGQLIKDVVEKF 119
Query: 145 V--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ + ++S+ L VE + + +++ ++ + D +VL CTHY
Sbjct: 120 AVPAGVKVMTLTSLELVPCVEAGQQMSPVCLNALREVLQ----PAVEQGADYLVLGCTHY 175
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH---ALFLSGKPDIA 259
P + L +D+ ++AR+ +L + ++ + ++SG A
Sbjct: 176 PFLNEAIHHLFDNQFTLVDSGLAVARQTARILIKNELLCDQIRQNVARIECYVSGNNADA 235
Query: 260 MRRLMQ 265
++ ++Q
Sbjct: 236 LQPVLQ 241
>gi|90021260|ref|YP_527087.1| glutamate racemase [Saccharophagus degradans 2-40]
gi|89950860|gb|ABD80875.1| glutamate racemase [Saccharophagus degradans 2-40]
Length = 272
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 89/246 (36%), Positives = 134/246 (54%), Gaps = 4/246 (1%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
++L+FDSG GGL + K+ L + +Y AD+ FPYG AL++R++ +
Sbjct: 10 PNTPTVLVFDSGAGGLSICTKIMALRNDCAIVYAADNAYFPYGELSTSALRQRVITFMGE 69
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++D+Y P ++VIACNTA T + +LR TF + F+G VPAIK AA TQ+G I+IL+T A
Sbjct: 70 LIDQYSPSIAVIACNTASTALLADLRETF-DIPFVGVVPAIKPAATATQTGTIAILATSA 128
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ R YT +LI+ + + L S+ L S E+ + I+ + F + +
Sbjct: 129 TVTRDYTRDLINEFAPNKTVILHSAQPLVSAAEQLIQNNQCPNSAIQGALSELFAKPGAE 188
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D IVLACTH+PL+ + L P + LD+ D+IARR LL NT + L
Sbjct: 189 HIDTIVLACTHFPLLREAIQALLPASITLLDSGDAIARRVDSLLCATNTLKQTQRISVHL 248
Query: 251 ---FLS 253
+
Sbjct: 249 SKPCTT 254
>gi|329922868|ref|ZP_08278384.1| glutamate racemase [Paenibacillus sp. HGF5]
gi|328941641|gb|EGG37926.1| glutamate racemase [Paenibacillus sp. HGF5]
Length = 258
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 61/256 (23%), Positives = 106/256 (41%), Gaps = 8/256 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSG+GGL VL +P F+++AD + PYG +K + I+ +
Sbjct: 3 IAFFDSGLGGLTVLTAAMKKLPHEDFLFLADTLHVPYGTKAKEDVKAYIHQAMG-IIMQE 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILSTPATLR 133
+ V+ACNTA ++ +LR +P + +G PA+K A + I +L+TP TL+
Sbjct: 62 EVKAIVVACNTATSMAISDLRKAYP-IPVIGMEPAVKPAVEINRASGKRILVLATPLTLK 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ +L+ S + + L E + + + F +
Sbjct: 121 ESKYKDLVRRVDSMHIVDSLPLPELVEHCE----ALNFDPEIMNAYFTKKFEAFDLNEYG 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
IVL CTHYP + L P + +D S+ R +L + + D L S
Sbjct: 177 TIVLGCTHYPFYKRILSDLLPDHIRIIDGSEGTVNRLIQVLSDQDLLSSSGSQDVKLLNS 236
Query: 254 GKPDIAMRRLMQGFGL 269
+ +++ + +
Sbjct: 237 SQSAEYTQKMEKALSI 252
>gi|71892359|ref|YP_278093.1| glutamate racemase [Candidatus Blochmannia pennsylvanicus str.
BPEN]
gi|71796465|gb|AAZ41216.1| glutamate racemase [Candidatus Blochmannia pennsylvanicus str.
BPEN]
Length = 277
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 70/260 (26%), Positives = 125/260 (48%), Gaps = 6/260 (2%)
Query: 6 YPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
Y Q +ILI DSG+GGL + +R L+P ++Y D+ FPYG + + R+
Sbjct: 3 YFKNTHKQPTILILDSGVGGLSIYIAIRKLLPHVRYLYFFDNQAFPYGEHSEFFIINRVT 62
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI 125
+ + +++Q L +I CNTA + L++ F +G +PAIK A+ T++G+I +
Sbjct: 63 SIIEAVQEQHQLDLVIIGCNTASVVSLKILQNHFLC-PIVGVIPAIKLASKLTKNGVIGV 121
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
L+T T+ YT +LI + ++ + L+ + L + E G KI ++ +
Sbjct: 122 LATHRTVNHDYTLSLIKRFANKYKVMLLGTSELVNLAESKIHGKKIPISILRDILTPWLN 181
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
K+ D IVL CTH+ L+ +D+ S+A+ + LL + T F
Sbjct: 182 MKQPP--DTIVLGCTHFSLLKTELIAALSSNSYLIDSRHSVAKYSFRLLRKNTNSPTNDF 239
Query: 246 DDHA---LFLSGKPDIAMRR 262
+ ++ S + A++
Sbjct: 240 CSYRPNKIYCSMNTEKAIKL 259
>gi|312884421|ref|ZP_07744126.1| glutamate racemase [Vibrio caribbenthicus ATCC BAA-2122]
gi|309367943|gb|EFP95490.1| glutamate racemase [Vibrio caribbenthicus ATCC BAA-2122]
Length = 274
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 82/259 (31%), Positives = 125/259 (48%), Gaps = 11/259 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q ILIFDSG+GGL V +++ +P ++ Y+ D+ +PYG E L R+ L +
Sbjct: 15 QTKILIFDSGVGGLSVFKEIEAKLPALNYFYIFDNAAYPYGELEHETLTARVETLVCQYV 74
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K L VIACNTA T++ LR+ S+ +G VPAIK A+ + I +++TPAT+
Sbjct: 75 KKLDIDLVVIACNTASTIVLPMLRARL-SIPVVGVVPAIKPASNL-ANKAIGLIATPATI 132
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R YT LI+ + I ++ S L EE G I E++ +
Sbjct: 133 TRQYTRELINDFSQSKPIKMIGSTRLVDMAEEKLRGAAIDLKELEHILGPM-----KNNI 187
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
DV VL CTH+PLI + + + V +D+ +IARR LL T ++
Sbjct: 188 DVAVLGCTHFPLIKNEIQSVLGSEVLLIDSGVAIARRVESLLT--PTAGAGEQGQREIYS 245
Query: 253 SGKP--DIAMRRLMQGFGL 269
+ P + A+ + F
Sbjct: 246 TAPPWKEKALNVALTSFKF 264
>gi|78212667|ref|YP_381446.1| glutamate racemase [Synechococcus sp. CC9605]
gi|123578331|sp|Q3AKJ1|MURI_SYNSC RecName: Full=Glutamate racemase
gi|78197126|gb|ABB34891.1| Glutamate racemase [Synechococcus sp. CC9605]
Length = 265
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 59/256 (23%), Positives = 100/256 (39%), Gaps = 13/256 (5%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
FDSG+GGL VL+++ +Y+ D PYGN + +++ + L +
Sbjct: 7 GFFDSGLGGLTVLRRVLERHGSVPCVYLGDTARVPYGNRQPDDIRRIAAEVVG-WLRDQK 65
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACNT L R A + I AAA ++ + +L+TPAT+ +
Sbjct: 66 VSTVVMACNTTNAL----ARDVADGQAGAPVIGLIGAAAAMVETRRVGVLATPATVASSA 121
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
I + + + +E + D++++ + + IV
Sbjct: 122 YRASIEALHPGSMVIEQACPAFVPLIE----SGDMNSDDLRRAAQAYLEPLLAASVESIV 177
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD----DHALFL 252
L CTHYPL+V + RQL P V +D + +AR+ +L +
Sbjct: 178 LGCTHYPLLVPLLRQLLPESVQIIDPAIGVARQLDAVLRSPGPISAVPRPFSLESCRFCV 237
Query: 253 SGKPDIAMRRLMQGFG 268
+ PD R G
Sbjct: 238 TADPDGFAMRATPWLG 253
>gi|313904511|ref|ZP_07837887.1| glutamate racemase [Eubacterium cellulosolvens 6]
gi|313470653|gb|EFR65979.1| glutamate racemase [Eubacterium cellulosolvens 6]
Length = 269
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 8/233 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+++ +PE F+Y D PYG E +++ M + ++
Sbjct: 14 IGVFDSGVGGLSVLKELVKELPEEDFLYFGDSANAPYGEKEIGTIRELSMKIADRMVAD- 72
Query: 76 QPVLSVIACNTAFTLIKDELRS-TFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
VIACNTA + E+R+ M +G PA+K AA + + G I +++TPATL+
Sbjct: 73 GVKTIVIACNTATSAAVKEIRAKYQERMPIIGIEPALKPAARWKRHGRILVMATPATLKL 132
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+L H + V LASRVE+ + + +++ + + D
Sbjct: 133 EKYEDLSHRLEGEAEFIPVMCTGLASRVEKGKLEEEDLHELLEELLGPY-----RGKVDG 187
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
IVL CTHYP + R + + D + A L + + + D
Sbjct: 188 IVLGCTHYPFVKKQIRSVMG-DIPMFDGGEGTAHELHRQLEKHGLLKKKESGD 239
>gi|326790779|ref|YP_004308600.1| glutamate racemase [Clostridium lentocellum DSM 5427]
gi|326541543|gb|ADZ83402.1| glutamate racemase [Clostridium lentocellum DSM 5427]
Length = 253
Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats.
Identities = 61/253 (24%), Positives = 110/253 (43%), Gaps = 6/253 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ IFDSG+GG+ VL+ L+P+ +IY +D+ PYG + + + + L
Sbjct: 2 KVGIFDSGVGGITVLKTALKLLPQVDYIYYSDNNHVPYGTKTKEEVLGYVNDVVA-FLIS 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
Q VIACNTA ++ LRS +P + +G PA+K A + G + + +T TL+
Sbjct: 61 QQVDAIVIACNTATSIAVKTLRSRYP-VPIIGMEPAVKLAFNHHSDGKVLVTATSLTLKE 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
NL++ + + ++ L + E + E +IK + + +
Sbjct: 120 EKFKNLVNRLGEEERVCTLALPELVTFAEAFM----FDEAQIKAYFKEKLKDYPLEEIVA 175
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
IVL CTH+ + ++ P + D ++ R + L+ R + + SG
Sbjct: 176 IVLGCTHFVYFKKILKECLPPHITVYDGNEGTIRHLKELIDSEKVMHIRKEPEVTFYYSG 235
Query: 255 KPDIAMRRLMQGF 267
K + L +
Sbjct: 236 KRCESKELLNKYL 248
>gi|326387672|ref|ZP_08209278.1| glutamate racemase [Novosphingobium nitrogenifigens DSM 19370]
gi|326207718|gb|EGD58529.1| glutamate racemase [Novosphingobium nitrogenifigens DSM 19370]
Length = 285
Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats.
Identities = 88/244 (36%), Positives = 122/244 (50%), Gaps = 3/244 (1%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
IL+FDSG+GGL VL KMR L+P+ IYVAD+ G PYG + + R+ L + +
Sbjct: 26 QPILMFDSGVGGLSVLAKMRLLLPQAPVIYVADNAGLPYGQKTEAQIAARVSGLLGRMTE 85
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ P L IACNTA T+ +R + +G VPAIK AAA T++G+I +L T AT+R
Sbjct: 86 RLHPRLVCIACNTASTIALASVREVL-EVPIVGTVPAIKPAAAMTKTGVIGLLGTEATIR 144
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ Y L + + + + L + E G + + + +G R D
Sbjct: 145 QGYVDRLESEFAADKRLLRHGAPELVTAAEARLRGRDVDPAVFARAAQALRSMPDGDRID 204
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VLACTH+PLI Q V ++D SD IARR L R D ALF
Sbjct: 205 TVVLACTHFPLIERDLAQAFGPDVRFIDGSDGIARRIAHLTQGQEFL--RKEPDLALFTR 262
Query: 254 GKPD 257
PD
Sbjct: 263 ADPD 266
>gi|301596669|ref|ZP_07241677.1| glutamate racemase [Acinetobacter baumannii AB059]
Length = 256
Score = 192 bits (489), Expect = 4e-47, Method: Composition-based stats.
Identities = 53/246 (21%), Positives = 109/246 (44%), Gaps = 11/246 (4%)
Query: 26 LIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACN 85
+ V ++ +P +Y AD PYG D +++ L + ++V+ACN
Sbjct: 1 MSVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRELTARAVD-WLYRQGCKIAVVACN 59
Query: 86 TAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSY 144
TA D LR + +G VPA+K A T+S ++++L+TPAT R +++ +
Sbjct: 60 TASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVAVLATPATFRGQLIKDVVEKF 119
Query: 145 V--SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ + ++S+ L VE + + +++ ++ + D +VL CTHY
Sbjct: 120 AVPAGVKVMTLTSLELVPCVEAGQQMSPVCLNALREVLQ----PAVEQGADYLVLGCTHY 175
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH---ALFLSGKPDIA 259
P + L +D+ ++AR+ +L + ++ + ++SG
Sbjct: 176 PFLNEAIHHLFDNQFTLVDSGLAVARQTARILIKNELLCDQIRQNVARIECYVSGNNADV 235
Query: 260 MRRLMQ 265
++ ++Q
Sbjct: 236 LQPVLQ 241
>gi|319942509|ref|ZP_08016819.1| hypothetical protein HMPREF9464_02038 [Sutterella wadsworthensis
3_1_45B]
gi|319803912|gb|EFW00830.1| hypothetical protein HMPREF9464_02038 [Sutterella wadsworthensis
3_1_45B]
Length = 271
Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats.
Identities = 63/267 (23%), Positives = 106/267 (39%), Gaps = 17/267 (6%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I I DSG GGL V + +R +P ++ AD PYG+ ++ RL + S
Sbjct: 1 MSSNRPIGILDSGFGGLSVARAIRAAIPNEDLVFAADCAYAPYGDNSSEYIQARLEHVVS 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L Q V ACNTA + R+ SM +G PA+ A +T++G I +L+T
Sbjct: 61 -FLLAQQVKALVFACNTATAVGIRAFRARL-SMPIIGIEPAVFPALRHTRTGHIGVLATC 118
Query: 130 ATLRRTYTSNLIHSYVSQCH--------IHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
T+ +++ H + + V L VE + + +
Sbjct: 119 RTIESQKYADVRHRAIEWAEVSRPMPVTVWDVPCPGLMECVER----GDFDSANVHELLV 174
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
D IVL CTHYP + + + +P +D + ++A++ L ++
Sbjct: 175 RYVDPLTAHNVDEIVLGCTHYPFLANAIAKHAPK-ATLIDPAPAVAQQLERRLAALDLAT 233
Query: 242 TRVFDDH-ALFLSGKPDIAMRRLMQGF 267
+ F SG D A +++
Sbjct: 234 PQTAPGTERFFASG-ADAAREAVLRTL 259
>gi|254785730|ref|YP_003073159.1| glutamate racemase [Teredinibacter turnerae T7901]
gi|237683438|gb|ACR10702.1| glutamate racemase [Teredinibacter turnerae T7901]
Length = 283
Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats.
Identities = 85/248 (34%), Positives = 126/248 (50%), Gaps = 4/248 (1%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P IL+ DSG GGL V +++ P+ Y AD GFPYG D L +RL+
Sbjct: 5 PTLASKNARILVLDSGAGGLTVAREILHRNPDVSMDYFADIAGFPYGTMPDDVLIRRLVS 64
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
L + L + QP + V+ACNTA TL LR+ +P++ F+G VPAIK AA+ T++G+I +L
Sbjct: 65 LVGNCLSQRQPDIVVLACNTASTLALRALRARYPTVEFVGVVPAIKPAASITRTGVIGLL 124
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+TPAT+ R YT LI + + S L E+ G K + +E+ +
Sbjct: 125 ATPATVNRDYTRQLIEDFAGNHEVVTHGSNPLVVCAEQLLQGTKPDTGILIEELGKLRTK 184
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSP--WPVDWLDNSDSIARRARCLLPRINTHQTRV 244
D IVLACTH+PL++ F + P + W+D+ +IA R LL ++ +
Sbjct: 185 STAGSVDTIVLACTHFPLLLPYF-KALPSCESISWVDSGSAIANRVHHLLQKLG-QRDHS 242
Query: 245 FDDHALFL 252
Sbjct: 243 HSKITFIA 250
>gi|148239373|ref|YP_001224760.1| glutamate racemase [Synechococcus sp. WH 7803]
gi|147847912|emb|CAK23463.1| Glutamate racemase [Synechococcus sp. WH 7803]
Length = 268
Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 96/260 (36%), Gaps = 12/260 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + FDSG+GGL VL+++ IY+ D PYG+ ++ + +
Sbjct: 1 MSIRLGFFDSGLGGLTVLRRVLESHGGVPTIYLGDTARVPYGSRSPSEIRAIASEVVA-W 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L Q V+ACNT L R A + V I AAA + + +L+TPAT
Sbjct: 60 LRDQQVTTVVMACNTTNAL----ARDVTEGQAGVPVVGLIGAAAAMVRDSRVGVLATPAT 115
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ I + + + +E G D ++
Sbjct: 116 VASGAYRESIEALHPGTLVVQQACPDFVPLIEAGDLGC----DALRSAAIHYLQPLLEAS 171
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI---NTHQTRVFDDH 248
IVL CTHYPL++ + L P + +D + +A + LL + Q +
Sbjct: 172 VQSIVLGCTHYPLLLPLLSNLLPESIRLIDPALGVASQLDALLGKPVPGGLDQPLALEAT 231
Query: 249 ALFLSGKPDIAMRRLMQGFG 268
+ ++ P R G
Sbjct: 232 RICVTSDPQGFADRSTPWLG 251
>gi|159903573|ref|YP_001550917.1| putative aspartate and glutamate racemases:glutamate racemase
[Prochlorococcus marinus str. MIT 9211]
gi|159888749|gb|ABX08963.1| Putative aspartate and glutamate racemases:Glutamate racemase
[Prochlorococcus marinus str. MIT 9211]
Length = 267
Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats.
Identities = 49/261 (18%), Positives = 110/261 (42%), Gaps = 11/261 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ + IFDSG+GGL VL+ + + + +Y+AD PYG ++ + L
Sbjct: 1 MKPLLGIFDSGVGGLTVLKNVLYRHGDLSAVYLADTARIPYGVKSPLEIQTIALGLVE-W 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ + +ACNT +L ++ + S+ +G + ++ ++ I +L+TP+T
Sbjct: 60 LNMQNISVLAVACNTTDSLAIKIVKQ-YSSVPVVGLIDSVGDLVFESR---IGVLATPST 115
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ +I + + + +E +I +E + +
Sbjct: 116 TESRAYTKVIMASNPNAFVIEQACPAFVPLIET----GQINSNEFQIVAKNYLKPLIDSN 171
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--DHA 249
+ I+L C+HYPL+ ++L P V +D S ++++ L+ + + + +
Sbjct: 172 VEAIILGCSHYPLLKSRLQELLPKHVRLIDPSIGLSQKLDDLIGYQSFVEKSIPTFCNVR 231
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
+ + R+ + G+
Sbjct: 232 FCATSDSEGFASRISRWLGIH 252
>gi|309388889|gb|ADO76769.1| glutamate racemase [Halanaerobium praevalens DSM 2228]
Length = 277
Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats.
Identities = 51/267 (19%), Positives = 107/267 (40%), Gaps = 9/267 (3%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ + +I + DSG+GGL V ++ +P + +Y D + PYG ++ + + +
Sbjct: 3 ENSKKAIGLLDSGVGGLTVAFEIFKFLPRENIVYFGDTLHLPYGPKSLSVVRTYVEKIIN 62
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
++++ + +IACNTA + D ++ F F A +A T+ I+++ T
Sbjct: 63 YLIEEKKVKAIIIACNTATSAALDYVKDKFEVPIFGMIKRAAFKAVTLTKKKKIAVIGTE 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ I S ++ ++ + VE E++K + +
Sbjct: 123 GTIKSQVYQQAILSRNTEIEVYTRICPEFVTLVEAGIFKG----PEVRKIADFYLKPLKN 178
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR--ARCLLPRINTHQTRVFDD 247
D ++LACTH+P + + L V ++ + + + Q F
Sbjct: 179 YGVDTLILACTHFPYLTPIIADLMGAKVKLVNPASELVAELQNTLSNLNLLNSQNDNFTQ 238
Query: 248 HALFLSGKPD---IAMRRLMQGFGLKS 271
H L +S K ++ L++
Sbjct: 239 HQLLVSKKQKISTKFLQNGSSFLDLEA 265
>gi|88808406|ref|ZP_01123916.1| Glutamate racemase [Synechococcus sp. WH 7805]
gi|88787394|gb|EAR18551.1| Glutamate racemase [Synechococcus sp. WH 7805]
Length = 268
Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats.
Identities = 57/255 (22%), Positives = 97/255 (38%), Gaps = 12/255 (4%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+FDSG+GGL VL+++ IY+ D PYG+ ++ + + L +
Sbjct: 6 GLFDSGLGGLTVLRRVLERHGAVPTIYLGDTARVPYGSRSPSEIRVIASEVVA-WLRHQK 64
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACNT L R A + V I AAA + + +L+TPAT+
Sbjct: 65 VTTVVMACNTTNAL----ARDVAEGKAGVPVVGLIGAAAAMVRESRVGVLATPATVASGA 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
+ I + + + +E + DE+ + IV
Sbjct: 121 YRDSIEALHPGTLVVQQACPDFVPLIE----AGDLNCDELYRAAIRYLQPLLEASVQSIV 176
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI---NTHQTRVFDDHALFLS 253
L CTHYPL++ + L P + +D + +A + LL + Q ++++
Sbjct: 177 LGCTHYPLLLPLLSNLLPESIRLIDPALGVASQLDVLLGQPLPGGLDQPLALGATHIYVT 236
Query: 254 GKPDIAMRRLMQGFG 268
P R G
Sbjct: 237 SDPQGFADRATPWLG 251
>gi|294011705|ref|YP_003545165.1| glutamate racemase [Sphingobium japonicum UT26S]
gi|292675035|dbj|BAI96553.1| glutamate racemase [Sphingobium japonicum UT26S]
Length = 267
Score = 192 bits (487), Expect = 5e-47, Method: Composition-based stats.
Identities = 82/258 (31%), Positives = 129/258 (50%), Gaps = 3/258 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
Q +L FDSG+GGL +L + +P +Y AD GFPYG + + R+ L ++
Sbjct: 6 QAPLLFFDSGVGGLSILAPAQAALPHAPVVYAADSAGFPYGTRSEAEIAARVPALLGRLV 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++Y+P L+VIACNTA T+ +R+ + +G VPAIK AA +QS + +L T AT+
Sbjct: 66 ERYRPRLAVIACNTASTIALSAVRAAL-DIPVVGTVPAIKPAALLSQSRVFGVLGTDATV 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R+ Y L + S C + S L E G + + + G F + G R
Sbjct: 125 RQPYVDRLAAEHGSDCTVLRHGSAALVQLAEAKLRGEPLDPAVARDALAGLFDQPGGDRM 184
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D++VLACTH+PL+ SP P+ ++ + IARR L + + A+F
Sbjct: 185 DIVVLACTHFPLVEAELAAASPRPLRFVHGGEGIARRIA-YLTQGQPWPSEPQPGTAVFT 243
Query: 253 S-GKPDIAMRRLMQGFGL 269
+ +R ++ +GL
Sbjct: 244 RLDESVERLRPALESYGL 261
>gi|302335208|ref|YP_003800415.1| glutamate racemase [Olsenella uli DSM 7084]
gi|301319048|gb|ADK67535.1| glutamate racemase [Olsenella uli DSM 7084]
Length = 257
Score = 192 bits (487), Expect = 5e-47, Method: Composition-based stats.
Identities = 62/239 (25%), Positives = 92/239 (38%), Gaps = 7/239 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ +FDSG+GG+ VL+ + +P F Y D PYG + + D+ +
Sbjct: 8 VGVFDSGVGGISVLRHLVDELPHEDFCYFGDSANNPYGGKTPDEILSLSRGIVDDMAAR- 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
VIACNTA ++ LR +P + +G PAI+ A + I +++T TL
Sbjct: 67 GAKAVVIACNTATSVAAARLRLEYPDLPIVGVEPAIRPATRAPRHERILVMATQVTLALD 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L S I + LA R+E+ I+ + D +
Sbjct: 127 KYHRLAEECGSSSQILGEPCVGLAHRIEQGNLDAPDLHGLIETLVGRY-----RGTVDSV 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
VL CTHYP + R + V D ARR R LL + F S
Sbjct: 182 VLGCTHYPFVRAQIRDVVG-DVPLFDGGTGAARRLRSLLAERDLLAEGDAPGSVAFASS 239
>gi|154501141|ref|ZP_02039179.1| hypothetical protein BACCAP_04830 [Bacteroides capillosus ATCC
29799]
gi|150269833|gb|EDM97368.1| hypothetical protein BACCAP_04830 [Bacteroides capillosus ATCC
29799]
Length = 259
Score = 192 bits (487), Expect = 6e-47, Method: Composition-based stats.
Identities = 52/229 (22%), Positives = 89/229 (38%), Gaps = 3/229 (1%)
Query: 23 IGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVI 82
+GGL ++++ LMPE +Y D PYG+ + K + L+ + VI
Sbjct: 1 MGGLTAVRELIHLMPEEDIVYFGDTGRVPYGSRSRDTIIKYARQDVA-FLNTFDLKAVVI 59
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
AC T T + L P PA+ +A A T+SG I ++ T AT+R I
Sbjct: 60 ACGTVSTTALEVLEQENPIPVLGVVRPAVAEAVAATRSGKIGLIGTQATIRTGAYEKYIA 119
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ + + + VE + + + E + D +VL CTHY
Sbjct: 120 KLLPDAQVTARACPLFVPLVENGRF--RPGDKVAEMVAEEYLTPLKEAGVDTLVLGCTHY 177
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
PL+ V V ++ + AR+ +L + + + +
Sbjct: 178 PLLSQVIGNFMGPDVKLINTGAACARQVAAMLKKRDGLNSPDHVGTRRY 226
>gi|293115464|ref|ZP_05791593.2| glutamate racemase [Butyrivibrio crossotus DSM 2876]
gi|292809801|gb|EFF69006.1| glutamate racemase [Butyrivibrio crossotus DSM 2876]
Length = 280
Score = 192 bits (487), Expect = 6e-47, Method: Composition-based stats.
Identities = 64/260 (24%), Positives = 102/260 (39%), Gaps = 6/260 (2%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ + +FDSG+GG+ VL ++ LMP +FIY D PYG + + +
Sbjct: 19 VMEPNTRPVGVFDSGVGGISVLSELVKLMPYENFIYFGDSANAPYGTKPLDKVAELTIHT 78
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+L VIACNTA +R+ +P++ +G PA+K AA I +L+
Sbjct: 79 AD-MLIAKGCKCLVIACNTATVAAVSRIRNMYPAIPVIGIEPALKPAALDNPGKRILVLA 137
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T TL ++ NL+ Y I + + + VE+ E ++ E
Sbjct: 138 THITLNQSKFLNLMTRYKDLADIFTLEAPGIVEAVEKGLT----DSQEFMDYLKNLLHEY 193
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
D +VL CTHYP + + + D + AR L + V
Sbjct: 194 IDNPVDAVVLGCTHYPFVKRQILEALQYTPAVYDGGNGTARETLHQLTMHSIVSHSVSKG 253
Query: 248 HALFLSGKPDIAMRRLMQGF 267
FL+ + Q F
Sbjct: 254 TIEFLNSDVGE-IELSRQLF 272
>gi|149194034|ref|ZP_01871132.1| glutamate racemase [Caminibacter mediatlanticus TB-2]
gi|149135987|gb|EDM24465.1| glutamate racemase [Caminibacter mediatlanticus TB-2]
Length = 245
Score = 192 bits (487), Expect = 6e-47, Method: Composition-based stats.
Identities = 56/252 (22%), Positives = 106/252 (42%), Gaps = 13/252 (5%)
Query: 17 LIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IFDSG+GGL V +++ + + IY D PYGN + + + + L +
Sbjct: 5 GIFDSGVGGLSVAREILKSKLFDE-IIYFGDTARVPYGNKNESTIIRYSLECLE-FLKNF 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACN+A ++ +ELR IK ++ I ++ T T+ +
Sbjct: 63 NIDFLVVACNSASSVAIEELRKEVSFPVVGVIEAGIKAIENENKNSNILLIGTKRTISSS 122
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
N + S + +I +++ +L VEE KI +D E F + ++ D+I
Sbjct: 123 KYQNALISLGFK-NIISIATPLLVPLVEEGIVEGKIVDDI----FEMYFRNLDKEKIDII 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYP + F++ P + + +I + LL + + + ++ S
Sbjct: 178 ILGCTHYPFLEKSFKKHFP-NAKLIHSGQAIVK----LLKKEYNLKPKQISKIEIYASDN 232
Query: 256 PDIAMRRLMQGF 267
+ + +
Sbjct: 233 VEEVRKIAKKWL 244
>gi|85708359|ref|ZP_01039425.1| glutamate racemase [Erythrobacter sp. NAP1]
gi|85689893|gb|EAQ29896.1| glutamate racemase [Erythrobacter sp. NAP1]
Length = 264
Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats.
Identities = 79/262 (30%), Positives = 119/262 (45%), Gaps = 6/262 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ IL+FDSG+GGL V +R L+P+ IY AD G PYG + + R+ L
Sbjct: 1 MNPSSPILLFDSGVGGLTVHAAVRKLLPDAPIIYAADLAGLPYGTKSEAEIAARVAGLLG 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ ++YQP L IACNTA T+ +R + +G VPAIK A+A T++G I +L T
Sbjct: 61 RMSERYQPRLVCIACNTASTIALGMVRDVL-EVPIVGTVPAIKPASAITKTGTIGLLGTQ 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+R+ Y NL + + + + L E G ++ I+ + G
Sbjct: 120 ATVRQAYVDNLEAEFAADKRLLRHGASGLVRAAEAKLRGEEVDRSVIQSAVATLRAMDGG 179
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+ D +VLACTH+PL+ V ++D +D IARR L
Sbjct: 180 DQIDTVVLACTHFPLLTEELGAEFGDGVSFVDGADGIARRIAHLTKGQAFDPAAPSFAV- 238
Query: 250 LFLSGKPDIAMRRL--MQGFGL 269
+G R + +G
Sbjct: 239 --STGDLAQFERLSQTLHNYGF 258
>gi|58040425|ref|YP_192389.1| glutamate racemase [Gluconobacter oxydans 621H]
gi|58002839|gb|AAW61733.1| Glutamate racemase [Gluconobacter oxydans 621H]
Length = 281
Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats.
Identities = 84/260 (32%), Positives = 125/260 (48%), Gaps = 5/260 (1%)
Query: 15 SIL---IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +FDSGIGG+ V+Q +R L+P H Y+AD FPYG D L R++ L
Sbjct: 8 PVGRSLVFDSGIGGMGVVQALRDLLPALHIDYLADTALFPYGEQPDDLLTSRIVSLLVAA 67
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
++ QP + VIACNTA T+ LR ++ +G VP I+ A ++S +I +LST AT
Sbjct: 68 CERLQPDVLVIACNTASTIALPALRQRL-NIPVVGCVPPIRWAGRVSESRVIGLLSTSAT 126
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
RR Y L + C + + LA E G I + +++ E+ F + G
Sbjct: 127 ARRPYILQLHRDFAPDCRLITHGARRLADLAERAFLGEPIADSDVQYELTCLFSQPHGGE 186
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D + L CTHY ++ F +LSP + WLD + ++AR+ R +L L
Sbjct: 187 IDTVGLGCTHYTFLMDAFERLSPPGITWLDPAPAVARQVRTVLQDAPCSSAPSRPGRLLM 246
Query: 252 LSGKPDIA-MRRLMQGFGLK 270
DIA + Q G
Sbjct: 247 TCAPQDIARLETAAQRLGFS 266
>gi|119472793|ref|ZP_01614730.1| glutamate racemase [Alteromonadales bacterium TW-7]
gi|119444752|gb|EAW26057.1| glutamate racemase [Alteromonadales bacterium TW-7]
Length = 261
Score = 191 bits (486), Expect = 8e-47, Method: Composition-based stats.
Identities = 77/242 (31%), Positives = 118/242 (48%), Gaps = 8/242 (3%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI-LDKYQ 76
+FDSGIGG VL ++ +P + Y D+ PYG + RL L I L+K
Sbjct: 2 VFDSGIGGTTVLDHIKQRIPNAQYSYFMDNAFLPYGAQTQQTIINRLCSLIHFIKLNKLN 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L VIACNTA T +R + +G VPAIK AA T+S I++L+TPAT+ +Y
Sbjct: 62 VDLIVIACNTASTSALSAVRK-ITDIPIVGVVPAIKPAAELTRSNHIALLATPATIASSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T+ LI + S ++L SS+ L + E + +++ +EG IE K+TDV+V
Sbjct: 121 TNKLIAQHASNVTVNLYSSVELVNLAELLFFNGYLDTNKLHAVLEGLNIE---KQTDVLV 177
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD---DHALFLS 253
L CTH+P++ + + +D+ +IA R LL + + +
Sbjct: 178 LGCTHFPILTKQISEHFKNSIQLVDSGAAIANRVIYLLTESGLLAQNIPGIKKPLQYYAT 237
Query: 254 GK 255
Sbjct: 238 AN 239
>gi|167626313|ref|YP_001676813.1| glutamate racemase [Francisella philomiragia subsp. philomiragia
ATCC 25017]
gi|241668746|ref|ZP_04756324.1| glutamate racemase [Francisella philomiragia subsp. philomiragia
ATCC 25015]
gi|254877277|ref|ZP_05249987.1| glutamate racemase [Francisella philomiragia subsp. philomiragia
ATCC 25015]
gi|167596314|gb|ABZ86312.1| Glutamate racemase [Francisella philomiragia subsp. philomiragia
ATCC 25017]
gi|254843298|gb|EET21712.1| glutamate racemase [Francisella philomiragia subsp. philomiragia
ATCC 25015]
Length = 265
Score = 191 bits (486), Expect = 8e-47, Method: Composition-based stats.
Identities = 51/263 (19%), Positives = 100/263 (38%), Gaps = 18/263 (6%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I +FDSGIGGL V++ + ++P IY D PYG ++K
Sbjct: 1 MLNNRPIGVFDSGIGGLTVVKNLMNILPNEDIIYFGDIARIPYGTKSRATIQKFAAQTA- 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L + +IACNT + KD ++ ++ + + A ++ + +++TP
Sbjct: 60 KFLIDQEVKAIIIACNTISAIAKDIVQEIAKTVPVIDVISAGVSLVDSLKT--VGVIATP 117
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+ + IH ++ S + S +E I+ + ++ +
Sbjct: 118 ATINSNAYALQIHKNNPSTEVYSSSCGLFVSMIE----EGFIEGEVVELVAKQYLEYFND 173
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR-----INTHQTRV 244
K ++L CTHYP+I + V +D S +A +L + ++
Sbjct: 174 KNIQALILGCTHYPIIKDSIAKAL--DVKLIDPSL----QASKMLQQLLVENNLLNKNNS 227
Query: 245 FDDHALFLSGKPDIAMRRLMQGF 267
++ +++ P
Sbjct: 228 NPEYKFYVTDIPLKFRSVGEMFL 250
>gi|294340641|emb|CAZ89033.1| putative Glutamate racemase [Thiomonas sp. 3As]
Length = 263
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 63/250 (25%), Positives = 112/250 (44%), Gaps = 9/250 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ +FDSG+GGL VL+ +R +P+ IYVAD PYG+ D L++R + ++
Sbjct: 5 PKLGVFDSGVGGLTVLRALRAQLPQVSLIYVADSAHAPYGDRPDDFLQQRARQITRFLIG 64
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ ++ V I + F+G P IK A A + + + +L+TP+TLR
Sbjct: 65 QGARLIVVACNTATAAAITALRAEF--DLPFVGIEPGIKPALARSDARRVGVLATPSTLR 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
L+H++ + L LA VE ++ ++++ I D
Sbjct: 123 SAKFRALLHTHAAAAEPVLQPCPGLADAVER----GDLQAPQVQQLIRQFCAPLRTAGCD 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTHYPL+ + V LD ++ +AR+A L + + + + ++ +
Sbjct: 179 TVVLGCTHYPLLAEQIQAELGPQVHLLDTAEPVARQAARLWQQTSAQRPELP---QIYTN 235
Query: 254 GKPDIAMRRL 263
G + R
Sbjct: 236 GDLAVLRRMA 245
>gi|92113464|ref|YP_573392.1| glutamate racemase [Chromohalobacter salexigens DSM 3043]
gi|91796554|gb|ABE58693.1| glutamate racemase [Chromohalobacter salexigens DSM 3043]
Length = 267
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 78/260 (30%), Positives = 123/260 (47%), Gaps = 7/260 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ ILIFDSG+GGL V+ +R +P YV D+ PYG D L R++
Sbjct: 1 MTAPILIFDSGVGGLSVVGALRARLPGAALAYVCDNAALPYGTKPDAWLVARIVAACRAA 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ V+ACNTA TL LR + ++ +G VPAIK AA +SG+ +L+T AT
Sbjct: 61 VAASGACALVVACNTASTLALQALRESL-TVPVIGTVPAIKPAAQLLRSGVFGLLATSAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ R YT LI + + C + +++ L ++ E G E I + + E
Sbjct: 120 VSRPYTQRLIGEFATHCTVIRLAADPLVAQAERVLAGRAPDEAVIAASLAPLW---EAPD 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D +VL CTH+PL+ +P V W+D+ D+IARR ++ + + +
Sbjct: 177 LDTVVLGCTHFPLLRETLAAQAPRDVRWIDSGDAIARRVAQVVTPAPCNMPGAGES---W 233
Query: 252 LSGKPDIAMRRLMQGFGLKS 271
S + R + +G +
Sbjct: 234 ASAPHRPGLARALAEYGFSA 253
>gi|332535187|ref|ZP_08410994.1| glutamate racemase [Pseudoalteromonas haloplanktis ANT/505]
gi|332035406|gb|EGI71906.1| glutamate racemase [Pseudoalteromonas haloplanktis ANT/505]
Length = 266
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 78/260 (30%), Positives = 122/260 (46%), Gaps = 10/260 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I++FDSGIGG VL+ ++ +P + Y D+ PYG + RL L I
Sbjct: 1 MSAHIMVFDSGIGGTTVLEHIKQSIPNAQYSYFMDNALLPYGAQSQQTIINRLCSLIHFI 60
Query: 72 -LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+ L VIACNTA T +R + +G VPAIK AA T+S I +L+TPA
Sbjct: 61 KANTLNVDLIVIACNTASTSALSAVRQ-ITDIPIVGVVPAIKPAAELTRSNHIGLLATPA 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ +YT LI + ++L SS+ L + EE + +++ + ++ K
Sbjct: 120 TVASSYTKTLIAEHARNVIVNLYSSVELVTLAEECFFTGSLDTNKLYQVLDEL---HIDK 176
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT---HQTRVFDD 247
DV+VL CTH+P++ Q V LD+ +IA R LL ++N QT +
Sbjct: 177 TIDVLVLGCTHFPILAGPISQYFEGNVKLLDSGVAIANRVNFLLNQLNLCADKQTDIKKP 236
Query: 248 HALFLSGKPDIAMRRLMQGF 267
+ + + +L
Sbjct: 237 LQYYATAD--VFSNKLAVKL 254
>gi|224543164|ref|ZP_03683703.1| hypothetical protein CATMIT_02364 [Catenibacterium mitsuokai DSM
15897]
gi|224523951|gb|EEF93056.1| hypothetical protein CATMIT_02364 [Catenibacterium mitsuokai DSM
15897]
Length = 264
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 63/257 (24%), Positives = 107/257 (41%), Gaps = 6/257 (2%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
MK K + I +FDSG+GG+ VLQ + +MP + + D + PYG +
Sbjct: 1 MKKRKGVISMKKEEYIGVFDSGVGGVSVLQAIHEMMPGENLYFFGDSLNAPYGEKTLEDV 60
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
++ + ++ K VIACNTA + LR + + +G PA+K AA ++
Sbjct: 61 QQLTLNAIENMNKKKHLKAIVIACNTATSAAVTLLREKYTDIPVIGIEPALKPAALSKKN 120
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
I +++T TLR L Y I V LA R+E+ + E ++ + +
Sbjct: 121 SCILVMATANTLRLDKFHQLAERYDKSATIIPVPCYGLAKRIEQ----GNLDEPDLIELL 176
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+GK D +VL CTHYP + + + D + ++ L +
Sbjct: 177 TDLIGPYKGK-VDSVVLGCTHYPFVKDQIATVLGD-IPMFDGAYGTSKHLYNCLKECDCL 234
Query: 241 QTRVFDDHALFLSGKPD 257
+ D S + +
Sbjct: 235 NDQKEGDILYGSSKEDE 251
>gi|226324711|ref|ZP_03800229.1| hypothetical protein COPCOM_02497 [Coprococcus comes ATCC 27758]
gi|225207159|gb|EEG89513.1| hypothetical protein COPCOM_02497 [Coprococcus comes ATCC 27758]
Length = 260
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 68/244 (27%), Positives = 109/244 (44%), Gaps = 10/244 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I I+DSGIGGL VL + MPE FIY AD PYG +K + + + L
Sbjct: 2 KIGIYDSGIGGLSVLHRALKKMPEAEFIYYADTKHVPYGEKTREQIKGYVEEVLN-FLIA 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--STPATL 132
+ VIACNTA ++ E R F ++ +G PA+K+A Q IL +TP T+
Sbjct: 61 KEVDAIVIACNTATSVATKEFRGEF-AVPIVGMEPAVKRALKLYQDMQKRILVTATPVTI 119
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+L+ ++ + L L E + ++ E+ K ++ +
Sbjct: 120 AGEKLHSLLEKVDTEHEVDLAPLPKLVRFAE----AGRFQDPEVDKYLKNSLQSYTLNQY 175
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
+VL CTH+ FR++ P + ++D ++ R+ R +LP T +
Sbjct: 176 AAVVLGCTHFNYFKQSFRKIFPGEIHFVDGNEGTLRQLRRVLPEQTT--PGEPSKVTYYF 233
Query: 253 SGKP 256
SG+P
Sbjct: 234 SGEP 237
>gi|126695981|ref|YP_001090867.1| putative aspartate and glutamate racemases:glutamate racemase
[Prochlorococcus marinus str. MIT 9301]
gi|126543024|gb|ABO17266.1| Putative aspartate and glutamate racemases:Glutamate racemase
[Prochlorococcus marinus str. MIT 9301]
Length = 264
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 53/261 (20%), Positives = 107/261 (40%), Gaps = 11/261 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ + IFDSGIGG +L + + + Y+AD P+GN + ++ + +
Sbjct: 1 MKIKVGIFDSGIGGFTILNSLLKIRKDVEVFYLADTKRIPFGNKDSKEIRLIAKEICTFF 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+DK ++ACNT D L F I + + +I +L+T T
Sbjct: 61 VDK-NLDALLVACNTTNACALDILEDNLKIPCF----DLINSVSELVEKQIIGVLATSTT 115
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R +Y I++ I S +E+ K+ D++ + K
Sbjct: 116 VRSSYYEKAINTKKENTIILQQECPKFVSEIEK----EKLNLDKLNSLSDLYLRPLINKN 171
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA--RCLLPRINTHQTRVFDDHA 249
+ ++L C+HYPLI + R+ + +D S + ++ +P ++ F++
Sbjct: 172 IEELILGCSHYPLIYDILRKKLGPNIKIIDPSIGLIKKFNESFAIPETERCESISFENVK 231
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
F++ + D ++ G+
Sbjct: 232 FFVTSERDNFSNKVKFWLGIN 252
>gi|33240493|ref|NP_875435.1| glutamate racemase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|33238021|gb|AAQ00088.1| Glutamate racemase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 267
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 56/261 (21%), Positives = 107/261 (40%), Gaps = 11/261 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ + IFDSGIGG VL+ ++ + IY+AD P+G + +++ + + S
Sbjct: 1 MKLRLGIFDSGIGGFTVLKSIQERHSSFRSIYLADTQRVPFGTKQPSEIRQIALEI-SKW 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + V+ACNT ++ D +++ I + I IL+TP+T
Sbjct: 60 LCRQNINAVVVACNTTNSVALDVVKNNVEVP----VFDLIGSTSELIHESRIGILATPST 115
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ S I S + +E +I E++ I +
Sbjct: 116 VASKAYSKEILSSKPFSFVLEEGCPEFVPMIER----GQINSSEVRGAIVNHLEPLIKEN 171
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT--RVFDDHA 249
+ IVL C+H+PL+ +F++L P + +D S ++A++ L+ R D
Sbjct: 172 VEAIVLGCSHFPLLKPIFKELMPSNIRLIDPSLNLAKKLDTLITPSVNEVDLARKPIDIH 231
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
++ P + G++
Sbjct: 232 FCVTSDPSQFSDKASHWLGIR 252
>gi|253573395|ref|ZP_04850738.1| glutamate racemase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251846923|gb|EES74928.1| glutamate racemase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 260
Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 61/254 (24%), Positives = 107/254 (42%), Gaps = 8/254 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSGIGGL VL + +P F+Y AD + PYG +K+ + S ++ +
Sbjct: 3 IAFFDSGIGGLTVLTEAMRKLPNEDFLYFADTLHVPYGTKTLPEVKRYVEESVS-LIMQG 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--STPATLR 133
V+ACNTA + +ELR T+ + +G PA+K A +Q+ +L +T TL
Sbjct: 62 DIKALVVACNTATSAAIEELRRTY-DIPIVGMEPAVKPAVKRSQAAGKRVLVFATSLTLS 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ ++L+ + + L E+ + DEI++ + +
Sbjct: 121 LSKYTDLVARVDDHKVVDSMPLPELVQYCEQL----QFDRDEIERYFSRKLAGIDLSQYS 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
IVL CTH+P + +Q+ P ++ +D S R L+ S
Sbjct: 177 TIVLGCTHFPYYKSILQQILPPHIELIDGSHGTVERLCSLIGSSANPGQAFKGHIEFKCS 236
Query: 254 GKPDIAMRRLMQGF 267
+ + ++ +
Sbjct: 237 DENPAYLDKMARAL 250
>gi|78779002|ref|YP_397114.1| glutamate racemase [Prochlorococcus marinus str. MIT 9312]
gi|78712501|gb|ABB49678.1| glutamate racemase [Prochlorococcus marinus str. MIT 9312]
Length = 264
Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 53/261 (20%), Positives = 107/261 (40%), Gaps = 11/261 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I IFDSGIGG +L + + Y+AD P+G+ ++ + +
Sbjct: 1 MKLKIGIFDSGIGGFTILNSLLKTRNDVEVFYLADTKRIPFGDKNFEEIRLIAKEICNFF 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ +IACNT D L + + ++ + +I IL+T T
Sbjct: 61 -EDKNLDALLIACNTTNACALDIL-ENDLKIPCFDLINSVSEIV---NKQIIGILATKTT 115
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R +Y N I S I S +E K+ ++ + K
Sbjct: 116 VRSSYYKNAISSKKENSKIFQNECPEFVSEIER----EKLDFIKLNNLSDLYLKPLLNKN 171
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA--RCLLPRINTHQTRVFDDHA 249
+ I+L C+HYPLI R+ + +D S+++ ++ +P+ + +++ F++
Sbjct: 172 IEEIILGCSHYPLIYEFLRKKISSNIKIIDPSEALIKKFNESFAIPKTDRYESLSFENVK 231
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
F++ + D +++ G+
Sbjct: 232 FFVTSERDKFSKKVKFWLGIN 252
>gi|315648405|ref|ZP_07901504.1| glutamate racemase [Paenibacillus vortex V453]
gi|315276099|gb|EFU39445.1| glutamate racemase [Paenibacillus vortex V453]
Length = 267
Score = 189 bits (479), Expect = 5e-46, Method: Composition-based stats.
Identities = 63/256 (24%), Positives = 103/256 (40%), Gaps = 8/256 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I FDSG+GGL VL +P+ F++ AD + PYG +K + + +
Sbjct: 3 IAFFDSGLGGLTVLSAAMRELPQEDFLFFADTLHVPYGTKAKEDVKSYIHDAI-KTIMQE 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--STPATLR 133
+ VIACNTA ++ ELR T+P + +G PA+K A +S IL +TP TLR
Sbjct: 62 EVKAIVIACNTATSMAISELRRTYP-IPIIGMEPAVKPAVEINRSSGKRILVFATPLTLR 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ +L+ S + + L E + + + +
Sbjct: 121 ESKYRDLVRRVDSMHIVDSLPLPELVEYCE----ALNFDQKIMNAYFTEKLDGFDLNEYG 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTHYP + L P + +D S R +L + + D L S
Sbjct: 177 TVVLGCTHYPFYKKILSDLLPEHIQIIDGSTGTVNRLIQVLRANDLLSSSGTQDVRLLNS 236
Query: 254 GKPDIAMRRLMQGFGL 269
+ ++ + +
Sbjct: 237 SQSMEYAEKMEKALSI 252
>gi|239618385|ref|YP_002941707.1| glutamate racemase [Kosmotoga olearia TBF 19.5.1]
gi|239507216|gb|ACR80703.1| glutamate racemase [Kosmotoga olearia TBF 19.5.1]
Length = 277
Score = 189 bits (479), Expect = 5e-46, Method: Composition-based stats.
Identities = 55/259 (21%), Positives = 106/259 (40%), Gaps = 13/259 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMP-EYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSGIGG+ VL+++ +P F Y D PYG+ +KK + +F
Sbjct: 7 IGIFDSGIGGITVLRELMKSVPTGVRFHYFGDTARVPYGSKPPSEIKKYVHQVFDFFRSL 66
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPATL 132
V ACNT+ +++ E + + + F + + +A + ++I+ T T+
Sbjct: 67 -SVEAIVTACNTSDSILSKEEKKSL-EVPFFSIIDPVTEALKNDLPINSSVAIIGTRNTI 124
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+R+ + + C I + + VEE + E ++ +
Sbjct: 125 KRSLYLKKLIGSDNICRISQKACPLFVPLVEEGVWEGTLAETIVRY----YLRGIKRFAP 180
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTHYP ++ + V +D ++ +AR + + Q V ++
Sbjct: 181 DYLILGCTHYPFLLKPIKTYLGEDVKVVDPAEYVAREFKAWIENQ---QNDVDSTVVFYV 237
Query: 253 SGKPDIAMRRLMQGFGLKS 271
+G+ L + G +
Sbjct: 238 TGEVVSFTESL-KMMGFDN 255
>gi|91070263|gb|ABE11182.1| putative aspartate and glutamate racemases:glutamate racemase
[uncultured Prochlorococcus marinus clone HF10-11H7]
Length = 264
Score = 189 bits (479), Expect = 5e-46, Method: Composition-based stats.
Identities = 53/261 (20%), Positives = 104/261 (39%), Gaps = 11/261 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I IFDSGIGG +L + + Y+AD P+GN ++ + +
Sbjct: 1 MKLKIGIFDSGIGGFTILNSLLKTRQDVEVFYLADTKRIPFGNKNSKEIRLIAKEICTFF 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+DK ++ACNT D L F I + +I +L+T T
Sbjct: 61 VDK-NLDALLVACNTTNACALDILEDNLKVPCF----DLINSVSEIVDKRIIGVLATQTT 115
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R +Y I++ I S +E+ K+ D++ + K
Sbjct: 116 VRSSYYKKAINAKKESTIIFQQECPKFVSEIEK----EKLNLDKLNTLSDLYLRPLIIKN 171
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA--RCLLPRINTHQTRVFDDHA 249
+ ++L C+HYPLI R+ + +D S ++ ++ +P +++ ++
Sbjct: 172 IEELILGCSHYPLIYDFLRKKLDSNIKIIDPSVALIKKFNESFAIPENYRYESISLENVK 231
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
F++ + D ++ G+
Sbjct: 232 FFVTSERDEFFNKVKFWLGIN 252
>gi|94497599|ref|ZP_01304168.1| Glutamate racemase [Sphingomonas sp. SKA58]
gi|94423016|gb|EAT08048.1| Glutamate racemase [Sphingomonas sp. SKA58]
Length = 279
Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats.
Identities = 79/258 (30%), Positives = 126/258 (48%), Gaps = 3/258 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
IL FDSG+GGL +L +R ++P +Y AD GFPYG + + R+ L ++
Sbjct: 18 DAPILFFDSGVGGLSILAPVRDMLPTASIVYAADSAGFPYGTKSEAEIAARVPALLGRLV 77
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++Y+P L+VIACNTA T+ +R+ + +G VPAIK AA +++ + +L T AT+
Sbjct: 78 ERYRPRLAVIACNTASTIALQHVRAAL-DIPVVGTVPAIKPAALLSKNRIFGVLGTDATV 136
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R+ Y L + + C + S L E G + + + G + G+R
Sbjct: 137 RQPYVDRLAAEHGADCIVLRHGSAALVQLAEAKLRGEPLDPRVARAALAGLTTQPGGQRM 196
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D++VLACTH+PL+ +P + ++ D IARR L T A+F
Sbjct: 197 DMVVLACTHFPLVEAELAAAAPHSLGFVHGGDGIARRIAF-LTEGQTWPAEPTPGTAVFT 255
Query: 253 S-GKPDIAMRRLMQGFGL 269
+R + +GL
Sbjct: 256 RLDAQQERLRPALARYGL 273
>gi|261749317|ref|YP_003257002.1| glutamate racemase [Blattabacterium sp. (Periplaneta americana)
str. BPLAN]
gi|261497409|gb|ACX83859.1| glutamate racemase [Blattabacterium sp. (Periplaneta americana)
str. BPLAN]
Length = 271
Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats.
Identities = 61/259 (23%), Positives = 106/259 (40%), Gaps = 11/259 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I IFDSGIGGL++ ++++ MP IY D PYGN ++ M + S L
Sbjct: 7 SPIGIFDSGIGGLLIAKEIKNYMPNECIIYFGDTKNMPYGNKSKEFIRNHSMKIAS-FLY 65
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACN+ + D ++ F + + I + S I I++TPAT+
Sbjct: 66 EKKCKAIVIACNSIVSNALDVIQKNFLKKILIFNVIEPIVKNKVLISSKRIGIMATPATI 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R + I Y I +S+ +LA+ +E KI ++ + +
Sbjct: 126 RSNFYQKNIKRYCPHLDIVQISTPLLATIIENGFEKKKIN------YLKNYLNHFKSIKI 179
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT--HQTRVFDDHAL 250
D ++LACTHY + V +D + + + L N + ++
Sbjct: 180 DTLLLACTHYLFLKKEIDNFFHGKVRLIDIQKIVVQEIQKKLYENNLLCLHSTWNNNPIF 239
Query: 251 FLSGKPDIAMR-RLMQGFG 268
+ S ++ FG
Sbjct: 240 YTSSSISPFFNEKIKILFG 258
>gi|293376564|ref|ZP_06622792.1| glutamate racemase [Turicibacter sanguinis PC909]
gi|325839373|ref|ZP_08166812.1| glutamate racemase [Turicibacter sp. HGF1]
gi|292644790|gb|EFF62872.1| glutamate racemase [Turicibacter sanguinis PC909]
gi|325490493|gb|EGC92809.1| glutamate racemase [Turicibacter sp. HGF1]
Length = 257
Score = 188 bits (478), Expect = 7e-46, Method: Composition-based stats.
Identities = 58/242 (23%), Positives = 103/242 (42%), Gaps = 9/242 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I FDSGIGGL VL + +P + ++Y AD + PYG ++ + L +
Sbjct: 2 KIGFFDSGIGGLTVLSEALKRLPHHDYLYYADTLHAPYGPKPKEEVRGYIFEAIE-FLVR 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--STPATL 132
+ VIACNTA ++ ++LR + + +G PA+K A + Q +L +TP TL
Sbjct: 61 KGADIIVIACNTATSIAVNDLREKY-QIPIIGMEPAVKPAIEWVQESGKRVLVTATPLTL 119
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ +LI L+ L E + + + ++ ++ +
Sbjct: 120 KEEKLHHLIERLDQSHVTDLLPLPDLVRFAESF----DFSPETVVPYLKKQLVDYQISDY 175
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
IVL CTH+PL F+++ ++ +D S ++ + +T +
Sbjct: 176 GAIVLGCTHFPLFASSFKEVFEPGIELIDGSVGTVTHLANIIDTMK-GETSKTPTVTFYQ 234
Query: 253 SG 254
SG
Sbjct: 235 SG 236
>gi|297205618|ref|ZP_06923014.1| glutamate racemase [Lactobacillus jensenii JV-V16]
gi|297150196|gb|EFH30493.1| glutamate racemase [Lactobacillus jensenii JV-V16]
Length = 265
Score = 188 bits (477), Expect = 8e-46, Method: Composition-based stats.
Identities = 44/241 (18%), Positives = 87/241 (36%), Gaps = 7/241 (2%)
Query: 27 IVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNT 86
VL+K+ +P +++ D PYG+ + + L + + ACNT
Sbjct: 17 TVLKKVMKKLPNEATVFIGDQAHMPYGDKTTEEVIELTRKSVD-FLLSKNVKVIIFACNT 75
Query: 87 AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVS 146
A + ++ AA T++ ++++ T T+ S I
Sbjct: 76 ATAAAMEVIQKEIAPKIIGVIQSGSLAAAKITKNNKVAVIGTHVTIESHAYSKEIKFRNP 135
Query: 147 QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIV 206
+ +++ LA VE D ++ ++ +GK D +VL CTHYP+I
Sbjct: 136 DIKVTELATPKLAPLVE-AQRDFAYNVDVVRDSLDS----LKGKDFDTMVLGCTHYPIIE 190
Query: 207 HVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQG 266
++ + +D +D +A+ +L R H + +G +
Sbjct: 191 KEISEIVGSTIKLVDPADQVAQYTENILKRDGMLA-GEKGKHEYYTTGDCKKFTEIARKW 249
Query: 267 F 267
Sbjct: 250 L 250
>gi|307298986|ref|ZP_07578788.1| glutamate racemase [Thermotogales bacterium mesG1.Ag.4.2]
gi|306915411|gb|EFN45796.1| glutamate racemase [Thermotogales bacterium mesG1.Ag.4.2]
Length = 273
Score = 188 bits (477), Expect = 9e-46, Method: Composition-based stats.
Identities = 57/265 (21%), Positives = 109/265 (41%), Gaps = 12/265 (4%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPE-YHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ + I +FDSGIGGL VL+++ +PE F Y AD PYG+ L++ + +F
Sbjct: 1 MRSRLRIGVFDSGIGGLTVLKRLVETLPEGVSFHYFADTARVPYGSKPVETLRRYVREIF 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISILS 127
+ V ACNT+ +++ ++ F P +++ + ++I++
Sbjct: 61 D-LFAHLNVDAIVTACNTSDSILTQSDKAELGVPYFSIIDPTVRRIGESAPGNSTVAIIA 119
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++++ + Y S I + + +EE +I + +K +
Sbjct: 120 TENTVKKSLYLRKLFRYESFSKIVQKACPLFVPLIEEGIWEGEIVDSIVKY----YLNDF 175
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
D ++L CTHYP I + + P +D S+ I R + +
Sbjct: 176 AEIEPDFMILGCTHYPFIKNSIERFLPSKTKVVDPSEYIVRDVADWATIL----SPEPST 231
Query: 248 HALFLSGKPDIAMRRLMQGFG-LKS 271
++SG I L + G ++
Sbjct: 232 VDYYVSGNTRIFQDILKRYLGRFEN 256
>gi|317404652|gb|EFV85049.1| glutamate racemase [Achromobacter xylosoxidans C54]
Length = 236
Score = 188 bits (477), Expect = 9e-46, Method: Composition-based stats.
Identities = 58/236 (24%), Positives = 99/236 (41%), Gaps = 5/236 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ I ++DSG+GGL VL+ +R +P H +YVAD PYG +++R + +
Sbjct: 1 MPAPHPIGVYDSGVGGLSVLRAIREALPHEHLLYVADSAHVPYGEKTQQYVQQRALAIAD 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
++ + + V LR+ P +A +G PAIK AA T+SG++ + +T
Sbjct: 61 YLVSRRANAMVVACNTAT-AAAIAALRARHPDLAIIGVEPAIKPAAHLTRSGVVGVFATT 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
TL + L+ + I +VE I+ + + + E
Sbjct: 120 GTLASPKFAALVQREAPEIRILFRPCPEWVLQVERGE----IQGEAAARVVAAPVHELLA 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+ D +VL CTH+P + + + V L+ +ARR R L
Sbjct: 176 QGADALVLGCTHFPFLHDAIQAAAGPAVPLLETGGPVARRLRHQLQERGLLAGAGP 231
>gi|306820477|ref|ZP_07454113.1| glutamate racemase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304551552|gb|EFM39507.1| glutamate racemase [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 271
Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 62/257 (24%), Positives = 99/257 (38%), Gaps = 12/257 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+G VL K+ +MP ++IY D PYG L+K + L
Sbjct: 3 NRPIGIFDSGVGAFSVLNKLVEVMPNENYIYFGDSGHNPYGQKTAEELQKLCSCIVD-FL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ + VIACNTA D L+ + P K+A T++ I + ST T
Sbjct: 62 TRKEVKAIVIACNTATVAALDYLQERYYLPIIGVINPGAKEALRLTKNNKIGVCSTVFTA 121
Query: 133 RRTYTSNLIHSYVSQC---HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
+ N I+ + ++ S+ LA+ +E E IK+ +
Sbjct: 122 KTHGYLNDINKVSNNDKSLKVYEEGSVNLANIIENGFEYNDENEAIIKELVGRF-----T 176
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DH 248
D ++L CTHYPL+ +F + + +D A AR +L N +
Sbjct: 177 DNIDTLILGCTHYPLVEDLFAKYFKGNI--VDPGMQTAIEARNILKAKNMLTDSSDNYKV 234
Query: 249 ALFLSGKPDIAMRRLMQ 265
+++
Sbjct: 235 QYYVTKDVQNFKNVAKN 251
>gi|256852216|ref|ZP_05557602.1| glutamate racemase [Lactobacillus jensenii 27-2-CHN]
gi|260661752|ref|ZP_05862663.1| glutamate racemase [Lactobacillus jensenii 115-3-CHN]
gi|282932656|ref|ZP_06338070.1| glutamate racemase [Lactobacillus jensenii 208-1]
gi|256615262|gb|EEU20453.1| glutamate racemase [Lactobacillus jensenii 27-2-CHN]
gi|260547499|gb|EEX23478.1| glutamate racemase [Lactobacillus jensenii 115-3-CHN]
gi|281303230|gb|EFA95418.1| glutamate racemase [Lactobacillus jensenii 208-1]
Length = 265
Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 44/241 (18%), Positives = 87/241 (36%), Gaps = 7/241 (2%)
Query: 27 IVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNT 86
VL+K+ +P +++ D PYG+ + + L + + ACNT
Sbjct: 17 TVLKKVMKKLPNEATVFIGDQAHMPYGDKTTEEVIELTRKSVD-FLLSKNVKVIIFACNT 75
Query: 87 AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVS 146
A + ++ AA T++ ++++ T T+ S I
Sbjct: 76 ATAAAMEVIQKEIAPQIIGVIQSGSLAAAKITKNNKVAVIGTHVTIESHAYSKEIKFRNP 135
Query: 147 QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIV 206
+ +++ LA VE D ++ ++ +GK D +VL CTHYP+I
Sbjct: 136 DIKVTELATPKLAPLVE-AQRDFAYNVDVVRDSLDS----LKGKDFDTMVLGCTHYPIIE 190
Query: 207 HVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQG 266
++ + +D +D +A+ +L R H + +G +
Sbjct: 191 KEISEIVGSTIKLVDPADQVAQYTENILKRDGMLA-GEKGKHEYYTTGDCKKFTEIARKW 249
Query: 267 F 267
Sbjct: 250 L 250
>gi|295691544|ref|YP_003595237.1| glutamate racemase [Caulobacter segnis ATCC 21756]
gi|295433447|gb|ADG12619.1| glutamate racemase [Caulobacter segnis ATCC 21756]
Length = 282
Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 58/276 (21%), Positives = 96/276 (34%), Gaps = 26/276 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V + + +P+ F Y+AD PYG + L
Sbjct: 2 IGVFDSGVGGLTVHRALVQRLPQADFTYLADQANAPYGVRTGEDIVALTKAGCE-HLFDR 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTF----------PSMAFLGAVPAIKQAA---------- 115
+ V+ACNTA + L+ T+ P VP I++A
Sbjct: 61 GASVVVLACNTASAIALRRLQQTWLPSYRKELGRPVNILGIIVPTIEKATGLPWEHEAER 120
Query: 116 ---AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172
Q ++ + +T AT+R I + + L +E A + +
Sbjct: 121 RGEKVEQLDILGVFATQATVRSRVYEIEIDKRKQDLAVFSEACPELVPLIEGDASAVDLA 180
Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232
+ + G+ D +VL CTHY +I +FR P + ++ A
Sbjct: 181 KAVQGHV--EALKTRIGRYPDRVVLGCTHYEIIADIFRAALPAGTPLIQQPEATADALEL 238
Query: 233 LLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268
L R + +G P + +G
Sbjct: 239 YLERHPEYDPGQGGSRVFLTTGTPGPQNGLVQSFWG 274
>gi|113954148|ref|YP_730755.1| glutamate racemase [Synechococcus sp. CC9311]
gi|113881499|gb|ABI46457.1| glutamate racemase [Synechococcus sp. CC9311]
Length = 263
Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 58/255 (22%), Positives = 99/255 (38%), Gaps = 12/255 (4%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+FDSGIGGL VL+++ Y+ D PYG+ ++ + + L Q
Sbjct: 6 GLFDSGIGGLTVLRRILERHGAVPVTYLGDTARVPYGSRSPSEIRSIAAEVVA-WLRAQQ 64
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACNT L R A + V I AAA + + +L+TPAT+
Sbjct: 65 VSTVVMACNTTNAL----ARDVTEGQAGVPVVGLIGAAAALVKESRVGVLATPATVASGA 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
I + + + +E ++ DE+++ D +V
Sbjct: 121 YRESIEALHPGTLVVQQACPDFVPLIE----AGDLRSDELREAAIRYLQPLLEASVDSVV 176
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI---NTHQTRVFDDHALFLS 253
L CTHYPL+V + L P + +D + ++A + L + + +Q + L ++
Sbjct: 177 LGCTHYPLLVPLLANLLPSHMRLIDPAVAVATQLDAFLGQPLPGSQNQPVSLEAAHLCVT 236
Query: 254 GKPDIAMRRLMQGFG 268
R G
Sbjct: 237 KDAQGFAERATAWLG 251
>gi|87124213|ref|ZP_01080062.1| Glutamate racemase [Synechococcus sp. RS9917]
gi|86167785|gb|EAQ69043.1| Glutamate racemase [Synechococcus sp. RS9917]
Length = 262
Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 59/255 (23%), Positives = 99/255 (38%), Gaps = 12/255 (4%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+FDSG+GGL VL+ + +Y+ D PYG+ ++ + + L Q
Sbjct: 6 GLFDSGVGGLTVLRSVLHRHGPVPCVYLGDTARVPYGSRAPSEIRSIAAEVVA-WLRSQQ 64
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
V+ACNT L R A + V I AAA + + +L+TPAT+
Sbjct: 65 VSTVVMACNTTNAL----ARDVAEGQAGVPVVGLIGAAAALVRESRVGVLATPATVASGA 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
I + + + R+E + +++ + ++
Sbjct: 121 YRESIEALHPGSLVVQQACPEFVPRIE----AGDLSSPALRQIAQLYLTPLLEASVQSVI 176
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL--PRINTH-QTRVFDDHALFLS 253
L CTHYPL+ + + L P V +D ++ +AR+ LL PR Q L ++
Sbjct: 177 LGCTHYPLLQPLLQSLLPPDVRLIDPAEGVARQLDALLGTPREGRPDQPLSLATTRLCVT 236
Query: 254 GKPDIAMRRLMQGFG 268
P+ R G
Sbjct: 237 ADPEGFACRATPWLG 251
>gi|227514545|ref|ZP_03944594.1| glutamate racemase [Lactobacillus fermentum ATCC 14931]
gi|227087102|gb|EEI22414.1| glutamate racemase [Lactobacillus fermentum ATCC 14931]
Length = 268
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 48/255 (18%), Positives = 98/255 (38%), Gaps = 5/255 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I + DSG+GGL V++ ++ +P I+V D FPYG + +++ + + L
Sbjct: 3 NRPIGVMDSGLGGLSVVRVIQQKLPNEEVIFVGDQGHFPYGTKDQAEVRQLALSI-GAFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K+ + V+ACNTA L++ P P + A A + G I +++T AT
Sbjct: 62 LKHDVKMMVVACNTATAAALPALQAVLPIPVIGVIEPGARAALAQDKKGPIGVIATTATT 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + ++ + VE G + ++ + + +
Sbjct: 122 TAGAYPATIERLAPGTPVIAKATQPMVEIVEHGQTG----TAKAQEVVSEQLMTFKEHPV 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
+++ CTH+P + + V +D + A+ L + ++ L+
Sbjct: 178 KTLIMGCTHFPFLAPEISKAVGPTVALVDPAKETVATAKSWLEQHQAMGNHAHPNYHLYS 237
Query: 253 SGKPDIAMRRLMQGF 267
+G + +
Sbjct: 238 TGNLPDLRAGVNKWL 252
>gi|157164289|ref|YP_001466834.1| glutamate racemase [Campylobacter concisus 13826]
gi|166231029|sp|A7ZDH6|MURI_CAMC1 RecName: Full=Glutamate racemase
gi|112801263|gb|EAT98607.1| glutamate racemase [Campylobacter concisus 13826]
Length = 262
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 61/242 (25%), Positives = 108/242 (44%), Gaps = 9/242 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL VL + + E+ F+Y AD PYG + K L K
Sbjct: 3 IGIFDSGLGGLSVLNEALSKLSEHEFLYYADVKNVPYGQKSRDEILKFSFDAV-KFLVKN 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG--LISILSTPATLR 133
V+ACNTA ++ ELR+ S+ +G PA+K+A + +++TP T+
Sbjct: 62 GAKAVVVACNTATSVAIKELRANL-SVPIIGMEPAVKKAHDLSHDDALKTLVIATPVTVN 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
LI + ++ L++ L + E+ + + +K ++ ++ + + D
Sbjct: 121 GAKLKELIINLNAKDKTELLALPRLVNFAEKAE----FESENVKSYLKEELVKFDLSKFD 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTH+ R++ P V +D ++ +R L + + + F S
Sbjct: 177 FLVLGCTHFNYFKDSLREILPPNVSIIDGNEGTIKRLISELG-LKISSVNLTPNVKFFYS 235
Query: 254 GK 255
G+
Sbjct: 236 GE 237
>gi|293401254|ref|ZP_06645398.1| glutamate racemase [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291305380|gb|EFE46625.1| glutamate racemase [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 239
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 54/240 (22%), Positives = 96/240 (40%), Gaps = 5/240 (2%)
Query: 29 LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAF 88
L+++R MP+ ++Y D PYG E + +R + + L VIACNTA
Sbjct: 2 LKELRRWMPKERYLYFGDSAFAPYGEKERDIITQRCLHICDK-LVHIGVKAIVIACNTAT 60
Query: 89 TLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQC 148
+ +ELR +P + +G PA+K A + + +++T TL+ +L+ Y Q
Sbjct: 61 SACVEELRKRYPQLPIVGMEPALKPAVEGKEHQQVIVMATHFTLKEKKFEHLMSRYRKQH 120
Query: 149 HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV 208
I+ + + L VE ++K ++ + D IVL CTH+
Sbjct: 121 CIYKLPTPKLVEIVEHDQLE---NTTLVEKTLQDYLAPYDLSHIDSIVLGCTHFVFFKEQ 177
Query: 209 FRQLSPWPVDWLDNSDSIARRARCLLPRIN-THQTRVFDDHALFLSGKPDIAMRRLMQGF 267
R + V +D + +R + LL N + + S + +
Sbjct: 178 IRHIVKDKVTLVDGNAGTSRHVKELLSEKNTLQKESGHAKVTILNSSDDPAYITLSEKLL 237
>gi|302672271|ref|YP_003832231.1| glutamate racemase MurI [Butyrivibrio proteoclasticus B316]
gi|302396744|gb|ADL35649.1| glutamate racemase MurI [Butyrivibrio proteoclasticus B316]
Length = 272
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 60/220 (27%), Positives = 92/220 (41%), Gaps = 6/220 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSGIGGL VL + +P +I+ AD PYG + + + L
Sbjct: 2 KIGIFDSGIGGLSVLHEAYHRLPGQEYIFYADTDHVPYGTKTPEQIVEFAIDNA-QFLID 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA ++ ELRS F + LG PA+K A T I +++TP T+R
Sbjct: 61 KGAEALVVACNTATSVAIKELRSRF-DIPILGMEPAVKPAVEGTDDKRIMVIATPVTIRE 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+L+H + + L++ L E+ + +E+ I G F +
Sbjct: 120 DKLKDLLHRVDEEHRVDLLAMPRLVEFAEK----EQFDTEEVVGYIRGRFANFDPTDYCA 175
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+VL CTH+ V +D + +L
Sbjct: 176 LVLGCTHFNYFKPVLEDFFGKDTLLVDGNYGTVHHLADVL 215
>gi|254431905|ref|ZP_05045608.1| glutamate racemase [Cyanobium sp. PCC 7001]
gi|197626358|gb|EDY38917.1| glutamate racemase [Cyanobium sp. PCC 7001]
Length = 274
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 60/261 (22%), Positives = 99/261 (37%), Gaps = 18/261 (6%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+FDSG+GGL VL+K+ L P +Y+ D PYG ++ + +
Sbjct: 6 GLFDSGLGGLTVLRKVNQLYPHSPCLYLGDTARVPYGTRSPDEIRAIAAEVVRWLRW-QG 64
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
+ ++ACNT+ L D + + LG + ++ + S + +L+TPAT R
Sbjct: 65 VGVLLMACNTSNALALDVAVA-EAGVPVLGLIDSVASVIS---SDRVGVLATPATARSGA 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
IH+ + V +E E+++ D +V
Sbjct: 121 YRRAIHASRPDALVIEVGCPEFVPLIE----AGHRFSPELRRAALAYIAPLLAAAVDTVV 176
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---------PRINTHQTRVFDD 247
L CTHYPL+ + +L P V +D +++ A R LL R
Sbjct: 177 LGCTHYPLLRPLLTELLPAGVVLVDPAEAAAERLGPLLGSLGEAPEVERQGESVVPAVQR 236
Query: 248 HALFLSGKPDIAMRRLMQGFG 268
L ++G PD G
Sbjct: 237 SRLCVTGCPDSFATGAEDWLG 257
>gi|91070144|gb|ABE11066.1| putative aspartate and glutamate racemases:glutamate racemase
[uncultured Prochlorococcus marinus clone HF10-11A3]
Length = 264
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 49/258 (18%), Positives = 105/258 (40%), Gaps = 11/258 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I IFDSGIGG +L + + Y+AD P+G+ ++ + +
Sbjct: 1 MKLKIGIFDSGIGGFTILNSLLKTRKDVEVFYLADTKRIPFGSKNFKEIRLIAKEICNFF 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
DK ++ACNT D L + + ++ +I +L+T AT
Sbjct: 61 ADK-NLDALLVACNTTNACALDIL-EDNLKIPCFDLINSVSGIVDK---KIIGVLATQAT 115
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R +Y I+S I S +E+ + ++ + K
Sbjct: 116 VRSSYYKKAINSKKENTKIFQQECPEFVSEIEKEKLNLH----KLNYLSDLYLRPLINKN 171
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA--RCLLPRINTHQTRVFDDHA 249
+ ++L C+HYPLI R+ + +D S ++ ++ + + +++ +++
Sbjct: 172 IEELILGCSHYPLIYDFLRKKLDSNIKIIDPSVALVKKFNESFAIQKTYCYESLSYENVE 231
Query: 250 LFLSGKPDIAMRRLMQGF 267
F++ + D+ +++ F
Sbjct: 232 FFVTSEKDVFFKKVKFWF 249
>gi|301597891|ref|ZP_07242899.1| glutamate racemase [Acinetobacter baumannii AB059]
Length = 197
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 5/200 (2%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
N I + DSG+GGL + + +R +P IY AD PYG+ E + R L S+
Sbjct: 3 NNNNPIGMIDSGLGGLSLFKHIRQALPNEDIIYFADSKYVPYGDKESDWIVSRTTHLISN 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
++ + + V+ACNT + + +R+ S+ + PA+K A A TQS I++L+T
Sbjct: 63 LVTQGKCKAIVVACNTMTAVAIETIRAQI-SVPLIAIEPAVKPAVAITQSKHIAVLATAT 121
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ +LI +Y + LV + LA ++E E+K +E +
Sbjct: 122 TVKGKNLKSLIETYAQDIKVSLVPCIGLAEKIETGKA----YTAEVKDYLENILAPLVEQ 177
Query: 191 RTDVIVLACTHYPLIVHVFR 210
+ D I+L CTHYP + +
Sbjct: 178 KVDTIILGCTHYPFVSDTIQ 197
>gi|255263591|ref|ZP_05342933.1| glutamate racemase [Thalassiobium sp. R2A62]
gi|255105926|gb|EET48600.1| glutamate racemase [Thalassiobium sp. R2A62]
Length = 269
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 54/266 (20%), Positives = 97/266 (36%), Gaps = 20/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL VL + +P+ F+Y AD PYG + + + L
Sbjct: 2 AVGVFDSGLGGLTVLSAVAARLPDVPFVYYADSAHAPYGVRDAEDIFQLTEKAV-RHLWD 60
Query: 75 YQPVLSVIACNTAFTLIKDELRS--TFPSMAFLGAVPAIKQAAAYTQS-----------G 121
L ++ACNTA ++ LG + +A
Sbjct: 61 NGCDLVILACNTASAAALRRMQEAGVPDGKRVLGVFVPLIEALTERDWGDNSPPREVDVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +EE + + E ++ ++
Sbjct: 121 HVALFATPATVSSRAFQRELAFRAVGVDVEAQACGGVVDAIEEG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+++ D +L CTHYPL+ +F+ V L +D +A L R
Sbjct: 179 AL--KRKMPTPDAAILGCTHYPLMQDIFQAALGPDVRVLSQADLVADSLADYLERRPAMA 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+G PD R Q
Sbjct: 237 GGGEP--RFLTTGDPDQVSVRATQFL 260
>gi|154249839|ref|YP_001410664.1| glutamate racemase [Fervidobacterium nodosum Rt17-B1]
gi|154153775|gb|ABS61007.1| glutamate racemase [Fervidobacterium nodosum Rt17-B1]
Length = 276
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 55/255 (21%), Positives = 104/255 (40%), Gaps = 22/255 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGGL VL+K+ +P H+IYVAD + PYG ++ + L +
Sbjct: 3 IGLFDSGIGGLSVLKKLIETLP-AHYIYVADTMRAPYGTKSSETIETFSREIIG-FLMEK 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ ACNT + R+ F + + + A A ++ ++++ T T++
Sbjct: 61 KVERIFAACNT-SDSTLSKYRNNF-RIPYHSIIQAGVSA---SKYERVAVIGTHTTVQSG 115
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
N + + + + S VEE + E +K + D +
Sbjct: 116 IYKNALE--AKGKKVMQRPAQLFVSLVEEGIFYGNMVEAVVKF----YLEPFRKFKPDEL 169
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTH+P + + ++ V +D +D + R L+ +++
Sbjct: 170 ILGCTHFPFLKDIIMRVMG-NVRVIDPADELVREVSHLV-------LNGRPFVEFYVTSN 221
Query: 256 PDIAMRRLMQGFGLK 270
PD R++ + G +
Sbjct: 222 PDEFERKIKK-IGFR 235
>gi|260575249|ref|ZP_05843249.1| glutamate racemase [Rhodobacter sp. SW2]
gi|259022509|gb|EEW25805.1| glutamate racemase [Rhodobacter sp. SW2]
Length = 270
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 54/266 (20%), Positives = 96/266 (36%), Gaps = 19/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL VL ++ +PE F+Y+ D+ PYG + L
Sbjct: 2 AVGVFDSGLGGLTVLDALQKRLPEVPFVYLGDNAHAPYGVRTAEDIFNLTCAAVER-LWA 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQS-----------G 121
L ++ACNTA ++ ++ P LG + +A Q
Sbjct: 61 EGCDLVILACNTASASALKRMQESWVPPGKRVLGVFVPLIEALTERQWGDNSPPREVDVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + +E+ + E ++ +E
Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQPCGGVVDAIEQG--DEILAEALVRSHVE 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++ VL CTHYPL+ H+F + V ++ +A L R
Sbjct: 179 AL--KRRMPLPQAAVLGCTHYPLMQHIFAEALGPGVKVYSQANLVAESLADYLTRRPEFL 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+G P R Q
Sbjct: 237 GSGTAS-KFLTTGDPAAVSNRATQFL 261
>gi|33861174|ref|NP_892735.1| putative aspartate and glutamate racemase:glutamate racemase
[Prochlorococcus marinus subsp. pastoris str. CCMP1986]
gi|33639906|emb|CAE19076.1| Putative aspartate and glutamate racemases:Glutamate racemase
[Prochlorococcus marinus subsp. pastoris str. CCMP1986]
Length = 264
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 49/258 (18%), Positives = 104/258 (40%), Gaps = 11/258 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ I IFDSGIGG +L + + Y+AD PYGN ++ + +
Sbjct: 1 MKLKIGIFDSGIGGFTILSALMKTREDIEVFYLADTKRVPYGNKNIEQIR-FIAKDICNW 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ +IACNT D L + + ++ + I +L+TPAT
Sbjct: 60 FKDKNLDVLLIACNTTNACALDIL-ENNLQIPCFDLINSVSEIVTK---KYIGVLATPAT 115
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ +Y +I S + + +E+ + +++ + +
Sbjct: 116 IKTSYYKKIIESKRENVQVFQQACPEFVPEIEK----TNLDLNKLNYLSDLYINPLLKEN 171
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA--RCLLPRINTHQTRVFDDHA 249
+ I+L C+HYPLI +V + + +D S ++ L+P+ ++++ D+
Sbjct: 172 IEEIILGCSHYPLIYNVLKSKVHSNIRIIDPSAALVNNFNNSFLIPKNYSYESTSSDNIK 231
Query: 250 LFLSGKPDIAMRRLMQGF 267
F++ + +++
Sbjct: 232 FFVTQNSEDFSKKVKYWL 249
>gi|224372568|ref|YP_002606940.1| glutamate racemase [Nautilia profundicola AmH]
gi|223588690|gb|ACM92426.1| glutamate racemase [Nautilia profundicola AmH]
Length = 245
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 60/254 (23%), Positives = 105/254 (41%), Gaps = 14/254 (5%)
Query: 17 LIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+FDSGIGGL V ++ + + IY D PYGN + + + + L +
Sbjct: 5 GVFDSGIGGLSVASELLKSKLFDE-IIYFGDTARVPYGNKNESTIIRYSLEALE-FLKNF 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACN+A ++ DELR +G + A +A ++ I + T T++
Sbjct: 63 DIDFLVVACNSASSVAIDELRR-EAGFPVVGVIEAGVKALDAAKTSNILLTGTKRTIQSN 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
N++ Q +I V++ + VEE KI ++ E F + + D +
Sbjct: 122 KYQNMLLDLGYQ-NIISVATPLFVPLVEEGITEGKIVDEV----FELYFGDIDKSSIDYV 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYP + F++ P + + +I LL + + LF S
Sbjct: 177 ILGCTHYPFLAKSFKKHFP-NAKLIHSGQAIVE----LLKNEYGLKEKSDTSIKLFASDN 231
Query: 256 PDIAMRRLMQGFGL 269
P+ + + L
Sbjct: 232 PEELRSKAKEWLNL 245
>gi|315125844|ref|YP_004067847.1| glutamate racemase [Pseudoalteromonas sp. SM9913]
gi|315014358|gb|ADT67696.1| glutamate racemase [Pseudoalteromonas sp. SM9913]
Length = 262
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 78/245 (31%), Positives = 113/245 (46%), Gaps = 6/245 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I++FDSGIGG VL+ ++ +P + Y D+ PYG + RL L I
Sbjct: 1 MSAHIMVFDSGIGGTTVLEHIQQSIPHAQYSYFMDNALLPYGAQSQQTIIHRLCGLIQFI 60
Query: 72 LDK-YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
D+ L VIACNTA T +R + +G VPAIK AA TQS I +L+TPA
Sbjct: 61 EDESLNVDLIVIACNTASTSALSSVRQ-ITDIPIVGVVPAIKPAAQLTQSKHIGLLATPA 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ YT LI + S L SS+ L + E + D++ E++ K
Sbjct: 120 TVSSPYTDALIKEHASSITTSLYSSVELVTLAETLFFTQHLDIDKLHTELDRL---NINK 176
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
DV+VL CTH+P++ V LD+ +IA+R LL + H
Sbjct: 177 DIDVLVLGCTHFPILAKPISDYFNTQVQLLDSGAAIAKRVSSLLKLSDNQAGIKKPLH-Y 235
Query: 251 FLSGK 255
+ +
Sbjct: 236 YATAD 240
>gi|169824250|ref|YP_001691861.1| glutamate racemase [Finegoldia magna ATCC 29328]
gi|167831055|dbj|BAG07971.1| glutamate racemase [Finegoldia magna ATCC 29328]
Length = 261
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 58/263 (22%), Positives = 109/263 (41%), Gaps = 13/263 (4%)
Query: 6 YPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
Y +K I DSG+GGL V +K++ LMP +IY AD PYG+ + K
Sbjct: 2 YSKQKPYNK-IGFVDSGLGGLTVFKKVKKLMPNKEYIYFADSANVPYGSKTREQMIKISE 60
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI 125
+ ++ Q L V+ACNT ++ +RS +K A T + + +
Sbjct: 61 NIV-RFFNEQQIDLLVVACNTLTSIALSHMRSIANFDIIGVVEYGVKSALQTTSNKKVGV 119
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
++T AT+ L+ + + + + VEE +++I K++E
Sbjct: 120 IATKATVDNGLYKKLLEQ--NDIEVCQSACLDFVGFVEEDCK----DKEKILKKVEEYLK 173
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
D I+L CTHYP+++ ++ + + ++D +DS++ + +
Sbjct: 174 PIVEFGADTIILGCTHYPILIEYLKEYTGENITFVDPADSLSEDIYEI-----CGNYQNK 228
Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268
D +++ P + G
Sbjct: 229 CDIKYYVTKNPSDFKINGSKIIG 251
>gi|16079734|ref|NP_390558.1| glutamate racemase [Bacillus subtilis subsp. subtilis str. 168]
gi|221310614|ref|ZP_03592461.1| hypothetical protein Bsubs1_14656 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221314937|ref|ZP_03596742.1| hypothetical protein BsubsN3_14572 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221319859|ref|ZP_03601153.1| hypothetical protein BsubsJ_14488 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221324139|ref|ZP_03605433.1| hypothetical protein BsubsS_14627 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|11387238|sp|O05412|MURI2_BACSU RecName: Full=Glutamate racemase 2
gi|1934638|gb|AAB80890.1| YrpC [Bacillus subtilis subsp. subtilis str. 168]
gi|2635126|emb|CAB14622.1| glutamate racemase [Bacillus subtilis subsp. subtilis str. 168]
Length = 265
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 66/242 (27%), Positives = 105/242 (43%), Gaps = 9/242 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I FDSGIGG+ VL + ++P +I+ AD + PYG +K+ + F ++ L
Sbjct: 2 KIGFFDSGIGGMTVLYEAIKVLPYEDYIFYADTLNVPYGEKSKGKVKEYI-FNAAEFLAS 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--STPATL 132
VIACNTA ++ ++LR F +G PA+K A +L +T TL
Sbjct: 61 QNIKALVIACNTATSIAIEDLRRNF-DFPIIGIEPAVKPAINKCTEERKRVLVVATNLTL 119
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ NL+ + ++ L E ED+I K ++ + K+
Sbjct: 120 KEEKFHNLVKEIDHHDLVDCLALPGLVEFAE----NFDFSEDKIIKYLKNELSSFDLKQY 175
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
IVL CTH+P + F +L VD + S A++ + +L N + F
Sbjct: 176 GTIVLGCTHFPFFKNSFEKLFGIKVDMISGSVGTAKQLKKVLADRNQL-GKGSGSITFFN 234
Query: 253 SG 254
SG
Sbjct: 235 SG 236
>gi|321312180|ref|YP_004204467.1| glutamate racemase [Bacillus subtilis BSn5]
gi|320018454|gb|ADV93440.1| glutamate racemase [Bacillus subtilis BSn5]
Length = 265
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 66/242 (27%), Positives = 105/242 (43%), Gaps = 9/242 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I FDSGIGG+ VL + ++P +I+ AD + PYG +K+ + F ++ L
Sbjct: 2 KIGFFDSGIGGMTVLYEAIKVLPYEDYIFYADTLNVPYGEKSKGKVKEYI-FNAAEFLAS 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--STPATL 132
VIACNTA ++ ++LR F +G PA+K A +L +T TL
Sbjct: 61 QNIKALVIACNTATSIAIEDLRRNF-DFPIIGIEPAVKPAINKCTEERKRVLVVATNLTL 119
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ NL+ + ++ L E ED+I K ++ + K+
Sbjct: 120 KEEKFHNLVKEIDHHDLVDCLALPGLVEFAE----NFDFSEDKIIKYLKNELSSFDLKQY 175
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
IVL CTH+P + F +L VD + S A++ + +L N + F
Sbjct: 176 GTIVLGCTHFPFFKNSFEKLFGIKVDMISGSVGTAKQLKKVLADRNQL-GKGSGSITFFN 234
Query: 253 SG 254
SG
Sbjct: 235 SG 236
>gi|310780269|ref|YP_003968601.1| glutamate racemase [Ilyobacter polytropus DSM 2926]
gi|309749592|gb|ADO84253.1| glutamate racemase [Ilyobacter polytropus DSM 2926]
Length = 261
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 57/256 (22%), Positives = 104/256 (40%), Gaps = 10/256 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG+ V++++ ++PE IY D+ F Y N +++ M + L
Sbjct: 3 KIGVFDSGVGGITVVKEINKILPEDTIIYYGDNKNFHYENLSVDQIREHCMKIVE-FLVL 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP-AIKQAAAYTQSGLISILSTPATLR 133
V+AC+ A D L+S F + +G + K T + I I +TPAT+
Sbjct: 62 NGVDAVVVACSVATAAALDTLKSRFAHIPIVGVIDTGAKVGVEMTSNNSIGIFATPATVA 121
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + + + L +E+ ++ +K+ + ++TD
Sbjct: 122 MDAYPKALRNINRKISVFQKGCPKLCYMIEDGWEDTLENDEVVKEYLS-----YIPEQTD 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL-PRINTHQTRVFDDHALFL 252
++L CTHYPLI HV + +D++ A + L + + D ++
Sbjct: 177 TLLLGCTHYPLIRHVIARYFKG--TIVDSAKETADTVKKELFLKAGKSKKNKNGDPEYYI 234
Query: 253 SGKPDIAMRRLMQGFG 268
SG G
Sbjct: 235 SGDIKKFKEVAADFLG 250
>gi|77359223|ref|YP_338798.1| glutamate racemase [Pseudoalteromonas haloplanktis TAC125]
gi|76874134|emb|CAI85355.1| glutamate racemase [Pseudoalteromonas haloplanktis TAC125]
Length = 265
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 74/248 (29%), Positives = 117/248 (47%), Gaps = 8/248 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I++FDSGIGG VL+ ++ +P+ + Y D+ PYG + RL L I
Sbjct: 1 MSAHIMVFDSGIGGTTVLEHIQQSIPDAQYSYFMDNALLPYGAQSQQTIINRLCALIHFI 60
Query: 72 LDK-YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+ L VIACNTA T +R ++ +G VPAIK AA TQS I +L+TPA
Sbjct: 61 NQQALNVDLIVIACNTASTSALGAVRQ-ITTIPIVGVVPAIKPAAQLTQSKHIGLLATPA 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ YT LI + + + L SS+ L + E + ++ +E++ +
Sbjct: 120 TISSPYTRTLIQEHTNNIAVSLYSSVELVTLAERLFFEQSLDTTKLHQELDRL---NIDQ 176
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR---VFDD 247
DV+VL CTH+P++ Q V LD+ +IA+R L+ ++N
Sbjct: 177 SIDVLVLGCTHFPILAEPISQYFNRKVQLLDSGAAIAKRVHYLISQLNLTNNNIADTKKP 236
Query: 248 HALFLSGK 255
+ +
Sbjct: 237 LQYYATAS 244
>gi|238855622|ref|ZP_04645923.1| glutamate racemase [Lactobacillus jensenii 269-3]
gi|260665318|ref|ZP_05866166.1| glutamate racemase [Lactobacillus jensenii SJ-7A-US]
gi|282933004|ref|ZP_06338398.1| glutamate racemase [Lactobacillus jensenii 208-1]
gi|238831766|gb|EEQ24102.1| glutamate racemase [Lactobacillus jensenii 269-3]
gi|260560822|gb|EEX26798.1| glutamate racemase [Lactobacillus jensenii SJ-7A-US]
gi|281302858|gb|EFA95066.1| glutamate racemase [Lactobacillus jensenii 208-1]
Length = 266
Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats.
Identities = 42/241 (17%), Positives = 86/241 (35%), Gaps = 7/241 (2%)
Query: 27 IVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNT 86
VL+K+ +P +++ D PYG+ + + + L + + ACNT
Sbjct: 17 TVLKKVMKKLPNEATVFIGDQAHMPYGDKTTEEVIELTRRSVN-FLLSKNVKVIIFACNT 75
Query: 87 AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVS 146
A + ++ AA T++ ++++ T T+ S I
Sbjct: 76 ATAAAMEVIQKEITPQIIGVIQSGSLAAARTTKNNKVAVIGTHVTIESHAYSREIKFRNP 135
Query: 147 QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIV 206
+ +++ LA VE D ++ ++ + K D +VL CTHYP+I
Sbjct: 136 DIEVTELATPQLAPLVE-AQRDYAYNIDVVRDSLDS----LKEKEFDTMVLGCTHYPIIE 190
Query: 207 HVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQG 266
++ + +D +D +A+ +L R + +G +
Sbjct: 191 KEISKVVGSTIKLVDPADQVAQYTENVLKRDGMLA-GKKGKREYYTTGDCQKFTEIARKW 249
Query: 267 F 267
Sbjct: 250 L 250
>gi|254440325|ref|ZP_05053819.1| glutamate racemase [Octadecabacter antarcticus 307]
gi|198255771|gb|EDY80085.1| glutamate racemase [Octadecabacter antarcticus 307]
Length = 269
Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats.
Identities = 54/266 (20%), Positives = 96/266 (36%), Gaps = 20/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL ++ +P+ F+Y AD PYG + + L
Sbjct: 2 AVGIFDSGLGGLTVLDAVQQRLPDVPFVYYADSANAPYGVRTADDIYNLTTA-ATQALFD 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA---VPAIKQAAAYTQSG---------- 121
L ++ACNTA ++ ++ VP I+ +
Sbjct: 61 AGCDLVILACNTASAAALRRMQESWVPKDKRVLGVFVPLIEAMTERSWGDNSPPREVGVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +EE + + E ++ ++
Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIGVDVEGQACGGVVDAIEEG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+++ D VL CTHYP++ F+ V +D +A L R
Sbjct: 179 AL--KRKMPEPDAAVLGCTHYPMMQDAFQTALGADVKVFSQADLVADSLADYLQRRPEMA 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
SG P R Q
Sbjct: 237 GG--GTSKFLTSGDPKRVSDRATQFL 260
>gi|303234940|ref|ZP_07321565.1| glutamate racemase [Finegoldia magna BVS033A4]
gi|302494058|gb|EFL53839.1| glutamate racemase [Finegoldia magna BVS033A4]
Length = 261
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 58/263 (22%), Positives = 109/263 (41%), Gaps = 13/263 (4%)
Query: 6 YPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
Y +K I DSG+GGL V +K++ LMP +IY AD PYG+ + K
Sbjct: 2 YSKQKPYNK-IGFVDSGLGGLTVFKKVKKLMPNKEYIYFADSANVPYGSKTREQMIKISE 60
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI 125
+ ++ Q L V+ACNT ++ +RS +K A T + + +
Sbjct: 61 NIV-RFFNEQQIDLLVVACNTLTSIALSHMRSIANFDIIGVVEYGVKSALQATYNKKVGV 119
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
++T AT+ L+ + + + + VEE +++I K++E
Sbjct: 120 IATKATVDNGLYKKLLEQ--NDIEVCQSACLDFVGFVEEDCK----DKEKILKKVEEYLK 173
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
D I+L CTHYP+++ ++ + + ++D +DS++ + +
Sbjct: 174 PIVEFGADTIILGCTHYPILIEYLKEYTGENITFVDPADSLSEDIYEI-----CGNYQNK 228
Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268
D +++ P + G
Sbjct: 229 CDIKYYVTKNPSDFKINGSKIIG 251
>gi|85373785|ref|YP_457847.1| glutamate racemase [Erythrobacter litoralis HTCC2594]
gi|84786868|gb|ABC63050.1| glutamate racemase [Erythrobacter litoralis HTCC2594]
Length = 256
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 77/256 (30%), Positives = 122/256 (47%), Gaps = 6/256 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FD+G+GGL VL ++R ++P IY AD G PYG + + R+ L + ++YQP
Sbjct: 1 MFDTGVGGLTVLAELRKVLPNAPVIYAADYAGLPYGTKTEAEVAARVCGLLGRMSERYQP 60
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
IACNTA T+ +R + +G VPAIK AAA T++G+I +L T AT+R+ Y
Sbjct: 61 RAICIACNTASTIALGMVREVL-EVPIIGTVPAIKPAAAMTETGVIGLLGTAATVRQPYV 119
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
L + S + ++ L E G + + ++ E+ + R D +VL
Sbjct: 120 DRLEAEFASDTVLIRFAASGLVDLAEAKLRGETVGTNSLRAEVRALLEAENADRIDTLVL 179
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257
ACTH+PL+ Q+ V + ++ IARR + +T +G
Sbjct: 180 ACTHFPLLEEELLQVFGPQVRMVHGAEGIARRIAAVTHGQQFARTTPD---RFITTGSAK 236
Query: 258 IAMRRL--MQGFGLKS 271
A + +GL S
Sbjct: 237 DAADLAHCLSQYGLDS 252
>gi|254292511|ref|YP_003058534.1| glutamate racemase [Hirschia baltica ATCC 49814]
gi|254041042|gb|ACT57837.1| glutamate racemase [Hirschia baltica ATCC 49814]
Length = 265
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 84/244 (34%), Positives = 128/244 (52%), Gaps = 5/244 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +L+FDSG+GGL ++ +R +P+ Y AD FPYG D L+ RL L +
Sbjct: 1 MNR-VLVFDSGVGGLSIVNSIREQIPDTIVDYAADAGFFPYGLKSDEELQARLPKLCKAL 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
++K +P + V+ACNTA TL +R + +G VPAIK AA TQ+G I +L+TP T
Sbjct: 60 IEKAKPDIFVMACNTASTLSLASVREIV-DIPVVGTVPAIKPAAEITQTGTIGVLATPGT 118
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+RR Y +L + + + + L E + G + +D I F EG+
Sbjct: 119 IRRQYLDDLERQFAAHIKVVRHGTAGLVELAERHVRGEILSQDMFDNAISPLFSGAEGQN 178
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVD-WLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
DV+VLACTH+PLI ++ P V +D+ D+I R+ LL R ++ D +
Sbjct: 179 IDVVVLACTHFPLIRDQIQKACPAYVTKLIDSGDAIGRQVGRLLVREK--SSKKSPDACV 236
Query: 251 FLSG 254
L+G
Sbjct: 237 LLTG 240
>gi|254525989|ref|ZP_05138041.1| glutamate racemase [Prochlorococcus marinus str. MIT 9202]
gi|221537413|gb|EEE39866.1| glutamate racemase [Prochlorococcus marinus str. MIT 9202]
Length = 264
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 53/261 (20%), Positives = 105/261 (40%), Gaps = 11/261 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + IFDSGIGG +L + + Y+AD P+G ++ + +
Sbjct: 1 MNLKVGIFDSGIGGFTILNSLLKTRKDVEVFYLADTKRIPFGGKNFKEIRLIAKEICNFF 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+DK ++ACNT D + + F I + +I +L+T T
Sbjct: 61 VDK-NLDALLVACNTTNACALDIMENNLKVPCF----DLINSVSGIVDKQIIGVLATQTT 115
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R +Y N I+S I S +E+ K+ D++ + K
Sbjct: 116 VRSSYYKNAINSKKENTIIFQQECPEFVSEIEK----EKLNLDKLNYLSDLYLRPLINKN 171
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL--LPRINTHQTRVFDDHA 249
+ ++L C+HYPLI R+ + +D S ++ +R +P+ ++ +++
Sbjct: 172 IEELILGCSHYPLIYDFLRKKLDSNITIIDPSVALIKRFNKFFDIPKTACYERLSYENVE 231
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
F++ + D ++ G+
Sbjct: 232 FFVTSERDEFSNKVKFWLGIN 252
>gi|34496658|ref|NP_900873.1| glutamate racemase [Chromobacterium violaceum ATCC 12472]
gi|34102513|gb|AAQ58878.1| glutamate racemase [Chromobacterium violaceum ATCC 12472]
Length = 256
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 61/251 (24%), Positives = 105/251 (41%), Gaps = 6/251 (2%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
++DSG+GGL V + +R +P++ Y+AD PYG + R + + ++ +
Sbjct: 1 MYDSGLGGLSVWRAVRAALPDWPITYLADQAYCPYGPRSREEIIARALKVGHYLVSQGAT 60
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
+L V I S+ +G PAIK AAA +++G I++L+T TL
Sbjct: 61 LLVVACNTATTAAIAALRAEL--SLPIVGIEPAIKPAAAMSRTGRIAVLATEYTLASERV 118
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
L+ + + + +VE + ++K +E + D I L
Sbjct: 119 KTLLDDHAGDVDVLRRAGHGWVEQVEAGELSSERTRALVRKVVE----PLIDENIDHIAL 174
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257
CTHYP + + R+++ + D +++IARR LL R + S
Sbjct: 175 GCTHYPFLAPLIREVTGDGIQLYDPAEAIARRVCDLLRRHGCDSQGDRYYRFITTSDDAG 234
Query: 258 IAMRRLMQGFG 268
RL Q G
Sbjct: 235 EMALRLPQLIG 245
>gi|325273239|ref|ZP_08139520.1| glutamate racemase [Pseudomonas sp. TJI-51]
gi|324101626|gb|EGB99191.1| glutamate racemase [Pseudomonas sp. TJI-51]
Length = 187
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 50/188 (26%), Positives = 87/188 (46%), Gaps = 5/188 (2%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ + DSG+GGL VL +++ L+P +YVAD PYG +++R +
Sbjct: 5 SAPVGVMDSGVGGLSVLAEIQRLLPNETLLYVADCGHVPYGEKSPDYIRERCRRIAGFFR 64
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ V+ACNTA +LR +P+ +G PA+K AAA T+SG++ +L+T TL
Sbjct: 65 -EQGAKALVLACNTATVAAAADLRELYPNWPLVGMEPAVKPAAAATRSGVVGVLATTGTL 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + L+ + S + L +E + +++ + G
Sbjct: 124 QSAKFAALLDRFASDVLVITQPCPGLVELIET----GDLCSPTLRQMLWGYVEPLLAAGC 179
Query: 193 DVIVLACT 200
D ++L CT
Sbjct: 180 DTLILGCT 187
>gi|77463505|ref|YP_353009.1| glutamate racemase [Rhodobacter sphaeroides 2.4.1]
gi|123591864|sp|Q3J276|MURI_RHOS4 RecName: Full=Glutamate racemase
gi|77387923|gb|ABA79108.1| glutamate racemase [Rhodobacter sphaeroides 2.4.1]
Length = 270
Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats.
Identities = 51/266 (19%), Positives = 98/266 (36%), Gaps = 19/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL VL ++ +PE F+Y D+ PYG + + ++ L
Sbjct: 2 AVGVFDSGLGGLTVLDAVQRRLPEVPFVYFGDNAHAPYGVRDADDIFHLTCA-ATERLWA 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQS-----------G 121
L ++ACNTA ++ T+ LG + +A Q
Sbjct: 61 EGCDLVILACNTASAAALKRMQETWIPKDKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + +E+ + E ++ +E
Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQPCGGVVDAIEQG--DEILAEALVRSHVE 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++ +L CTHYPL+ +F++ V ++ +A L R
Sbjct: 179 AL--KRRMPHPQAAILGCTHYPLMEPIFQEALGPEVSVYSQANLVAESLADYLARKPEFA 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ +G P + Q
Sbjct: 237 GDGTES-KFLTTGDPRSVSNKATQFL 261
>gi|123968208|ref|YP_001009066.1| putative aspartate and glutamate racemases:glutamate racemase
[Prochlorococcus marinus str. AS9601]
gi|123198318|gb|ABM69959.1| Putative aspartate and glutamate racemases:Glutamate racemase
[Prochlorococcus marinus str. AS9601]
Length = 264
Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats.
Identities = 54/258 (20%), Positives = 107/258 (41%), Gaps = 11/258 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I IFDSGIGG +L + + Y+AD PYGN ++ + +
Sbjct: 1 MILKIGIFDSGIGGFTILNSLLKTRKDVKVFYLADTKRIPYGNKNSKEIRLIAKEICTFF 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+DK ++ACNT D L F I + +I +L+T T
Sbjct: 61 VDK-NLDALLVACNTTNACALDILEDNLKVPCF----DLINSVSEIVDKQIIGVLATQRT 115
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R +Y I++ I S +E+ K+ D++ + K
Sbjct: 116 VRSSYYKKAINAKKGNTIIFQQECPEFVSEIEK----EKLNLDKLNSLSDLYLRPLINKN 171
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA--RCLLPRINTHQTRVFDDHA 249
+ ++L C+HYPLI FR+ + +D S ++ ++ + + ++++ +++
Sbjct: 172 IEELILGCSHYPLIYDFFRKKLDSNIKIIDPSVALIKKFNESFAISKTTSYESLFYENVD 231
Query: 250 LFLSGKPDIAMRRLMQGF 267
F++ + D ++++ F
Sbjct: 232 FFVTSEKDKFLKKVKFWF 249
>gi|184155007|ref|YP_001843347.1| glutamate racemase [Lactobacillus fermentum IFO 3956]
gi|417584|sp|Q03469|MURI_LACFE RecName: Full=Glutamate racemase
gi|229486241|sp|B2GB35|MURI_LACF3 RecName: Full=Glutamate racemase
gi|149549|gb|AAA25241.1| glutamate racemase [Lactobacillus fermentum]
gi|183226351|dbj|BAG26867.1| glutamate racemase [Lactobacillus fermentum IFO 3956]
Length = 268
Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats.
Identities = 48/255 (18%), Positives = 98/255 (38%), Gaps = 5/255 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I + DSG+GGL V++ ++ +P I+V D FPYG + +++ + + L
Sbjct: 3 NRPIGVMDSGLGGLSVVRVIQQKLPNEEVIFVGDQGHFPYGTKDQAEVRQLALSI-GAFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K+ + V+ACNTA L++ P P + A A + G I +++T AT
Sbjct: 62 LKHDVKMMVVACNTATAAALPALQAALPIPVIGVIEPGARAALAQDKKGPIGVIATTATT 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + ++ + VE G + ++ + + +
Sbjct: 122 TAGAYPATIERLAPGTPVIAKATQPMVEIVEHGQTG----TAKAQEVVSEQLMTFKEHPV 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
+++ CTH+P + + V +D + A+ L + ++ L+
Sbjct: 178 KTLIMGCTHFPFLAPEISKAVGPTVALVDPAKETVATAKSWLEQHQAMGNHAHPNYHLYS 237
Query: 253 SGKPDIAMRRLMQGF 267
+G + +
Sbjct: 238 TGNLPDLRAGVNKWL 252
>gi|330994654|ref|ZP_08318577.1| Glutamate racemase [Gluconacetobacter sp. SXCC-1]
gi|329758295|gb|EGG74816.1| Glutamate racemase [Gluconacetobacter sp. SXCC-1]
Length = 279
Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats.
Identities = 86/253 (33%), Positives = 133/253 (52%), Gaps = 2/253 (0%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL FDSGIGGL V+ ++R L+P Y+AD +PYG D L+ R++ L + +
Sbjct: 4 ILAFDSGIGGLGVVAQLRALLPGVPIDYLADTAVYPYGEQPDALLRHRIVTLLGQAIARL 63
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+P + VIACNTA TL D LR+T+ + F+G VP IK AA +T++G I +L+T AT+RR
Sbjct: 64 RPSVVVIACNTASTLALDSLRATY-GIPFVGCVPPIKWAADHTRTGTIGLLATRATVRRP 122
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
Y +L + +C + + LA E G+ ++ E++G F + G DV+
Sbjct: 123 YLQDLHARFAPRCTLLAHGARGLADMAERAFRGLPPDRTQLAIELDGLFGQPGGAAIDVV 182
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+ CTHY ++ R+ P V WLD + ++AR+A +L + +
Sbjct: 183 GIGCTHYTFLLDALRESGPAGVTWLDPAPAVARQAARVLTEQAPAIPCATGGERVCFTAL 242
Query: 256 PDIAMRRLMQGFG 268
P L+ G G
Sbjct: 243 PPDFPA-LLPGLG 254
>gi|47776279|dbj|BAD20743.1| glutamate racemase [Bacillus subtilis]
Length = 265
Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats.
Identities = 66/242 (27%), Positives = 105/242 (43%), Gaps = 9/242 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I FDSGIGG+ VL + ++P +I+ AD + PYG +K+ + F ++ L
Sbjct: 2 KIGFFDSGIGGMTVLYEAIKVLPYEDYIFYADTLNVPYGEKSKGRVKEYI-FNAAEFLAS 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--STPATL 132
VIACNTA ++ ++LR F +G PA+K A +L +T TL
Sbjct: 61 QNIKALVIACNTATSIAIEDLRRNF-DFPIIGIEPAVKPAINKCTEERKRVLVVATNLTL 119
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ NL+ + ++ L E ED+I K ++ + K+
Sbjct: 120 KEEKFHNLVKEIDHHDLVDCLALPGLVEFAE----NFDFSEDKIIKYLKNELSSFDLKQY 175
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
IVL CTH+P + F +L VD + S A++ + +L N + F
Sbjct: 176 GTIVLGCTHFPFFKNSFEKLFGIKVDMISGSVGTAKQLKKVLADRNQL-GKGSGSITFFD 234
Query: 253 SG 254
SG
Sbjct: 235 SG 236
>gi|332558385|ref|ZP_08412707.1| glutamate racemase [Rhodobacter sphaeroides WS8N]
gi|332276097|gb|EGJ21412.1| glutamate racemase [Rhodobacter sphaeroides WS8N]
Length = 270
Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats.
Identities = 51/266 (19%), Positives = 98/266 (36%), Gaps = 19/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL VL ++ +PE F+Y D+ PYG + + ++ L
Sbjct: 2 AVGVFDSGLGGLTVLDAVQRRLPEVPFVYFGDNAHAPYGVRDADDIFHLTCA-ATERLWA 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQS-----------G 121
L ++ACNTA ++ T+ LG + +A Q
Sbjct: 61 EGCDLVILACNTASAAALKRMQETWIPKDKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + +E+ + E ++ +E
Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQPCGGVVDAIEQG--DEILAEALVRSHVE 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++ +L CTHYPL+ +F++ V ++ +A L R
Sbjct: 179 AL--KRRMPHPQAAILGCTHYPLMEPIFQEALGPEVSVYSQANLVAESLADYLARKPEFA 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ +G P + Q
Sbjct: 237 GAGTES-KFLTTGDPRSVSNKATQFL 261
>gi|332159762|ref|YP_004296339.1| glutamate racemase [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|318603894|emb|CBY25392.1| glutamate racemase [Yersinia enterocolitica subsp. palearctica Y11]
gi|325663992|gb|ADZ40636.1| glutamate racemase [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
Length = 240
Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats.
Identities = 73/238 (30%), Positives = 122/238 (51%), Gaps = 6/238 (2%)
Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95
MP+ H+IY D+V FPYG + +R++ + + + ++ + VIACNTA T+ L
Sbjct: 1 MPDLHYIYAFDNVAFPYGEKSGEFIVERVLEIVTAVQQRHPLAIVVIACNTASTVSLPAL 60
Query: 96 RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS 155
R F + +G VPAIK A T++G++ +L+T T+ +YT +LI + + C I L+ S
Sbjct: 61 RERF-TFPVVGVVPAIKPAVRLTRNGVVGLLATRGTVHASYTQDLIERFATDCKIELLGS 119
Query: 156 MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW 215
L E G + ++ +KK + +E D IVL CTH+PL+ Q+ P
Sbjct: 120 SELVELAETKLHGGVVPKEALKKILHPWLAMREPP--DTIVLGCTHFPLLTEELAQVLPE 177
Query: 216 PVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF--LSGKPDIAMRRLMQGFGLKS 271
+D+ +IARR L+ + ++ A L+ D + ++QG+G S
Sbjct: 178 GTRMVDSGAAIARRTAWLISSQENMISSDEENIAYCMALNADTDALL-PVLQGYGFPS 234
>gi|307719381|ref|YP_003874913.1| glutamate racemase [Spirochaeta thermophila DSM 6192]
gi|306533106|gb|ADN02640.1| glutamate racemase [Spirochaeta thermophila DSM 6192]
Length = 286
Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats.
Identities = 80/259 (30%), Positives = 129/259 (49%), Gaps = 6/259 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+L DSGIGG+ L + F+YVAD FPYG L+ L+ L +D+L
Sbjct: 26 RPVLFLDSGIGGIPYLLWALEHIEGEEFVYVADRAHFPYGPRSHEELEAILVDLVADLLR 85
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+++P L V+ACNTA + LR+ + + F+G VPAIK AA+ T++G++ +L+T TLR
Sbjct: 86 RFRPKLVVLACNTASVVGLPALRARY-EIPFVGVVPAIKPAASLTRTGVVGLLATERTLR 144
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
YT LI +Y + + V S + VE E+E + + + D
Sbjct: 145 DFYTDELIAAYANGARVVKVPSPHIVEFVEHRFIDA--AEEERRTAVREAVERCVAQGAD 202
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
IVL CTH+ + R L+ V +D+ + + RR LL + + R + +L+
Sbjct: 203 TIVLGCTHFVFLEAQIRSLAGEHVQVIDSREGVGRRLVHLLSYLPCGR-RGPSTASFYLT 261
Query: 254 GK--PDIAMRRLMQGFGLK 270
G+ P+ R + +G+
Sbjct: 262 GRTPPEGRYVRFTRHYGVS 280
>gi|87199816|ref|YP_497073.1| glutamate racemase [Novosphingobium aromaticivorans DSM 12444]
gi|87135497|gb|ABD26239.1| glutamate racemase [Novosphingobium aromaticivorans DSM 12444]
Length = 277
Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats.
Identities = 88/257 (34%), Positives = 127/257 (49%), Gaps = 6/257 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+L+FDSG+GGL VL+K+R ++PE IYVAD+ G PYG + + R+ L + ++
Sbjct: 19 PLLLFDSGVGGLSVLRKVRAVLPEAPVIYVADNAGLPYGAKTEAQIAARVSGLLGRLTER 78
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
P L IACNTA T+ +R + +G VPAIK AAA T++G+I +L T AT+R+
Sbjct: 79 LAPRLVCIACNTASTIALASVREVL-EVPIVGTVPAIKPAAALTRTGVIGLLGTEATIRQ 137
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y L + + H+ + L + E G ++ + G R D
Sbjct: 138 AYVDRLEAEFAADKHLLRHGAPELVAAAEAKLRGERVDPAVYARAAAALRAMPGGDRIDT 197
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VLACTH+PL+ R+ V ++D SD IARR L R D ALF G
Sbjct: 198 VVLACTHFPLVEDELREAFGPEVRFVDGSDGIARRIAHL--TQGQAWRRTEPDLALFTRG 255
Query: 255 KPDIAM---RRLMQGFG 268
D+ G G
Sbjct: 256 GEDVDRLGPALAAHGLG 272
>gi|302380932|ref|ZP_07269394.1| glutamate racemase [Finegoldia magna ACS-171-V-Col3]
gi|302311310|gb|EFK93329.1| glutamate racemase [Finegoldia magna ACS-171-V-Col3]
Length = 261
Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats.
Identities = 59/263 (22%), Positives = 108/263 (41%), Gaps = 13/263 (4%)
Query: 6 YPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
Y +K I DSG+GGL V +K++ LMP +IY AD PYG+ + K
Sbjct: 2 YSKQKPYNK-IGFVDSGLGGLTVFKKVKKLMPNKEYIYFADSANVPYGSKTREQMIKISE 60
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI 125
+ ++ Q L V+ACNT ++ +RS +K A T + + +
Sbjct: 61 NIV-RFFNEQQIDLLVVACNTLTSIALSHMRSIANFDIIGVVEYGVKSALQTTSNKKVGV 119
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
+ST AT+ L+ + + + VEE +++I K++E
Sbjct: 120 ISTKATVDNGLYKKLLEQNDIG--VCQSACLDFVGFVEEDCK----DKEKILKKVEEYLK 173
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
D I+L CTHYP+++ ++ + + ++D +DS++ + +
Sbjct: 174 PIVEFGADTIILGCTHYPILIEYLKEYTGENITFVDPADSLSEDVYEI-----CGNYQNK 228
Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268
D +++ P + G
Sbjct: 229 CDIKYYVTKNPSDFKINGSKIIG 251
>gi|255659131|ref|ZP_05404540.1| glutamate racemase [Mitsuokella multacida DSM 20544]
gi|260848578|gb|EEX68585.1| glutamate racemase [Mitsuokella multacida DSM 20544]
Length = 260
Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats.
Identities = 56/254 (22%), Positives = 95/254 (37%), Gaps = 11/254 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I FDSGIGGL VL ++P+ F++ AD+ PYG +K + F L
Sbjct: 2 KIAFFDSGIGGLSVLHHAMRVLPKEQFVFYADEDNVPYGVKTTDEVKGFVQQAFD-FLVG 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA ++ E+R + + +G PA K+A + + +TP T+
Sbjct: 61 CDVKAIVVACNTATSVAVREMRHRY-DIPIIGMEPAAKKALDLDGEHRVLVAATPITVHG 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
LI + + L+ L E + + + +
Sbjct: 120 KKMQILIDRFDKDHLVDLLPLPRLVEFAEREE----FRSEAVHAYLAQELGRFHLADYSA 175
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VL CTH+ R++ P + ++D ++ R L + + + SG
Sbjct: 176 LVLGCTHFNYFKDTMREIMPENMHFVDGNEGTVRELIRQLDARHELEDLPQ-TVDYYYSG 234
Query: 255 ----KPDIAMRRLM 264
P R
Sbjct: 235 RRVEDPAELARIAR 248
>gi|291485080|dbj|BAI86155.1| putative glutamate racemase [Bacillus subtilis subsp. natto
BEST195]
Length = 265
Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats.
Identities = 66/242 (27%), Positives = 105/242 (43%), Gaps = 9/242 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I FDSGIGG+ VL + ++P +I+ AD + PYG +K+ + F ++ L
Sbjct: 2 KIGFFDSGIGGMTVLYEAIKVLPYEDYIFYADTLNVPYGEKSKGRVKEYI-FNAAEFLAS 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--STPATL 132
VIACNTA ++ ++LR F +G PA+K A +L +T TL
Sbjct: 61 QNIKALVIACNTATSIAIEDLRRNF-DFPIIGIEPAVKPAINKCTEERKRVLVVATNLTL 119
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ NL+ + ++ L E ED+I K ++ + K+
Sbjct: 120 KEEKFHNLVKEIDHHDLVDCLALPGLVEFAE----NFDFSEDKIIKYLKNELSSFDLKQY 175
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
IVL CTH+P + F +L VD + S A++ + +L N + F
Sbjct: 176 GTIVLGCTHFPFFKNSFEKLFGIKVDMISGSVGTAKQLKKVLADRNQL-GKGSGSITFFD 234
Query: 253 SG 254
SG
Sbjct: 235 SG 236
>gi|313896052|ref|ZP_07829606.1| glutamate racemase [Selenomonas sp. oral taxon 137 str. F0430]
gi|312975477|gb|EFR40938.1| glutamate racemase [Selenomonas sp. oral taxon 137 str. F0430]
Length = 262
Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats.
Identities = 59/250 (23%), Positives = 104/250 (41%), Gaps = 5/250 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL R +P+ F++ AD PYG ++ + F ++++
Sbjct: 3 IALFDSGLGGLTVLGHARRALPDEEFLFFADRDHVPYGTKTVDEVRGFVRDAFRFLVEEE 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ VIACNTA ++ DE+R + + +G PA+K+A ++ + + TP T+R
Sbjct: 63 RVEAIVIACNTATSVSADEMRRCY-DIPIIGMEPAVKKALDADRTRRVLVTGTPITVRGE 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
LI +Y + + L+ L E +++ + + + I
Sbjct: 122 KLHRLIDTYDANHLVDLLPLPRLVEFAENQE----FVSPHVEEYLRTALAPFDLAQYSAI 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+ R L P + + D +D + F SG+
Sbjct: 178 VLGCTHFNFFKDTMRSLMPETMTFADGNDGTVEELARRAGLTTQPEGERTAHCTFFRSGR 237
Query: 256 PDIAMRRLMQ 265
+ L +
Sbjct: 238 RVAGAQELAR 247
>gi|322434927|ref|YP_004217139.1| glutamate racemase [Acidobacterium sp. MP5ACTX9]
gi|321162654|gb|ADW68359.1| glutamate racemase [Acidobacterium sp. MP5ACTX9]
Length = 271
Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats.
Identities = 53/258 (20%), Positives = 98/258 (37%), Gaps = 11/258 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+I +FDSG GGL VL+ + L+P ++Y+ D PYG + + + + L
Sbjct: 9 PTIGVFDSGFGGLTVLRALLPLIPGARYLYLGDTARLPYGAKSQQTIARYALSSAA-FLL 67
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ + V+ACNTA L D+L+ P P AA+ + +L+T AT++
Sbjct: 68 EQGIEMLVVACNTATALALDDLKQALPIPVVGVIAPGTAAAASANADTNVLVLATTATVQ 127
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + + +L VEE + + ++ + E
Sbjct: 128 SGAYTRA--CTALGLTAYEKACPLLVPLVEEGWIDHPVTAEVLRIYLTEALEE--APNAT 183
Query: 194 VIVLACTHYPLIVHVFRQ---LSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
++L CTHYPL+ + + P+ +D++ + A I
Sbjct: 184 TLLLGCTHYPLLRPMIERTLTALNHPLKIIDSATA---TAHAAAALIPASAQSAHATCTF 240
Query: 251 FLSGKPDIAMRRLMQGFG 268
+ + + R G
Sbjct: 241 YATDSIEKFQRLGTSFLG 258
>gi|254453816|ref|ZP_05067253.1| glutamate racemase [Octadecabacter antarcticus 238]
gi|198268222|gb|EDY92492.1| glutamate racemase [Octadecabacter antarcticus 238]
Length = 269
Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats.
Identities = 54/266 (20%), Positives = 96/266 (36%), Gaps = 20/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL ++ +P+ F+Y AD PYG + + L
Sbjct: 2 AVGIFDSGLGGLTVLDAVQQRLPDVPFVYYADSANAPYGVRTADDIYNLTTA-ATQALFD 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA---VPAIKQAAAYTQSG---------- 121
L ++ACNTA ++ ++ VP I+ +
Sbjct: 61 AGCDLVILACNTASAAALRRMQESWVPKDKRVLGVFVPLIEAMTERSWGDNSPPREVGVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +EE + + E ++ ++
Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIGVDVEGQACGGVVDAIEEG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+++ D VL CTHYP++ F+ V +D +A L R
Sbjct: 179 AL--KRKMPEPDAAVLGCTHYPMMQDAFQAALGADVKVFSQADLVADSLADYLQRRPEMV 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
SG P R Q
Sbjct: 237 GG--GTSKFLTSGDPKRVSDRATQFL 260
>gi|254562390|ref|YP_003069485.1| glutamate racemase [Methylobacterium extorquens DM4]
gi|254269668|emb|CAX25640.1| glutamate racemase [Methylobacterium extorquens DM4]
Length = 291
Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats.
Identities = 104/246 (42%), Positives = 148/246 (60%), Gaps = 2/246 (0%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ Q IL+FDSG+GGL VL+++R P+ ++Y ADD FPYG + L R++ +
Sbjct: 18 QNSQPVILVFDSGLGGLTVLEQVRRARPDAAYVYAADDAAFPYGALTEDRLVARVIAVME 77
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+L ++ P L VIACNTA TL+ LR F + F+G VP IK AAA T++ LIS+L+TP
Sbjct: 78 RLLLRHAPDLVVIACNTASTLVLPALRQRFVT-PFVGVVPPIKPAAALTRTRLISLLATP 136
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE-KE 188
T+ R YT +L+ ++ C + LV S LA E G + + I EI CF+E +
Sbjct: 137 GTVARAYTHDLVANFAGDCAVTLVGSKNLAGYAEAEMAGEPVTDAAILAEIAPCFVEGPD 196
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
G RTDV+ L+CTHYPL++ F +L+PWPV W+D + +IARR LL + H
Sbjct: 197 GARTDVVCLSCTHYPLLLPRFERLAPWPVTWIDPAPAIARRVIQLLGEMPAHALDAPPAC 256
Query: 249 ALFLSG 254
A+F G
Sbjct: 257 AVFTGG 262
>gi|88861400|ref|ZP_01136029.1| glutamate racemase [Pseudoalteromonas tunicata D2]
gi|88816575|gb|EAR26401.1| glutamate racemase [Pseudoalteromonas tunicata D2]
Length = 269
Score = 185 bits (469), Expect = 7e-45, Method: Composition-based stats.
Identities = 74/249 (29%), Positives = 127/249 (51%), Gaps = 10/249 (4%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
LQ I++FDSGIGG VL+ ++ P + Y+ D++ PYGN L++RL+
Sbjct: 3 SLQPHIVVFDSGIGGTTVLEHIQAAYPFAQYSYLMDNLFMPYGNLTIEVLQQRLLAKLKT 62
Query: 71 ILDKYQP-VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ +++ + VIACNTA T D LRS + + +G VPAIK A + +G + +L+TP
Sbjct: 63 VQEQFVKIDIIVIACNTASTQTLDFLRS-YTDIPIVGVVPAIKPACLQSSTGSVGLLATP 121
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ YT +LI+++ + +HL S L S E+ + D++ +E+E K
Sbjct: 122 GTIKNVYTQSLINAHSNNVKVHLYGSTRLVSLAEDKFWFGVVSIDDVAEELERL---KIE 178
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH- 248
+ D ++L CTH+P + QL + +D+ +IA R LL + ++
Sbjct: 179 QSIDHLILGCTHFPFLKSELAQLLSPSMKIIDSGAAIANRVSFLLSENGWVKDDAQNEVI 238
Query: 249 ----ALFLS 253
+ +
Sbjct: 239 KKPLRYYAT 247
>gi|218531473|ref|YP_002422289.1| glutamate racemase [Methylobacterium chloromethanicum CM4]
gi|218523776|gb|ACK84361.1| glutamate racemase [Methylobacterium chloromethanicum CM4]
Length = 286
Score = 185 bits (469), Expect = 8e-45, Method: Composition-based stats.
Identities = 103/246 (41%), Positives = 147/246 (59%), Gaps = 2/246 (0%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ Q IL+FDSG+GGL VL+++R P+ ++Y ADD FPYG + L R++ +
Sbjct: 13 QNSQPVILVFDSGLGGLTVLEQVRRARPDAAYVYAADDAAFPYGALTEERLVARVIAVME 72
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+L ++ P L VIACNTA TL+ LR F + F+G VP IK AAA T++ LIS+L+TP
Sbjct: 73 RLLLRHAPDLVVIACNTASTLVLPALRQRFVT-PFVGVVPPIKPAAALTRTRLISLLATP 131
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE-KE 188
T+ R YT +L+ ++ C + LV S LA E G + + I EI CF+E +
Sbjct: 132 GTVARAYTHDLVANFAGDCAVTLVGSKNLAGYAEAEMAGEPVSDAAILAEIAPCFVEGAD 191
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
G TDV+ L+CTHYPL++ F +L+PWPV W+D + +IARR LL + H
Sbjct: 192 GACTDVVCLSCTHYPLLLPRFERLAPWPVTWIDPAPAIARRVIQLLGEMPAHALDAPPAC 251
Query: 249 ALFLSG 254
A+F G
Sbjct: 252 AVFTGG 257
>gi|126462361|ref|YP_001043475.1| glutamate racemase [Rhodobacter sphaeroides ATCC 17029]
gi|189030365|sp|A3PK37|MURI_RHOS1 RecName: Full=Glutamate racemase
gi|126104025|gb|ABN76703.1| glutamate racemase [Rhodobacter sphaeroides ATCC 17029]
Length = 270
Score = 184 bits (468), Expect = 9e-45, Method: Composition-based stats.
Identities = 51/266 (19%), Positives = 99/266 (37%), Gaps = 19/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL VL ++ +PE F+Y D+ PYG + + ++ L
Sbjct: 2 AVGVFDSGLGGLTVLDAVQRRLPEVPFVYFGDNAHAPYGVRDADDIFHLTCA-ATERLWA 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQS-----------G 121
L ++ACNTA ++ T+ LG + +A Q
Sbjct: 61 EGCDLVILACNTASAAALKRMQETWIPKDKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + +E+ + E ++ +E
Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQPCGGVVDAIEQG--DEILAEALVRSHVE 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++ +L CTHYPL+ +F++ V ++ +A L R
Sbjct: 179 AL--KRRMPHPQAAILGCTHYPLMEPIFQEALGPEVSVYSQANLVAESLADYLARKPEFA 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ +G+P + Q
Sbjct: 237 GAGTES-KFLTTGEPRSVSNKATQFL 261
>gi|260663402|ref|ZP_05864293.1| glutamate racemase [Lactobacillus fermentum 28-3-CHN]
gi|260552254|gb|EEX25306.1| glutamate racemase [Lactobacillus fermentum 28-3-CHN]
Length = 268
Score = 184 bits (468), Expect = 9e-45, Method: Composition-based stats.
Identities = 47/255 (18%), Positives = 97/255 (38%), Gaps = 5/255 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I + DSG+GGL V++ ++ +P I+V D FPYG + +++ + + L
Sbjct: 3 NRPIGVMDSGLGGLSVVRVIQQKLPNEEVIFVGDQGHFPYGTKDQAEVRQLALSI-GAFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K+ + V+ACNTA L++ P P + A A + G I +++T AT
Sbjct: 62 LKHDVKMMVVACNTATAAALPALQAALPIPVIGVIEPGARAALAQDKKGPIGVIATTATT 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
I + ++ + VE + ++ + + +
Sbjct: 122 TAGAYPATIERLAPGTPVIAKATQPMVEIVEHGQTE----TAKAQEVVSEQLMTFKEHPV 177
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
+++ CTH+P + + V +D + A+ L + ++ L+
Sbjct: 178 KTLIMGCTHFPFLAPEISKAVGPTVALVDPAKETVATAKSWLEQHQAMGNHAHPNYHLYS 237
Query: 253 SGKPDIAMRRLMQGF 267
+G + +
Sbjct: 238 TGNLPDLRAGVNKWL 252
>gi|238760127|ref|ZP_04621275.1| Glutamate racemase [Yersinia aldovae ATCC 35236]
gi|238701625|gb|EEP94194.1| Glutamate racemase [Yersinia aldovae ATCC 35236]
Length = 241
Score = 184 bits (468), Expect = 9e-45, Method: Composition-based stats.
Identities = 71/238 (29%), Positives = 122/238 (51%), Gaps = 6/238 (2%)
Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95
+P+ H+IY D+V FPYG + +R++ + + + ++ + VIACNTA T+ L
Sbjct: 2 LPDLHYIYAFDNVAFPYGEKSGEFIIERVVEIVTAVQQRHPLAIVVIACNTASTVSLPAL 61
Query: 96 RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS 155
R F + +G VPAIK A T++G++ +L+T T+ +YT +LI + + C I L+ S
Sbjct: 62 RERF-AFPVVGVVPAIKPAVRLTRNGVVGLLATRGTVHASYTRDLIERFATDCKIELLGS 120
Query: 156 MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW 215
L E G + ++ +KK + +E D IVL CTH+PL+ Q+ P
Sbjct: 121 SELVELAETKLHGGVVPQEALKKILHPWLAMREPP--DTIVLGCTHFPLLTEELAQVLPE 178
Query: 216 PVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF--LSGKPDIAMRRLMQGFGLKS 271
+D+ +IARR L+ + ++ A L+ D + ++QG+G +
Sbjct: 179 GTRMVDSGAAIARRTAWLISSQENVVSSQDENIAYCMALNADTDALL-PVLQGYGFPT 235
>gi|146276946|ref|YP_001167105.1| glutamate racemase [Rhodobacter sphaeroides ATCC 17025]
gi|189030366|sp|A4WQY6|MURI_RHOS5 RecName: Full=Glutamate racemase
gi|145555187|gb|ABP69800.1| glutamate racemase [Rhodobacter sphaeroides ATCC 17025]
Length = 270
Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats.
Identities = 50/266 (18%), Positives = 98/266 (36%), Gaps = 19/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL VL ++ +PE F+Y D+ PYG + + ++ L
Sbjct: 2 AVGVFDSGLGGLTVLDAVQRRLPEVPFVYFGDNAHAPYGVRDADDIFALTCA-ATERLWA 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQS-----------G 121
L ++ACNTA ++ ++ LG + +A Q
Sbjct: 61 EGCDLVILACNTASAAALKRMQESWIPRDKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + +E+ + E ++ +E
Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQPCGGVVDAIEQG--DEILAEALVRSHVE 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++ +L CTHYPL+ F++ V ++ +A L R
Sbjct: 179 AL--KRRMPHPQAAILGCTHYPLMEATFQEALGPEVTVYSQANLVAESLADYLARRPEFV 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ + +G P + Q
Sbjct: 237 GQGTES-KFLTTGDPRSVSNKATQFL 261
>gi|315186198|gb|EFU19960.1| glutamate racemase [Spirochaeta thermophila DSM 6578]
Length = 286
Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats.
Identities = 79/259 (30%), Positives = 128/259 (49%), Gaps = 6/259 (2%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+L DSGIGG+ L + F+YVAD FPYG L+ L+ L + +L
Sbjct: 26 RPVLFLDSGIGGIPYLLWALNHIEGEEFVYVADRAHFPYGPRSHEELEAILVDLVAGLLR 85
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+++P L V+ACNTA + LR+ + ++ F+G VPAIK AA+ T++G++ +L+T TLR
Sbjct: 86 RFRPKLVVLACNTASVVGLPALRARY-AIPFVGVVPAIKPAASLTRTGVVGLLATERTLR 144
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
YT LI +Y + + V S + VE +E + + + D
Sbjct: 145 DFYTDELIATYANGARVVKVPSPHIVEFVEHRFIDA--SGEERRTAVREAVDRCVAQGAD 202
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
IVL CTH+ + R L+ V +D+ + + RR LL + + R + +L+
Sbjct: 203 TIVLGCTHFVFLEAQIRSLAGEHVQVIDSREGVGRRLGHLLSYLPCGR-RGPSTASFYLT 261
Query: 254 GK--PDIAMRRLMQGFGLK 270
G+ P+ R + +GL
Sbjct: 262 GRTPPEGRYLRFTRHYGLS 280
>gi|152991198|ref|YP_001356920.1| glutamate racemase [Nitratiruptor sp. SB155-2]
gi|166231046|sp|A6Q504|MURI_NITSB RecName: Full=Glutamate racemase
gi|151423059|dbj|BAF70563.1| glutamate racemase [Nitratiruptor sp. SB155-2]
Length = 253
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 47/254 (18%), Positives = 89/254 (35%), Gaps = 16/254 (6%)
Query: 17 LIFDSGIGGLIVLQKMRFL-MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+FDSG+GGL V++ + + + IY D PYG + + + + + + +
Sbjct: 4 GVFDSGVGGLTVVKSLLEHGLFDE-IIYFGDTARVPYGPKDKNTIIRYSLE-AQEFFKNF 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATLR 133
+ + ACN+ +ELRS P + I ++ T AT+
Sbjct: 62 DVDILITACNSVSAHAIEELRSNASFPVIGVIEPGVLALQNRGLDPKSQILVIGTQATIG 121
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
L+ + +I ++ + VEE + E ++ + D
Sbjct: 122 SGKYQKLLREHGYN-NILAKATPLFVPIVEEEIFEGPVLEATLQHYFDSL-------HPD 173
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
I+L CTH+PLI + + ++I + L + LF S
Sbjct: 174 AIILGCTHFPLIQDAIADYFNNEAVLIHSGEAIVEHLQKEL---GIKARKKTPSLKLFAS 230
Query: 254 GKPDIAMRRLMQGF 267
P+ +
Sbjct: 231 ENPEKLKKIAAHWL 244
>gi|295696096|ref|YP_003589334.1| glutamate racemase [Bacillus tusciae DSM 2912]
gi|295411698|gb|ADG06190.1| glutamate racemase [Bacillus tusciae DSM 2912]
Length = 285
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 59/252 (23%), Positives = 100/252 (39%), Gaps = 11/252 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I ++DSG+GGL VL MPE+ ++Y D + PYG+ ++ + L
Sbjct: 3 IGMYDSGVGGLTVLAAFVRHMPEHDYVYFGDTLHAPYGDRTAEEVRALSLAAV-KQLVAR 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L V+ACNT+ ++ D L + +P + L + A+ A + I++L+T T+
Sbjct: 62 NIDLLVVACNTSASVAVDALVNHYPDLPVLTLLDAVGPAVRHLPGRKIALLATRRTVEAG 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+HS + V++ L +E + ++ DV+
Sbjct: 122 VFEARLHSARPDAAVRSVAAPALVPLIERGVKDPAVYGPF----LDSYLKPLATWGADVL 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTHYPLI + P +D + +AR R + L SG
Sbjct: 178 VLGCTHYPLIADQIQSRVP-HTLLIDPATHLARHVAE--KRDAFPASSSAGSVTLLASGD 234
Query: 256 P---DIAMRRLM 264
D + +
Sbjct: 235 ATVLDAFWKSVS 246
>gi|161870616|ref|YP_001599789.1| glutamate racemase [Neisseria meningitidis 053442]
gi|161596169|gb|ABX73829.1| glutamate racemase [Neisseria meningitidis 053442]
gi|325198860|gb|ADY94316.1| glutamate racemase [Neisseria meningitidis G2136]
Length = 239
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 48/232 (20%), Positives = 90/232 (38%), Gaps = 8/232 (3%)
Query: 39 YHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRST 98
+ IY D PYG ++ M + L ++ VIACNT + ++R
Sbjct: 2 ENIIYFGDTARVPYGTKSKATIENFSMQIVD-FLLEHDVKAMVIACNTIAAVAGQKIRQK 60
Query: 99 FPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMI 157
+M L + A K A A T++ I I++T T+ + IH + ++ +
Sbjct: 61 TGNMPVLDVISAGAKAALATTRNNKIGIIATNTTVNSNAYARAIHRNNPDTLVRTQAAPL 120
Query: 158 LASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPV 217
L VE ++ + + + D +VL CTH+PL+ + + + V
Sbjct: 121 LVPLVE----EGWLEHEVTRLTVCEYLKPLLADGIDTLVLGCTHFPLLKPLIGREAH-NV 175
Query: 218 DWLDNSDSIARRARCLLPRINTHQT-RVFDDHALFLSGKPDIAMRRLMQGFG 268
+D++ + A +L + T D+ ++S P + G
Sbjct: 176 ALVDSAITTAEETARVLAQEGLLNTDNNNPDYRFYVSDIPLKFRTIGERFLG 227
>gi|315499265|ref|YP_004088069.1| glutamate racemase [Asticcacaulis excentricus CB 48]
gi|315417277|gb|ADU13918.1| Glutamate racemase [Asticcacaulis excentricus CB 48]
Length = 284
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 60/277 (21%), Positives = 99/277 (35%), Gaps = 26/277 (9%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I +FDSG+GGL + + + MP FIY+ D PYG + + L
Sbjct: 3 AIGVFDSGVGGLSIHRALVDRMPGADFIYLGDQKHAPYGERSGEEIVELTRQGCE-TLFN 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF----------PSMAFLGAVPAIKQA---------- 114
+ V+ CNTA + L+ST+ P VP I+ A
Sbjct: 62 AGASIVVLGCNTASAVALRRLQSTWLADYRKSIGRPVNVLGIIVPTIEAATGLPWEHEAE 121
Query: 115 ---AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
A ++ I T AT R I + + LA+ +E K+
Sbjct: 122 RRGAKIENVDVLGIFCTTATARSRVYEIEIDKRRQDLAVFTEPCIGLAAMIEAGESEEKL 181
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
+ + + G+ D +L CTHY +I +F+ P + S+A
Sbjct: 182 T--AVVESRVQALKTRIGRYPDRAILGCTHYEIIGELFKAALPEGTPLIHQPSSVANALE 239
Query: 232 CLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268
+ R + +HA +G P + + +G
Sbjct: 240 SYIARHPEYAIGTSANHAFLTTGVPGLQSEIVAAFWG 276
>gi|240139965|ref|YP_002964442.1| glutamate racemase [Methylobacterium extorquens AM1]
gi|240009939|gb|ACS41165.1| glutamate racemase [Methylobacterium extorquens AM1]
Length = 291
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 104/246 (42%), Positives = 148/246 (60%), Gaps = 2/246 (0%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ Q IL+FDSG+GGL VL+++R P+ ++Y ADD FPYG + L R++ +
Sbjct: 18 QNSQPVILVFDSGLGGLTVLEQVRRARPDAAYVYAADDAAFPYGALTEDRLVARVIAVME 77
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+L ++ P L VIACNTA TL+ LR F + F+G VP IK AAA T++ LIS+L+TP
Sbjct: 78 RLLLRHAPDLVVIACNTASTLVLPALRQRFVT-PFVGVVPPIKPAAALTRTRLISLLATP 136
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE-KE 188
T+ R YT +L+ ++ C + LV S LA E G + + I EI CF+E +
Sbjct: 137 GTVARAYTHDLVANFAGDCAVTLVGSKNLAGYAEAEMAGEPVSDAAILAEIAPCFVEGAD 196
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
G RTDV+ L+CTHYPL++ F +L+PWPV W+D + +IARR LL + H
Sbjct: 197 GARTDVVCLSCTHYPLLLPRFERLAPWPVTWIDPAPAIARRVIQLLGEMPAHALDAPPAC 256
Query: 249 ALFLSG 254
A+F G
Sbjct: 257 AVFTGG 262
>gi|149914761|ref|ZP_01903291.1| indolepyruvate ferredoxin oxidoreductase [Roseobacter sp. AzwK-3b]
gi|149811554|gb|EDM71389.1| indolepyruvate ferredoxin oxidoreductase [Roseobacter sp. AzwK-3b]
Length = 270
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 53/266 (19%), Positives = 100/266 (37%), Gaps = 19/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL + +P+ F+Y D+ PYG + + S L
Sbjct: 2 AVGIFDSGLGGLTVLDAVEKRLPDVPFVYFGDNAHAPYGVRDADDVYDLTTRAVSR-LWD 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFP--SMAFLGAVPAIKQAAAYTQS-----------G 121
L ++ACNTA ++ + LG + +A Q
Sbjct: 61 AGCDLVILACNTASAAALRRMQENWVPRDKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +EE + + E ++ ++
Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIGVDVEAQACGGVVDAIEEG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+++ + +L CTHYPL+ + F++ V ++ +A L R
Sbjct: 179 AL--KRKMPNPEAAILGCTHYPLMQNAFQEALGPDVQVYSQANLVAESLADYLTRHPAML 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ A +G P R Q
Sbjct: 237 GSGREA-AFLTTGDPKRVSSRATQFL 261
>gi|167648830|ref|YP_001686493.1| glutamate racemase [Caulobacter sp. K31]
gi|189030358|sp|B0T549|MURI_CAUSK RecName: Full=Glutamate racemase
gi|167351260|gb|ABZ73995.1| Glutamate racemase [Caulobacter sp. K31]
Length = 283
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 60/276 (21%), Positives = 93/276 (33%), Gaps = 26/276 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V + + +P+ FIY+AD PYG + L
Sbjct: 3 IGVFDSGVGGLTVHRALVNRLPQADFIYLADQANAPYGGRPGEEIVALTRAGCER-LFDA 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF----------PSMAFLGAVPAIKQAA---------- 115
L V+ACNTA + L+ T+ P VP I+ A
Sbjct: 62 GASLVVLACNTASAIALRRLQQTWLPGYRKALGRPINVLGIIVPTIEAATGLPWEHEAER 121
Query: 116 ---AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172
Q ++ + STP T I + LA +E A +++
Sbjct: 122 RGEKVEQLDILGVFSTPGTAASRVYEIEIDKRRQDVAVFSEPCPNLARMIEAGAGAVELA 181
Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232
+ + + + G+ D +L CTHY +I +FR P + S A
Sbjct: 182 TEVERHVQQ--LKTRIGRYPDRAILGCTHYEIIADLFRAALPAGTPLIHQPASTADALEL 239
Query: 233 LLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268
R +G P + +G
Sbjct: 240 YFQRHPELDPGTGGGRVFLTTGTPGPQNALVETFWG 275
>gi|163736577|ref|ZP_02143996.1| Glutamate racemase [Phaeobacter gallaeciensis BS107]
gi|161390447|gb|EDQ14797.1| Glutamate racemase [Phaeobacter gallaeciensis BS107]
Length = 269
Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 51/266 (19%), Positives = 97/266 (36%), Gaps = 20/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL ++ +P+ F+Y D+ PYG + + + D+
Sbjct: 2 AVGIFDSGLGGLTVLNAVQERLPDVDFLYYGDNAHAPYGVRDAEDIYQLTKAAVEDM-WS 60
Query: 75 YQPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQS-----------G 121
L V+ACNTA ++ LG + +A Q
Sbjct: 61 KGCNLVVLACNTASAAALRRMQENGLPEGKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +E+ + + E ++ ++
Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIGVDVEAQACGGVVDAIEDG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+++ +L CTHYPL+ +F+ V +A L R
Sbjct: 179 AL--KRKMPEPQAAILGCTHYPLMEEIFQAALGADVQVFSQGRLVADSLADYLERHPQMM 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ + +G P R Q
Sbjct: 237 GQGQGG--FYTTGVPARVSDRATQFL 260
>gi|238927873|ref|ZP_04659633.1| glutamate racemase [Selenomonas flueggei ATCC 43531]
gi|238884206|gb|EEQ47844.1| glutamate racemase [Selenomonas flueggei ATCC 43531]
Length = 262
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 62/250 (24%), Positives = 99/250 (39%), Gaps = 5/250 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL VL R ++P FI+ AD PYG A++ + F ++++
Sbjct: 3 IALFDSGYGGLTVLSHARRVLPSEEFIFYADRDHVPYGTKSVPAVRGFVRTAFRFLIEQQ 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA ++ DE+R + + +G PA+K+A + + +TP T+
Sbjct: 63 RADAVVVACNTATSVAVDEMRRLY-DVPIIGMEPAVKKALTRDADHRVLVTATPITVHGE 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
LI S + L++ L E ++ + F I
Sbjct: 122 KLKRLISSCDPNGLVDLLALPQLVEFAERQE----FVSSAVEAYLRDAFAPYRFADYSAI 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+ RQL P V +D ++ F SG+
Sbjct: 178 VLGCTHFNYFKDTMRQLLPQNVRLVDGNEGTVEELARRTGLRTQPIGAQTAHCTFFESGR 237
Query: 256 PDIAMRRLMQ 265
P + L
Sbjct: 238 PVVRAEELAH 247
>gi|84684746|ref|ZP_01012646.1| Glutamate racemase [Maritimibacter alkaliphilus HTCC2654]
gi|84667081|gb|EAQ13551.1| Glutamate racemase [Rhodobacterales bacterium HTCC2654]
Length = 270
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 51/266 (19%), Positives = 101/266 (37%), Gaps = 19/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL + +PE F+Y D+ PYG + + S L
Sbjct: 2 AVGIFDSGLGGLTVLDAVTKRLPEVPFVYFGDNAHTPYGVRDADDIYNLTTKAVSR-LWD 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQS-----------G 121
L ++ACNTA ++ ++ P LG + +A +
Sbjct: 61 EGCDLVILACNTASAAALRRMQESWIPPDKRVLGVFVPLIEALTERKWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +EE + + + ++ ++
Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEEG--DMILADALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+++ + +L CTHYP++ VF++ V + +A L R
Sbjct: 179 AL--KRKMPNPEAAILGCTHYPIMEDVFQEALGPEVTVYSQASLVAASLADYLERHPKMI 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ +GKP+ +
Sbjct: 237 GSGTES-KFLTTGKPEKVSAGATRFL 261
>gi|254463861|ref|ZP_05077272.1| glutamate racemase [Rhodobacterales bacterium Y4I]
gi|206684769|gb|EDZ45251.1| glutamate racemase [Rhodobacterales bacterium Y4I]
Length = 269
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 50/266 (18%), Positives = 95/266 (35%), Gaps = 20/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL + +P+ F+Y D+ PYG + + + D+
Sbjct: 2 AVGIFDSGLGGLTVLDAAQKRLPDVEFLYYGDNAHAPYGVRDAENIYQLTKAAMEDM-WD 60
Query: 75 YQPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQS-----------G 121
L ++ACNTA ++ LG + +A Q
Sbjct: 61 KGCDLVILACNTASAAALRRMQEGGLPQGKRVLGVFVPLIEALTERQWGDNSPPREVEVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +E+ + + E ++ ++
Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEDG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+++ + +L CTHYPL+ F+ V +A L R
Sbjct: 179 AL--KRKMPHPEAAILGCTHYPLMEQTFQAALGPEVKVFSQGSLVADSLADYLKRHPGML 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ +G P R Q
Sbjct: 237 GNGAGG--FYTTGNPGRVSDRATQFL 260
>gi|292669543|ref|ZP_06602969.1| glutamate racemase [Selenomonas noxia ATCC 43541]
gi|292648752|gb|EFF66724.1| glutamate racemase [Selenomonas noxia ATCC 43541]
Length = 262
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 61/250 (24%), Positives = 104/250 (41%), Gaps = 5/250 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGGL VL R ++P F++ AD PYG A++ + F ++++
Sbjct: 3 IALFDSGIGGLTVLSHARRVLPSEDFLFFADRDHVPYGTKSVPAVRGFVREAFHFLVEQQ 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA ++ DE+R + ++ +G PA+K+A + + +TP T+
Sbjct: 63 KADTVVVACNTATSVAVDEMRRLY-AVPIIGMEPAVKKALERDTERRVLVTATPITVNGE 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
LI +Y + I L++ L EE ++ + + I
Sbjct: 122 KLRRLISAYDTGGCIDLLALPRLVEFAEERE----FVSPRVENYLRSALAPYDLINYSAI 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+ RQ+ P V ++D ++ F SG+
Sbjct: 178 VLGCTHFNYFKDTLRQIMPQTVGFVDGNEGTVEELARRTNLRTVPAGERKAHCTFFESGR 237
Query: 256 PDIAMRRLMQ 265
L +
Sbjct: 238 LVEGAEALAR 247
>gi|163746582|ref|ZP_02153940.1| glutamate racemase, putative [Oceanibulbus indolifex HEL-45]
gi|161380467|gb|EDQ04878.1| glutamate racemase, putative [Oceanibulbus indolifex HEL-45]
Length = 269
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 54/266 (20%), Positives = 96/266 (36%), Gaps = 20/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL V K++ +PE F+Y+AD PYG + L
Sbjct: 2 AVGIFDSGLGGLTVWNKVQERLPEVDFVYLADSAHAPYGVRNADDIYNLTCAAVQR-LFD 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA---VPAIKQAAAYTQS----------G 121
L ++ACNTA ++ + VP I+
Sbjct: 61 AGCDLVILACNTASAAALRRMQEGWIPREKRVLGVFVPLIEAMTERQWGDNSPPREVAVN 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +EE + + E ++ ++
Sbjct: 121 HVALFATPATVASRAFQRELSFRAIGVDVEAQACGGVVDAIEEG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+++ D +L CTHYPL+ F+ V ++ +A L R
Sbjct: 179 AL--KRKMPNPDAAILGCTHYPLMQEAFQAALGAEVKVFSQAELVAASLADYLERHP--N 234
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ A +G P R Q
Sbjct: 235 MMGSGEAAFLTTGDPARVSDRATQFL 260
>gi|126737902|ref|ZP_01753632.1| glutamate racemase [Roseobacter sp. SK209-2-6]
gi|126721295|gb|EBA17999.1| glutamate racemase [Roseobacter sp. SK209-2-6]
Length = 269
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 51/266 (19%), Positives = 95/266 (35%), Gaps = 20/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL + +P+ F+Y AD PYG + + + +++
Sbjct: 2 AVGIFDSGLGGLTVLNAAQSRLPDVDFLYYADSARAPYGVRDAEDIYQLTKKAVAEM-WS 60
Query: 75 YQPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQS-----------G 121
L ++ACNTA ++ LG + +A Q
Sbjct: 61 KGCDLVILACNTASAAALRRMQEEGLPEGKRVLGVFVPLIEALTERQWGDNSPPREVEVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +E+ + + E ++ ++
Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIGVDVEAQACGGVVDAIEDG--DLILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+++ +L CTHYPL+ F+ V +A L R
Sbjct: 179 AL--KRKMPEPQAAILGCTHYPLMEQDFQAALGEGVKVFSQGALVADSLADYLERHPQML 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
F +G P R Q
Sbjct: 237 GSGTGG--YFTTGDPAKVSNRATQFL 260
>gi|163742776|ref|ZP_02150161.1| glutamate racemase [Phaeobacter gallaeciensis 2.10]
gi|161384031|gb|EDQ08415.1| glutamate racemase [Phaeobacter gallaeciensis 2.10]
Length = 269
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 51/266 (19%), Positives = 97/266 (36%), Gaps = 20/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL ++ +P+ F+Y D+ PYG + + + D+
Sbjct: 2 AVGIFDSGLGGLTVLNAVQERLPDVDFLYYGDNAHAPYGVRDAEDIYQLTKAAVEDM-WS 60
Query: 75 YQPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQS-----------G 121
L V+ACNTA ++ LG + +A Q
Sbjct: 61 KGCNLVVLACNTASAAALRRMQEDGLPEGKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +E+ + + E ++ ++
Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIGVDVEAQACGGVVDAIEDG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+++ +L CTHYPL+ +F+ V +A L R
Sbjct: 179 AL--KRKMPEPQAAILGCTHYPLMEEIFQAALGADVQVFSQGRLVADSLADYLERHPQMM 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ + +G P R Q
Sbjct: 237 GQGQGG--FYTTGVPARVSDRATQFL 260
>gi|251773011|gb|EES53567.1| glutamate racemase [Leptospirillum ferrodiazotrophum]
Length = 315
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 68/254 (26%), Positives = 115/254 (45%), Gaps = 8/254 (3%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+FDSG+GGL VL+ L PE F+Y+ D FPYG+ A+ + + +L +Y+
Sbjct: 49 ALFDSGMGGLSVLRHFLELFPEEDFLYLGDMARFPYGSKSREAICRFAVEDAG-LLSRYR 107
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRRT 135
PV V AC T + D L S FP + +G V A + A A T++G + +L T T+R
Sbjct: 108 PVTLVAACFTVSSQALDILVSRFPEIRVVGMVEAGARAALAMTRTGHVGVLGTEGTIRSG 167
Query: 136 YTSNLIHS-YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + ++ +S + A VEE +I E ++ + +E D
Sbjct: 168 AYPAIFQRLGGQETNVFGISCPLFAPMVEEGWIDGEIPERVAREYLAP-IVEGRTPDVDT 226
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
I+L CTHYP ++ + + + ++D +A + L R + + F++
Sbjct: 227 IILGCTHYPPLLPL-LRRILPHITFIDPGRELA---QAELLRSKPRTGQGKGHVSFFVTD 282
Query: 255 KPDIAMRRLMQGFG 268
+ MR G
Sbjct: 283 GRERFMRVGQHLLG 296
>gi|163852632|ref|YP_001640675.1| glutamate racemase [Methylobacterium extorquens PA1]
gi|163664237|gb|ABY31604.1| glutamate racemase [Methylobacterium extorquens PA1]
Length = 291
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 103/246 (41%), Positives = 147/246 (59%), Gaps = 2/246 (0%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ Q IL+FDSG+GGL VL+++R P+ ++Y ADD FPYG + L R++ +
Sbjct: 18 QNSQPVILVFDSGLGGLTVLEQVRRARPDAAYVYAADDAAFPYGALTEDRLVARVIAVME 77
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+L ++ P L VIACNTA TL+ LR F + F+G VP IK AAA T++ LIS+L+TP
Sbjct: 78 RLLLRHAPDLVVIACNTASTLVLPALRQRFVT-PFVGVVPPIKPAAALTRTRLISLLATP 136
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE-KE 188
T+ R YT +L+ ++ C + LV S LA E G + + I EI CF+E +
Sbjct: 137 GTVARAYTHDLVANFAGDCAVTLVGSKNLAGYAEAEMAGEPVSDAAILAEIAPCFVEGAD 196
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
G TDV+ L+CTHYPL++ F +L+PWPV W+D + +IARR LL + H
Sbjct: 197 GAYTDVVCLSCTHYPLLLPRFERLAPWPVTWIDPAPAIARRVIQLLGEMPAHALDAPPAC 256
Query: 249 ALFLSG 254
A+F G
Sbjct: 257 AVFTGG 262
>gi|103486695|ref|YP_616256.1| glutamate racemase [Sphingopyxis alaskensis RB2256]
gi|123253315|sp|Q1GTU9|MURI_SPHAL RecName: Full=Glutamate racemase
gi|98976772|gb|ABF52923.1| glutamate racemase [Sphingopyxis alaskensis RB2256]
Length = 268
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 82/243 (33%), Positives = 119/243 (48%), Gaps = 2/243 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
IL FDSG+GGL VL R L+P +Y AD G PYG + L R+ L ++
Sbjct: 7 DAPILFFDSGLGGLSVLGPTRALLPTAPIVYAADYAGLPYGRKSNEELAARVPALLGRLV 66
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++YQP L+VIACNTA T+ +R+ + +G VPAIK AA T+SG+I +L T AT+
Sbjct: 67 ERYQPRLAVIACNTASTIALGHVRAAL-DLPIVGTVPAIKPAAEMTKSGVIGVLGTEATV 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R+ Y +L + + S L + E G + + I + + G + G
Sbjct: 126 RQPYVDDLSARFAGGKTVLRHGSPGLVTGAEARLRGETVDPEVIARAVAGLRDQPRGDAI 185
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
DV+VLACTH+PL+ + V +D ++ IARR L A+F
Sbjct: 186 DVVVLACTHFPLLKDELQAGFGRGVALIDGAEGIARRIAH-LTDGQAWPAIAVPGIAVFT 244
Query: 253 SGK 255
Sbjct: 245 RSD 247
>gi|195953669|ref|YP_002121959.1| glutamate racemase [Hydrogenobaculum sp. Y04AAS1]
gi|229486240|sp|B4UA20|MURI_HYDS0 RecName: Full=Glutamate racemase
gi|195933281|gb|ACG57981.1| glutamate racemase [Hydrogenobaculum sp. Y04AAS1]
Length = 259
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 50/256 (19%), Positives = 96/256 (37%), Gaps = 13/256 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GGL VL+ +R + + +Y+ D PYG + + L
Sbjct: 2 KIGMFDSGVGGLTVLKSVRKVYDKVDIVYLGDTARVPYGIKSKETIITYAKESAN-FLIN 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ +IACN+ + L+ F ++ A +++ + I+ T AT+
Sbjct: 61 QNVDVILIACNSVSANAMEALQEMFDIPIVGVIEAGVEAALKSSKTKHVGIIGTSATINS 120
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + + + VEE I + ++ ++ K+ K D
Sbjct: 121 NKYQERLE--AFNIKTYAKACPLFVPIVEEKLINTDISKKAVEFYLKEF---KDLKDIDT 175
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
++L CTHYPL+ + P ++ + +SD+I N + L+ +
Sbjct: 176 LILGCTHYPLLEEDIKAFLP-HINLVSSSDAIISYI------NNIVKNEGNATTELYFTD 228
Query: 255 KPDIAMRRLMQGFGLK 270
+ G K
Sbjct: 229 ISQNTSELVEYIMGQK 244
>gi|260428076|ref|ZP_05782055.1| glutamate racemase [Citreicella sp. SE45]
gi|260422568|gb|EEX15819.1| glutamate racemase [Citreicella sp. SE45]
Length = 270
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 52/266 (19%), Positives = 97/266 (36%), Gaps = 19/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL VL + +PE F+Y AD PYG + + L
Sbjct: 2 AVGVFDSGLGGLTVLDAVSKRLPEVPFVYFADSAHAPYGVRDADDIYNLTTAAVDR-LWH 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA---VPAIKQAAAYTQS----------G 121
L ++ACNTA ++ T+ VP I+
Sbjct: 61 AGCDLVILACNTASAAALRRMQETWIPRDKRVLGVFVPLIEAMTERQWGDNSPPREVGVQ 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+R + + + L +EE + + E ++ ++
Sbjct: 121 HVALFATPATVRSRAFQRELAFRAIGVDVEAQACGGLVDAIEEG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+++ + +L CTHYPL+ +F++ V ++ +A L R
Sbjct: 179 AL--KRKMPEPEAAILGCTHYPLMEDIFQEALGPDVTVYSQANLVAESLADYLRRHPGML 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ +G P +
Sbjct: 237 GSGTES-RFLTTGDPRKVSGHATRFL 261
>gi|197103587|ref|YP_002128964.1| glutamate racemase [Phenylobacterium zucineum HLK1]
gi|229486245|sp|B4RCD6|MURI_PHEZH RecName: Full=Glutamate racemase
gi|196477007|gb|ACG76535.1| glutamate racemase [Phenylobacterium zucineum HLK1]
Length = 283
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 63/280 (22%), Positives = 101/280 (36%), Gaps = 32/280 (11%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I +FDSG+GGL V ++ P+ F+Y+AD PYG + + L +
Sbjct: 2 AIGVFDSGVGGLTVHHRLVERFPDADFVYLADQANAPYGGRPGEEIVELTKAGCIR-LFE 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLG----------AVPAIKQAA--------- 115
L V+ACNTA ++ L+ T+ VP I+ A
Sbjct: 61 AGCDLVVLACNTAASVALRRLQQTWLPGYRRETGRALNVLGIVVPTIEAATGLPWEHEAE 120
Query: 116 ----AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
+ ++ + STPAT R I + LA +E A
Sbjct: 121 RRGEKVEKLDILGVFSTPATARSRVYEIEIDKRRQDVAVFSEPCPELARMIEAGA----- 175
Query: 172 KEDEIKKEIEGCFIEKE---GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+E+K IEG G+ D +L CTHY ++ +FR+ P + ++ A
Sbjct: 176 PREELKAVIEGHVQALRTRIGRAPDRAILGCTHYEIVADLFREALPPGTPLIRQPEATAD 235
Query: 229 RARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268
L R +G+P + +G
Sbjct: 236 ALARYLDRHPEFDPGRSGLRRFLTTGEPGAQNSLVETFWG 275
>gi|163732003|ref|ZP_02139449.1| glutamate racemase, putative [Roseobacter litoralis Och 149]
gi|161394301|gb|EDQ18624.1| glutamate racemase, putative [Roseobacter litoralis Och 149]
Length = 269
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 52/265 (19%), Positives = 98/265 (36%), Gaps = 20/265 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ IFDSG+GGL VL ++ +P+ F Y+AD PYG + + L
Sbjct: 3 VGIFDSGLGGLTVLDAVQTRLPDVSFAYLADSAHAPYGVRTADDIYDLTCRSVAR-LFDT 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQS-----------GL 122
L ++ACNTA ++ ++ LG + +A Q
Sbjct: 62 GCNLVILACNTASAAALRRMQESWVPDDKRVLGVFVPLIEAMTERQWGDNSPPREVGVKH 121
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+++ +TPAT+ + + + + +E+ + + E ++ ++
Sbjct: 122 VALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEDG--DMMLAEALVRSHVDA 179
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+++ D +L CTHYPL+ +F++ V ++ +A L R
Sbjct: 180 L--QRKMPTPDAAILGCTHYPLMQDIFQKALGENVRVFSQANLVADSLADYLERHPKMHG 237
Query: 243 RVFDDHALFLSGKPDIAMRRLMQGF 267
+G P R Q
Sbjct: 238 TGSP--VFLTTGDPGRVSDRATQFL 260
>gi|110680409|ref|YP_683416.1| glutamate racemase, putative [Roseobacter denitrificans OCh 114]
gi|123172245|sp|Q163W3|MURI_ROSDO RecName: Full=Glutamate racemase
gi|109456525|gb|ABG32730.1| glutamate racemase, putative [Roseobacter denitrificans OCh 114]
Length = 269
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 53/265 (20%), Positives = 99/265 (37%), Gaps = 20/265 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ IFDSG+GGL VL ++ +P+ F Y+AD PYG + + L
Sbjct: 3 VGIFDSGLGGLTVLDAVQTRLPDMPFAYLADSAHAPYGVRTADDIYDLTCQSVAR-LFDA 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQS-----------GL 122
L ++ACNTA ++ ++ LG + +A Q
Sbjct: 62 GCNLVILACNTASAAALRRMQESWVPEDKRVLGVFVPLIEAMTERQWGDNSPPREVGVKH 121
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+++ +TPAT+ + + + + +E+ + + E ++ +E
Sbjct: 122 VALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEDG--DMMLAEALVRSHVEA 179
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+++ D +L CTHYPL+ +F++ V ++ +A L R +
Sbjct: 180 L--QRKMPTPDAAILGCTHYPLMQDIFQKALGENVRVFSQANLVADSLADYLERHPGMRG 237
Query: 243 RVFDDHALFLSGKPDIAMRRLMQGF 267
+G P R Q
Sbjct: 238 TGSP--VFLTTGDPARVSDRATQFL 260
>gi|320530742|ref|ZP_08031786.1| glutamate racemase [Selenomonas artemidis F0399]
gi|320137029|gb|EFW28967.1| glutamate racemase [Selenomonas artemidis F0399]
Length = 262
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 59/250 (23%), Positives = 105/250 (42%), Gaps = 5/250 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL R +P+ F++ AD PYG ++ + F ++++
Sbjct: 3 IALFDSGLGGLTVLGHARRALPDEEFLFFADRDHVPYGTKTVDEVRGFVRDAFRFLVEEE 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ VIACNTA ++ DE+R + + +G PA+K+A ++ + + TP T+R
Sbjct: 63 RAEAVVIACNTATSVSADEMRRRY-DIPIIGMEPAVKKALDADRTRRVLVTGTPITVRGE 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
LI +Y + + L+ L E +++ + + + I
Sbjct: 122 KLHRLIDTYDANHLVDLLPLPRLVEFAENQE----FVSPHVEEYLRTALAPFDFAQYSAI 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTH+ R L P + + D +D + F SG+
Sbjct: 178 VLGCTHFNFFKDTMRSLMPETMTFADGNDGTVEELARRAGLTTQPEGERTAHCTFFRSGR 237
Query: 256 PDIAMRRLMQ 265
+ + L +
Sbjct: 238 RVVGAQELAR 247
>gi|254510376|ref|ZP_05122443.1| glutamate racemase [Rhodobacteraceae bacterium KLH11]
gi|221534087|gb|EEE37075.1| glutamate racemase [Rhodobacteraceae bacterium KLH11]
Length = 269
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 54/266 (20%), Positives = 95/266 (35%), Gaps = 20/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL + +P+ F+Y AD PYG + + L
Sbjct: 2 AVGIFDSGLGGLTVLNAAQKRLPDVDFLYYADSAHAPYGVRDAEDIYNLTRAAV-QGLWD 60
Query: 75 YQPVLSVIACNTAFTLIKDELRS--TFPSMAFLGAVPAIKQAAAYTQS-----------G 121
L ++ACNTA ++ LG + +A Q
Sbjct: 61 RGCNLVILACNTASAAALRRMQEAGVPEGKRVLGVFVPLIEALTERQWGDNSPPREVEVQ 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +E+ + + E ++ ++
Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIGVDVEAQACGGVVDAIEDG--DMILAEALVRGHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+++ +L CTHYPL+ F+Q V D +A L R
Sbjct: 179 AL--KRKMPEPQAAILGCTHYPLMAETFQQALGPHVKVYSQGDLVAESLADYLQRHPNML 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+GKP + R Q
Sbjct: 237 GEGAGG--YLTTGKPGVVTDRATQFL 260
>gi|126735639|ref|ZP_01751384.1| glutamate racemase, putative [Roseobacter sp. CCS2]
gi|126714826|gb|EBA11692.1| glutamate racemase, putative [Roseobacter sp. CCS2]
Length = 270
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 53/266 (19%), Positives = 95/266 (35%), Gaps = 19/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL + +P+ +Y+ D PYG + L
Sbjct: 2 AVGIFDSGLGGLTVLDAVAKRLPDVPLVYMGDSAHAPYGVRTPDDIYDLTTKSTQR-LFD 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQS-----------G 121
L ++ACNTA ++ + LG + +A Q
Sbjct: 61 AGCDLVILACNTASAAALRRMQEAWVPDGKRVLGVFVPLIEALTERQWGDNSPPREVDTK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +EE + + E + ++
Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIGVDVEAQACGGVVDAIEEG--DMILAEALVSSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+++ D +L CTHYPL+ F++ V ++ +A L R
Sbjct: 179 AL--KRKMPEPDAAILGCTHYPLMAKEFQKALGAHVKVFSQAELVAESLADYLERRPEM- 235
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
D A +G P R Q
Sbjct: 236 VGPGTDSAFLTTGDPAQVSSRATQFL 261
>gi|209542243|ref|YP_002274472.1| glutamate racemase [Gluconacetobacter diazotrophicus PAl 5]
gi|209529920|gb|ACI49857.1| glutamate racemase [Gluconacetobacter diazotrophicus PAl 5]
Length = 272
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 80/227 (35%), Positives = 121/227 (53%), Gaps = 1/227 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL FDSGIGG +++ +R +P Y+AD+ +PYG D L +R++ L
Sbjct: 1 MARRILAFDSGIGGFGIVRALRTRLPGVSLDYLADNAVYPYGEQPDTDLIRRIVALIGQA 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+D P L VIACNTA TL LR + ++ F+G VP IK AA +++ I +L+T AT
Sbjct: 61 IDALDPDLVVIACNTASTLALPALRERY-ALPFVGCVPPIKWAAELSRTRTIGLLATRAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+RR Y +L Y C + + LA E G I D I +E++ F + G
Sbjct: 120 VRRPYLGDLQRRYAPDCTLLAHGARGLADLAECAFRGHAIATDAIDRELDALFGQPGGAA 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
DV+ + CTHY ++ R SP WLD ++++AR+A +L +
Sbjct: 180 IDVVGIGCTHYTFLMDRLRAASPPGTIWLDPAEAVARQAATVLGPLG 226
>gi|260433846|ref|ZP_05787817.1| glutamate racemase [Silicibacter lacuscaerulensis ITI-1157]
gi|260417674|gb|EEX10933.1| glutamate racemase [Silicibacter lacuscaerulensis ITI-1157]
Length = 269
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 55/267 (20%), Positives = 94/267 (35%), Gaps = 22/267 (8%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL + +P+ F+Y AD PYG + + D L
Sbjct: 2 AVGIFDSGLGGLTVLNAAQTRLPDVDFLYYADSAHAPYGVRDAEDIYNLTRNAVQD-LWS 60
Query: 75 YQPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQS-----------G 121
L ++ACNTA ++ LG + +A Q
Sbjct: 61 RGCDLVILACNTASAAALRRMQEEGVPQGKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +EE + + E ++ ++
Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEEG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI-NTH 240
+++ +L CTHYPL+ F+ V D +A L R
Sbjct: 179 AL--KRKMPHPQAAILGCTHYPLMAEAFQAALGPDVQVFSQGDLVAESLADYLQRHPGML 236
Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQGF 267
T +G P R Q
Sbjct: 237 GTGEAG---FLTTGDPKKVSDRATQFL 260
>gi|114327536|ref|YP_744693.1| glutamate racemase [Granulibacter bethesdensis CGDNIH1]
gi|122327492|sp|Q0BTT2|MURI_GRABC RecName: Full=Glutamate racemase
gi|114315710|gb|ABI61770.1| glutamate racemase [Granulibacter bethesdensis CGDNIH1]
Length = 276
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 88/269 (32%), Positives = 133/269 (49%), Gaps = 12/269 (4%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+K IL+FDSGIGGL V +R ++P YVAD GFPYG D AL R++ +
Sbjct: 1 MRKTDAHILVFDSGIGGLGVADCIRRMLPAATLGYVADTAGFPYGAMSDEALVTRVLTVL 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ + +P + VIACNTA TL LRS + F+G VP +K AA+ + + I +L+T
Sbjct: 61 EQAIARLRPDMVVIACNTASTLALSALRSRH-DLPFIGCVPPLKWAASVSATRQIGLLAT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
PAT+ R Y + L+ + C +H + LA E G + + ++ E+ I
Sbjct: 120 PATVDRPYLTALMQEHGQGCTLHAHGARHLAGYAEAVFRGETVLVEAVRAELG---ILGM 176
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR-------INTHQ 241
D + L CTHY ++ RQ P PV WLD ++++AR+A + + +
Sbjct: 177 IPDIDAVALGCTHYGRLLPWLRQAMPRPVAWLDPAEAVARQAARIAITAAATAAPDSLPR 236
Query: 242 TRVFDDHALFLSGK-PDIAMRRLMQGFGL 269
+F +G PD A R+ G
Sbjct: 237 AAPCWAQTVFTTGAVPDEATRQAWAAEGF 265
>gi|297587459|ref|ZP_06946103.1| possible glutamate racemase [Finegoldia magna ATCC 53516]
gi|297574148|gb|EFH92868.1| possible glutamate racemase [Finegoldia magna ATCC 53516]
Length = 261
Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 61/268 (22%), Positives = 110/268 (41%), Gaps = 17/268 (6%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M + P K I DSG+GGL V +K++ LMP+ +IY AD PYG+ +
Sbjct: 1 MYLKQKPYNK-----IGFVDSGLGGLTVFKKVKKLMPDKEYIYFADSANVPYGSKTRDQM 55
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+ ++ Q L V+ACNT ++ D ++S +K A T +
Sbjct: 56 L-MISENIVRFFNEQQIDLLVVACNTLTSIALDYMKSIANFDIIGVVEYGVKSAIKTTSN 114
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+ +++T AT+ L+ + + S VEE +D+I +++
Sbjct: 115 KKVGVIATKATVDNGLYKKLLEQQGV--EVCQSACFDFVSFVEEDCK----DKDKILEKV 168
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
E D I+L CTHYP+++ +Q + + ++D +DS++ +
Sbjct: 169 EEYLKPIVDFGADTIILGCTHYPILIEYLKQYTGENITFVDPADSLSEDVFEI-----CG 223
Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQGFG 268
+ D F++ P + G
Sbjct: 224 NYQNKCDTKYFVTKNPSDFKINGSKIIG 251
>gi|148556725|ref|YP_001264307.1| glutamate racemase [Sphingomonas wittichii RW1]
gi|148501915|gb|ABQ70169.1| glutamate racemase [Sphingomonas wittichii RW1]
Length = 264
Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 78/236 (33%), Positives = 122/236 (51%), Gaps = 1/236 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
IL+FDSG+GGL VL R L+P+ ++YVAD+ GFPYG + + R+ L ++
Sbjct: 4 DRPILMFDSGVGGLSVLAPTRALLPQASYVYVADNGGFPYGIRSEAEIAARVPALLGRLV 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++Y+P L VIACNTA T+ +R+ + +G VPAIK AA + + I +L T AT+
Sbjct: 64 ERYRPRLVVIACNTASTIALAAVRAAL-DLPIVGTVPAIKPAAERSAARAIGVLGTDATV 122
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R+ Y +L + + C + S L E G + + ++G + G R
Sbjct: 123 RQPYVDDLSARFAADCLVLRHGSARLVELAEAKLRGEPTDPADYRAVLDGLLGQPGGDRI 182
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
D++VLACTH+PL+ +P P+ ++D IARR L + +
Sbjct: 183 DMVVLACTHFPLVEAELAAAAPRPLRFVDGGPGIARRVAHLTEGQDWPAAPKGEAV 238
>gi|332185464|ref|ZP_08387212.1| glutamate racemase [Sphingomonas sp. S17]
gi|332014442|gb|EGI56499.1| glutamate racemase [Sphingomonas sp. S17]
Length = 286
Score = 182 bits (463), Expect = 4e-44, Method: Composition-based stats.
Identities = 85/265 (32%), Positives = 127/265 (47%), Gaps = 1/265 (0%)
Query: 5 NYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRL 64
Y IL FDSG+GGL + R +P F+YVAD GFPYG + + R+
Sbjct: 17 AYEAAMSDPRPILFFDSGVGGLSIAGPARMALPTAPFVYVADSAGFPYGEKSEAEIAGRV 76
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
L + ++Y+P L VIACNTA T+ +R+ + +G VPAIK AA +++ I
Sbjct: 77 PALLGRLAERYRPRLIVIACNTASTIALPAVRAAL-DLPVVGTVPAIKPAALMSETRTIG 135
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+L T AT+R+ Y +L + S C + S L E G + + ++G F
Sbjct: 136 VLGTRATVRQAYVDDLAARFASDCRVIRHGSAALVELAEAKLRGETLSSESFTAVLDGLF 195
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
++ G+ DVIV ACTH+PL+ +P PV ++D IARR L + R
Sbjct: 196 GQEGGEAIDVIVNACTHFPLVEAELAAAAPHPVRFVDGGPGIARRIAFLTQGQDWPADRG 255
Query: 245 FDDHALFLSGKPDIAMRRLMQGFGL 269
G+ + A+R + G
Sbjct: 256 EGVAVFTHLGEREAALRPGLALRGF 280
>gi|4511996|gb|AAD21556.1| glutamate racemase [Zymomonas mobilis subsp. mobilis ZM4]
Length = 224
Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats.
Identities = 77/209 (36%), Positives = 114/209 (54%), Gaps = 1/209 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ IL F+SG+GGL VL ++ +PE +YVAD+ GFPYG + + R+ L +
Sbjct: 1 MSRPILFFNSGVGGLSVLAAVKKALPEAPILYVADNGGFPYGTKSEEEIATRVPALLGRL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+++Y P L VIACNTA T+ +RS + +G VPAIK AA ++S + +L T AT
Sbjct: 61 VERYDPALLVIACNTASTIALPFIRSAL-QIPVVGTVPAIKPAALLSKSHVFGVLGTEAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R+ Y +L + S C + S L + E G K + E++ + EG R
Sbjct: 120 IRQPYVDHLSEEFASDCTVIRQGSANLVTLAEAKLRGEKSDLALYRAELDRLLQQPEGDR 179
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWL 220
DV+VLACTH+PL+ +SP P L
Sbjct: 180 IDVVVLACTHFPLVKEELEAVSPAPCYLL 208
>gi|305432470|ref|ZP_07401632.1| glutamate racemase [Campylobacter coli JV20]
gi|304444509|gb|EFM37160.1| glutamate racemase [Campylobacter coli JV20]
Length = 253
Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats.
Identities = 53/263 (20%), Positives = 98/263 (37%), Gaps = 15/263 (5%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ ++ I +FDSG+GGL VL+ + IY D PYG + + K +
Sbjct: 3 EDIKMKIGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIVKFCLEALD 62
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA---AAYTQSGLISIL 126
K+ + +IACNTA D LR G + A +A A ++ I ++
Sbjct: 63 FF-SKFNIDMLIIACNTASAYALDALR-LKADFPIYGVIDAGVEATKKALLDKNKKILVI 120
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T AT++ N + ++ +++ + VEE ++ + ++ +G
Sbjct: 121 ATKATIQSKEYQNRLQKQGFN-NVDALATGLFVPMVEEGIFEGELLQSAMRYYFKGIETP 179
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
D ++LACTH+PL+ + + + D+I + R
Sbjct: 180 ------DALILACTHFPLLANSLSVYFGSKTKLIHSGDAIVEFLK---QRQKLLLKEEKA 230
Query: 247 DHALFLSGKPDIAMRRLMQGFGL 269
+ S L
Sbjct: 231 KLHFYASSDVKSLENTAKIWLNL 253
>gi|302338969|ref|YP_003804175.1| glutamate racemase [Spirochaeta smaragdinae DSM 11293]
gi|301636154|gb|ADK81581.1| glutamate racemase [Spirochaeta smaragdinae DSM 11293]
Length = 261
Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats.
Identities = 69/245 (28%), Positives = 112/245 (45%), Gaps = 7/245 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K I FDSGIGGL LQ +R +P + + Y+AD FPYG L ++
Sbjct: 1 MKNTGPIAFFDSGIGGLPYLQWVRKKLPNFSYRYLADRANFPYGEKSIEELGGLIIGSME 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+++ P + V+ACNTA +LR TF S+ F+G VPAIK AAA + + I +L+T
Sbjct: 61 RYIERVDPSIVVVACNTASVTALQKLRDTF-SVPFVGVVPAIKPAAALSCTHTIGLLATK 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ YT NL+ + + + + + VE + + EI++ +
Sbjct: 120 RTVEDPYTDNLVRLFADGFQVERFAGVDIVDFVENHLLDAEPH--EIREVLAPAVAFFSE 177
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
K D +VL CTH+ + + V +D+ + + R ++ +
Sbjct: 178 KEVDTLVLGCTHFLHVRDEIAEAFGGRVKIVDSIEGVGRHVIQMVSEYH----GGGGGGE 233
Query: 250 LFLSG 254
F+SG
Sbjct: 234 FFVSG 238
>gi|238785771|ref|ZP_04629743.1| Glutamate racemase [Yersinia bercovieri ATCC 43970]
gi|238713305|gb|EEQ05345.1| Glutamate racemase [Yersinia bercovieri ATCC 43970]
Length = 241
Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats.
Identities = 71/237 (29%), Positives = 123/237 (51%), Gaps = 4/237 (1%)
Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95
+P+ H+IY D+V FPYG + +R++ + + + ++ + VIACNTA T+ L
Sbjct: 2 LPDLHYIYAFDNVAFPYGEKSGEFIVERVLEIVTAVQQRHPLAIVVIACNTASTVSLPAL 61
Query: 96 RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS 155
R F + +G VPAIK A T++G++ +L+T T+ +YT +LI + + C I L+ S
Sbjct: 62 RERF-AFPVVGVVPAIKPAVRLTRNGVVGLLATRGTVHASYTLDLIARFATDCKIELLGS 120
Query: 156 MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW 215
L E G + + +KK + +E D IVL CTH+PL+ Q+ P
Sbjct: 121 SELVELAESKLHGGVVSVEALKKILHPWLAMREPP--DTIVLGCTHFPLLAEELAQVLPE 178
Query: 216 PVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDI-AMRRLMQGFGLKS 271
+D+ +IARR L+ + ++ A ++ D A+ ++QG+G ++
Sbjct: 179 GTRMVDSGAAIARRTAWLISSQENVVSSQDENMAYCMALNTDTDALLPVLQGYGFQT 235
>gi|86149468|ref|ZP_01067699.1| glutamate racemase [Campylobacter jejuni subsp. jejuni CF93-6]
gi|88596590|ref|ZP_01099827.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 84-25]
gi|218563241|ref|YP_002345021.1| glutamate racemase [Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|11386947|sp|Q9PM24|MURI_CAMJE RecName: Full=Glutamate racemase
gi|85840250|gb|EAQ57508.1| glutamate racemase [Campylobacter jejuni subsp. jejuni CF93-6]
gi|88191431|gb|EAQ95403.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 84-25]
gi|112360948|emb|CAL35749.1| glutamate racemase [Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|284926846|gb|ADC29198.1| glutamate racemase [Campylobacter jejuni subsp. jejuni IA3902]
gi|315927597|gb|EFV06928.1| glutamate racemase [Campylobacter jejuni subsp. jejuni DFVF1099]
gi|315929474|gb|EFV08670.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 305]
Length = 250
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 54/258 (20%), Positives = 99/258 (38%), Gaps = 15/258 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GGL VL+ + IY D PYG + + K + ++
Sbjct: 2 KIGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEALDFF-EQ 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA---AAYTQSGLISILSTPAT 131
+Q + +IACNTA D LR+ G + A +A A + ++ I +++T AT
Sbjct: 61 FQIDMLIIACNTASAYALDALRA-KAHFPVYGVIDAGVEATIKALHDKNKEILVIATKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + S +I+ +++ + VEE + ++ +
Sbjct: 120 IKSEEYQKRLLSQGY-TNINALATGLFVPMVEEGIFEGDFLQSAMEYYFKNITTP----- 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++LACTH+PL+ + + + D+I + R N +
Sbjct: 174 -DALILACTHFPLLGRSLSKYFGDKTKLIHSGDAIVEFLK---ERENIDLKNHKAKLHFY 229
Query: 252 LSGKPDIAMRRLMQGFGL 269
S + L
Sbjct: 230 ASSDVESLKNTAKIWLNL 247
>gi|83942612|ref|ZP_00955073.1| glutamate racemase [Sulfitobacter sp. EE-36]
gi|83953853|ref|ZP_00962574.1| glutamate racemase [Sulfitobacter sp. NAS-14.1]
gi|83841798|gb|EAP80967.1| glutamate racemase [Sulfitobacter sp. NAS-14.1]
gi|83846705|gb|EAP84581.1| glutamate racemase [Sulfitobacter sp. EE-36]
Length = 269
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 51/266 (19%), Positives = 97/266 (36%), Gaps = 20/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL V ++ +P+ F+Y+AD PYG + + L
Sbjct: 2 AVGIFDSGLGGLTVWDAVQAQLPDVDFVYLADSAHAPYGVRNADDIYNLTTA-ATQRLFD 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQS-----------G 121
L ++ACNTA ++ + LG + +A Q
Sbjct: 61 AGCDLVILACNTASAAALRRMQEGWIPSDKRVLGVFVPLIEAMTERQWGDNSPPREVDLK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +E+ + E ++ ++
Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEDG--DFILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+++ + +L CTHYPL+ F+ V ++ +A L R
Sbjct: 179 AL--KRKMPAPEAAILGCTHYPLMQETFQDALGPDVKVFSQANLVAHSLSDYLKRHP--N 234
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ A +G P R Q
Sbjct: 235 MLGTGEAAFLTTGDPKKVSSRATQFL 260
>gi|16127933|ref|NP_422497.1| glutamate racemase [Caulobacter crescentus CB15]
gi|221236753|ref|YP_002519190.1| glutamate racemase [Caulobacter crescentus NA1000]
gi|13425469|gb|AAK25665.1| glutamate racemase, putative [Caulobacter crescentus CB15]
gi|220965926|gb|ACL97282.1| glutamate racemase [Caulobacter crescentus NA1000]
Length = 289
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 59/276 (21%), Positives = 97/276 (35%), Gaps = 26/276 (9%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V + + +P+ F Y+AD PYG + + L +
Sbjct: 9 IGVFDSGVGGLSVHRALVQRLPQADFTYLADQANAPYGVRSGEDIVELTKAGCIR-LFER 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTF----------PSMAFLGAVPAIKQAAAYTQSG---- 121
L V+ACNTA + L+ T+ P VP I++A
Sbjct: 68 GASLVVLACNTASAIALRRLQQTWLPDYRKDIGRPVNILGIIVPTIEKATGLPWEHEAER 127
Query: 122 ---------LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172
++ + +T AT+R I + + L +E A ++I
Sbjct: 128 RGEMVQALDILGVFATQATVRSRVYEIEIDKRKQDLAVFSEACPELVPLIEGDASVVEIA 187
Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232
+ + G+ D +VL CTHY +I +FR P + + A
Sbjct: 188 KAVEGHV--QALKTRIGRYPDRVVLGCTHYEIIADIFRAALPAGTPLIQQPAATAEGLAL 245
Query: 233 LLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268
L R + +G P + +G
Sbjct: 246 YLERHPEYDVGAGGGRVFLTTGTPGPQNGLVQSFWG 281
>gi|148925791|ref|ZP_01809479.1| glutamate racemase [Campylobacter jejuni subsp. jejuni CG8486]
gi|145845801|gb|EDK22892.1| glutamate racemase [Campylobacter jejuni subsp. jejuni CG8486]
Length = 247
Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats.
Identities = 54/258 (20%), Positives = 99/258 (38%), Gaps = 15/258 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GGL VL+ + IY D PYG + + K + ++
Sbjct: 2 KIGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEALDFF-EQ 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA---AAYTQSGLISILSTPAT 131
+Q + +IACNTA D LR+ G + A +A A + ++ I +++T AT
Sbjct: 61 FQIDMLIIACNTASAYALDALRA-KAHFPVYGVIDAGVEATIKALHDKNKEILVIATKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + S +I+ +++ + VEE + ++ +
Sbjct: 120 IKSEEYQKRLLSQGY-TNINALATGLFVPMVEEGIFEGDFLQSAMEYYFKNITTP----- 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++LACTH+PL+ + + + D+I + R N +
Sbjct: 174 -DALILACTHFPLLGRSLSKYFGDKTKLIHSGDAIVEFLK---ERENIDLKNHKAKLHFY 229
Query: 252 LSGKPDIAMRRLMQGFGL 269
S + L
Sbjct: 230 ASSDVESLKNTAKIWLNL 247
>gi|157413034|ref|YP_001483900.1| glutamate racemase [Prochlorococcus marinus str. MIT 9215]
gi|157387609|gb|ABV50314.1| Glutamate racemase [Prochlorococcus marinus str. MIT 9215]
Length = 264
Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats.
Identities = 53/261 (20%), Positives = 105/261 (40%), Gaps = 11/261 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ + IFDSGIGG +L + + Y+AD P+G ++ + +
Sbjct: 1 MNLKVGIFDSGIGGFTILNSLLKTRKDIEVFYLADTKRIPFGGKNFVEIRLIAKEICNFF 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+DK ++ACNT D + + F I + +I +L+T T
Sbjct: 61 VDK-NLDALLVACNTTNACALDIMENNLKVPCF----DLINSVSGIVDKQIIGVLATQTT 115
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R +Y N I+S I S +E+ K+ D++ + K
Sbjct: 116 VRSSYYKNAINSKKENTIIFQQECPEFVSEIEK----EKLNLDKLNYLSDLYLRPLINKN 171
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL--LPRINTHQTRVFDDHA 249
+ ++L C+HYPLI R+ + +D S ++ ++ +P+ ++ +++
Sbjct: 172 IEELILGCSHYPLIYDFLRKKLDSNITIIDPSVALIKKFNQFFDIPKTACYEGLSYENVE 231
Query: 250 LFLSGKPDIAMRRLMQGFGLK 270
F++ K D ++ G+
Sbjct: 232 FFVTSKRDEFSSKVKFWLGIN 252
>gi|259502881|ref|ZP_05745783.1| glutamate racemase [Lactobacillus antri DSM 16041]
gi|259169132|gb|EEW53627.1| glutamate racemase [Lactobacillus antri DSM 16041]
Length = 257
Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats.
Identities = 48/249 (19%), Positives = 95/249 (38%), Gaps = 7/249 (2%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSG+GGL VL+ +R +P+ ++V D FPYG +++ + + L ++
Sbjct: 1 MDSGLGGLSVLRVLRQELPDESLLFVGDQGHFPYGTKTQAEVRQLALAI-GRFLVRHDAK 59
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138
L V+ACNTA L + +G + AA T I ++ T +T++
Sbjct: 60 LMVVACNTATGAALPAL-QAALPIPVVGVIRPGATAALATNPRTIGVIGTDSTIKNGAYE 118
Query: 139 NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198
+H + + L + VE G ++ ++ + + ++L
Sbjct: 119 RTLHELQPAVKVVSQPAQPLVAIVEHGQTG----TPAAQRAVDKVLQPFASQPVENLILG 174
Query: 199 CTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDI 258
CTH+P + + V +D + + + +L T L+ +G+
Sbjct: 175 CTHFPFLSKEIQHKLGPAVRLIDPAYETVQTVKQVLAARQLAATGGQQTV-LYTTGRVAD 233
Query: 259 AMRRLMQGF 267
+
Sbjct: 234 LQTGADRLL 242
>gi|157415872|ref|YP_001483128.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 81116]
gi|157386836|gb|ABV53151.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 81116]
gi|307748509|gb|ADN91779.1| Glutamate racemase [Campylobacter jejuni subsp. jejuni M1]
gi|315931379|gb|EFV10348.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 327]
Length = 247
Score = 182 bits (461), Expect = 7e-44, Method: Composition-based stats.
Identities = 54/258 (20%), Positives = 99/258 (38%), Gaps = 15/258 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GGL VL+ + IY D PYG + + K + ++
Sbjct: 2 KIGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEALEFF-EQ 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA---AAYTQSGLISILSTPAT 131
+Q + +IACNTA D LR+ G + A +A A + ++ I +++T AT
Sbjct: 61 FQIDMLIIACNTASAYALDALRA-KAHFPVYGVIDAGVEATIKALHDKNKEILVIATKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + S +I+ +++ + VEE + ++ +
Sbjct: 120 IKSEEYQKRLLSQGY-TNINALATGLFVPMVEEGIFEGDFLQSAMEYYFKNITTP----- 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++LACTH+PL+ + + + D+I + R N +
Sbjct: 174 -DALILACTHFPLLGRSLSKYFGDKTKLIHSGDAIVEFLK---ERENIDLKNHKAKLHFY 229
Query: 252 LSGKPDIAMRRLMQGFGL 269
S + L
Sbjct: 230 ASSDVESLKNTAKIWLNL 247
>gi|57168788|ref|ZP_00367919.1| glutamate racemase [Campylobacter coli RM2228]
gi|57019835|gb|EAL56518.1| glutamate racemase [Campylobacter coli RM2228]
Length = 247
Score = 181 bits (460), Expect = 8e-44, Method: Composition-based stats.
Identities = 53/258 (20%), Positives = 95/258 (36%), Gaps = 15/258 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GGL VL+ + IY D PYG + + K + K
Sbjct: 2 KIGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIVKFCLEALDFF-SK 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA---AAYTQSGLISILSTPAT 131
+ + +IACNTA D LR G + A +A A ++ I +++T AT
Sbjct: 61 FNIDMLIIACNTASAYALDALR-LKADFPIYGVIDAGVEATKKALLDKNKKILVIATKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + VEE ++ + ++ +G
Sbjct: 120 IQSKEYQNRLQKQGFN-NVDALATGLFVPMVEEGIFEGELLQSAMRYYFKGIETP----- 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++LACTH+PL+ + + + D+I + R +
Sbjct: 174 -DALILACTHFPLLANSLSVYFGSKTKLIHSGDAIVEFLK---QRQKLLLKEEKAKLHFY 229
Query: 252 LSGKPDIAMRRLMQGFGL 269
S L
Sbjct: 230 ASSDVKSLENTAKIWLNL 247
>gi|297568262|ref|YP_003689606.1| glutamate racemase [Desulfurivibrio alkaliphilus AHT2]
gi|296924177|gb|ADH84987.1| glutamate racemase [Desulfurivibrio alkaliphilus AHT2]
Length = 267
Score = 181 bits (460), Expect = 8e-44, Method: Composition-based stats.
Identities = 61/259 (23%), Positives = 114/259 (44%), Gaps = 9/259 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ V + + +P+Y +Y D PYG+ + + +L +
Sbjct: 2 IGVFDSGVGGMTVARAIEQALPDYRLVYFGDLARTPYGSKSSDTISRYSCQNVDFLLSR- 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACN+A ++ LR+ + F PA+ QAA ++ G + ++ T AT+R
Sbjct: 61 GAKIIVVACNSAASVAAANLRAAYDLPIFEVIGPAVAQAARFSSRGRVGVIGTRATIRSG 120
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L+ + C + + +L VE + + E K + + ++ D +
Sbjct: 121 VYEQLLQQQNAGCRVFSAACPLLVPLVE----EGWLDKRETKMILRRYLAPLKQQQVDTL 176
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN----THQTRVFDDHALF 251
VL CTHYPL+ + ++ V +D+S ++A L T R ++ +
Sbjct: 177 VLGCTHYPLLKELIQRRIGRRVRVIDSSQALAAELAAFLNANPAVATTLSRREEGENLYY 236
Query: 252 LSGKPDIAMRRLMQGFGLK 270
+S + A + FG
Sbjct: 237 VSDVTEAAHHTARRIFGRS 255
>gi|238794886|ref|ZP_04638485.1| Glutamate racemase [Yersinia intermedia ATCC 29909]
gi|238725761|gb|EEQ17316.1| Glutamate racemase [Yersinia intermedia ATCC 29909]
Length = 241
Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats.
Identities = 72/236 (30%), Positives = 122/236 (51%), Gaps = 6/236 (2%)
Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95
+P+ H+IY D+V FPYG + +R++ + + + ++ + VIACNTA T++ L
Sbjct: 2 LPDLHYIYAFDNVAFPYGEKSGEFIIERVLEIVTAVQQRHPLAIVVIACNTASTVVLPAL 61
Query: 96 RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS 155
R F + +G VPAIK A T++G++ +L+T T+ +YT +LI + + C I L+ S
Sbjct: 62 RERF-AFPVVGVVPAIKPAVRLTRNGVVGLLATRGTVHASYTRDLIERFATDCKIELLGS 120
Query: 156 MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW 215
L E G + + +KK + +E D IVL CTH+PL+V Q+ P
Sbjct: 121 SELVELAESKLHGGAVPIETLKKILHPWLAMREPP--DTIVLGCTHFPLLVEELAQVLPE 178
Query: 216 PVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF--LSGKPDIAMRRLMQGFGL 269
+D+ +IARR L+ + D+ A L+ D+ + ++Q +G
Sbjct: 179 GTRMVDSGAAIARRTAWLISSQENVVSSQEDNIAYCMALNADTDVLL-PVLQSYGF 233
>gi|169335598|ref|ZP_02862791.1| hypothetical protein ANASTE_02013 [Anaerofustis stercorihominis DSM
17244]
gi|169258336|gb|EDS72302.1| hypothetical protein ANASTE_02013 [Anaerofustis stercorihominis DSM
17244]
Length = 269
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 52/254 (20%), Positives = 96/254 (37%), Gaps = 12/254 (4%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
I I DSG+GGL V ++ L+P + IY+ D PYGN + + + S
Sbjct: 1 MNKNQPIGILDSGVGGLTVFKQTERLLPNENIIYLGDTKRMPYGNKSEEEIIILANKMIS 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA----IKQAAAYTQSGLISI 125
L++ ++ACNT + + + V A + ++ T LI +
Sbjct: 61 -YLEEQDVKAVLLACNTISSH----IEKLTSKVPIFSIVKAGSELATKKSSETNVDLIGL 115
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
++T AT+ + IH +I S L ++ + IK+ IE
Sbjct: 116 IATKATVNSGSYNKEIHKLNKDINIISNDSTRLPKVIDSQIENKPLLNQLIKECIEPIID 175
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+ K ++L C+H+P+I + + LD ++ + R L + +
Sbjct: 176 --KEKNVKNLILGCSHFPIIEKEINDIY-NDLTLLDPAEQMVENVRKYLKDKDLLKDNGT 232
Query: 246 DDHALFLSGKPDIA 259
L+ +
Sbjct: 233 SHKTLYTTADILEF 246
>gi|262341174|ref|YP_003284029.1| glutamate racemase [Blattabacterium sp. (Blattella germanica) str.
Bge]
gi|262272511|gb|ACY40419.1| glutamate racemase [Blattabacterium sp. (Blattella germanica) str.
Bge]
Length = 269
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 62/260 (23%), Positives = 102/260 (39%), Gaps = 15/260 (5%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ I IFDSGIGGL++ ++++ MP IY D PYG + + M + S L
Sbjct: 7 SPIGIFDSGIGGLLIAKEIKIQMPNEDLIYFGDTRNMPYGEKSKEFIIENSMKIAS-FLY 65
Query: 74 KYQPVLSVIACNTAFTLIKDEL-RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACN+ + D L ++ + + I + S I I++TPAT+
Sbjct: 66 KKKCKALVIACNSITSNALDILCKTFHRKILIFNVIDPIVKHKILLSSKRIGIIATPATI 125
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R + + I Y I +S+ +LA +E+ K I K
Sbjct: 126 RSNFYTKEIKKYYHHLDIVQISTSLLAPMIEKGFK-------IKKNIINNYLNRL--KSI 176
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL-- 250
D ++LACTHY + V +D + + + L +
Sbjct: 177 DTLLLACTHYLFLKQEIDNFYHGKVRLIDIQKIVVQEIKKTLNDDKLLCNHPTWNRKFPI 236
Query: 251 FLSGK--PDIAMRRLMQGFG 268
F + P +++ FG
Sbjct: 237 FYTSSLIPTFFEKQVRILFG 256
>gi|57238663|ref|YP_179794.1| glutamate racemase [Campylobacter jejuni RM1221]
gi|86152895|ref|ZP_01071100.1| glutamate racemase [Campylobacter jejuni subsp. jejuni HB93-13]
gi|57167467|gb|AAW36246.1| glutamate racemase [Campylobacter jejuni RM1221]
gi|85843780|gb|EAQ60990.1| glutamate racemase [Campylobacter jejuni subsp. jejuni HB93-13]
gi|315059102|gb|ADT73431.1| Glutamate racemase [Campylobacter jejuni subsp. jejuni S3]
Length = 247
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 55/258 (21%), Positives = 99/258 (38%), Gaps = 15/258 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GGL VL+ + IY D PYG + + K + ++
Sbjct: 2 KIGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEALEFF-EQ 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA---AAYTQSGLISILSTPAT 131
+Q + +IACNTA D LR T G + A +A A + ++ I +++T AT
Sbjct: 61 FQIDMLIIACNTASAYALDALR-TKAHFPVYGVIDAGVEATIKALHDKNKEILVIATKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + S +I+ +++ + VEE + ++ +
Sbjct: 120 IKSEEYQKRLLSQGY-TNINALATGLFVPMVEEGIFEGDFLQSAMEYYFKNITTP----- 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++LACTH+PL+ + + + D+I + R N +
Sbjct: 174 -DALILACTHFPLLGRSLSKYFGDKTKLIHSGDAIVEFLK---ERENIDLKNHKAKLHFY 229
Query: 252 LSGKPDIAMRRLMQGFGL 269
S + L
Sbjct: 230 ASSDVESLKNTAKIWLNL 247
>gi|56696751|ref|YP_167112.1| glutamate racemase [Ruegeria pomeroyi DSS-3]
gi|81558534|sp|Q5LS93|MURI_SILPO RecName: Full=Glutamate racemase
gi|56678488|gb|AAV95154.1| glutamate racemase [Ruegeria pomeroyi DSS-3]
Length = 269
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 55/266 (20%), Positives = 97/266 (36%), Gaps = 20/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL+ + +PE F+Y AD PYG + + L
Sbjct: 2 AVGIFDSGLGGLTVLEAAQKRLPEVEFLYYADSAHAPYGVRTPDDIFQLTRAAV-HDLWN 60
Query: 75 YQPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQS-----------G 121
L ++ACNTA ++ P LG + +A Q
Sbjct: 61 RGCDLVILACNTASAAALRRMQEEGVPPGKRVLGVFVPLIEALTERQWGDNSPPREVEVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +EE + + E ++ ++
Sbjct: 121 NVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEEG--DLILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+++ +L CTHYPL+ +F+ V + +A L R +
Sbjct: 179 AL--KRKMPYPQAAILGCTHYPLMEPIFQDALGPDVRVFSQGNLVADSLADYLERHPNMR 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+GKP R Q
Sbjct: 237 GSGAAG--YLTTGKPATVSNRATQFL 260
>gi|262199960|ref|YP_003271169.1| glutamate racemase [Haliangium ochraceum DSM 14365]
gi|262083307|gb|ACY19276.1| glutamate racemase [Haliangium ochraceum DSM 14365]
Length = 268
Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 60/257 (23%), Positives = 102/257 (39%), Gaps = 11/257 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL V++ +R +P+ Y+ D PYG+ +++ + L +
Sbjct: 8 IGVFDSGVGGLTVVRAVRAALPDRDIAYLGDTARVPYGSKSARTVERYALA-CQRFLLER 66
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ L ++ACNTA L + P A A + I ++ T AT+
Sbjct: 67 EVDLVLVACNTASATALPALAAASQVPVVGVVEPGAASAVAASTCMHIGVIGTLATVGSG 126
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
IH+ + V+ +L EE I ++ + F + D +
Sbjct: 127 AYPRAIHALAPGAAVSAVACPLLVPLAEEGWVDDDIARAVARRYLARLFEQ--DAEIDTL 184
Query: 196 VLACTHYPLIVHVFRQ----LSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
VL CTHYPL+ V + L PV +D++ ++A AR P + + A F
Sbjct: 185 VLGCTHYPLLAEVLAETAAALVGHPVAIVDSASAMAEVARAHGPDSD---GSRRGELACF 241
Query: 252 LSGKPDIAMRRLMQGFG 268
+ + G
Sbjct: 242 AT-DVSRIEELAPRFLG 257
>gi|332528172|ref|ZP_08404203.1| aspartate and glutamate racemase:glutamate racemase [Rubrivivax
benzoatilyticus JA2]
gi|332112743|gb|EGJ12536.1| aspartate and glutamate racemase:glutamate racemase [Rubrivivax
benzoatilyticus JA2]
Length = 247
Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 61/240 (25%), Positives = 105/240 (43%), Gaps = 7/240 (2%)
Query: 29 LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAF 88
L+ +R +P F+YVAD PYG+ L R + + + V+ACNT
Sbjct: 2 LRALRARLPAERFVYVADSGHAPYGDRPRPYLLGRAGAVAGFFV-AQRAKALVLACNTIS 60
Query: 89 TLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQC 148
+ + LR+ ++ + PAIK A A T+SG++ +L+T AT+ L + +
Sbjct: 61 VVAAETLRAHH-ALPIVAMEPAIKPAVAATRSGIVLVLATTATVHSPAVERLCRIWGREV 119
Query: 149 HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV 208
I L L +E+ + + + +E D++VL CTHY +
Sbjct: 120 EILLQPCPGLVELIEQ----GRFADPATRTLLERYLRPALDAGADMVVLGCTHYAFVQDE 175
Query: 209 FRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268
R+L+ V ++ SD++AR+ L + SG P+ A+RR ++ G
Sbjct: 176 IRRLAGAAVQVIEPSDAVARQLVHRLGPALAPAGAAGASTCYYSSGDPE-ALRRFLELMG 234
>gi|257784875|ref|YP_003180092.1| glutamate racemase [Atopobium parvulum DSM 20469]
gi|257473382|gb|ACV51501.1| glutamate racemase [Atopobium parvulum DSM 20469]
Length = 277
Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 62/230 (26%), Positives = 98/230 (42%), Gaps = 7/230 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GG+ VL+ + MP F Y D PYG + +R + +D+
Sbjct: 11 IGVFDSGVGGMSVLKHLVAQMPHETFHYFGDSAFAPYGTKPKEQIAQRSSVIAKKFIDE- 69
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
VIACNTA DELR+ +P ++ +G PA+K A G + +L+T ATL
Sbjct: 70 GAKALVIACNTATAAAADELRAAYPYLSIVGVEPALKPAVTAYPHGTVIVLATKATLSLQ 129
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
NL + + L +E + + + + G + D +
Sbjct: 130 KYHNLESRLHPSAKVISIPGEGLVELIESGQTDSEQLHKRLTELLGGY-----TGQVDAV 184
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
VL CTHYP I + V++ D A + + LL + N ++
Sbjct: 185 VLGCTHYPFIKKQISSVLG-NVEFFDGGAGAAHQLKRLLKQANLLTSKEN 233
>gi|304438688|ref|ZP_07398626.1| glutamate racemase [Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304368337|gb|EFM22024.1| glutamate racemase [Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 262
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 60/239 (25%), Positives = 95/239 (39%), Gaps = 5/239 (2%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG GGL VL R ++P FI+ AD PYG A++ + F ++++
Sbjct: 3 IALFDSGYGGLTVLSHARRVLPSEEFIFYADRDHVPYGTKSVPAVRGFVRTAFRFLIEQQ 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ V+ACNTA ++ DE+R + + +G PA+K+A + + +TP T+
Sbjct: 63 RADAVVVACNTATSVAVDEMRRLY-DVPIIGMEPAVKKALTRDAEHRVLVTATPITVHGE 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
LI S + L++ L E ++ + F I
Sbjct: 122 KLKRLISSCDPNGLVDLLALPQLVEFAERQE----FVSSAVEAYLRDAFAPYRFADYSAI 177
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
VL CTH+ RQL P V +D ++ F SG
Sbjct: 178 VLGCTHFNYFKDTMRQLLPQNVRLVDGNEGTVEELARRTGLRTQPIGAQTAHCTFFESG 236
>gi|237751612|ref|ZP_04582092.1| glutamate racemase [Helicobacter bilis ATCC 43879]
gi|229372978|gb|EEO23369.1| glutamate racemase [Helicobacter bilis ATCC 43879]
Length = 258
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 49/254 (19%), Positives = 96/254 (37%), Gaps = 14/254 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG GGL VL+ + + H +Y D PYGN + +++ + +
Sbjct: 7 IGIFDSGAGGLTVLKSLIEEVGFNHIVYYGDTARVPYGNKDTETIRRFSLEALEFF-SNF 65
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATLR 133
L V+ACNTA ++ I + I +++T AT++
Sbjct: 66 GLDLLVVACNTASAHALHAMQECSKIPIIGVIESGIAALTQQHIAKDKHILVIATEATIK 125
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + + +I +++ + S VEE+ ++ + ++ D
Sbjct: 126 SDNYAKSLRNLGY-TNITSLATNLFVSLVEEHVFSGEVVDSVLRHYFPPTLKP------D 178
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
V++L CTH+PL++ ++ V ++ + ++IA R + + F S
Sbjct: 179 VVILGCTHFPLLLLPMQKYFGSDVKFIHSGEAIACYVR----EHFKIEKNSKNLIDFFAS 234
Query: 254 GKPDIAMRRLMQGF 267
Sbjct: 235 DNVARLKSTAKLWL 248
>gi|159044309|ref|YP_001533103.1| glutamate racemase [Dinoroseobacter shibae DFL 12]
gi|189030360|sp|A8LMF7|MURI_DINSH RecName: Full=Glutamate racemase
gi|157912069|gb|ABV93502.1| glutamate racemase [Dinoroseobacter shibae DFL 12]
Length = 273
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 52/267 (19%), Positives = 98/267 (36%), Gaps = 21/267 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL VL + +PE F+Y D++ PYG + + + S L
Sbjct: 2 AVGVFDSGLGGLTVLDAVSRRLPEVPFVYYGDNLHAPYGVRDAEDVYELTTGAVSR-LWD 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQS-----------G 121
L ++ACNTA ++ ++ LG + +A Q
Sbjct: 61 EGCDLVILACNTASAAALRRMQESWVPSDKRVLGVFVPLIEALTERQWGDNSPPREVAIK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + +E+ + + E ++ +E
Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIGVDVEAQPCGGVVDAIEDG--DMILAEALVRSHVE 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI-NTH 240
++ + +L CTHYPL+ VF+ V + +A L R +
Sbjct: 179 AL--KRRMPHPEAAILGCTHYPLMQDVFQDALGADVKVYSQAQLVAESLADYLTRHPDML 236
Query: 241 QTRVFDDHALFLSGKPDIAMRRLMQGF 267
+G P + Q
Sbjct: 237 GLGAEPG--FLTTGDPKSVSNKATQFL 261
>gi|84515579|ref|ZP_01002941.1| Glutamate racemase [Loktanella vestfoldensis SKA53]
gi|84510862|gb|EAQ07317.1| Glutamate racemase [Loktanella vestfoldensis SKA53]
Length = 270
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 53/266 (19%), Positives = 95/266 (35%), Gaps = 19/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL + +P+ +Y+ D PYG + + L
Sbjct: 2 AVGIFDSGLGGLTVLDAVAKRLPDVPLVYLGDSAHAPYGVRTPDDIYNLTTA-ATQRLFD 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQS-----------G 121
L ++ACNTA ++ ++ LG + +A Q
Sbjct: 61 AGCDLVILACNTASAAALRRMQESWVPQGKRVLGVFVPLIEALTERQWGDNSPPREVAIK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +E+ + + E ++ ++
Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIGVDVEAQACGGVVDAIEDG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D VL CTHYPL+ VF+ ++ +A L R
Sbjct: 179 ALRRKM--PNPDAAVLGCTHYPLMEKVFQDALGPQAKVFSQANLVAESLADYLSRRPEM- 235
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
D A +G P R Q
Sbjct: 236 VGTGRDSAFLTTGDPARVSARATQFL 261
>gi|310816545|ref|YP_003964509.1| Glutamate racemase [Ketogulonicigenium vulgare Y25]
gi|308755280|gb|ADO43209.1| Glutamate racemase [Ketogulonicigenium vulgare Y25]
Length = 270
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 52/266 (19%), Positives = 95/266 (35%), Gaps = 19/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL VL + +P+ +Y D+ PYG + + L
Sbjct: 2 AVGVFDSGLGGLTVLDAVAKRLPDLPLVYFGDNAHAPYGVRTSDDIYNLTVSATQK-LFD 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA---VPAIKQ----------AAAYTQSG 121
L ++ACNTA ++ + VP I+ A
Sbjct: 61 NGCDLVILACNTASAAALKRMQENWVPEGKRVLGVFVPLIEALTERQWGDNTAPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +EE + + E ++ +E
Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEEG--DLILAEALVRSHVE 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+++ R D +L CTHYPL+ VF V ++ +A L R
Sbjct: 179 AL--KRKMPRPDAAILGCTHYPLMEKVFADALGDGVQVFSQANLVAESLADYLQRHPEMV 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ +G P +Q
Sbjct: 237 GPGMES-KFLTTGDPARVSSHAIQFL 261
>gi|153952642|ref|YP_001398928.1| glutamate racemase [Campylobacter jejuni subsp. doylei 269.97]
gi|152940088|gb|ABS44829.1| glutamate racemase [Campylobacter jejuni subsp. doylei 269.97]
Length = 247
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 53/258 (20%), Positives = 98/258 (37%), Gaps = 15/258 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GGL VL+ + IY D PYG + + K + ++
Sbjct: 2 KIGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEALEFF-EQ 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA---AAYTQSGLISILSTPAT 131
+Q + +IACNTA D LR+ G + A +A A + ++ I +++T AT
Sbjct: 61 FQINMLIIACNTASAYALDVLRA-KAHFPVYGVIDAGVEATIKALHDKNKEILVIATKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + +I+ +++ + VEE + ++ +
Sbjct: 120 IKSEEYQKRLLYQGY-TNINALATGLFVPMVEEGIFEGDFLQSAMEYYFKNITTP----- 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++LACTH+PL+ + + + D+I + R N +
Sbjct: 174 -DALILACTHFPLLGRSLSKYFGDKTKLIHSGDAIVEFLK---ERENIDLKNHKARLHFY 229
Query: 252 LSGKPDIAMRRLMQGFGL 269
S + L
Sbjct: 230 ASSDVESLKNTAKIWLNL 247
>gi|296116308|ref|ZP_06834924.1| glutamate racemase [Gluconacetobacter hansenii ATCC 23769]
gi|295977127|gb|EFG83889.1| glutamate racemase [Gluconacetobacter hansenii ATCC 23769]
Length = 278
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 89/239 (37%), Positives = 128/239 (53%), Gaps = 3/239 (1%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
IL FDSGIGGL +++ +R +P Y+AD FPYG D L R++ L + +
Sbjct: 3 ILAFDSGIGGLGIVRCLRTDLPGARIDYLADTAVFPYGEQADDFLVTRILTLVGQAIARL 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+P L VIACNTA TL D LR+ + F+G VP IK AA TQSG I +L+T ATL R
Sbjct: 63 RPDLVVIACNTASTLALDALRARH-RLPFVGCVPPIKWAADLTQSGTIGLLATRATLTRP 121
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
Y SNL + + C + + LA E G + E I+ E++G F + G DV+
Sbjct: 122 YLSNLRNRFAPGCTLITYGARNLADLSELAFRGRPVPERAIRMEMDGLFSQPGGDAIDVV 181
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF--DDHALFL 252
L CTHY ++ F++L + W+D + +++R+A L + T + HA F
Sbjct: 182 GLGCTHYTFLLDRFQRLGRPGLRWIDPAQAVSRQATRLAHNLGTVAAKGPYQPGHAFFT 240
>gi|86152334|ref|ZP_01070545.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 260.94]
gi|85840823|gb|EAQ58074.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 260.94]
Length = 247
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 55/258 (21%), Positives = 99/258 (38%), Gaps = 15/258 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GGL VL+ + IY D PYG + + K + ++
Sbjct: 2 KIGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEALEFF-EQ 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA---AAYTQSGLISILSTPAT 131
+Q + +IACNTA D LR T G + A +A A + ++ I +++T AT
Sbjct: 61 FQIDMLIIACNTASAYALDALR-TKAHFPVYGVIDAGVEATIKALHDKNKEILVIATKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + S +I+ +++ + VEE + ++ +
Sbjct: 120 IKSEEYQKRLLSQGY-TNINALATGLFVPMVEEGIFEGDFLQSAMEYYFKNITTP----- 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++LACTH+PL+ + + + D+I + R N +
Sbjct: 174 -DALILACTHFPLLGRSLSKYFGDKTKLIHSGDAIVEFLK---ERENIDLKNHKARLHFY 229
Query: 252 LSGKPDIAMRRLMQGFGL 269
S + L
Sbjct: 230 ASSDVESLKNTAKIWLNL 247
>gi|329891275|ref|ZP_08269618.1| glutamate racemase [Brevundimonas diminuta ATCC 11568]
gi|328846576|gb|EGF96140.1| glutamate racemase [Brevundimonas diminuta ATCC 11568]
Length = 287
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 58/281 (20%), Positives = 94/281 (33%), Gaps = 30/281 (10%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I +FDSG+GGL V +++ P FIY+ D PYG + + L +
Sbjct: 2 AIGVFDSGVGGLTVHRELTTRFPTRDFIYLGDQAHAPYGGRSGEDIVELTRAGCER-LFE 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF----------PSMAFLGAVPAIKQAAAYTQSG--- 121
+ V+ACNTA + L+ T+ P VP I+ A S
Sbjct: 61 AGASVVVLACNTASAIALRRLQQTWIPGMREKLGRPVNVLGIIVPTIEAATGLPWSFEAE 120
Query: 122 --------------LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC 167
+ + T AT I + + LA +E A
Sbjct: 121 RESRMEGEKKQAIDITGVFCTAATAMSRVYEIEIDKRRDDLAVFTEACPGLAGLIELGAP 180
Query: 168 GIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
++K + G+ D +L CTHY ++ +F Q P V + ++A
Sbjct: 181 PEELKVVVDDHV--DALRRRIGRHPDKAILGCTHYEIVADLFAQALPPGVQVISQPAAVA 238
Query: 228 RRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268
R + +G P + Q +G
Sbjct: 239 DSLERYFDRHPEYDLGSSARRDFLTTGTPGPQSDLVAQFWG 279
>gi|114771082|ref|ZP_01448522.1| Glutamate racemase [alpha proteobacterium HTCC2255]
gi|114548364|gb|EAU51250.1| Glutamate racemase [alpha proteobacterium HTCC2255]
Length = 269
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 49/266 (18%), Positives = 90/266 (33%), Gaps = 20/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL V Q++ +P+ +Y+ D+ PYG + + L
Sbjct: 2 PIGIFDSGLGGLTVQQEIASRIPDQSLVYLGDNKYAPYGVRDHEQIYSLTQNAIER-LWN 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQS-----------G 121
L ++ACNTA + ++ + + LG + +A Q
Sbjct: 61 AGCDLVIVACNTASAVAVKRMQEEWLPENKRVLGVFVPLIEAVTERQWGDNSAPKEVGVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + L +E ++ E ++ +
Sbjct: 121 QVALFATPATVATRAFQRELAFRAIGVDVEAQPCGGLVDAIE--ENDFELAEALVQSHVS 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ VL CTHYP++ F + V +A L R
Sbjct: 179 ALLRRMPNPQ--AAVLGCTHYPILKKCFEKALGPNVQVYSQGRIVAESLMHYLNRHPRF- 235
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ + +G D +
Sbjct: 236 -KEKGEALFLTTGDVDKVSLAATRFL 260
>gi|222823123|ref|YP_002574696.1| glutamate racemase [Campylobacter lari RM2100]
gi|222538344|gb|ACM63445.1| glutamate racemase [Campylobacter lari RM2100]
Length = 246
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 51/254 (20%), Positives = 98/254 (38%), Gaps = 14/254 (5%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+FDSG+GGL VL+ + +IY D PYG + + K + + +
Sbjct: 4 GVFDSGVGGLSVLKSLLQAKLFKEYIYYGDTARVPYGVKDKETIIKFSLEALEFF-KEKK 62
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT---QSGLISILSTPATLR 133
+ +IACNT + L++ S LG + A A + ++ I +++T AT+
Sbjct: 63 VDMLIIACNTVSAHALEILKA-NASFPVLGVIEAGVLAVKNSLEDKNSNILVIATQATVD 121
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + ++ + VEE D +K E F + + +
Sbjct: 122 SHAYKRALIKEGF-LKVEEKATGLFVPMVEEGIFQG----DFLKAAFEYYFNKLK-FHPN 175
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++LACTH+PLI H + + + ++IA + + N + + + S
Sbjct: 176 ALILACTHFPLIAHSLSEYFGKNTKLIHSGEAIALQLQ---QEFNLTSIQEEANVEFYAS 232
Query: 254 GKPDIAMRRLMQGF 267
+ +
Sbjct: 233 SDVEKLKKIANLWL 246
>gi|221639366|ref|YP_002525628.1| glutamate racemase [Rhodobacter sphaeroides KD131]
gi|221160147|gb|ACM01127.1| Glutamate racemase [Rhodobacter sphaeroides KD131]
Length = 266
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 51/263 (19%), Positives = 96/263 (36%), Gaps = 19/263 (7%)
Query: 18 IFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQP 77
+FDSG+GGL VL ++ +PE F+Y D+ PYG + + ++ L
Sbjct: 1 MFDSGLGGLTVLDAVQRRLPEVPFVYFGDNAHAPYGVRDADDIFHLTCA-ATERLWAEGC 59
Query: 78 VLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQS-----------GLIS 124
L ++ACNTA ++ T+ LG + +A Q ++
Sbjct: 60 DLVILACNTASAAALKRMQETWIPKDKRVLGVFVPLIEALTERQWGDNSPPREVAVKHVA 119
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+ +TPAT+ + + + +E+ + E ++ +E
Sbjct: 120 LFATPATVASRAFQRELAFRAIGVDVEAQPCGGVVDAIEQG--DEILAEALVRSHVEAL- 176
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
++ +L CTHYPL+ +F++ V ++ +A L R
Sbjct: 177 -KRRMPHPQAAILGCTHYPLMEPIFQEALGPEVSVYSQANLVAESLADYLARKPEFAGAG 235
Query: 245 FDDHALFLSGKPDIAMRRLMQGF 267
+ +G P + Q
Sbjct: 236 TES-KFLTTGDPRSVSNKATQFL 257
>gi|283953730|ref|ZP_06371261.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 414]
gi|283794771|gb|EFC33509.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 414]
Length = 247
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 50/255 (19%), Positives = 94/255 (36%), Gaps = 13/255 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG+ VL+ + IY D PYG + + K + +
Sbjct: 2 KIGVFDSGVGGISVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEALEFF-KQ 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY--TQSGLISILSTPATL 132
+Q + +IACNTA D LRS + +K ++ I +++T AT+
Sbjct: 61 FQIDMLIIACNTASAYALDALRSKAHFPIYGVIDAGVKSTIKTLPDKNKEILVIATKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ + S +I+ +++ + VEE + ++ + +
Sbjct: 121 KSEEYQKRLLSQGY-TNINALATGLFVPMVEEGIFEGDFLQSAMEYYFKNITVP------ 173
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++LACTH+PL+ + + + D+I + R N +
Sbjct: 174 DALILACTHFPLLGCSLSKYFGDKTKLIHSGDAIVEFLK---ERENISSKNYKAKLHFYA 230
Query: 253 SGKPDIAMRRLMQGF 267
S +
Sbjct: 231 SSDVESLKNTAKIWL 245
>gi|121612969|ref|YP_001001295.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 81-176]
gi|167006189|ref|ZP_02271947.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 81-176]
gi|87249921|gb|EAQ72880.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 81-176]
Length = 247
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 55/258 (21%), Positives = 99/258 (38%), Gaps = 15/258 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GGL VL+ + IY D PYG + + K + ++
Sbjct: 2 KIGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEALEFF-EQ 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA---AAYTQSGLISILSTPAT 131
+Q + +IACNTA D LR T G + A +A A + ++ I +++T AT
Sbjct: 61 FQIDMLIIACNTASAYALDALR-TKAHFPVYGVIDAGVEATIKALHDKNKEILVIATKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + S +I+ +++ + VEE + ++ +
Sbjct: 120 IKSEEYQKRLLSQGY-TNINALATGLFVPMVEEGIFEGDFLQSAMEYYFKNITTP----- 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++LACTH+PL+ + + + D+I + R N +
Sbjct: 174 -DALILACTHFPLLGCSLSKYFGDKTKLIHSGDAIVEFLK---ERENIDLKNHKARLHFY 229
Query: 252 LSGKPDIAMRRLMQGFGL 269
S + L
Sbjct: 230 ASSDVESLKNTAKIWLNL 247
>gi|89067791|ref|ZP_01155245.1| Glutamate racemase [Oceanicola granulosus HTCC2516]
gi|89046761|gb|EAR52816.1| Glutamate racemase [Oceanicola granulosus HTCC2516]
Length = 270
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 59/266 (22%), Positives = 106/266 (39%), Gaps = 19/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL+ ++ +PE F+Y+AD PYG + + + L +
Sbjct: 2 AVGIFDSGLGGLTVLEAVQKRLPEVPFVYMADSAHAPYGVRDADDIYDLTTASVAR-LFE 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQS-----------G 121
L+++ACNTA ++ ++ P+ LG + +A Q
Sbjct: 61 AGCDLAILACNTASAAALRRMQESWVPPNKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+R + + + + +EE + + E ++ ++
Sbjct: 121 HVALFATPATVRARAFQRELAFRAIGVDVEAQACGGVVDAIEEG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D VL CTHYPL+ VF+ V+ ++ +A L R
Sbjct: 179 ALLRKM--PEPDAAVLGCTHYPLMAEVFQDALGAGVNVFSQANLVAESLADYLERRPEMI 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
A +G P R Q
Sbjct: 237 GEGTQG-AFLTTGDPKRVSSRATQFM 261
>gi|86138828|ref|ZP_01057400.1| glutamate racemase [Roseobacter sp. MED193]
gi|85824475|gb|EAQ44678.1| glutamate racemase [Roseobacter sp. MED193]
Length = 269
Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 52/266 (19%), Positives = 97/266 (36%), Gaps = 20/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL+ + +P+ F+Y AD PYG + + +D+
Sbjct: 2 AVGIFDSGLGGLTVLKAAQSRLPDVDFLYYADSARAPYGVRDAEDIFNLTKAAVNDM-WS 60
Query: 75 YQPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQS-----------G 121
L ++ACNTA ++ LG + +A Q
Sbjct: 61 KGCDLVILACNTASAAALRRMQEEGLPAGKRVLGVFVPLIEAMTERQWGDNSPPREVEVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +E+ + + E ++ ++
Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIGVDVEAQACGGIVDAIEDG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+++ + +L CTHYPL+ F+ V + +A L R
Sbjct: 179 AL--KRKMPEPEAAILGCTHYPLMEKEFQAALGAGVKVFSQGNLVADSLADYLDRHPDMI 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
F +G P R Q
Sbjct: 237 GTGNGG--YFTTGDPARVSDRATQFL 260
>gi|291166140|gb|EFE28186.1| glutamate racemase [Filifactor alocis ATCC 35896]
Length = 257
Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 62/243 (25%), Positives = 104/243 (42%), Gaps = 12/243 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGGL VL ++P +FIY AD PYG ++ + + + + K
Sbjct: 3 IGIFDSGIGGLSVLHHALKIIPHANFIYYADRKNVPYGEKSVFEIQTFIDEIMNFFISK- 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--STPATLR 133
+ VIACNTA ++ E R FP +G PA+K+A IL +TP T++
Sbjct: 62 KVDALVIACNTASSVATKEYRDKFP-FPIIGMEPAVKKAVETYTEKQQRILVAATPITIQ 120
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
L++ L++ L E + E+++ I+ +
Sbjct: 121 GNKLRQLLNRVDKYHQADLIALPKLVHFAELK----QFDSLEVEEYIKTALNQYCAVDYS 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
IVL CTH+ F+++ ++D ++ ++ LL + ++ + S
Sbjct: 177 AIVLGCTHFNYFKPSFQRIFSKKTQFIDGNEGTIKQ---LLRKAPLIESYSQ-SVQFYFS 232
Query: 254 GKP 256
G P
Sbjct: 233 GIP 235
>gi|283957038|ref|ZP_06374510.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 1336]
gi|283791539|gb|EFC30336.1| glutamate racemase [Campylobacter jejuni subsp. jejuni 1336]
Length = 247
Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 52/258 (20%), Positives = 98/258 (37%), Gaps = 15/258 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GGL VL+ + IY D PYG + + K + ++
Sbjct: 2 KIGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEALEFF-EQ 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA---AAYTQSGLISILSTPAT 131
+Q + +IACNTA D L++ G + A +A A + ++ I +++T AT
Sbjct: 61 FQIDMLIIACNTASAYALDALKA-KAHFPVYGVIDAGVEATIKALHDKNKEILVIATKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + +I+ +++ + VEE + ++ +
Sbjct: 120 IKSEEYQKRLLFQGY-TNINALATGLFVPMVEEGIFEGDFLQSAMEYYFKNITTP----- 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D ++LACTH+PL+ + + + D+I + R N +
Sbjct: 174 -DALILACTHFPLLGRSLSKYFGDKTKLIHSGDAIVEFLK---ERENIDLKNHKARLHFY 229
Query: 252 LSGKPDIAMRRLMQGFGL 269
S + L
Sbjct: 230 ASSDVESLKNTAKIWLNL 247
>gi|188582653|ref|YP_001926098.1| glutamate racemase [Methylobacterium populi BJ001]
gi|179346151|gb|ACB81563.1| glutamate racemase [Methylobacterium populi BJ001]
Length = 286
Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 103/246 (41%), Positives = 151/246 (61%), Gaps = 2/246 (0%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ Q IL+FDSG+GGL VL+++R P+ ++Y ADD FPYG + + L R++ +
Sbjct: 13 QNAQPVILVFDSGLGGLTVLEQVRRARPDAAYVYAADDAAFPYGAFTEERLVSRVIAVME 72
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+L ++ P L VIACNTA TL+ LR F + F+G VP IK AAA T+S LIS+L+TP
Sbjct: 73 RLLARHAPDLVVIACNTASTLVLPALRQRFVT-PFVGVVPPIKPAAALTRSRLISLLATP 131
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-E 188
T+ R YT +L+ ++ + C + LV S LA E G + + + EI CF+E+ +
Sbjct: 132 GTVARAYTHDLVRNFAAHCAVTLVGSKNLAGYAEAEMAGEPVSDAALLAEIAPCFVEQAD 191
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
G+RTDV+ L+CTHYPL++ F +L+PWPV W+D + +IARR LL +
Sbjct: 192 GRRTDVVCLSCTHYPLLLPRFERLAPWPVTWIDPAPAIARRVIQLLGEMPAQAPEAPPAR 251
Query: 249 ALFLSG 254
A+F G
Sbjct: 252 AVFTGG 257
>gi|254475982|ref|ZP_05089368.1| glutamate racemase [Ruegeria sp. R11]
gi|214030225|gb|EEB71060.1| glutamate racemase [Ruegeria sp. R11]
Length = 269
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 51/266 (19%), Positives = 96/266 (36%), Gaps = 20/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL + +P+ F+Y D+ PYG + + + + + +
Sbjct: 2 AVGIFDSGLGGLTVLDAAQRRLPDVDFLYYGDNARAPYGVRDAEDVFQLTNNAVNAM-WE 60
Query: 75 YQPVLSVIACNTAFTLIKDELRS--TFPSMAFLGAVPAIKQAA-----------AYTQSG 121
L ++ACNTA ++ LG + +A ++
Sbjct: 61 RGCDLVILACNTASAAALRRMQEAGVPEGKRVLGVFVPLIEALTEREWGDNSPPREVETK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + S L +E+ + + + +K ++
Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQSCGGLVDAIEDG--DMILADALVKSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ + +L CTHYPL+ F+ V +A L R Q
Sbjct: 179 ALLRKMPNPQ--AAILGCTHYPLMEDAFQAALGPKVKVFSQGALVAESLADYLTRHP--Q 234
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
A +G + R Q
Sbjct: 235 MLGTGGSAYLTTGDANRVSTRATQFL 260
>gi|315638310|ref|ZP_07893491.1| glutamate racemase [Campylobacter upsaliensis JV21]
gi|315481657|gb|EFU72280.1| glutamate racemase [Campylobacter upsaliensis JV21]
Length = 248
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 46/257 (17%), Positives = 87/257 (33%), Gaps = 13/257 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ + IY D PYG + + K + +
Sbjct: 3 IGVFDSGVGGLSVLKSLYEANLFEEIIYYGDTARVPYGVKDKETIIKFCLEALEFF-KSF 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPATLR 133
+ + +IACNTA + LR+ + ++ + I +++T AT+
Sbjct: 62 KIDMLIIACNTASAYALEALRARADFPIYGVIEAGVRATCKNLEDKDKEILVIATKATIN 121
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + +++ + VEE + + + K D
Sbjct: 122 SRQYQINLEKEGF-TRVKALATGLFVPMVEEGIFEGEFLKSAFLHYFKDV------KSPD 174
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++LACTH+PL+ + + + ++I R + F S
Sbjct: 175 ALILACTHFPLLSKALSEFFGSKTRLIHSGEAIVEFLR---ENSHFKLLDKRAKLRFFAS 231
Query: 254 GKPDIAMRRLMQGFGLK 270
+ L
Sbjct: 232 SDIKSLEKTAKIWLNLS 248
>gi|162420811|ref|YP_001604760.1| glutamate racemase [Yersinia pestis Angola]
gi|165928375|ref|ZP_02224207.1| glutamate racemase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165936981|ref|ZP_02225547.1| glutamate racemase [Yersinia pestis biovar Orientalis str. IP275]
gi|166009624|ref|ZP_02230522.1| glutamate racemase [Yersinia pestis biovar Antiqua str. E1979001]
gi|166213755|ref|ZP_02239790.1| glutamate racemase [Yersinia pestis biovar Antiqua str. B42003004]
gi|167401233|ref|ZP_02306733.1| glutamate racemase [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167420886|ref|ZP_02312639.1| glutamate racemase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167425952|ref|ZP_02317705.1| glutamate racemase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|270488739|ref|ZP_06205813.1| glutamate racemase [Yersinia pestis KIM D27]
gi|294505559|ref|YP_003569621.1| glutamate racemase [Yersinia pestis Z176003]
gi|162353626|gb|ABX87574.1| glutamate racemase [Yersinia pestis Angola]
gi|165915223|gb|EDR33834.1| glutamate racemase [Yersinia pestis biovar Orientalis str. IP275]
gi|165919605|gb|EDR36938.1| glutamate racemase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165991546|gb|EDR43847.1| glutamate racemase [Yersinia pestis biovar Antiqua str. E1979001]
gi|166205157|gb|EDR49637.1| glutamate racemase [Yersinia pestis biovar Antiqua str. B42003004]
gi|166961015|gb|EDR57036.1| glutamate racemase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167049258|gb|EDR60666.1| glutamate racemase [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167055100|gb|EDR64899.1| glutamate racemase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|262363626|gb|ACY60347.1| glutamate racemase [Yersinia pestis D106004]
gi|262367556|gb|ACY64113.1| glutamate racemase [Yersinia pestis D182038]
gi|270337243|gb|EFA48020.1| glutamate racemase [Yersinia pestis KIM D27]
gi|294356018|gb|ADE66359.1| glutamate racemase [Yersinia pestis Z176003]
Length = 240
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 71/235 (30%), Positives = 121/235 (51%), Gaps = 4/235 (1%)
Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95
MP+ H+IY D+V FPYG + +R++ + + + ++ + VIACNTA T+ L
Sbjct: 1 MPDLHYIYAFDNVAFPYGEKSGEFIVERVLEIVTAVQQRHPLAIVVIACNTASTVSLPAL 60
Query: 96 RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS 155
R F + +G VPAIK A T++G++ +L+T AT+ +YT +LI + + C I L+ S
Sbjct: 61 RERF-AFPVVGVVPAIKPAVRLTRNGVVGLLATRATVHASYTLDLIARFATDCKIELLGS 119
Query: 156 MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW 215
L E G + + +KK + +E D IVL CTH+PL+ Q+ P
Sbjct: 120 SELVEVAETKLHGGVVPLEVLKKILHPWLSMREPP--DTIVLGCTHFPLLTEELAQVLPE 177
Query: 216 PVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS-GKPDIAMRRLMQGFGL 269
+D+ +IARR L+ + ++ A ++ + A+ ++Q +G
Sbjct: 178 GTRMVDSGAAIARRTAWLISSQENVISSQDENIAYCMALDEDTDALLPVLQSYGF 232
>gi|114766197|ref|ZP_01445197.1| Glutamate racemase [Pelagibaca bermudensis HTCC2601]
gi|114541568|gb|EAU44611.1| Glutamate racemase [Roseovarius sp. HTCC2601]
Length = 270
Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats.
Identities = 51/266 (19%), Positives = 95/266 (35%), Gaps = 19/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL VL + +PE F+Y AD PYG + + L +
Sbjct: 2 AVGVFDSGLGGLTVLDAVSKRLPEVPFVYFADSAHAPYGVRDADDIYNLTTAAVER-LWE 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA---VPAIKQAAAYTQS----------G 121
L ++ACNTA ++ ++ VP I+
Sbjct: 61 AGCDLVILACNTASAAALRRMQESWIPRDKRVLGVFVPLIEAMTERQWGDNSPPREVAVQ 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+R + + + L +EE + + E ++ ++
Sbjct: 121 HVALFATPATVRSRAFQRELAFRAIGVDVEAQACGGLVDAIEEG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+++ +L CTHYPL+ F++ V ++ +A L R
Sbjct: 179 AL--KRKMPSPQAAILGCTHYPLMQETFQEALGEDVAVYSQANLVAESLADYLQRHPGM- 235
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+G P +
Sbjct: 236 IGTGTTSRFLTTGDPRKVSGHATRFL 261
>gi|145629155|ref|ZP_01784954.1| glutamate racemase [Haemophilus influenzae 22.1-21]
gi|144978658|gb|EDJ88381.1| glutamate racemase [Haemophilus influenzae 22.1-21]
Length = 217
Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats.
Identities = 64/215 (29%), Positives = 107/215 (49%), Gaps = 5/215 (2%)
Query: 9 EKKLQNS-ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
KK + +L FDSG+GG V ++ + L+P + ++Y D+ GFPY ++ ++ R +
Sbjct: 2 NKKEKRPTVLFFDSGVGGFSVYREAKKLLPNWRYLYCFDNAGFPYSERKEESIIHRTLAA 61
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
I +Y VIACNTA T++ LR+ F + +G VPAIK A+ T++ I +L+
Sbjct: 62 CQLINQRYPLDAIVIACNTASTVVLPPLRAAF-DIPIIGTVPAIKPASEITKTKHIGLLA 120
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T++R Y LI + C + + + L E+ G + +K E+
Sbjct: 121 TKGTVKRHYIDELIDKFAQDCIVERLGTTKLVEIAEQKIRGHSVDLISLKDELSPWA--- 177
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222
+ D +VL CTH+PLI + P + +
Sbjct: 178 DMADLDTLVLGCTHFPLIKDEIQLCLPQVKYFYGS 212
>gi|254462580|ref|ZP_05075996.1| glutamate racemase [Rhodobacterales bacterium HTCC2083]
gi|206679169|gb|EDZ43656.1| glutamate racemase [Rhodobacteraceae bacterium HTCC2083]
Length = 270
Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats.
Identities = 55/266 (20%), Positives = 95/266 (35%), Gaps = 19/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL VL R +P+ F+Y AD PYG + + +R L
Sbjct: 2 AVGVFDSGLGGLTVLDAARARLPDVPFVYYADSAHAPYGVRDSEDIYQRTKKAVG-YLWA 60
Query: 75 YQPVLSVIACNTAFTLIKDELRS--TFPSMAFLGAVPAIKQAAAYTQS-----------G 121
L ++ACNTA ++ LG + +A +
Sbjct: 61 NGCDLVILACNTASAAALRRMQEAGVPKGKRVLGVFVPLIEALTEREWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
++I +TPAT+ + + + + +E+ + + E ++ +E
Sbjct: 121 EVAIFATPATIASRAFQRELAFRAIGVDVEAQACGGVVDAIEDG--DMILAEALVRSHVE 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+++ +L CTHYPL+ F+ V + +A L R
Sbjct: 179 AL--KRKMPEPQAAILGCTHYPLMETHFQAALGEDVKVYSQAGLVAESLADYLERRPDFI 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
H F SG P Q
Sbjct: 237 GSGKM-HRYFTSGDPARVSDHATQFM 261
>gi|91202612|emb|CAJ72251.1| similar to glutamate racemase [Candidatus Kuenenia stuttgartiensis]
Length = 266
Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats.
Identities = 60/263 (22%), Positives = 111/263 (42%), Gaps = 7/263 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ + I IFDSG+G L +++++R +P ++IY+AD FPYG L +
Sbjct: 1 MTIDDPIAIFDSGVGSLSIIKEIRNSLPGENYIYLADKKHFPYGKKTHDELLLIIRNTIE 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ + P L V+A NT + EL+ + G P + +A + +++G I+IL+T
Sbjct: 61 YLSKNFTPKLIVLASNTPSIQVLHELKKGAVDVI--GVFPPVNEAVSVSKTGHIAILATQ 118
Query: 130 ATLRRTYTSNLIHSYVSQ--CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T+ + IHS I ++ + VE ++ E +E+
Sbjct: 119 NTILSSELDEYIHSQEMPASAKIIKWNASRMVDLVETGDFLSNKEKSLRIISEELSLLEE 178
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
D I L+ TH P + F L + +D + +A + + LL R N T
Sbjct: 179 TDNMVDTITLSSTHLPFLNEYFT-LLRPCLHLIDPAKIVAGKVKSLLER-NLRTTSQKGT 236
Query: 248 HALFLSGKPDIAMRRLMQGFGLK 270
+ + + + + G++
Sbjct: 237 LEILATQGKESLETIIKR-LGIQ 258
>gi|227894671|ref|ZP_04012476.1| glutamate racemase [Lactobacillus ultunensis DSM 16047]
gi|227863510|gb|EEJ70931.1| glutamate racemase [Lactobacillus ultunensis DSM 16047]
Length = 268
Score = 178 bits (451), Expect = 9e-43, Method: Composition-based stats.
Identities = 53/242 (21%), Positives = 90/242 (37%), Gaps = 8/242 (3%)
Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA 87
V++K+ +P I++ D+ PYGN + L L +IACNTA
Sbjct: 18 VVKKVIKKLPNESTIFIGDNAHMPYGNRTKEDIINLTRKSV-KFLLNNDVKLVIIACNTA 76
Query: 88 FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQ 147
D + AA T++ +++++T T+ IH +
Sbjct: 77 TAAAMDTIEKEIDPQVIGVIQSGALAAARTTKNKKVAVVATSVTIASHAYEKEIHFRDPE 136
Query: 148 CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVH 207
+ +++ LA VE + ++ +GK D +VL CTHYPLI
Sbjct: 137 IKVTELAAPKLAPLVEAQE-----DHATNLRVVKESLAPLQGKDFDTLVLGCTHYPLIKR 191
Query: 208 VFRQLSPWP-VDWLDNSDSIARRARCLLPRINTHQTRVFDD-HALFLSGKPDIAMRRLMQ 265
F + P V LD +D +A+ ++ R H + +G PD +
Sbjct: 192 EFTEAVDDPKVTILDPADQVAQYTFNVMRRDGLFSEERHKAVHKYYTTGNPDNFDKLART 251
Query: 266 GF 267
Sbjct: 252 FM 253
>gi|295692284|ref|YP_003600894.1| glutamate racemase [Lactobacillus crispatus ST1]
gi|295030390|emb|CBL49869.1| Glutamate racemase [Lactobacillus crispatus ST1]
Length = 268
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 47/242 (19%), Positives = 93/242 (38%), Gaps = 8/242 (3%)
Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA 87
V +K+ +P +++ D+ PYG+ + + + L L + ACNTA
Sbjct: 18 VAKKVIEKLPNESTVFIGDNAHMPYGDRTKEEIIELVRKSV-QFLLDKNVKLIIFACNTA 76
Query: 88 FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQ 147
+ +++ A+ T++ ++++ST AT + I +
Sbjct: 77 TAMAMSTIQAEIDPQIIGVIQSGSLAASRTTKNKKVAVVSTKATAESHAYAKEIRFRDPE 136
Query: 148 CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVH 207
+ +++ LA VE + + K ++ +GK D +++ CTHYPLI
Sbjct: 137 IQVTELAAPKLAPLVE-----AQKDHETNLKVVKESLTPLQGKDFDTLIMGCTHYPLIQK 191
Query: 208 VFRQLS-PWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALFLSGKPDIAMRRLMQ 265
F++ V LD +D +A+ ++ R H + +G P R
Sbjct: 192 EFKEAINDKNVTILDPADQVAQYTFNVMRRDGLFSDGNEKVSHEYYTTGDPTSFDRLART 251
Query: 266 GF 267
Sbjct: 252 FM 253
>gi|119386680|ref|YP_917735.1| glutamate racemase [Paracoccus denitrificans PD1222]
gi|189030363|sp|A1B945|MURI_PARDP RecName: Full=Glutamate racemase
gi|119377275|gb|ABL72039.1| glutamate racemase [Paracoccus denitrificans PD1222]
Length = 270
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 49/266 (18%), Positives = 91/266 (34%), Gaps = 19/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL VL + MP+ +Y+ D+ PYG + + L
Sbjct: 2 AVGVFDSGLGGLTVLSAIAARMPDLPLVYLGDNAHTPYGVRDADDIFDLTCAGVER-LWA 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQS-----------G 121
L ++ACNTA ++ T+ LG + +A +
Sbjct: 61 EGCDLVILACNTASAAALKRMQETWLPKDKRVLGVFVPMIEALTERRWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + +E + E + +E
Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQPCGGVVDAIEMG--DEILAEALVTSHVE 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ +L CTHYPL+ F++ V + +A L R
Sbjct: 179 ALLRRM--PHPEAAILGCTHYPLVQAAFQKALGPQVTVYSQPNLVAESLEDYLGRHPEM- 235
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ +G P+ + Q
Sbjct: 236 LGAGNVSRFLTTGDPERVSGKATQFL 261
>gi|57241965|ref|ZP_00369905.1| glutamate racemase [Campylobacter upsaliensis RM3195]
gi|57017157|gb|EAL53938.1| glutamate racemase [Campylobacter upsaliensis RM3195]
Length = 248
Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 45/257 (17%), Positives = 87/257 (33%), Gaps = 13/257 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ +FDSG+GGL VL+ + IY D PYG + + K + +
Sbjct: 3 VGVFDSGVGGLSVLKSLYEANLFEEIIYYGDTARVPYGVKDKETIIKFCLEALEFF-KSF 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPATLR 133
+ + +IACNTA + LR+ + ++ + I +++T AT+
Sbjct: 62 KIDMLIIACNTASAYALEALRARADFPIYGVIEAGVRATCKNLQDKDKEILVIATKATIN 121
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + +++ + VEE + + + K D
Sbjct: 122 SKQYQISLKKEGF-TRVKALATGLFVPMVEEGIFEGEFLKSAFLHYFKDV------KSPD 174
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++LACTH+PL+ + + + ++I R + F S
Sbjct: 175 ALILACTHFPLLSKALSEFFGSKTRLIHSGEAIVEFLR---ENSHFKLLDKRAKLRFFAS 231
Query: 254 GKPDIAMRRLMQGFGLK 270
+ L
Sbjct: 232 SDIKTLEKTAKIWLNLS 248
>gi|85703353|ref|ZP_01034457.1| Glutamate racemase [Roseovarius sp. 217]
gi|85672281|gb|EAQ27138.1| Glutamate racemase [Roseovarius sp. 217]
Length = 270
Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 54/266 (20%), Positives = 101/266 (37%), Gaps = 19/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL V + +P+ F+Y+ D+ PYG + + L
Sbjct: 2 AVGIFDSGLGGLTVWDAVSKRLPDVPFVYLGDNAHTPYGVRDADDIYDLTTTSVDR-LFA 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFP--SMAFLGAVPAIKQAAAYTQS-----------G 121
L ++ACNTA ++ ++ LG + +A Q
Sbjct: 61 AGCDLVILACNTASAAALRRMQESWVPRDKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+R + + + + +EE + + E ++ ++
Sbjct: 121 NVALFATPATVRSRAFQRELAFRAIGVDVEAQACGGVVDAIEEG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+++ + VL CTHYPL+ VF+ V + +A L R ++
Sbjct: 179 AL--KRKMPHPEAAVLGCTHYPLVQEVFQDALGPDVAVYSQPNLVASSLADYLGRHP-NK 235
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ A +G P R Q
Sbjct: 236 IGAGTESAFLTTGDPKRVSSRATQFL 261
>gi|302381780|ref|YP_003817603.1| glutamate racemase [Brevundimonas subvibrioides ATCC 15264]
gi|302192408|gb|ADK99979.1| Glutamate racemase [Brevundimonas subvibrioides ATCC 15264]
Length = 312
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 54/293 (18%), Positives = 94/293 (32%), Gaps = 29/293 (9%)
Query: 2 KIDNYPCEKKLQNS---ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58
K + L + I +FDSG+GGL V +++ +Y+AD P G+
Sbjct: 15 KTAYTFAGQGLNAAPMAIGVFDSGVGGLTVHRELTRRFSTRDLVYLADQANAPIGSRSGE 74
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTF----------PSMAFLGAV 108
+ + L + + V+ACNTA + L+ T+ P V
Sbjct: 75 EIVEITRNGCER-LFQAGASVVVLACNTASAVALRRLQQTWVAEAAVRHGRPLNVLGIIV 133
Query: 109 PAIKQAAAYTQSG-------------LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS 155
P I+ A + + + T AT I +
Sbjct: 134 PTIEAATGLPWTYEAERLGDKVEAIDITGVFCTAATAISRVYEIEIDKRREDLAVFSEPC 193
Query: 156 MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW 215
LA +E A +++ + G+ D +L CTHY ++ +F P
Sbjct: 194 PGLAGLIELGAPTEELRVVVADHV--DALRRRIGRHPDTAILGCTHYEIVADLFAAALPD 251
Query: 216 PVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268
+ ++A R + +GK R+ Q +G
Sbjct: 252 GTTLIHQPSAVADALERYFARHPEYALGDSGRRTFLTTGKTGPQSDRVSQFWG 304
>gi|294676108|ref|YP_003576723.1| glutamate racemase [Rhodobacter capsulatus SB 1003]
gi|294474928|gb|ADE84316.1| glutamate racemase [Rhodobacter capsulatus SB 1003]
Length = 270
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 48/266 (18%), Positives = 89/266 (33%), Gaps = 19/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL V + + +PE F+Y D+ PYG + L
Sbjct: 2 AVGVFDSGLGGLTVYEAVSKRLPEVAFVYYGDNAHAPYGVRTPDDIYNLTCRGVQR-LWD 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQS-----------G 121
L ++ACNTA ++ + LG + +A Q
Sbjct: 61 EGCDLVILACNTASAAALKRMQEHWIPKDKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + +E + E ++ +E
Sbjct: 121 HVALFATPATVASRAFQRELAYRAIGVDVEAQPCGGVVDAIEAG--DEILAEALVRSHVE 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++ + +L CTHYPL+ F++ V ++ +A L R
Sbjct: 179 AL--KRRMPHPEAAILGCTHYPLMQKTFQEALGPQVKVYSQANLVAESLADYLTRKPEF- 235
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+G Q
Sbjct: 236 LGPGTVSKFITTGDAASVSMHATQFL 261
>gi|282852140|ref|ZP_06261497.1| glutamate racemase [Lactobacillus gasseri 224-1]
gi|282556704|gb|EFB62309.1| glutamate racemase [Lactobacillus gasseri 224-1]
Length = 241
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 42/233 (18%), Positives = 78/233 (33%), Gaps = 7/233 (3%)
Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95
MP I++ D PYG+ + + +L K + + CNTA + +
Sbjct: 1 MPNESTIFIGDQANMPYGDRSKEEIISLTRDSVNFLLSK-DVKIIIFGCNTATAVAMSTI 59
Query: 96 RSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS 155
+ P AA T++ ++++ T AT+ I + + +
Sbjct: 60 KKEIPLQIIGVVQSGALAAARTTETKNVAVIGTKATVNSHSYLKEIQYRDPKIQVSEFAQ 119
Query: 156 MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW 215
LA E E+ + + + D +VL CTHYPL+ +
Sbjct: 120 PKLAPLAE-----EDPAEEIKQAVVSESLAPLKKADYDTLVLGCTHYPLLRKEIVAVVGQ 174
Query: 216 PVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALFLSGKPDIAMRRLMQGF 267
+D +D +A+ +L R H + +G+ Q
Sbjct: 175 DRKIVDPADQVAQYTYNVLRRDGLFAAGNSDTKHEYYTTGEAKKFTEITRQWM 227
>gi|297622727|ref|YP_003704161.1| glutamate racemase [Truepera radiovictrix DSM 17093]
gi|297163907|gb|ADI13618.1| glutamate racemase [Truepera radiovictrix DSM 17093]
Length = 270
Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats.
Identities = 57/255 (22%), Positives = 96/255 (37%), Gaps = 12/255 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ +FDSG+GGL VL +R L+P HF+YV D PYG+ ++ + + +L
Sbjct: 8 PLGVFDSGVGGLTVLAALRALLPAEHFLYVGDTARVPYGSKPLEMVRAFAAEICA-LLLS 66
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA L + P + P ++ A G I +L T T+R
Sbjct: 67 RGVKGIVVACNTASAAALPGLAAELPVPVWGVIAPGVQAALRRAPGGRIGVLGTAGTIRT 126
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + C + + VEE I + ++ + D
Sbjct: 127 GAYQRPLE--AAGCRVWARPCPLFVPIVEEGVSDTVIARLVAEHYLK------DAPALDA 178
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-HALFLS 253
+L CTHYP + + ++ P LD+++ AR L + ++
Sbjct: 179 AILGCTHYPALKGILSEVLP-GTALLDSAEETARVVAHDLALLGLANPNAAPGTVRHLVT 237
Query: 254 GKPDIAMRRLMQGFG 268
G + G
Sbjct: 238 GDLPSYAHTA-RLLG 251
>gi|227877591|ref|ZP_03995646.1| glutamate racemase [Lactobacillus crispatus JV-V01]
gi|256844565|ref|ZP_05550051.1| glutamate racemase [Lactobacillus crispatus 125-2-CHN]
gi|256849046|ref|ZP_05554479.1| glutamate racemase [Lactobacillus crispatus MV-1A-US]
gi|262047528|ref|ZP_06020483.1| glutamate racemase [Lactobacillus crispatus MV-3A-US]
gi|293381594|ref|ZP_06627581.1| glutamate racemase [Lactobacillus crispatus 214-1]
gi|227862815|gb|EEJ70279.1| glutamate racemase [Lactobacillus crispatus JV-V01]
gi|256613643|gb|EEU18846.1| glutamate racemase [Lactobacillus crispatus 125-2-CHN]
gi|256713822|gb|EEU28810.1| glutamate racemase [Lactobacillus crispatus MV-1A-US]
gi|260572104|gb|EEX28669.1| glutamate racemase [Lactobacillus crispatus MV-3A-US]
gi|290921864|gb|EFD98879.1| glutamate racemase [Lactobacillus crispatus 214-1]
Length = 268
Score = 175 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 46/242 (19%), Positives = 93/242 (38%), Gaps = 8/242 (3%)
Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA 87
V +K+ +P +++ D+ PYG+ + + + L + L + ACNTA
Sbjct: 18 VAKKVIEKLPNESTVFIGDNAHMPYGDRTKEEIIELVRKSV-QFLLEKNVKLIIFACNTA 76
Query: 88 FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQ 147
+ +++ A+ T++ ++++ST AT + I +
Sbjct: 77 TAMAMSTIQAEIDPQIIGVIQSGSLAASRTTKNKKVAVVSTKATAESHAYAKEIRFRDPE 136
Query: 148 CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVH 207
+ +++ LA VE + + K ++ +GK D +++ CTHYPLI
Sbjct: 137 IQVTELAAPKLAPLVE-----AQKDHETNLKVVKESLTPLQGKDFDTLIMGCTHYPLIQK 191
Query: 208 VFRQLS-PWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALFLSGKPDIAMRRLMQ 265
F++ V LD +D +A+ ++ R H + +G P
Sbjct: 192 EFKEAINDKNVTILDPADQVAQYTFNVMRRDGLFSDGNEKVSHEYYTTGDPTSFDHLART 251
Query: 266 GF 267
Sbjct: 252 FM 253
>gi|126726358|ref|ZP_01742199.1| glutamate racemase [Rhodobacterales bacterium HTCC2150]
gi|126704221|gb|EBA03313.1| glutamate racemase [Rhodobacterales bacterium HTCC2150]
Length = 270
Score = 175 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 50/266 (18%), Positives = 95/266 (35%), Gaps = 19/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL VL M+ +P+ F+Y D + PYG + + + L +
Sbjct: 2 AVGVFDSGLGGLTVLAAMQERLPDQAFVYYGDQINSPYGVRTPDDIYQLT-AAATHSLWE 60
Query: 75 YQPVLSVIACNTAFTLIKDELRST--FPSMAFLGAVPAIKQAAAYTQS-----------G 121
L ++ACNTA ++ LG + +A Q
Sbjct: 61 QGCDLVILACNTASAAALRRMQEEGVPKGKRVLGVFVPLIEALTERQWGDNSPPREVDVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TP+T+ + + + +E+ + + + ++ +E
Sbjct: 121 NVALFATPSTVASRAFQRELAFRAIGVDVEAQPCGGVVDAIEDG--DMMLADALVRSHVE 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++ +L CTHYPL+ F+ V + +A L R
Sbjct: 179 AL--KRRMPNPHAAILGCTHYPLMQSEFQDALGADVKVFSQAQVVADSLADYLERHPNM- 235
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
T + +G P R Q
Sbjct: 236 TGQAKETKYLTTGDPTKVTMRATQFL 261
>gi|332297563|ref|YP_004439485.1| Glutamate racemase [Treponema brennaborense DSM 12168]
gi|332180666|gb|AEE16354.1| Glutamate racemase [Treponema brennaborense DSM 12168]
Length = 282
Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats.
Identities = 72/243 (29%), Positives = 113/243 (46%), Gaps = 7/243 (2%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
DSG GGL ++ ++ PE +Y+AD FPYG + + + I+ K+Q
Sbjct: 6 AFLDSGTGGLPYMRYLKQQCPEARCVYLADTFHFPYGEKSVSQIIRYATDVSDLIIRKWQ 65
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
P VIACNT D LR FP F+G VPA+KQAAA T++G+I +L+T T+R Y
Sbjct: 66 PKAVVIACNTMSVTALDSLRKRFPQTPFIGTVPAVKQAAACTRNGIIGLLATTRTVRDPY 125
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + C + L +E + + E K+ ++ + D ++
Sbjct: 126 TDALIRKFAPGCTVVRRGDGALIDFIEHRL--VSAPDAERKRAVQPAADFFKSHGADTVI 183
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL---LPRINTHQTRV--FDDHALF 251
L CTH+ I ++ V +D+ + R+A + +PR R D F
Sbjct: 184 LGCTHFVHIADDIQEAVGRGVSVIDSRSGVVRQALKVAFTVPRAGKAAEREPLPADGTFF 243
Query: 252 LSG 254
++G
Sbjct: 244 VTG 246
>gi|259419026|ref|ZP_05742943.1| glutamate racemase [Silicibacter sp. TrichCH4B]
gi|259345248|gb|EEW57102.1| glutamate racemase [Silicibacter sp. TrichCH4B]
Length = 269
Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats.
Identities = 51/266 (19%), Positives = 94/266 (35%), Gaps = 20/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL + +P+ F+Y D+ PYG + + + D+
Sbjct: 2 AVGIFDSGLGGLTVLDAAQKRLPDVDFLYYGDNSHAPYGVRDAEDIYQLTHKAVHDM-WD 60
Query: 75 YQPVLSVIACNTAFTLIKDELRS--TFPSMAFLGAVPAIKQAAAYTQS-----------G 121
L ++ACNTA ++ LG + +A Q
Sbjct: 61 RGCNLVILACNTASAAALRRMQEAGVPEGKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +E+ + + E +K ++
Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEDG--DMILAEALVKSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ R + +L CTHYPL+ +F++ V +A L R
Sbjct: 179 ALLRKM--PRPEAAILGCTHYPLMEDIFQKALGPDVQVFSQGRLVADSLAHYLERRPDMI 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+G R Q
Sbjct: 237 GGGAAG--YLTTGNAGRVSSRATQFL 260
>gi|99080963|ref|YP_613117.1| glutamate racemase [Ruegeria sp. TM1040]
gi|123077676|sp|Q1GHL1|MURI_SILST RecName: Full=Glutamate racemase
gi|99037243|gb|ABF63855.1| glutamate racemase [Ruegeria sp. TM1040]
Length = 269
Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats.
Identities = 53/266 (19%), Positives = 96/266 (36%), Gaps = 20/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL + +P+ F+Y D+ PYG + + + D+
Sbjct: 2 AVGIFDSGLGGLTVLDAAQKRLPDVDFLYYGDNSHAPYGVRDAEDIYELTHKAVHDM-WD 60
Query: 75 YQPVLSVIACNTAFTLIKDELRS--TFPSMAFLGAVPAIKQAAAYTQS-----------G 121
L ++ACNTA ++ LG + +A Q
Sbjct: 61 RGCNLVILACNTASAAALRRMQEAGVPEGKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +EE + + E +K ++
Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEEG--DMILAEALVKSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ R + +L CTHYPL+ VF++ V +A L R
Sbjct: 179 ALLRKM--PRPEAAILGCTHYPLMEDVFQKALGPDVQVFSQGRLVADSLAHYLERRPEM- 235
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ +G + R Q
Sbjct: 236 -IGGGNAGYVTTGNANRVSSRATQFL 260
>gi|149204811|ref|ZP_01881774.1| Glutamate racemase [Roseovarius sp. TM1035]
gi|149141780|gb|EDM29833.1| Glutamate racemase [Roseovarius sp. TM1035]
Length = 270
Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats.
Identities = 53/266 (19%), Positives = 99/266 (37%), Gaps = 19/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL V + +PE +Y+ D+ PYG + + L
Sbjct: 2 AVGIFDSGLGGLTVWDAVSKRLPEVPLVYLGDNAHAPYGVRDADDIYDLTTSSVER-LFA 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFP--SMAFLGAVPAIKQAAAYTQS-----------G 121
L ++ACNTA ++ ++ LG + +A Q
Sbjct: 61 AGCDLVILACNTASAAALRRMQESWVPRDKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+R + + + + +E+ + + E ++ ++
Sbjct: 121 NVALFATPATVRSRAFQRELAFRAIGVDVEAQACGGVVDAIEDG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+++ + VL CTHYPL+ VF+ V + +A L R +
Sbjct: 179 AL--KRKMPHPEAAVLGCTHYPLVQEVFQDALGPDVAVYSQPNLVASSLADYLGRHPD-K 235
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ A +G P R Q
Sbjct: 236 IGAGAEAAFLTTGDPKRVSSRATQFL 261
>gi|189501895|ref|YP_001957612.1| hypothetical protein Aasi_0473 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497336|gb|ACE05883.1| hypothetical protein Aasi_0473 [Candidatus Amoebophilus asiaticus
5a2]
Length = 260
Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats.
Identities = 51/262 (19%), Positives = 101/262 (38%), Gaps = 12/262 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ N I IFDSG+GGL V + ++ L+P Y+ D PYG ++ + + D+
Sbjct: 1 MHNPIGIFDSGVGGLTVARAIKDLLPNESLYYIGDTANLPYGEKSTEQIQAYVKEI-GDV 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYT-QSGLISILSTP 129
L K + VIAC+TA + L+ + L + + + ++ T
Sbjct: 60 LLKQGCKVIVIACSTATAAAAEVLKDYIGDHIPVLNVIDPVIAYVRQHYMGKTLGLIGTQ 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ T + + + ++ +++ +L +E + K ++G E
Sbjct: 120 YTVNTTTYVQKLEASQANINLKCLATPLLVPMIE--------ADQYEKAILQGYLSEPIL 171
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
++L CTHY LI ++ ++ + +A + +L N + +
Sbjct: 172 TDIKGLILGCTHYWLIKEQIIDYYQAKIEIINGAQLLAIHLQKMLLDRNINNSMSNSSKD 231
Query: 250 LFL-SGKPDIAMRRLMQGFGLK 270
F + + FG K
Sbjct: 232 YFTATKHTVGFESVTKRVFGEK 253
>gi|221195778|ref|ZP_03568831.1| glutamate racemase [Atopobium rimae ATCC 49626]
gi|221184252|gb|EEE16646.1| glutamate racemase [Atopobium rimae ATCC 49626]
Length = 284
Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats.
Identities = 60/230 (26%), Positives = 96/230 (41%), Gaps = 7/230 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ +FDSGIGG+ VL+++ +P FI+ D PYG+ ++ + +D+
Sbjct: 26 VGVFDSGIGGISVLKRLVTELPYERFIFYGDSAHAPYGSKTPQQVQALSGAITDTFVDE- 84
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
VIACNTA LR +P + +G PA+K AA G I +++T TL +
Sbjct: 85 GAKAIVIACNTATAAAAQMLRERYPQLPIVGVEPALKPAALAHSQGRIIVMATARTLSLS 144
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
L + + I ++ + +E D ++K I D +
Sbjct: 145 KFLRLEAQWGATSQIIPIAGTGIVELIEAGKANSPQMHDLLEKLIGQY-----RGTVDAV 199
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
VL CTHYP I R + VD+ D A++ LL +
Sbjct: 200 VLGCTHYPFITSQIRAVLG-NVDFYDGGTGAAQQLHRLLKTEDLLAQEPA 248
>gi|83951823|ref|ZP_00960555.1| Glutamate racemase [Roseovarius nubinhibens ISM]
gi|83836829|gb|EAP76126.1| Glutamate racemase [Roseovarius nubinhibens ISM]
Length = 270
Score = 175 bits (443), Expect = 8e-42, Method: Composition-based stats.
Identities = 49/266 (18%), Positives = 90/266 (33%), Gaps = 19/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL + +P+ +Y D+ PYG + + L
Sbjct: 2 AVGIFDSGLGGLTVLSAIEKRLPDLPLVYFGDNAHAPYGVRDADDIHNLTRQHVE-YLWA 60
Query: 75 YQPVLSVIACNTAFTLIKDELRS--TFPSMAFLGAVPAIKQAAAYTQS-----------G 121
L ++ACNTA ++ LG + +A
Sbjct: 61 NGCDLVILACNTASAAALRRMQEAGVPQGKRVLGVFVPLIEALTERNWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + S + +E+ + + E ++ ++
Sbjct: 121 HVALFATPATVSSRAFQRELAFRAIGVDVEAQSCGGVVDAIEDG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+++ +L CTHYPL+ F+ V +A L R +
Sbjct: 179 AL--KRKMPNPQAAILGCTHYPLMEAQFQAALGEDVAVYSQPSLVADSLADYLGRRPDMR 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+G P R Q
Sbjct: 237 -GAGKATRFVTTGDPGRVSDRATQFL 261
>gi|32265523|ref|NP_859555.1| glutamate racemase [Helicobacter hepaticus ATCC 51449]
gi|32261571|gb|AAP76621.1| glutamate racemase [Helicobacter hepaticus ATCC 51449]
Length = 247
Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 42/253 (16%), Positives = 81/253 (32%), Gaps = 12/253 (4%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+FDSG+GGL VL+ + IY D PYG + + K + +
Sbjct: 4 GVFDSGVGGLSVLKSLINAKLFEDIIYYGDTARVPYGVKDKQTIIKFSLQALEFF-TPHN 62
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL--ISILSTPATLRR 134
+ ++ACNT E++ P + + I I++T AT+
Sbjct: 63 IDILIVACNTVSAYALQEMQKHSKIPIVGVIEPGVLAVQNNLKDTDSEILIIATRATINS 122
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + ++ +++ + VEE + E +
Sbjct: 123 GEYETRLRNIGF-WNLKSLATGLFVPIVEEGLLEGAVLESVFHHYFASITTPPQ-----A 176
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
++L CTH+PLI + + ++I + L + F S
Sbjct: 177 VILGCTHFPLIAPALDSYFNHQSMLIHSGEAIVEYLKNHL---HLTSRYALKSLQFFASD 233
Query: 255 KPDIAMRRLMQGF 267
+ +
Sbjct: 234 NTAALTKIANKWL 246
>gi|238917207|ref|YP_002930724.1| glutamate racemase [Eubacterium eligens ATCC 27750]
gi|259509814|sp|C4Z114|MURI_EUBE2 RecName: Full=Glutamate racemase
gi|238872567|gb|ACR72277.1| glutamate racemase [Eubacterium eligens ATCC 27750]
Length = 265
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 57/247 (23%), Positives = 97/247 (39%), Gaps = 11/247 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSGIGGL VL + MPE +I+ AD PYG ++K + L
Sbjct: 2 KIGIFDSGIGGLSVLHQAMITMPEADYIFYADVDNVPYGEKTREEVRKLVDHAVG-FLVD 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
V+ACNTA + LR + + +G PA+K A +T + ++STP T
Sbjct: 61 KGCQAIVLACNTATSAAISYLREKYK-LPIIGIEPAVKPAVEHTSETGRRVMVVSTPVTA 119
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ LI Y + + +V+ L ++ ++ F
Sbjct: 120 KGEKLKRLIDKYDDKHVVDVVALPKLVRFA----QDDDFDSSDVTDYLKCEFAPYNLNDY 175
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR---VFDDHA 249
+VL CTH+ F +L P ++ +D + ++ + + + +
Sbjct: 176 SELVLGCTHFNYFKDSFAKLFPDDLEMVDGNTGVSNNLKNTVMKKGIFTEKDKGKKGSVE 235
Query: 250 LFLSGKP 256
+ S +
Sbjct: 236 YYYSDRK 242
>gi|313681673|ref|YP_004059411.1| glutamate racemase [Sulfuricurvum kujiense DSM 16994]
gi|313154533|gb|ADR33211.1| glutamate racemase [Sulfuricurvum kujiense DSM 16994]
Length = 248
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 51/255 (20%), Positives = 91/255 (35%), Gaps = 14/255 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ +FDSG+GGL V++ + IY D PYG + + + + + +
Sbjct: 3 VGVFDSGVGGLSVVKSLLEHKLFEEIIYFGDTARVPYGVKDQNTIIRYSLEALEFF-KNF 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA--AAYTQSGLISILSTPATLR 133
+ L + ACNT DE+R P + A + I IL T AT++
Sbjct: 62 EIDLLITACNTVSAYALDEMREHSHCDVIGVVDPGVLALKNAIPSNDANILILGTKATVK 121
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ S ++ +++ +L VEE ++ + + K D
Sbjct: 122 SGAYEKGLRSLGY-RNLSAIATSLLVPIVEEGLYEGEVLQSALHHYFRD-----LEKTPD 175
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALFL 252
I+L CTH+PL+ + + ++I L R + F
Sbjct: 176 AIILGCTHFPLVARAIDTYFEGKSTLIHSGEAIVE----YLESHYDFTKRFDTTNLKFFA 231
Query: 253 SGKPDIAMRRLMQGF 267
S P+ R +
Sbjct: 232 SENPEGLRRVAKEWL 246
>gi|325847040|ref|ZP_08169866.1| glutamate racemase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325481012|gb|EGC84057.1| glutamate racemase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 248
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 57/253 (22%), Positives = 108/253 (42%), Gaps = 17/253 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+++ + ++ Y+ D+ PYGN + + K + L K
Sbjct: 4 IGVFDSGLGGLTVLRELSKKH-KANYFYLGDNKNVPYGNKSNEEIIKLSKDIV-KFLIKK 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
VIACNT + ELR F IK+A ++G + +++T AT +
Sbjct: 62 DIDFFVIACNTISVVAIKELREEFDKKFISITDEGIKEALN--KNGDVFVMATKATCKNH 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+I S+ ++ S L +EE ++I +++ K+ + I
Sbjct: 120 AYKKIIEGRSSK-KVYEESCPKLVDYIEEGILSG----EKIDSQLKDYLTIANEKKIENI 174
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+L CTHYP+I + + + +D + +AR + + ++++
Sbjct: 175 ILGCTHYPIIKKTIEKNLTYKANIIDPAKVLARDIV--------FEQDKNLNIEIYMTDV 226
Query: 256 PDIAMRRLMQGFG 268
+I+ + G
Sbjct: 227 NEISQDMTNKIMG 239
>gi|329847625|ref|ZP_08262653.1| asp/Glu/Hydantoin racemase family protein [Asticcacaulis
biprosthecum C19]
gi|328842688|gb|EGF92257.1| asp/Glu/Hydantoin racemase family protein [Asticcacaulis
biprosthecum C19]
Length = 284
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 60/275 (21%), Positives = 100/275 (36%), Gaps = 26/275 (9%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+FDSG+GGL + + +P+ FIY+AD PYG+ + + L +
Sbjct: 4 GVFDSGVGGLSIHHALVNRLPQADFIYLADQKHTPYGDRSGEEIVELTRQGCE-TLFEAG 62
Query: 77 PVLSVIACNTAFTLIKDELRSTF----------PSMAFLGAVPAIKQAA----------- 115
L V+ACNTA + L+ T+ P VP I+ A
Sbjct: 63 ASLVVLACNTASAVALRRLQQTWLSGFRKTYKRPVNVLGIIVPTIEAATGLPWEHEAERR 122
Query: 116 --AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE 173
+ ++ + +T AT R I + + LA +E+
Sbjct: 123 GEKIEKLDIVGVFATVATARSRVYEIEIDKRRQDIAVFTEACSGLADMIEKG-ADRDSLS 181
Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+IK +E + G+ D +L CTHY L+ +FRQ P + S+A+
Sbjct: 182 AKIKGHVES-LRIRVGRYPDRAILGCTHYELVADLFRQHLPAGTPIIHQPPSVAKAMGDY 240
Query: 234 LPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268
+ R + +G P + +G
Sbjct: 241 VERHTKYDIGSSGARTFLTTGTPGSQSALIEAFWG 275
>gi|34557207|ref|NP_907022.1| glutamate racemase [Wolinella succinogenes DSM 1740]
gi|34482923|emb|CAE09922.1| GLUTAMATE RACEMASE [Wolinella succinogenes]
Length = 248
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 50/254 (19%), Positives = 93/254 (36%), Gaps = 13/254 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ +FDSGIGGL V++ + IY D PYG + + + + + L ++
Sbjct: 3 VGVFDSGIGGLSVVKSLLDSHAFEEIIYFGDTARVPYGVKDSETIIRYSLEALA-FLREF 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY--TQSGLISILSTPATLR 133
+ ++ACNTA + LR P + ++ I ++ T AT
Sbjct: 62 DIDMLIVACNTASAHALEALRQAADVDVIGVIEPGVLALENRLPDKNSPILVIGTKATTA 121
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
L+ + HI +++ +L VEE + E ++ ++ +
Sbjct: 122 SGQYPALLKEHGY-THIQSLATGLLVPLVEEGIFHGSLLESALEHYFSSLAVKPK----- 175
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
I+L CTH+PLI + + ++I + + QT F S
Sbjct: 176 AIILGCTHFPLIAKAISAYFNHEPLLIHSGEAIMQHLKERYELDYFPQTH----IQYFAS 231
Query: 254 GKPDIAMRRLMQGF 267
P + +
Sbjct: 232 ENPLALEKVAKEWL 245
>gi|295698712|ref|YP_003603367.1| glutamate racemase [Candidatus Riesia pediculicola USDA]
gi|291157340|gb|ADD79785.1| glutamate racemase [Candidatus Riesia pediculicola USDA]
Length = 270
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 68/250 (27%), Positives = 117/250 (46%), Gaps = 8/250 (3%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
ILI DSG+GGL V + + +P + YV D+ FPYGN ++ + KR++ L
Sbjct: 3 NINFSQKILILDSGLGGLSVYKYLVRKLPNLSYTYVFDNEFFPYGNRKESFIIKRVIRLI 62
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
I + + ++ACNT + + L+ F LG+VP I A +T++ +I +L+T
Sbjct: 63 DQIQRDREFEIIILACNTVSVVSINILKDIFSDYIILGSVPEIDVAIQFTKNKVIYVLAT 122
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+ Y N + Y + IHLVSS L +EE G I +++I ++ +
Sbjct: 123 KRTIE--YIRNKVSFYSKEFKIHLVSSSKLVRMIEEKIRGKIILKNKIYSILKNLSNHQI 180
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ---TRVF 245
D IVL CTHY I ++ P ++ +D+ +I + + + + +
Sbjct: 181 ---PDTIVLGCTHYSFISKEIKEAFPKCINLIDSKKNIYDDLTNYVDKRSKKKEYYDKYH 237
Query: 246 DDHALFLSGK 255
++ F
Sbjct: 238 ENMVFFTKSD 247
>gi|325474017|gb|EGC77205.1| glutamate racemase [Treponema denticola F0402]
Length = 271
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 67/249 (26%), Positives = 115/249 (46%), Gaps = 7/249 (2%)
Query: 18 IF-DSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+F DSGIGGL L+ ++ L P+ YVAD FPYG + + L I++K +
Sbjct: 10 VFIDSGIGGLPYLRHLKELEPQSSCAYVADTKHFPYGEKTLEEVIEYTEDLVKKIIEKLK 69
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
P + +IACNT LR F + F+G VPAIK AA +++ I++L+T T+ Y
Sbjct: 70 PSVIIIACNTMTVSALSHLRKKF-EIPFVGTVPAIKPAALTSKNKKIAVLATERTVNDIY 128
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
NLI + + C + + +L S++E E++ K I + TD V
Sbjct: 129 VQNLIEEFGADCKFFMRADSVLVSKIENTLLSG--SEEDKKAGIRPAVEFFKSAGTDTAV 186
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA---LFLS 253
L CTH+ + F+ + +D+ D + +A + P + ++ +++
Sbjct: 187 LGCTHFLHLRDEFKSECEPDIKIVDSLDGVVNQALKISPPQKSKTDEKLNNIQKDIFYIT 246
Query: 254 GKPDIAMRR 262
+ +
Sbjct: 247 SEKTEESEK 255
>gi|224437846|ref|ZP_03658793.1| glutamate racemase [Helicobacter cinaedi CCUG 18818]
gi|313144294|ref|ZP_07806487.1| glutamate racemase [Helicobacter cinaedi CCUG 18818]
gi|313129325|gb|EFR46942.1| glutamate racemase [Helicobacter cinaedi CCUG 18818]
Length = 246
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 45/254 (17%), Positives = 82/254 (32%), Gaps = 14/254 (5%)
Query: 17 LIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+FDSGIGGL VL+ + + + IY D PYG + + + + +
Sbjct: 4 GVFDSGIGGLSVLKSLINAKLFDE-IIYYGDTARVPYGVKDKQTIIRFSLEALDFF-KPH 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL--ISILSTPATLR 133
+ ++ACNT +E++ P + + I IL+T AT+
Sbjct: 62 NIDILIVACNTVSAYALEEMQKHSKIPIVGVIEPGVLAVQNKLKDTDSEILILATRATIN 121
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ ++ +++ + VEE + E +G
Sbjct: 122 SGEYETRLRKIGF-WNLKSLATGLFVPLVEEGLLEGAVLESVFDYYFSNFTNPPKG---- 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
I+L CTH+PLI + + ++I L F S
Sbjct: 177 -IILGCTHFPLIADALSAYFNNQSVLIHSGEAIVEYLETHLQ---LRTQYPLKSLQFFAS 232
Query: 254 GKPDIAMRRLMQGF 267
+ +
Sbjct: 233 DNTASLTKIAQKWL 246
>gi|84503079|ref|ZP_01001175.1| Glutamate racemase [Oceanicola batsensis HTCC2597]
gi|84388623|gb|EAQ01495.1| Glutamate racemase [Oceanicola batsensis HTCC2597]
Length = 270
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 54/266 (20%), Positives = 101/266 (37%), Gaps = 19/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL + +P+ F+Y D+ PYG + + + + D
Sbjct: 2 AVGIFDSGLGGLTVLDAVTKRLPDVPFVYFGDNAHAPYGVRDADDIYDLTTRAVARMFDA 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFP--SMAFLGAVPAIKQAAAYTQS-----------G 121
L V+ACNTA ++ ++ LG + +A Q
Sbjct: 62 -GCDLVVLACNTAAAAALRRMQESWVPADKRVLGVFVPLIEALTERQWGDNSPPREVAVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TPAT+ + + + + +EE + + E ++ ++
Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEEG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+++ R + +L CTHYPL+ VF+ V ++ +A L R
Sbjct: 179 AL--KRKMPRPEAAILGCTHYPLMDEVFQAALGPEVAVYSQANLVAASLADYLGRRPEFI 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
+ +G P R Q
Sbjct: 237 GPGTESL-FLTTGDPARVSSRATQFL 261
>gi|315037664|ref|YP_004031232.1| glutamate racemase [Lactobacillus amylovorus GRL 1112]
gi|312275797|gb|ADQ58437.1| glutamate racemase [Lactobacillus amylovorus GRL 1112]
Length = 268
Score = 172 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 46/242 (19%), Positives = 93/242 (38%), Gaps = 8/242 (3%)
Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA 87
V +K+ +P +++ D+ PYG+ + + + L + L + ACNTA
Sbjct: 18 VAKKVIEKLPNESTVFIGDNAHMPYGDRIKEEIIELVRKSV-QFLLEKNVKLIIFACNTA 76
Query: 88 FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQ 147
+ +++ A+ T++ ++++ST AT + I +
Sbjct: 77 TAMAMSTIQAEIDPQIIGVIQSGSLAASRTTKNKKVAVVSTKATAESHAYAKEIRFRDPE 136
Query: 148 CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVH 207
+ +++ LA VE + + K ++ +GK D +++ CTHYPLI
Sbjct: 137 IQVTELAAPKLAPLVE-----AQKDHETNLKVVKESLTPLQGKDFDTLIMGCTHYPLIQK 191
Query: 208 VFRQLS-PWPVDWLDNSDSIARRARCLLPRINTHQTRVFD-DHALFLSGKPDIAMRRLMQ 265
F++ V LD +D +A+ ++ R H + +G P
Sbjct: 192 EFKEAINDKNVTILDPADQVAQYTFNVMRRDGLFSDGNEKVSHEYYTTGDPTSFDHLART 251
Query: 266 GF 267
Sbjct: 252 FM 253
>gi|152996178|ref|YP_001341013.1| glutamate racemase [Marinomonas sp. MWYL1]
gi|189030362|sp|A6VX99|MURI_MARMS RecName: Full=Glutamate racemase
gi|150837102|gb|ABR71078.1| glutamate racemase [Marinomonas sp. MWYL1]
Length = 275
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 64/223 (28%), Positives = 110/223 (49%), Gaps = 6/223 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ + DSG GGL +L + P +Y+ADD PYG+ L+ RL+ +
Sbjct: 2 KVGVMDSGAGGLTILNAIHQKHPYLDLVYLADDAFAPYGSKSITQLQDRLVK-VGRFFEN 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ V+ACNTA D LR+ S+ +G PA+K A ++ +++L+TP T
Sbjct: 61 EKVCAIVVACNTATVAAIDALRA-STSLPIIGVEPAVKPAFRLSKKRRVAVLATPVTAES 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ LI + H+ ++SS+ LA ++ + E+++K+ IE E + D
Sbjct: 120 PRLNQLIDLWKEDSHVSIMSSLTLAFDIDAW----PETEEKVKQTIEQLSQEMLAQNIDT 175
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237
+VLACTHYPL+ H+F Q+ + ++ S+ + + L
Sbjct: 176 LVLACTHYPLVKHLFEQILGDECEIIEPSEGVTAQLIRRLTES 218
>gi|198284544|ref|YP_002220865.1| glutamate racemase [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218666518|ref|YP_002427212.1| glutamate racemase [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198249065|gb|ACH84658.1| glutamate racemase [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218518731|gb|ACK79317.1| glutamate racemase [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 269
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 56/257 (21%), Positives = 101/257 (39%), Gaps = 10/257 (3%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGGL L +P+ H+++ D PYG+ +++
Sbjct: 3 IGIFDSGIGGLSTLLSCLRYLPDAHYLFYGDSAHAPYGDKSPAQVREWT-EAAYAWFIAA 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA + LR + +G PAI++A G + +L+T T+
Sbjct: 62 GVDAVVLACNTATSAAVAPLRE-RADVPIIGIEPAIRKALTEHPQGGVLLLATSITVGGE 120
Query: 136 YTSNLIHSYVSQCH-IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
NL++ + + ++ LA +E +++ + ++ V
Sbjct: 121 KLRNLLNLLENGQERVRPLACSGLAEIIEAQDADWRLR---AGRYLQAQVRPARTADIGV 177
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP---RINTHQTRV-FDDHAL 250
+VL CTHY I + + +D ++ +AR+ L R +T +L
Sbjct: 178 VVLGCTHYCWIDDLIHDTLGGDITVVDGNEGVARQLCRRLGVPIRTDTAPPLPRHARISL 237
Query: 251 FLSGKPDIAMRRLMQGF 267
+ + D+ Q
Sbjct: 238 YFTANNDVKSHLARQLL 254
>gi|242310721|ref|ZP_04809876.1| glutamate racemase [Helicobacter pullorum MIT 98-5489]
gi|239523119|gb|EEQ62985.1| glutamate racemase [Helicobacter pullorum MIT 98-5489]
Length = 253
Score = 172 bits (435), Expect = 7e-41, Method: Composition-based stats.
Identities = 51/256 (19%), Positives = 90/256 (35%), Gaps = 12/256 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG+ VL+ + IY D PYG + + +
Sbjct: 4 KKIGVFDSGVGGISVLKSLIDSDSFEEIIYYGDTARVPYGVRSKETIIQYSLEALEFF-K 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY--TQSGLISILSTPAT 131
++ L V+ACNT D ++ P + ++ I IL T AT
Sbjct: 63 QFNLDLLVVACNTISAYALDSMQKFANYPIVGVIEPGVLALTNNLDNKNANILILGTKAT 122
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ NL+H+ +I+ +++ + VEE +I E +K + +
Sbjct: 123 INSNLYQNLLHTQGY-TNINGLATSLFVPIVEEGIFEGEILESTMKYYFKDY-----KES 176
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D I+L CTH+PLI + + ++I + + + +
Sbjct: 177 PDAIILGCTHFPLIAKAIANYYQNKPILIHSGNAIMEYLK---QQYTFQSIKHKTKITFY 233
Query: 252 LSGKPDIAMRRLMQGF 267
S D
Sbjct: 234 ASDSLDKLKNTANLWL 249
>gi|254419828|ref|ZP_05033552.1| Asp/Glu/Hydantoin racemase superfamily [Brevundimonas sp. BAL3]
gi|196186005|gb|EDX80981.1| Asp/Glu/Hydantoin racemase superfamily [Brevundimonas sp. BAL3]
Length = 285
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 57/282 (20%), Positives = 95/282 (33%), Gaps = 34/282 (12%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+I +FDSG+GGL V +++ P+ F+Y+AD PYG + + L +
Sbjct: 2 AIGVFDSGVGGLTVHRELTRRFPQRDFVYLADQAHAPYGGRGGEDIVELTRAGCER-LFE 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF----------PSMAFLGAVPAIKQAAAYTQSGL-- 122
+ V+ACNTA + L+ T+ P VP I+ A S
Sbjct: 61 AGASVVVLACNTASAIALRRLQQTWIPGLRERLGRPVNVLGIIVPTIEAATGKPWSFEAE 120
Query: 123 -------------ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
+ T AT I + LA +E A
Sbjct: 121 RAAEGDKVEAIAVTGVFCTAATAISRVFEIEIDKRREDIAVFSEPCPGLAGLIELGA--- 177
Query: 170 KIKEDEIKKEIEGCFIEKE---GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI 226
+E+K ++ G+ D +L CTHY +I +F P ++ ++
Sbjct: 178 --PREELKVVVDDHVDALRRRIGRHPDKAILGCTHYEIIAELFASALPAGTVLINQPTAV 235
Query: 227 ARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGFG 268
A R + +G+ + Q +G
Sbjct: 236 ADALERYFARHPEFELGDSGRRDFLTTGQAGPQSEMVSQFWG 277
>gi|328947305|ref|YP_004364642.1| glutamate racemase [Treponema succinifaciens DSM 2489]
gi|328447629|gb|AEB13345.1| Glutamate racemase [Treponema succinifaciens DSM 2489]
Length = 278
Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats.
Identities = 62/253 (24%), Positives = 109/253 (43%), Gaps = 12/253 (4%)
Query: 12 LQNSI--LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ I DSG GG+ + ++ PE +Y+ D V FPYG + +
Sbjct: 1 MSEKIDFAFLDSGTGGIPYMLSLKEKSPESRCVYLGDTVHFPYGEKSEEEVTLCASESIE 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
ILD + P + VIACNT ++LR FP + +G VPAIK AA T++ I +L+T
Sbjct: 61 KILDLWNPRIVVIACNTISVTALNQLRERFPDVPIVGTVPAIKLAAKVTKNKKIGLLATN 120
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT++ Y L+ + S + L + +E ++E ++
Sbjct: 121 ATVKHPYCKKLVSDFASGYEVFNRGDPDLITFIEHDLF--YASKEERTAAVKPAVDFFCS 178
Query: 190 KRTDVIVLACTHYPLIVHVFRQ----LSPWPVDWLDNSDSIARRARCLLPRINTHQTRV- 244
D I+L CTH+ + ++ ++ V +D+ D ++ A ++ + R
Sbjct: 179 CGCDTIILGCTHFTHMAEDIKEYFSTVAGKKVFVVDSRDGVSNHALEVVKITSLENQREP 238
Query: 245 ---FDDHALFLSG 254
D + F++
Sbjct: 239 KFLPPDMSFFVTS 251
>gi|166030602|ref|ZP_02233431.1| hypothetical protein DORFOR_00268 [Dorea formicigenerans ATCC
27755]
gi|166029604|gb|EDR48361.1| hypothetical protein DORFOR_00268 [Dorea formicigenerans ATCC
27755]
Length = 272
Score = 171 bits (434), Expect = 9e-41, Method: Composition-based stats.
Identities = 62/254 (24%), Positives = 113/254 (44%), Gaps = 19/254 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSG+GGL VL + ++PE F+Y AD+ PYG ++ + + + ++ K
Sbjct: 2 KIGIFDSGMGGLSVLHRALRMIPEADFLYYADEEHVPYGEKTREQVRGYIDEIIAFMIKK 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL--STPATL 132
Q VIACNTA ++ E RS FP + +G PA+K+A IL +TP T+
Sbjct: 62 -QVDAIVIACNTATSVATKEYRSQFP-LPIVGMEPAVKKAVEEYADRPGRILVAATPITI 119
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ +L+ + + LV+ L E+ +D++ ++ + +
Sbjct: 120 QGDKLHHLVDRVDKRDMVDLVALPKLVRFAEQ----EIFDQDQVVPYLKEALKDYPLEEY 175
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR-----------INTHQ 241
VL CTH+ ++++ P ++++D ++ R + + + +
Sbjct: 176 KAFVLGCTHFNYFKESYQEIFPNKIEFVDGNEGALRELIRRMEKECDTISVKNGANDAEE 235
Query: 242 TRVFDDHALFLSGK 255
D + SGK
Sbjct: 236 FSKTDRVTYYFSGK 249
>gi|219681899|ref|YP_002468285.1| glutamate racemase [Buchnera aphidicola str. 5A (Acyrthosiphon
pisum)]
gi|257471604|ref|ZP_05635603.1| glutamate racemase [Buchnera aphidicola str. LSR1 (Acyrthosiphon
pisum)]
gi|254766110|sp|B8D9X6|MURI_BUCA5 RecName: Full=Glutamate racemase
gi|219624742|gb|ACL30897.1| glutamate racemase [Buchnera aphidicola str. 5A (Acyrthosiphon
pisum)]
Length = 262
Score = 171 bits (433), Expect = 9e-41, Method: Composition-based stats.
Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 7/239 (2%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
LIFDSG+GGL +L+ ++ ++P H+IY+ D+ FPYGN + + +R + + I Y
Sbjct: 2 LIFDSGVGGLSILKNIKKILPNIHYIYMLDNESFPYGNKTEFFIIQRSIKIIHTIKKIYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
+ VIACNT T+ LR F + G P IK A T++ +I +++T AT+ +Y
Sbjct: 62 INIVVIACNTISTVALSILREKF-DIPIFGIFPHIKAAEKITKNKIIGLIATKATINSSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T I+ Y I ++ + LA E+ G+ + + ++K D I+
Sbjct: 121 TQKTIYEYSCSNTIKIIGTNKLAVIAEKKIRGVAVSQKKLKNIFRPWIN--LPTCPDTII 178
Query: 197 LACTHYPLIVHVFRQLS--PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
L CTH+ L+ + + V ++D+ + + + L N +Q + S
Sbjct: 179 LGCTHFSLLEKEIKNILYKTRSVYFIDSIKKVIFQIKSYLKTSNVNQ--KIKKNIFLYS 235
>gi|212697494|ref|ZP_03305622.1| hypothetical protein ANHYDRO_02064 [Anaerococcus hydrogenalis DSM
7454]
gi|212675493|gb|EEB35100.1| hypothetical protein ANHYDRO_02064 [Anaerococcus hydrogenalis DSM
7454]
Length = 249
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 9/215 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+++ + ++ Y+ D+ PYGN + + K + L K
Sbjct: 4 IGVFDSGLGGLTVLRELSKKH-KANYFYLGDNKNVPYGNRSNEEIIKLSKDIV-RFLIKK 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
VIACNT + ELR F IK+A ++G + +++T AT +
Sbjct: 62 DIDFFVIACNTISVVAIKELRKEFDKKFISITDEGIKEALN--RNGDVFVMATKATCKNH 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+I S+ ++ S L +EE ++I +++ K+ + I
Sbjct: 120 AYKKIIEGRSSK-KVYEKSCPKLVDYIEEGILSG----EKIDSQLKDYLTLANEKKIENI 174
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+L CTHYP+I + + + +D + +AR
Sbjct: 175 ILGCTHYPIIKKTIEKNLTYKANIIDPAKVLARDI 209
>gi|313888088|ref|ZP_07821762.1| glutamate racemase [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845778|gb|EFR33165.1| glutamate racemase [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 276
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 51/250 (20%), Positives = 100/250 (40%), Gaps = 8/250 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
N I +DSG+GGL VL+ + +F++ D + PYG + +K M +
Sbjct: 3 NNVIGFYDSGVGGLSVLKVALNKIKNKNFVFFGDTLRMPYGARTNEEIKNYTMEVMGFF- 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ LS+IACNTA + E + P + A T++ +++++T + +
Sbjct: 62 EDLDVDLSIIACNTATSHGLKESNERYKYPIIGVVEPGSENALERTKTKRVALVATKSCV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
++ S + V L +E +E+ + ++ E
Sbjct: 122 ESGVYDKVLKSMDPSIELRSVYCPDLTLAIERGE----FEEEYMDGIVKKYLDYFEDYDF 177
Query: 193 DVIVLACTHYPLIVHVFRQLS---PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D ++L CTHYPL+ F+++ V +D + A +L +Q
Sbjct: 178 DTMILGCTHYPLVEDSFKRILKKQGKKVLMVDPAYKTVLDAMNILKIEKDNQEIPNRTID 237
Query: 250 LFLSGKPDIA 259
+++G ++
Sbjct: 238 FYITGDINLF 247
>gi|28210023|ref|NP_780967.1| glutamate racemase [Clostridium tetani E88]
gi|28202458|gb|AAO34904.1| glutamate racemase [Clostridium tetani E88]
Length = 266
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 54/247 (21%), Positives = 103/247 (41%), Gaps = 11/247 (4%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I + DSG+GGL +++++ L+P + Y D+ PYGN + + + L
Sbjct: 11 DSVIGVLDSGVGGLTTVKELQELLPNENIYYFGDNKNVPYGNKTQEEIIQFTRNMIE-FL 69
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ +ACNT T+ D++ + P + + + +++T T+
Sbjct: 70 VSQNVKVIAVACNTISTI-IDKISGDYDVKIIKVIDPIVNNIKNIQKKHKVGLIATSFTI 128
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
Y ++ + S LA+ V+ K +D IK IE K +
Sbjct: 129 STKYYDEML----GDVKVIGKGSPELAAIVDSGEINEKEVKDIIKVHIEDI---KSRENV 181
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD-HALF 251
D I+L CTHYP+I H F + P +++L+ + + L +N + + +F
Sbjct: 182 DTIILGCTHYPIIKHFFDECYP-DINFLNPAHQHVIAVKEYLEEMNLLREDNNNKFFKIF 240
Query: 252 LSGKPDI 258
+G +
Sbjct: 241 TTGDKEK 247
>gi|42526956|ref|NP_972054.1| glutamate racemase, putative [Treponema denticola ATCC 35405]
gi|41817271|gb|AAS11965.1| glutamate racemase, putative [Treponema denticola ATCC 35405]
Length = 271
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 67/245 (27%), Positives = 113/245 (46%), Gaps = 7/245 (2%)
Query: 18 IF-DSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+F DSGIGGL L+ ++ L P+ YVAD FPYG + + L I++K +
Sbjct: 10 VFIDSGIGGLPYLRHLKELEPQSSCAYVADTKHFPYGEKTLEDVIEYTEDLVKKIIEKLK 69
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
P + +IACNT LR F + F+G VPAIK AA +++ I++L+T T+ Y
Sbjct: 70 PSVIIIACNTMTVSALSHLRKKF-EIPFVGTVPAIKPAALTSKNKKIAVLATERTVNDIY 128
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
NLI + + C + + +L S++E E++ K I + TD V
Sbjct: 129 VQNLIEEFGADCKFFMRADSVLVSKIENTLLSG--SEEDKKAGIRPAVEFFKSAGTDTAV 186
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA---LFLS 253
L CTH+ + F+ + +D+ D + +A + P + + +++
Sbjct: 187 LGCTHFLHLRDEFKSECEPDIKIVDSLDGVVNQALKISPPQKSKTDEKLKNIQKDIFYIT 246
Query: 254 GKPDI 258
+
Sbjct: 247 SEKTE 251
>gi|311087439|gb|ADP67519.1| glutamate racemase [Buchnera aphidicola str. JF99 (Acyrthosiphon
pisum)]
gi|311087930|gb|ADP68009.1| glutamate racemase [Buchnera aphidicola str. JF98 (Acyrthosiphon
pisum)]
Length = 262
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 66/239 (27%), Positives = 116/239 (48%), Gaps = 7/239 (2%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
LIFDSG+GGL +L+ ++ ++P H+IY+ D+ FPYGN + + +R + + I Y
Sbjct: 2 LIFDSGVGGLSILKNIKKILPNIHYIYMLDNESFPYGNKTEFFIIQRSIKIIHTIKKIYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
+ VIACNT T+ LR F + G P IK A T++ +I +++T AT+ +Y
Sbjct: 62 INIVVIACNTISTVALSILREKF-DIPIFGIFPHIKAAEKITKNKIIGLIATKATINSSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T +I+ Y I ++ + LA E+ G+ + + ++K D I+
Sbjct: 121 TQKIIYEYSCSNTIKIIGTNKLAVIAEKKIRGVAVSQKKLKNIFRPWIN--LPTCPDTII 178
Query: 197 LACTHYPLIVHVFRQLS--PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
L CTH+ L+ + + V ++D+ + + + L N +Q + S
Sbjct: 179 LGCTHFSLLEKEIKNILYKTRSVYFIDSIKKVIFQIKSYLKTSNVNQ--KIKKNIFLYS 235
>gi|27904976|ref|NP_778102.1| glutamate racemase [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
gi|29839498|sp|P59574|MURI_BUCBP RecName: Full=Glutamate racemase
gi|27904374|gb|AAO27207.1| glutamate racemase [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
Length = 263
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 64/255 (25%), Positives = 121/255 (47%), Gaps = 5/255 (1%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
L+N I+IFDS +GGL + ++++ P ++IYV D+ FPYG ++ + KR + + S
Sbjct: 1 MNLKNYIIIFDSSLGGLSIYKQIKKKFPYMNYIYVCDNKNFPYGEKDEIFILKRSIKIIS 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
I K +L ++ACNT L++ F + +G +P + +A T++ +I +L T
Sbjct: 61 TITKKITTILVILACNTITVTSLTTLKNFF-NFPIIGVIPNLNKARKITKNNIIGLLGTK 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ Y N I +V + I L+++ L E+ I IK +E K+
Sbjct: 120 ITIHHYYIQNHISLFVPKYKIKLLANNTLVKIAEQKIKNQLISTKNIKFILEPLL--KKH 177
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI--NTHQTRVFDD 247
D ++L CTH+ + +++ P + +D+ I + +L R T+ F
Sbjct: 178 NMPDTLILGCTHFSFLKEEIKKIFPKKIQIIDSKVHIPKNISTILARNLKTTNNNIAFFS 237
Query: 248 HALFLSGKPDIAMRR 262
+ + +++
Sbjct: 238 KKIITTKTIHYLLKK 252
>gi|167036404|ref|YP_001671635.1| glutamate racemase [Pseudomonas putida GB-1]
gi|166862892|gb|ABZ01300.1| Glutamate racemase [Pseudomonas putida GB-1]
Length = 296
Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats.
Identities = 59/257 (22%), Positives = 118/257 (45%), Gaps = 2/257 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I++ DSG+GGL + +++ L+PE +YV D+ FPYG+ + +R+ L +
Sbjct: 31 KRPIVVLDSGVGGLTLSRQLELLLPEASILYVVDNEWFPYGSKSGAEISQRVQHLIDQLY 90
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ +P+ V+ACNTA +KD + P +++A + I +L+TP T+
Sbjct: 91 TQIRPLAIVVACNTASVAMKDYGLDSCVQH-CFLITPPLEEAVEISDQKNIVLLATPGTV 149
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ Y + ++ +I +++ L + E G K ++ K+
Sbjct: 150 KSRYIRRAMAITRNRANIWPIAAQPLVALSEARLAGQVASFASFTKLVDDHLTTKQRFSI 209
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D ++L CTH+P ++ + P +WLD + +A R + + + ++ +F
Sbjct: 210 DTVILGCTHFPHVIKDLEGIFPSVQNWLDPAKKVALRVASTVKKKHASISQPLKAV-IFT 268
Query: 253 SGKPDIAMRRLMQGFGL 269
S + I R++ G
Sbjct: 269 SKQDIIGYRKVFSKNGF 285
>gi|255020717|ref|ZP_05292777.1| Glutamate racemase [Acidithiobacillus caldus ATCC 51756]
gi|254969833|gb|EET27335.1| Glutamate racemase [Acidithiobacillus caldus ATCC 51756]
Length = 274
Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats.
Identities = 64/257 (24%), Positives = 99/257 (38%), Gaps = 11/257 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL L +P + + D PYG+ + +++ + L
Sbjct: 3 IGVFDSGLGGLSTLLACLRYLPSAEYRFFGDVAHAPYGDKDPQVVRRWTAEAYERFLAA- 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA + LR P + LG PAIK+A +SG I +L+T T+R
Sbjct: 62 GVDAVVLACNTATSAAAAPLREQSP-VPILGLEPAIKKALDV-ESGPILLLATTLTVRGD 119
Query: 136 YTSNLIHSY-VSQCHIHLVSSMILASRVEEYACGIK-IKEDEIKKEIEGCFIEKEGKRTD 193
L+ +Q + V+ L VE + E ++ + F+E K
Sbjct: 120 KLRALLQRMDGAQQRVRAVACPGLMEIVEAQTTDWRAQAESYWRERLLPHFVELRPKG-- 177
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD---HAL 250
+VL CTHY + FR D +D +AR L L
Sbjct: 178 -LVLGCTHYCWLEDAFRDWVGPGCRVYDGNDGLARHLWRRLYGTEAPAPGALPQVARVQL 236
Query: 251 FLSGKPDIAMRRLMQGF 267
S K + ++
Sbjct: 237 EFSAKREEKTQQASAWL 253
>gi|78777751|ref|YP_394066.1| glutamate racemase [Sulfurimonas denitrificans DSM 1251]
gi|78498291|gb|ABB44831.1| glutamate racemase [Sulfurimonas denitrificans DSM 1251]
Length = 247
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 53/257 (20%), Positives = 94/257 (36%), Gaps = 15/257 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ +FDSGIGGL V++ + IY D PYG + + + + +
Sbjct: 3 VGVFDSGIGGLTVVKSLLENKLFEEIIYFGDTARVPYGIKDKSTIIRYAIEAVEFF-KNF 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA---AAYTQSGLISILSTPATL 132
+ L ++ACNT E+R S +G V A A A ++ I IL T AT+
Sbjct: 62 ELDLIIVACNTVSAHALSEMRE-ASSCPVIGVVEAGILATANALKDKNSNILILGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+++ + ++ ++ + VEE +I + +K +
Sbjct: 121 NSKAYEIGLNAEGFK-NLQAKATGLFVPIVEEEIYSGEILDATMKHYFKEIQKP------ 173
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D I+L CTH+PLI + + + D+I + F
Sbjct: 174 DAIILGCTHFPLISDALQSYFSKESILIHSGDAIVEYLEKRFEFSKKY---KETKLEFFA 230
Query: 253 SGKPDIAMRRLMQGFGL 269
S P+ + +
Sbjct: 231 SESPEALKNISKKWLNI 247
>gi|224418377|ref|ZP_03656383.1| glutamate racemase [Helicobacter canadensis MIT 98-5491]
gi|253827696|ref|ZP_04870581.1| glutamate racemase [Helicobacter canadensis MIT 98-5491]
gi|313141908|ref|ZP_07804101.1| glutamate racemase [Helicobacter canadensis MIT 98-5491]
gi|253511102|gb|EES89761.1| glutamate racemase [Helicobacter canadensis MIT 98-5491]
gi|313130939|gb|EFR48556.1| glutamate racemase [Helicobacter canadensis MIT 98-5491]
Length = 259
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 49/262 (18%), Positives = 92/262 (35%), Gaps = 18/262 (6%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG+ VL + IY D PYG + + +
Sbjct: 4 KKIGLFDSGVGGISVLGNLINSKTFEEIIYYGDTARVPYGTRSKETIIQYSLEALDFF-K 62
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--AYTQSGLISILSTPAT 131
+++ L V+ACNT + ++ P + + I +L T AT
Sbjct: 63 QFKLDLLVVACNTISAYGLEAMQKATNYPIIGVIEPGVLALTNNLQNKDSKILVLGTKAT 122
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ L+ + C I+ +++ + VEE G KI E ++ + ++
Sbjct: 123 IQSQLYQTLLENQGYSC-INSLATSLFVPLVEEGIFGGKILESVMEYYFQDY-----TEK 176
Query: 192 TDVIVLACTHYPLIVHVFRQLS------PWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
D I+L CTH+PLI P + + +I + + + +
Sbjct: 177 PDAIILGCTHFPLISKTIAHYFQNKFPTPNKPILIHSGIAIMEYLK---AKYTLQKPSIA 233
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
+ S + +
Sbjct: 234 SKVTFYASDNLEKLKKTADLWL 255
>gi|223038331|ref|ZP_03608625.1| glutamate racemase [Campylobacter rectus RM3267]
gi|222880188|gb|EEF15275.1| glutamate racemase [Campylobacter rectus RM3267]
Length = 519
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 64/236 (27%), Positives = 95/236 (40%), Gaps = 10/236 (4%)
Query: 5 NYPCEKKLQN--SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
N L I FDSGIGGL VL + F+Y AD+ PYG + +
Sbjct: 4 NLFLNLTLDKDLKIAFFDSGIGGLSVLAEALGRFSGAEFLYFADEDHVPYGTKSRAEIVR 63
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+ L + VIACNTA + ELRS F S+ +G PA+K AA S
Sbjct: 64 LSLDAVG-FLVSHGAEAVVIACNTATSAAISELRSAF-SVPIIGMEPAVKLAADRFGSRP 121
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+++TP T+ + L+ +C I + L ++ ++ ++G
Sbjct: 122 TLLIATPLTIAGEKLARLV--GRLECEIWSLPLPRLVEFA----QDLEFDSPAVRTYLQG 175
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+ E R +VL CTH+ V R++ P V +D D R L
Sbjct: 176 ELGKFELARLGSLVLGCTHFNYFKDVLREILPPHVRIIDGIDGTLNRLVSELAARG 231
>gi|194477143|ref|YP_002049322.1| Glutamate racemase [Paulinella chromatophora]
gi|171192150|gb|ACB43112.1| Glutamate racemase [Paulinella chromatophora]
Length = 272
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 54/263 (20%), Positives = 101/263 (38%), Gaps = 16/263 (6%)
Query: 12 LQN-SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ + +FDSG+GGL VL ++ P + +IY+ D PYG ++ S
Sbjct: 1 MSRLKLGLFDSGVGGLTVLHQVLKRHPNHSYIYLGDTARVPYGERNPREIRSIAGEAIS- 59
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L Q ++ACNT L D + A + ++ + +LST A
Sbjct: 60 WLRNQQVDALIMACNTTNALAYDIALKISGVPVYGLIDSAARCI----RAKRVGVLSTAA 115
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T + IH Y SQ + + +E ++ ++
Sbjct: 116 TAASRAYTLQIHRYSSQTQVIEQACPAFVPLIEI----GNFQDPRLRIAANLYLAPLLAA 171
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP------RINTHQTRV 244
++I+L CTHYPL+ + RQL P + LD + ++++R LL + + ++
Sbjct: 172 NVEIIMLGCTHYPLLEPLLRQLLPSHIQLLDPARALSKRLDQLLGIPKRTVHNSINSSKD 231
Query: 245 FDDHALFLSGKPDIAMRRLMQGF 267
++ + + +
Sbjct: 232 LAVCRFCVTAASETFAKAAINFI 254
>gi|288921254|ref|ZP_06415538.1| glutamate racemase [Frankia sp. EUN1f]
gi|288347344|gb|EFC81637.1| glutamate racemase [Frankia sp. EUN1f]
Length = 277
Score = 169 bits (428), Expect = 5e-40, Method: Composition-based stats.
Identities = 54/254 (21%), Positives = 95/254 (37%), Gaps = 9/254 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG V + + +P +++ + PYG ++ + +
Sbjct: 5 PIGVFDSGVGGRTVARAIGDRLPARPLLHLGETANAPYGPQPGAEVRPPAPAVLDQPVAA 64
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L VIA N+A + R + VP +A A T+SG + ++ T AT
Sbjct: 65 -GVKLLVIAGNSAGAACLRDARERYDVPVVEVIVPTTCRAVAATRSGRVGVVGTVATNAS 123
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + S + V+ + V E + E+ E + D
Sbjct: 124 RAYEDAFSA-ASGTELVSVACPAFGAFVVEGITSGR----ELLGLTEAYRAPLQEADVDT 178
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFDDHALFL 252
++L CT YPL+ V + V + +++ + +L R + H L
Sbjct: 179 VILGCTRYPLLTGVTGLVPGEGVTLVRSAEETSEATDRVLARDGRFRDPDLPPPAHRLPA 238
Query: 253 SGKPDIA-MRRLMQ 265
G P + RRL Q
Sbjct: 239 PGAPAASRTRRLRQ 252
>gi|15617147|ref|NP_240360.1| glutamate racemase [Buchnera aphidicola str. APS (Acyrthosiphon
pisum)]
gi|11386924|sp|P57619|MURI_BUCAI RecName: Full=Glutamate racemase
gi|25291667|pir||F84994 glutamate racemase (EC 5.1.1.3) [imported] - Buchnera sp. (strain
APS)
gi|10039212|dbj|BAB13246.1| glutamate racemase [Buchnera aphidicola str. APS (Acyrthosiphon
pisum)]
Length = 262
Score = 168 bits (427), Expect = 6e-40, Method: Composition-based stats.
Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 7/239 (2%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
LIFDSG+GGL +L+ ++ ++P H+IY+ D+ FPYGN + + +R + + I Y
Sbjct: 2 LIFDSGVGGLSILKNIKKILPNIHYIYMLDNESFPYGNKTEFFIIQRSIKIIHTIKKIYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
+ VIACNT T+ LR F + G P IK A T++ +I +++T AT+ +Y
Sbjct: 62 INVVVIACNTISTVALSILRKKF-DIPIFGIFPHIKAAEKITKNKIIGLIATKATINSSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T +I+ Y I ++ + LA E+ G+ + + ++K D I+
Sbjct: 121 TQKIIYEYSCSNTIKIIGTNKLAVIAEKKIRGVAVSQKKLKNIFRPWIN--LPTCPDTII 178
Query: 197 LACTHYPLIVHVFRQLS--PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
L CTH+ L+ + + V ++D+ + + L N +Q + S
Sbjct: 179 LGCTHFSLLEKEIKNILYKTRSVYFIDSIKKVIFQIESYLKTSNVNQ--KIKKNIFLYS 235
>gi|89054829|ref|YP_510280.1| glutamate racemase [Jannaschia sp. CCS1]
gi|122498526|sp|Q28PV7|MURI_JANSC RecName: Full=Glutamate racemase
gi|88864378|gb|ABD55255.1| glutamate racemase [Jannaschia sp. CCS1]
Length = 270
Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats.
Identities = 51/266 (19%), Positives = 90/266 (33%), Gaps = 20/266 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL VL + +P+ IY+ D+ PYG E + L
Sbjct: 2 AVGIFDSGLGGLTVLDAVTKALPDVPLIYMGDNAHTPYGVREADDIYDLTTAGV-QHLFD 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF--PSMAFLGAVPAIKQAAAYTQS-----------G 121
L ++ACNTA ++ + LG + +A Q
Sbjct: 61 RGCDLVILACNTASAAALRRMQEGWVPEGKRVLGVFVPLIEALTERQWGDNSPPREVDVK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++ +TP T+ + + + +E+ + + E ++ ++
Sbjct: 121 EVALFATPTTVSSRAFQRELAFRAIGVDVEAQPCGGVVDAIEDG--DMILAEALVRSHVD 178
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
++ +L CTHYPL+ VFR V +A L R
Sbjct: 179 AL--KRRMPNPQAAILGCTHYPLVEDVFRAALGDGVAVFSQPSLVADSLGDYLKRRPEML 236
Query: 242 TRVFDDHALFLSGKPDIAMRRLMQGF 267
A +G P +
Sbjct: 237 GSGEP--AFLTTGDPKSVEAKATIFL 260
>gi|219682454|ref|YP_002468838.1| glutamate racemase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
pisum)]
gi|254766111|sp|B8D878|MURI_BUCAT RecName: Full=Glutamate racemase
gi|219622187|gb|ACL30343.1| glutamate racemase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon
pisum)]
gi|311086275|gb|ADP66357.1| glutamate racemase [Buchnera aphidicola str. LL01 (Acyrthosiphon
pisum)]
Length = 262
Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats.
Identities = 66/239 (27%), Positives = 116/239 (48%), Gaps = 7/239 (2%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
LIFDSG+GGL +L+ ++ ++P H+IY+ D+ FPYGN + + +R + + I Y
Sbjct: 2 LIFDSGVGGLSILKNIKKILPNIHYIYMLDNESFPYGNKTEFFIIQRSIKIIHTIKKIYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
+ VIACNT T+ LR F + G P IK A T++ +I +++T AT+ +Y
Sbjct: 62 INIVVIACNTISTVALSILREKF-DIPIFGIFPHIKAAEKITKNKIIGLIATKATINSSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T +I+ Y I ++ + LA E+ G+ + + ++K D I+
Sbjct: 121 TQKIIYEYSCSNTIKIIGTNKLAVIAEKKIRGVAVSQKKLKNIFRPWIN--LPTCPDTII 178
Query: 197 LACTHYPLIVHVFRQLS--PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
L CTH+ L+ + + V ++D+ + + + L N +Q + S
Sbjct: 179 LGCTHFSLLEKEIKNILYKTRSVYFIDSIKKVIFQIKSCLKTSNVNQ--KIKKNIFLYS 235
>gi|91228520|ref|ZP_01262441.1| glutamate racemase [Vibrio alginolyticus 12G01]
gi|91187896|gb|EAS74207.1| glutamate racemase [Vibrio alginolyticus 12G01]
Length = 204
Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats.
Identities = 72/206 (34%), Positives = 110/206 (53%), Gaps = 7/206 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L+FDSG+GGL V Q++ L+P+ ++Y+ D+ +PYG + L R+ L S ++
Sbjct: 6 KKKVLVFDSGVGGLSVFQEIHRLLPQLDYLYLFDNQAYPYGELDQAVLVSRVNQLVSSLV 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+++Q + VIACNTA T++ LR S+ +G VPAIK A+ S + +++TPAT+
Sbjct: 66 EEHQVDIVVIACNTASTIVLPSLRENL-SIPVVGVVPAIKPASLL-ASKGVGLIATPATV 123
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R YT LI + + L+ S L EE G + DE+ K + K
Sbjct: 124 TRQYTHELIRDFAQGKPVELLGSTRLVDMAEEKLRGNSVSLDELTKI----LLPLRDK-V 178
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD 218
DV VL CTH+PLI Q V
Sbjct: 179 DVAVLGCTHFPLIKEEIHQALGGDVT 204
>gi|94676801|ref|YP_588621.1| glutamate racemase [Baumannia cicadellinicola str. Hc (Homalodisca
coagulata)]
gi|94219951|gb|ABF14110.1| glutamate racemase [Baumannia cicadellinicola str. Hc (Homalodisca
coagulata)]
Length = 274
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 69/232 (29%), Positives = 117/232 (50%), Gaps = 2/232 (0%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+ILI DSG+GGL + +++ ++P +++YV D+ FPYG + RL+ + + +
Sbjct: 9 PTILIVDSGVGGLSIFYQIKKIIPNANYLYVFDNEAFPYGEKTKRFIINRLIIIINAVRK 68
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L +IACNTA L LR F +G +PAIK A T S +I +L+T AT+
Sbjct: 69 LHYVDLIIIACNTASILALKALRQYF-FYPIIGVLPAIKLATTITNSKVIGLLATTATIN 127
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
Y +N I++Y I + + L + VE G KI +++ + + + D
Sbjct: 128 SKYITNSINNYKKSYKIISLKAPELVNLVEAKLHGEKISLLSLREILFPWLKTSQTYKLD 187
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
I+L CTH+PLI + + P + +D ++A R LL + + +
Sbjct: 188 TIILGCTHFPLIYEELKLILPTSIKIIDAHQTVANRV-FLLSKKFINSNQSS 238
>gi|311086850|gb|ADP66931.1| glutamate racemase [Buchnera aphidicola str. TLW03 (Acyrthosiphon
pisum)]
Length = 262
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 66/239 (27%), Positives = 116/239 (48%), Gaps = 7/239 (2%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
LIFDSG+GGL +L+ ++ ++P H+IY+ D+ FPYGN + + +R + + I Y
Sbjct: 2 LIFDSGVGGLSILKNIKKILPNIHYIYMLDNESFPYGNKTEFFIIQRSIKIIHTIKKIYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
+ VIACNT T+ LR F + G P IK A T++ +I +++T AT+ +Y
Sbjct: 62 INIVVIACNTISTVALSILREKF-DIPIFGIFPHIKAAEKITKNKIIGLIATKATINSSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T +I+ Y I ++ + LA E+ G+ + + ++K D I+
Sbjct: 121 TQKIIYEYSYSNTIKIIGTNKLAVIAEKKIRGVAVSQKKLKNIFRPWIN--LPTCPDTII 178
Query: 197 LACTHYPLIVHVFRQLS--PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
L CTH+ L+ + + V ++D+ + + + L N +Q + S
Sbjct: 179 LGCTHFSLLEKEIKNILYKTRSVYFIDSIKKVIFQIKSCLKTSNVNQ--KIKKNIFLYS 235
>gi|167467898|ref|ZP_02332602.1| glutamate racemase [Yersinia pestis FV-1]
Length = 198
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 61/179 (34%), Positives = 100/179 (55%), Gaps = 1/179 (0%)
Query: 8 CEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ + + LIFDSG+GGL V Q++R L+P+ H+IY D+V FPYG + +R++ +
Sbjct: 20 ADSPPRPTALIFDSGVGGLSVYQEIRQLLPDLHYIYAFDNVAFPYGEKSGEFIVERVLEI 79
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ + ++ + VIACNTA T+ LR F + +G VPAIK A T++G++ +L+
Sbjct: 80 VTAVQQRHPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLLA 138
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T AT+ +YT +LI + + C I L+ S L E G + + +KK +
Sbjct: 139 TRATVHASYTLDLIARFATDCKIELLGSSELVEVAETKLHGGVVPLEVLKKILHPWLSM 197
>gi|317181866|dbj|BAJ59650.1| glutamate racemase [Helicobacter pylori F57]
Length = 255
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 48/262 (18%), Positives = 93/262 (35%), Gaps = 19/262 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + IY D PYG + +++ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFNE-IIYYGDSARVPYGTKDPTTIRQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
++ L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNASILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-----ELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVF 245
+V++L CTH+PLI H + + D+I + F
Sbjct: 174 PEVVILGCTHFPLIAHQIEGYFMKHFTLSTPPLLIHSGDAIVEYLQQ--KYALKKNACAF 231
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 232 PKVEFHASGDVVWLEKQAKEWL 253
>gi|317010769|gb|ADU84516.1| glutamate racemase [Helicobacter pylori SouthAfrica7]
Length = 255
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 51/263 (19%), Positives = 98/263 (37%), Gaps = 21/263 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKVQLFDE-IIYYGDSARVPYGTKDPATIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP---AIKQAAAYTQSGLISILSTPA 130
++ L ++ACNTA L +E++ P AIKQ ++ I +L T A
Sbjct: 60 PHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQHVK-NKNTPILVLGTKA 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++ + N + ++ +++ + +EE + ++ + F +
Sbjct: 119 TIQSSAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG----ELLETCMRYYFAPLKI- 172
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRV 244
+V++L CTH+PLI + + D+I +
Sbjct: 173 VPEVVILGCTHFPLIAQKIESYFMEHFIPSKTPLLIHSGDAIVEYLQQ--KYALKKNAYA 230
Query: 245 FDDHALFLSGKPDIAMRRLMQGF 267
F SG ++ +
Sbjct: 231 FPKVEFHASGDVVWLEKQAKEWL 253
>gi|255321691|ref|ZP_05362846.1| glutamate racemase [Campylobacter showae RM3277]
gi|255301171|gb|EET80433.1| glutamate racemase [Campylobacter showae RM3277]
Length = 327
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 59/234 (25%), Positives = 91/234 (38%), Gaps = 10/234 (4%)
Query: 5 NYPCEKKLQN--SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
N L I FDSGIGGL VL + F+Y AD+ PYG + +
Sbjct: 4 NLFLNLTLDKDLKIAFFDSGIGGLSVLAEALRRFSGAEFLYFADEDHVPYGTKSRAEIVR 63
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
+ L V+ACNTA + ELR F S+ +G PA+K AA +
Sbjct: 64 LSLDAVG-FLVSRGADGVVVACNTATSAAISELRGAF-SVPVIGMEPAVKLAADSFGARP 121
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+++TP T+ + L+ +C + L ++ ++ +
Sbjct: 122 TLLIATPLTIAGEKLARLV--GRLECETWSLPLPRLVEFA----QDLEFDSPAVRAYLRE 175
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
+ E +R +VL CTH+ V R++ P V +D D R L
Sbjct: 176 ELAKFELERLGSLVLGCTHFNYFKDVLREILPSHVRIIDGIDGTLNRLASELGE 229
>gi|24113787|ref|NP_708297.1| glutamate racemase [Shigella flexneri 2a str. 301]
gi|24052869|gb|AAN44004.1| similar to glutamate racemase [Shigella flexneri 2a str. 301]
gi|281601863|gb|ADA74847.1| glutamate racemase [Shigella flexneri 2002017]
gi|332766260|gb|EGJ96470.1| glutamate racemase [Shigella flexneri 2930-71]
Length = 273
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 58/266 (21%), Positives = 110/266 (41%), Gaps = 12/266 (4%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M+++ + E I + DSG+GGL ++++ L+P IY D++ PYGN +
Sbjct: 1 MRLNMFSAES----PIGVIDSGVGGLTSVKEIINLLPGEDIIYCGDNMNAPYGNRSADDI 56
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS---MAFLGAVPAIKQAAAY 117
+ + L L +ACNT + ++ E S + L + +
Sbjct: 57 ISLTKKMLT-FLQSRNVKLVAVACNTISSTLESEEYSGYAKSFPFPILSIIEPAVEDVIR 115
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
Q + I++T T++ LI S ++ S LA +EE ++IK
Sbjct: 116 QQYKNVGIIATEFTIKTGCHKELIKKLNSTINVFGEPSKNLAMLIEEGNLNAPAILNDIK 175
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237
K + + I+L CTHYP++ + F ++P + +++ + A + L ++
Sbjct: 176 KHVNHLIS---LHPVNEIILGCTHYPIVQNFFEAVAPD-IKFINPAHDQAISIKNHLGQL 231
Query: 238 NTHQTRVFDDHALFLSGKPDIAMRRL 263
N + + SG +I L
Sbjct: 232 NLLNSSNIGTLQINTSGSMEIYKTVL 257
>gi|307292858|ref|ZP_07572704.1| glutamate racemase [Sphingobium chlorophenolicum L-1]
gi|306880924|gb|EFN12140.1| glutamate racemase [Sphingobium chlorophenolicum L-1]
Length = 267
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 78/238 (32%), Positives = 120/238 (50%), Gaps = 2/238 (0%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+L FDSG+GGL +L + +P+ +Y AD GFPYG + + R+ L ++++
Sbjct: 8 PLLFFDSGVGGLSILAPAQAALPQAPVVYAADSAGFPYGTRSEADIAARVPALLGRLVER 67
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
Y+P L+VIACNTA T+ +R+ + +G VPAIK AA +QS + +L T AT+R+
Sbjct: 68 YRPRLAVIACNTASTIALSAVRAAL-DIPVVGTVPAIKPAALLSQSRVFGVLGTDATVRQ 126
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y L Y S C + S L E G + + + G + G R D+
Sbjct: 127 PYVDRLAAEYGSDCTVLRHGSAALVQLAEAKLRGEPLDPAIARDALAGLLDQPGGDRMDI 186
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
+VLACTH+PL+ SP P+ ++ + IARR L + + A+F
Sbjct: 187 VVLACTHFPLVEAELAAASPRPLRFVHGGEGIARRIA-YLTQGQPWPSEPLPGTAVFT 243
>gi|322379012|ref|ZP_08053415.1| glutamate racemase [Helicobacter suis HS1]
gi|322380777|ref|ZP_08054883.1| glutamate racemase [Helicobacter suis HS5]
gi|321146781|gb|EFX41575.1| glutamate racemase [Helicobacter suis HS5]
gi|321148504|gb|EFX43001.1| glutamate racemase [Helicobacter suis HS1]
Length = 260
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 49/253 (19%), Positives = 100/253 (39%), Gaps = 15/253 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ +FDSG+GGL VL+ + H IY D PYG + ++K + Y
Sbjct: 12 VGVFDSGVGGLSVLESLLKARLFEHIIYYGDTARVPYGPKDPATIQKFSLEALDFF-KPY 70
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT-QSGLISILSTPATLRR 134
Q + ++ACN+ ++R+ + T Q I IL T AT+
Sbjct: 71 QIDMLIVACNSVSAWALPQMRNQSKMPIVGVIEAGVLSVLKKTSQEQPILILGTKATIAS 130
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + ++ + ++ +++ + +EE + ++ + F + + V
Sbjct: 131 NRYAKELGAHGYK-NVQSLATGLFVPLIEEGVLEGPL----LEACMVHYFKDLKCA-PSV 184
Query: 195 IVLACTHYPL----IVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
+VL CTH+P + F + P +++ + ++I + + N + L
Sbjct: 185 VVLGCTHFPWIVSSLKGYFLERFKTPCEFVHSGEAIVEYLQ---EKYNLLSRNQESNLEL 241
Query: 251 FLSGKPDIAMRRL 263
F SG + +
Sbjct: 242 FASGDVSLLKQLA 254
>gi|315453056|ref|YP_004073326.1| glutamate racemase [Helicobacter felis ATCC 49179]
gi|315132108|emb|CBY82736.1| glutamate racemase [Helicobacter felis ATCC 49179]
Length = 252
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 47/258 (18%), Positives = 89/258 (34%), Gaps = 16/258 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ IFDSG+GGL VL+ + IY D PYG + ++ + Y
Sbjct: 3 VGIFDSGVGGLSVLKSVLQARLFAEIIYYGDTARVPYGPKDKATIEHFALEALEFF-KPY 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY--TQSGLISILSTPATLR 133
Q + ++ACNT L +++R+ I + I +L T AT+
Sbjct: 62 QIEMLIVACNTVSALALEKMRAHSSIPIVGVIEAGILATIQQFPNKHTPILVLGTRATIA 121
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + ++ ++ +++ + +EE + + + E
Sbjct: 122 SGQYAQHLSAHGY-SNVQSLATGLFVPLIEEGVLEG-----ALLRACMQHYFENIQNAPT 175
Query: 194 VIVLACTHYPLIVHVFRQL----SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
V++L CTH+PLI + P + + D+I + +
Sbjct: 176 VLILGCTHFPLIASSLQNYFQTRFNHPCALVHSGDAIVHYLQ---DTHHLIPLNHPPQVR 232
Query: 250 LFLSGKPDIAMRRLMQGF 267
F SG +
Sbjct: 233 FFASGDVKTLKVQAKAWL 250
>gi|217033496|ref|ZP_03438925.1| hypothetical protein HP9810_905g15 [Helicobacter pylori 98-10]
gi|216944021|gb|EEC23452.1| hypothetical protein HP9810_905g15 [Helicobacter pylori 98-10]
Length = 255
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 50/262 (19%), Positives = 94/262 (35%), Gaps = 19/262 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKVQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
++ L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R N + ++ +++ + +EE E+ + +
Sbjct: 120 IRSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-----ELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVF 245
+V++L CTH+PLI H + + D+I + F
Sbjct: 174 PEVVILGCTHFPLIAHQIESYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACTF 231
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 232 PKVEFHASGDVVWLEKQAKEWL 253
>gi|313650908|gb|EFS15308.1| glutamate racemase [Shigella flexneri 2a str. 2457T]
gi|332755494|gb|EGJ85858.1| glutamate racemase [Shigella flexneri K-671]
gi|333001965|gb|EGK21531.1| glutamate racemase [Shigella flexneri K-218]
Length = 269
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 56/254 (22%), Positives = 106/254 (41%), Gaps = 8/254 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ I + DSG+GGL ++++ L+P IY D++ PYGN + + + L
Sbjct: 5 ESPIGVIDSGVGGLTSVKEIINLLPGEDIIYCGDNMNAPYGNRSADDIISLTKKMLT-FL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPS---MAFLGAVPAIKQAAAYTQSGLISILSTP 129
L +ACNT + ++ E S + L + + Q + I++T
Sbjct: 64 QSRNVKLVAVACNTISSTLESEEYSGYAKSFPFPILSIIEPAVEDVIRQQYKNVGIIATE 123
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ LI S ++ S LA +EE ++IKK +
Sbjct: 124 FTIKTGCHKELIKKLNSTINVFGEPSKNLAMLIEEGNLNAPAILNDIKKHVNHLIS---L 180
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+ I+L CTHYP++ + F ++P + +++ + A + L ++N +
Sbjct: 181 HPVNEIILGCTHYPIVQNFFEAVAP-DIKFINPAHDQAISIKNHLGQLNLLNSSNIGTLQ 239
Query: 250 LFLSGKPDIAMRRL 263
+ SG +I L
Sbjct: 240 INTSGSMEIYKTVL 253
>gi|46091551|dbj|BAD13991.1| HP0549 [Helicobacter pylori]
Length = 255
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 49/262 (18%), Positives = 94/262 (35%), Gaps = 19/262 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + +Y D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKVQLFDE-IVYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-----ELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVF 245
+V++L CTH+PLI H + + D+I + F
Sbjct: 174 PEVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYTLKKNACAF 231
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 232 PKVEFHASGDVVWLEKQAKEWL 253
>gi|333001587|gb|EGK21155.1| glutamate racemase [Shigella flexneri VA-6]
Length = 269
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 56/254 (22%), Positives = 106/254 (41%), Gaps = 8/254 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ I + DSG+GGL ++++ L+P IY D++ PYGN + + + L
Sbjct: 5 ESPIGVIDSGVGGLTSVKEIINLLPGEDIIYCGDNMNAPYGNRSADDIISLTKKMLT-FL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPS---MAFLGAVPAIKQAAAYTQSGLISILSTP 129
L +ACNT + ++ E S + L + + Q + I++T
Sbjct: 64 QSRNVKLVAVACNTISSTLESEKYSGYAKSFPFPILSIIEPAVEDVIRQQYKNVGIIATE 123
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ LI S ++ S LA +EE ++IKK +
Sbjct: 124 FTIKTGCHKELIKKLNSTINVFGEPSKNLAMLIEEGNLNAPAILNDIKKHVNHLIS---L 180
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+ I+L CTHYP++ + F ++P + +++ + A + L ++N +
Sbjct: 181 HPVNEIILGCTHYPIVQNFFEAVAP-DIKFINPAHDQAISIKNHLGQLNLLNSSNIGTLQ 239
Query: 250 LFLSGKPDIAMRRL 263
+ SG +I L
Sbjct: 240 INTSGSMEIYKTVL 253
>gi|307637232|gb|ADN79682.1| glutamate racemase [Helicobacter pylori 908]
gi|325995823|gb|ADZ51228.1| Glutamate racemase [Helicobacter pylori 2018]
gi|325997417|gb|ADZ49625.1| Glutamate racemase [Helicobacter pylori 2017]
Length = 255
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 52/261 (19%), Positives = 95/261 (36%), Gaps = 17/261 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
+Q L ++ACNTA L +E++ P+I ++ I +L T AT+
Sbjct: 61 HQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE + ++ + F +
Sbjct: 121 QSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-LP 174
Query: 193 DVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+VI+L CTH+PLI P P + + D+I + F
Sbjct: 175 EVIILGCTHFPLIAQKIESYFMGHFALPTPPLLIHSGDAIVEYLQQ--KYALKKNAHAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVIWLEKQAKEWL 253
>gi|261886270|ref|ZP_06010309.1| glutamate racemase [Campylobacter fetus subsp. venerealis str.
Azul-94]
Length = 242
Score = 165 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 63/248 (25%), Positives = 101/248 (40%), Gaps = 10/248 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSGIGGL +L + FIY AD+ PYG + + + L
Sbjct: 2 KIAIFDSGIGGLSLLNEALKRFRGVEFIYFADNKNAPYGTKSKDEIIRLCLNCV-QFLTN 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ VIACNTA + ELRS+F S+ +G PA+K G I +++TPAT+
Sbjct: 61 LSVDMIVIACNTATSAAITELRSSF-SVPIIGMEPAVKLGVNA--GGDILVVATPATISG 117
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
S+LIH + HL++ L ++ E+ K ++ + + +
Sbjct: 118 NKLSDLIHKVNLESKTHLLALPKLVEFA----QNMEFDSLEVLKYLKDEISKFDLSNISL 173
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VL CTH+ FR + P +D + + L + + S
Sbjct: 174 LVLGCTHFNYFKDSFRAILPNKTGIIDGVNGTINQMIRRLG--GVSEFGDKNSIRYISST 231
Query: 255 KPDIAMRR 262
+ +
Sbjct: 232 ENLNVKKI 239
>gi|256544593|ref|ZP_05471965.1| glutamate racemase [Anaerococcus vaginalis ATCC 51170]
gi|256399482|gb|EEU13087.1| glutamate racemase [Anaerococcus vaginalis ATCC 51170]
Length = 249
Score = 165 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 57/255 (22%), Positives = 109/255 (42%), Gaps = 17/255 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+++ + ++ Y+ D+ PYG+ + + + + L K
Sbjct: 4 IGVFDSGLGGLTVLKELSKKH-KANYFYLGDNKNVPYGDKSNEEIIELSKKIV-KFLLKK 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
VIACNT T+ + LR F AIK++ G I +++T AT +
Sbjct: 62 DIDFFVIACNTISTVAIEYLRKEFDKKFISITDQAIKKSLEC--EGDIFVMATKATCLQH 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
I S + + +L S +E+ +K D + K ++ K+ + I
Sbjct: 120 TYKIKIEE-NSNKKVFEKACPLLVSLIEKGI----VKGDVLDKALKDYLELANEKKIENI 174
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VL CTHYP++ + + + +D ++ +A+ + ++++
Sbjct: 175 VLGCTHYPIVEDEIFKNLNYKANIIDPANVLAQNIK--------FDENEKKYIEIYMTDV 226
Query: 256 PDIAMRRLMQGFGLK 270
+I+ + G K
Sbjct: 227 NEISQEMTNKIMGEK 241
>gi|118475058|ref|YP_891779.1| glutamate racemase [Campylobacter fetus subsp. fetus 82-40]
gi|166231031|sp|A0RNJ6|MURI_CAMFF RecName: Full=Glutamate racemase
gi|118414284|gb|ABK82704.1| glutamate racemase [Campylobacter fetus subsp. fetus 82-40]
Length = 253
Score = 165 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 63/248 (25%), Positives = 101/248 (40%), Gaps = 10/248 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I IFDSGIGGL +L + FIY AD+ PYG + + + L
Sbjct: 2 KIAIFDSGIGGLSLLNEALKRFRGVEFIYFADNKNAPYGTKSKDEIIRLCLNCV-QFLTN 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ VIACNTA + ELRS+F S+ +G PA+K G I +++TPAT+
Sbjct: 61 LSVDMIVIACNTATSAAITELRSSF-SVPIIGMEPAVKLGVNA--GGDILVVATPATISG 117
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
S+LIH + HL++ L ++ E+ K ++ + + +
Sbjct: 118 NKLSDLIHKVNLESKTHLLALPKLVEFA----QNMEFDSLEVLKYLKDEISKFDLSNISL 173
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VL CTH+ FR + P +D + + L + + S
Sbjct: 174 LVLGCTHFNYFKDSFRAILPNKTGIIDGVNGTINQMIRRLG--GVSEFGDKNSIRYISST 231
Query: 255 KPDIAMRR 262
+ +
Sbjct: 232 ENLNVKKI 239
>gi|127663934|gb|ABO28649.1| glutamate recemase [Helicobacter pylori]
Length = 255
Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats.
Identities = 52/261 (19%), Positives = 95/261 (36%), Gaps = 17/261 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
+Q L ++ACNTA L +E++ P+I ++ I +L T AT+
Sbjct: 61 HQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE + ++ + F +
Sbjct: 121 QSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-LP 174
Query: 193 DVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+VI+L CTH+PLI P P + + D+I + F
Sbjct: 175 EVIILGCTHFPLIAQKIESYFMGHFALPTPPLLIHSGDAIVEYLQQ--KYALRKNACTFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVIWLEKQAKEWL 253
>gi|217077581|ref|YP_002335299.1| glutamate racemase [Thermosipho africanus TCF52B]
gi|217037436|gb|ACJ75958.1| glutamate racemase [Thermosipho africanus TCF52B]
Length = 263
Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats.
Identities = 52/251 (20%), Positives = 103/251 (41%), Gaps = 22/251 (8%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSGIGG+ VL+K+ ++ H+IY+AD PYG L+ + F++ K
Sbjct: 2 KIGLFDSGIGGISVLKKLTYIN-GAHYIYIADTERAPYGIKTPEVLESFIFE-FAEFFHK 59
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
ACNT ++ L ++ IK A +S + ++ T T+
Sbjct: 60 KGVNEIFAACNTTDSI---ILEKNLDLGIKYNSI--IKAAIQAPKSEKVGVIGTNITVSN 114
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ ++ S+ + S VEE ++ E + + K +
Sbjct: 115 GIYKKYLEM--ENKEVYQKSTQLFVSLVEEGIFYGRMVEAIANY----YLLPLKKKNIEE 168
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
++L CTH+P + V ++ P V +D ++ ++++ +++G
Sbjct: 169 LILGCTHFPFLKGVISRVLPK-VRIIDPAEELSKKLAK--------NNSKKAFVEFYVTG 219
Query: 255 KPDIAMRRLMQ 265
P + ++L +
Sbjct: 220 DPKVFEKKLKR 230
>gi|127663966|gb|ABO28671.1| glutamate recemase [Helicobacter pylori]
Length = 255
Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats.
Identities = 52/261 (19%), Positives = 95/261 (36%), Gaps = 17/261 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
+Q L ++ACNTA L +E++ P+I ++ I +L T AT+
Sbjct: 61 HQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE + ++ + F +
Sbjct: 121 QSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-LP 174
Query: 193 DVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+VI+L CTH+PLI P P + + D+I + F
Sbjct: 175 EVIILGCTHFPLIAQKIESYFMGHFALPTPPLLIHSGDAIVEYLQQ--KYSLRENACTFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVIWVEKQAKEWL 253
>gi|190014952|ref|YP_001965464.1| Putative glutamate racemase [Escherichia coli]
gi|109389673|gb|ABG29592.1| Putative glutamate racemase [Escherichia coli]
Length = 273
Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats.
Identities = 58/266 (21%), Positives = 109/266 (40%), Gaps = 12/266 (4%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M+++ + E I + DSG+GGL ++++ L+P IY D+ PYGN +
Sbjct: 1 MRLNMFSAES----PIGVIDSGVGGLTSVKEIINLLPGEDIIYCGDNTNAPYGNRSADDI 56
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS---MAFLGAVPAIKQAAAY 117
+ + L L +ACNT + ++ E S + L + +
Sbjct: 57 ISLTKKMLT-FLQSRNVKLVAVACNTISSTLESEEYSGYAKSFPFPILSIIEPAVEDVIR 115
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
Q + I++T T++ LI +I S LA +EE ++IK
Sbjct: 116 QQYKNVGIIATEFTIKTGCHKELIKKLNPTINIFGEPSKNLAMLIEEGNLNAPAILNDIK 175
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237
K + + I+L CTHYP++ ++F ++P + +++ + A + L ++
Sbjct: 176 KHVNHLIS---LHPVNEIILGCTHYPIVQNLFEAVAP-DIKFINPAHDQAISIKNHLGQL 231
Query: 238 NTHQTRVFDDHALFLSGKPDIAMRRL 263
N + + SG +I L
Sbjct: 232 NLLNSSNIGTLQINTSGSMEIYKTVL 257
>gi|317009473|gb|ADU80053.1| glutamate racemase [Helicobacter pylori India7]
Length = 255
Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats.
Identities = 50/262 (19%), Positives = 94/262 (35%), Gaps = 19/262 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-----ELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVF 245
+V++L CTH+PLI + + D+I + T F
Sbjct: 174 PEVVILGCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNTCAF 231
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 232 PKVEFHASGDVVWLEKQAKEWL 253
>gi|317179086|dbj|BAJ56874.1| glutamate racemase [Helicobacter pylori F30]
Length = 255
Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats.
Identities = 50/262 (19%), Positives = 96/262 (36%), Gaps = 19/262 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
++ L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHKIELLIVACNTASALALEEMQKYSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IRSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVF 245
+V++L CTH+PLI H + + D+I + F
Sbjct: 174 PEVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAF 231
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 232 PKVEFHASGDVVWLEKQAKEWL 253
>gi|217967731|ref|YP_002353237.1| glutamate racemase [Dictyoglomus turgidum DSM 6724]
gi|217336830|gb|ACK42623.1| glutamate racemase [Dictyoglomus turgidum DSM 6724]
Length = 265
Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats.
Identities = 61/258 (23%), Positives = 111/258 (43%), Gaps = 15/258 (5%)
Query: 14 NSILIFDSGIGGLIVLQKM-RFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I I DSG+GGL VL+++ + + ++ D FPYG +++R+ + S
Sbjct: 2 SKIGILDSGVGGLSVLKEVYLNNLADE-VYFLGDTKYFPYGIKPVEFIQERVFEIVSFF- 59
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+IACNTA ++ D L+ F + V + A ++ I +L+T T+
Sbjct: 60 KSLGVEEVIIACNTASSVAYDFLKDRFRDLKIHSIVLGAIEGAKNYKAKKIGVLATRRTM 119
Query: 133 RRTYTSNLIHSYVSQ-CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
LIH +S +++ S +E GI ++ + I+KEI C K
Sbjct: 120 ESNIYPRLIHEKISDKIEVYVQSCSEG-PLLETIEKGI-VEGELIEKEIMRCIDPLVEKN 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
+ ++L CTH P + V + L P + +D S + R + +F
Sbjct: 178 IEGLILGCTHLPFVKKVIKDLYP-NLFVVDPSLEVINFLRS--------DSNFNTKVEIF 228
Query: 252 LSGKPDIAMRRLMQGFGL 269
++G+ + L + G+
Sbjct: 229 VTGEAEEFQGILNKLLGM 246
>gi|308184333|ref|YP_003928466.1| glutamate racemase [Helicobacter pylori SJM180]
gi|308060253|gb|ADO02149.1| glutamate racemase [Helicobacter pylori SJM180]
Length = 255
Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats.
Identities = 52/262 (19%), Positives = 97/262 (37%), Gaps = 19/262 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+VI+L CTH+PLI P P + + D+I + F
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMEHFALPTPPLLIHSGDAIVEYLQQ--KYALKKNAHAF 231
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 232 PKVEFHASGDVIWLEKQAKEWL 253
>gi|10955413|ref|NP_053125.1| hypothetical protein pB171_063 [Escherichia coli]
gi|6009439|dbj|BAA84898.1| orf63 [Escherichia coli]
Length = 273
Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats.
Identities = 56/258 (21%), Positives = 106/258 (41%), Gaps = 12/258 (4%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M+++ + E I + DSG+GGL ++++ L+P IY D+ PYGN +
Sbjct: 1 MRLNMFSAES----PIGVIDSGVGGLTSVKEIINLLPGEDIIYCGDNTNAPYGNRSADDI 56
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS---MAFLGAVPAIKQAAAY 117
+ + L L +ACNT + ++ E S + L + +
Sbjct: 57 ISLTKKMLT-FLQSRNVKLVAVACNTISSTLESEEYSGYAKSFPFPILSIIEPAVEDVIR 115
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
Q + I++T T++ LI +I S LA +EE ++IK
Sbjct: 116 QQYKNVGIIATEFTIKTGCHKELIKKLNPTINIFGEPSKNLAMLIEEGNLNAPAILNDIK 175
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237
K + + I+L CTHYP++ ++F ++P + +++ + A + L ++
Sbjct: 176 KHVNHLIS---LHPVNEIILGCTHYPIVQNLFEAVAP-DIKFINPAHDQAISIKNHLGQL 231
Query: 238 NTHQTRVFDDHALFLSGK 255
N + + SG
Sbjct: 232 NLLNSSNIGTLQINTSGS 249
>gi|257459967|ref|ZP_05625071.1| glutamate racemase [Campylobacter gracilis RM3268]
gi|257442408|gb|EEV17547.1| glutamate racemase [Campylobacter gracilis RM3268]
Length = 400
Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats.
Identities = 57/220 (25%), Positives = 89/220 (40%), Gaps = 8/220 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I FDSGIGGL VL + F+Y AD+ PYG + + + L
Sbjct: 2 KIAFFDSGIGGLSVLAEALQRFSGAEFLYFADEDHVPYGTKSRAEIVRLSLDAVG-FLVS 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA + ELR F S+ +G PA+K AA + +++TP T+
Sbjct: 61 RGADGVVVACNTATSAAISELRGAF-SVPVIGMEPAVKLAADSFGARPTLLIATPLTISG 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ L+ +C ++ L ++ ++ + + E R
Sbjct: 120 EKLARLV--GRLECETWSLALPRLVEFA----QDLEFDSPAVRAYLSEELAKFELARLGS 173
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+VL CTH+ V R++ P V +D D R L
Sbjct: 174 LVLGCTHFNYFKDVLREILPPHVRIIDGIDGTLNRLASEL 213
>gi|210134751|ref|YP_002301190.1| glutamate racemase [Helicobacter pylori P12]
gi|226707586|sp|B6JLD2|MURI_HELP2 RecName: Full=Glutamate racemase
gi|210132719|gb|ACJ07710.1| glutamate racemase [Helicobacter pylori P12]
Length = 255
Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats.
Identities = 52/262 (19%), Positives = 97/262 (37%), Gaps = 19/262 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+VI+L CTH+PLI P P + + D+I + F
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVGYLQQ--KYALKKNAHAF 231
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 232 PKVEFHASGDVVWLEKQAKEWL 253
>gi|208434471|ref|YP_002266137.1| glutamate racemase [Helicobacter pylori G27]
gi|226707587|sp|B5Z6S2|MURI_HELPG RecName: Full=Glutamate racemase
gi|208432400|gb|ACI27271.1| glutamate racemase [Helicobacter pylori G27]
Length = 255
Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats.
Identities = 50/262 (19%), Positives = 95/262 (36%), Gaps = 19/262 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKEKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVF 245
+VI+L CTH+PLI + + D+I + F
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNAHAF 231
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 232 PKVEFHASGDVIWLEKQAKEWL 253
>gi|215276268|ref|YP_002332231.1| putative glutamate racemase [Escherichia coli O127:H6 str.
E2348/69]
gi|312964743|ref|ZP_07778984.1| glutamate racemase [Escherichia coli 2362-75]
gi|215267864|emb|CAS07533.1| putative glutamate racemase [Escherichia coli O127:H6 str.
E2348/69]
gi|312290592|gb|EFR18471.1| glutamate racemase [Escherichia coli 2362-75]
Length = 269
Score = 165 bits (417), Expect = 8e-39, Method: Composition-based stats.
Identities = 56/254 (22%), Positives = 105/254 (41%), Gaps = 8/254 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ I + DSG+GGL ++++ L+P IY D+ PYGN + + + L
Sbjct: 5 ESPIGVIDSGVGGLTSVKEIINLLPGEDIIYCGDNTNAPYGNRSADDIISLTKKMLT-FL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPS---MAFLGAVPAIKQAAAYTQSGLISILSTP 129
L +ACNT + ++ E S + L + + Q + I++T
Sbjct: 64 QSRNVKLVAVACNTISSTLESEEYSGYAKSFPFPILSIIEPAVEDVIRQQYKNVGIIATE 123
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ LI +I S LA +EE ++IKK +
Sbjct: 124 FTIKTGCHKELIKKLNPTINIFGEPSKNLAMLIEEGNLNAPAILNDIKKHVNHLIS---L 180
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+ I+L CTHYP++ ++F ++P + +++ + A + L ++N +
Sbjct: 181 HPVNEIILGCTHYPIVQNLFEAVAP-DIKFINPAHDQAISIKNHLGQLNLLNSSNIGTLQ 239
Query: 250 LFLSGKPDIAMRRL 263
+ SG +I L
Sbjct: 240 INTSGSMEIYKTVL 253
>gi|21672799|ref|NP_660866.1| glutamate racemase [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
gi|25008820|sp|Q8K924|MURI_BUCAP RecName: Full=Glutamate racemase
gi|21623448|gb|AAM68077.1| glutamate racemase [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
Length = 256
Score = 165 bits (417), Expect = 8e-39, Method: Composition-based stats.
Identities = 63/226 (27%), Positives = 116/226 (51%), Gaps = 3/226 (1%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
LI DSGIGGL +L ++ P ++IY+ D+ FPYG ++ L +R + + + I Y
Sbjct: 2 LIIDSGIGGLSILDNIKKKFPHINYIYMLDNEAFPYGKKKEKFLIERSIKIINAIKKIYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
+ +IACNTA T+ L+ TF S+ +G +P K A T++ +I +++T +T+ Y
Sbjct: 62 IKMVIIACNTASTISLPTLKKTF-SIPIIGVLPVFKPAIKITKNKIIGLIATRSTINSLY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
I+ Y + I ++++ LA E+ + I ++KK + I + D I+
Sbjct: 121 IKKTIYKYSLENTIKIIATNELAVIAEKKVRKLSISNIKLKKIFQSWII--LSIKPDTII 178
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
L CTH+ + +Q+ P++++D D+I + + +
Sbjct: 179 LGCTHFSFLKKEIQQIFHKPINFIDPGDTIVNKIEKYFYQKKIKKN 224
>gi|320537123|ref|ZP_08037095.1| glutamate racemase [Treponema phagedenis F0421]
gi|320145996|gb|EFW37640.1| glutamate racemase [Treponema phagedenis F0421]
Length = 267
Score = 164 bits (416), Expect = 9e-39, Method: Composition-based stats.
Identities = 64/245 (26%), Positives = 111/245 (45%), Gaps = 6/245 (2%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
DSG GGL LQ + L P+ +YVAD+ FPYG + + ++ ++
Sbjct: 11 AFIDSGTGGLPYLQYLHELEPDASMVYVADNAHFPYGKKTKEEVIAFASEMVEKLIARFN 70
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
P + ++ACNT + D LR F ++ F+G VP IK A +++ I IL+T T+ Y
Sbjct: 71 PEIIIVACNTMSVMALDSLRKKF-TLPFVGTVPGIKLAVKQSRNKRIGILATERTVCDPY 129
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T LI + S C+ + L +++E+ +E K I+ + + TD I+
Sbjct: 130 TERLIEEFGSGCYFEKRADQELIAQIEDGLITASY--EEKLKAIQPALEQFKKANTDSII 187
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
LACTH+ I VF + + +D + +A + + ++ + +
Sbjct: 188 LACTHFLHIEDVFESAAGSDMQIIDTRSGVIHQALRI---APCKKNPDAPPNSCYATAAL 244
Query: 257 DIAMR 261
D +
Sbjct: 245 DTHIE 249
>gi|217032399|ref|ZP_03437894.1| hypothetical protein HPB128_25g47 [Helicobacter pylori B128]
gi|298736238|ref|YP_003728764.1| glutamate racemase [Helicobacter pylori B8]
gi|216945966|gb|EEC24582.1| hypothetical protein HPB128_25g47 [Helicobacter pylori B128]
gi|298355428|emb|CBI66300.1| glutamate racemase [Helicobacter pylori B8]
Length = 255
Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 50/262 (19%), Positives = 93/262 (35%), Gaps = 19/262 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-----ELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVF 245
+VI+L CTH+PLI + + D+I + F
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMDHFALSTPPLLIHSGDAIVEYLQQ--KYTLKKNAHAF 231
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 232 PKVEFHASGDVIWLEKQAKEWL 253
>gi|317180321|dbj|BAJ58107.1| glutamate racemase [Helicobacter pylori F32]
Length = 255
Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 50/262 (19%), Positives = 93/262 (35%), Gaps = 19/262 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
++ L ++ACNTA L E++ P+I ++ I +L T AT
Sbjct: 60 PHKIELLIVACNTASALALGEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R N + ++ +++ + +EE E+ + +
Sbjct: 120 IRSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-----ELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVF 245
+V++L CTH+PLI H + + D+I + F
Sbjct: 174 PEVVILGCTHFPLIAHQIEGYLMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAF 231
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 232 PKVEFHASGDVVWLEKQAKEWL 253
>gi|308061881|gb|ADO03769.1| glutamate racemase [Helicobacter pylori Cuz20]
Length = 255
Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 49/262 (18%), Positives = 94/262 (35%), Gaps = 19/262 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKVQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
++ L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILSIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-----ELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVF 245
+V++L CTH+PLI H + + D+I + F
Sbjct: 174 PEVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACTF 231
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 232 PKVEFHASGDVVWLEKQAKEWL 253
>gi|194430317|ref|ZP_03062810.1| glutamate racemase [Escherichia coli B171]
gi|194411647|gb|EDX27976.1| glutamate racemase [Escherichia coli B171]
Length = 269
Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 54/246 (21%), Positives = 102/246 (41%), Gaps = 8/246 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
++ I + DSG+GGL ++++ L+P IY D+ PYGN + + + L
Sbjct: 5 ESPIGVIDSGVGGLTSVKEIINLLPGEDIIYCGDNTNAPYGNRSADDIISLTKKMLT-FL 63
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPS---MAFLGAVPAIKQAAAYTQSGLISILSTP 129
L +ACNT + ++ E S + L + + Q + I++T
Sbjct: 64 QSRNVKLVAVACNTISSTLESEEYSGYAKSFPFPILSIIEPAVEDVIRQQYKNVGIIATE 123
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ LI +I S LA +EE ++IKK +
Sbjct: 124 FTIKTGCHKELIKKLNPTINIFGEPSKNLAMLIEEGNLNAPAILNDIKKHVNHLIS---L 180
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+ I+L CTHYP++ ++F ++P + +++ + A + L ++N +
Sbjct: 181 HPVNEIILGCTHYPIVQNLFEAVAP-DIKFINPAHDQAISIKNHLGQLNLLNSSNIGTLQ 239
Query: 250 LFLSGK 255
+ SG
Sbjct: 240 INTSGS 245
>gi|297379750|gb|ADI34637.1| glutamate racemase [Helicobacter pylori v225d]
Length = 255
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 49/262 (18%), Positives = 94/262 (35%), Gaps = 19/262 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
++ L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHKIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-----ELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVF 245
+V++L CTH+PLI H + + D+I + F
Sbjct: 174 PEVVILGCTHFPLIAHPIESYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAF 231
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 232 PKVEFHASGDVVWLEKQAKEWL 253
>gi|258645749|ref|ZP_05733218.1| glutamate racemase [Dialister invisus DSM 15470]
gi|260403118|gb|EEW96665.1| glutamate racemase [Dialister invisus DSM 15470]
Length = 258
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 98/260 (37%), Gaps = 15/260 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I I DSG+GGL V ++ P FI++ D PYGN + L
Sbjct: 3 NRPIGIMDSGVGGLTVACVLKEKYPNEKFIFIGDTARNPYGNKSPEEVT-FFAEEMKAFL 61
Query: 73 DKYQPVLSVIACNTAFTLIKDELRS-TFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
Q + + ACNT + P + P ++ ++++ TP T
Sbjct: 62 AGKQVKMIIAACNTITFSVPPSFFEGKIPVIGMSLDFPELESV------NHLAVIGTPMT 115
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R + ++ + LA +E +E I + I + +
Sbjct: 116 IRSHRHRERLKKDFPLMNVTEIPIDGLAYAIEMGK-----EESFIYRMINKAVQKAGAES 170
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
D VLACTHYPL+ VFR + P +D ++ ++A +L N Q+ F
Sbjct: 171 VDAAVLACTHYPLVAGVFRDILP-NTLLIDPAERTVKKAMSILADQN-GQSEEAGPCLFF 228
Query: 252 LSGKPDIAMRRLMQGFGLKS 271
+ A + + FG ++
Sbjct: 229 FTESTLRAEILVKKMFGRRA 248
>gi|317013968|gb|ADU81404.1| glutamate racemase [Helicobacter pylori Gambia94/24]
Length = 255
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 52/261 (19%), Positives = 95/261 (36%), Gaps = 17/261 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
++ L ++ACNTA L +E++ P+I ++ I +L T AT+
Sbjct: 61 HEIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE ++ E ++ I +
Sbjct: 121 QSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEGELLETCMRYYFTPLKILPK---- 175
Query: 193 DVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
VI+L CTH+PLI P P + + D+I + F
Sbjct: 176 -VIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVEYLQQ--KYALKKNAHAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVIWLEKQAKEWL 253
>gi|127663884|gb|ABO28624.1| glutamate recemase [Helicobacter pylori 908]
Length = 255
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 52/261 (19%), Positives = 95/261 (36%), Gaps = 17/261 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
+Q L ++ACNTA L +E++ P+I ++ I +L T AT+
Sbjct: 61 HQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE + ++ + F +
Sbjct: 121 QSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-LP 174
Query: 193 DVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+VI+L CTH+PLI P P + + D+I + F
Sbjct: 175 EVIILGCTHFPLIAQKIESYFMGHFALPTPPLLIHSGDAIVEYLQQ--NYALKKNACAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVIWLEKQAKEWL 253
>gi|188527606|ref|YP_001910293.1| glutamate racemase [Helicobacter pylori Shi470]
gi|229486238|sp|B2UTT1|MURI_HELPS RecName: Full=Glutamate racemase
gi|188143846|gb|ACD48263.1| glutamate racemase [Helicobacter pylori Shi470]
Length = 255
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 49/262 (18%), Positives = 94/262 (35%), Gaps = 19/262 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
++ L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHKIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-----ELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVF 245
+V++L CTH+PLI H + + D+I + F
Sbjct: 174 PEVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAF 231
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 232 PKVEFHASGDVVWLEKQAKEWL 253
>gi|308063661|gb|ADO05548.1| glutamate racemase [Helicobacter pylori Sat464]
Length = 255
Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 49/262 (18%), Positives = 93/262 (35%), Gaps = 19/262 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKVQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
++ L ++ACNTA L E++ P+I ++ I +L T AT
Sbjct: 60 PHKIELLIVACNTASALALKEMQKHSKIPIVGVIGPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-----ELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVF 245
+V++L CTH+PLI H + + D+I + F
Sbjct: 174 PEVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAF 231
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 232 PKVEFHASGDVVWLEKQAKEWL 253
>gi|37811872|gb|AAR03940.1| glutamate racemase [Helicobacter pylori]
Length = 255
Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 51/262 (19%), Positives = 95/262 (36%), Gaps = 19/262 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + +I +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNISHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVF 245
+VI+L CTH+PLI + + D+I + F
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMEHFALLTPPLLIHSGDAIVEYLQQ--KYALKKNAHAF 231
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 232 PKVEFHASGDVIWLEKQAKEWL 253
>gi|261839621|gb|ACX99386.1| glutamate racemase [Helicobacter pylori 52]
Length = 255
Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 49/262 (18%), Positives = 93/262 (35%), Gaps = 19/262 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
++ L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSNAYDNALKQQDY-LNVSHLATSLFVPLIEENILEG-----ELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVF 245
+V++L CTH+PLI H + + D+I F
Sbjct: 174 PEVVILGCTHFPLIAHQIEGYFMEHFTLSTPPLLIHSGDAIVEYLHQ--KYALKKNACAF 231
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 232 PKVEFHASGDVIWLEKQAKEWL 253
>gi|109947429|ref|YP_664657.1| glutamate racemase [Helicobacter acinonychis str. Sheeba]
gi|123066226|sp|Q17XG8|MURI_HELAH RecName: Full=Glutamate racemase
gi|109714650|emb|CAJ99658.1| murI [Helicobacter acinonychis str. Sheeba]
Length = 255
Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 52/263 (19%), Positives = 97/263 (36%), Gaps = 21/263 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDSATIKQFSLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP---AIKQAAAYTQSGLISILSTPA 130
++ L ++ACNTA L + ++ P AIKQ ++ I +L T A
Sbjct: 60 PHEIELLIVACNTASALALETMQKHSKIPIVGVIEPSILAIKQHVKD-KNTPILVLGTKA 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+R + N + ++ +++ + +EE + ++ + F +
Sbjct: 119 TIRSSAYDNALKQQGY-LNVSHLATSLFVPLIEENVLEG----ELLETCMRYYFAPLKI- 172
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRV 244
+VI+L CTH+PLI + + D+I +
Sbjct: 173 FPEVIILGCTHFPLIAQKIESYFVEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNVYA 230
Query: 245 FDDHALFLSGKPDIAMRRLMQGF 267
F SG ++ +
Sbjct: 231 FPKIEFHASGDVIWLEQQAKEWL 253
>gi|332673655|gb|AEE70472.1| glutamate racemase [Helicobacter pylori 83]
Length = 255
Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 49/262 (18%), Positives = 99/262 (37%), Gaps = 19/262 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKVQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
++ L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHKIELLIVACNTASALALEEMQKYSKIPVVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE ++ + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVLHLATSLFVPLIEENI----LESELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVF 245
+V++L CTH+PLI H + + + D+I + F
Sbjct: 174 PEVVILGCTHFPLIAHQIKGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAF 231
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 232 PKVEFHASGDVVWLEKQAKEWL 253
>gi|317177617|dbj|BAJ55406.1| glutamate racemase [Helicobacter pylori F16]
Length = 255
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 50/262 (19%), Positives = 95/262 (36%), Gaps = 19/262 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKVQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
++ L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-----ELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPW------PVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+V++L CTH+PLI H P + + D+I + F
Sbjct: 174 PEVVILGCTHFPLIAHQIEGYFMEYFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAF 231
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 232 PKVEFHASGDVVWLEKQAKEWL 253
>gi|237752367|ref|ZP_04582847.1| glutamate racemase [Helicobacter winghamensis ATCC BAA-430]
gi|229375856|gb|EEO25947.1| glutamate racemase [Helicobacter winghamensis ATCC BAA-430]
Length = 258
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 47/256 (18%), Positives = 87/256 (33%), Gaps = 12/256 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG GG+ VL+ + +Y D PYG +++ +
Sbjct: 11 QRIGVFDSGAGGISVLKNLIESHNFKEILYYGDTARVPYGVKSKDTIRQYSLEALDFF-S 69
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA--AAYTQSGLISILSTPAT 131
++ L ++ACNTA ++ P P I A ++ I IL T AT
Sbjct: 70 PFKLDLLIVACNTASAYGLSAMQEVAPYPVIGVIEPGILALQNAIQDKNAKILILGTKAT 129
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ S L+ + +++ + VEE I + I ++
Sbjct: 130 ICSNLYSKLLREKGY-LNTFGLATSLFVPIVEEGIFEGAILDSTIAHYLKQY-----PST 183
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
+ I+L CTH+PLI + + + ++I + + +
Sbjct: 184 PNAIILGCTHFPLIANSIANFYSNKPLLIHSGEAIMEYLQNF---YTLQSFKETPKVKFY 240
Query: 252 LSGKPDIAMRRLMQGF 267
S + +
Sbjct: 241 ASDYVENLEKIANLWL 256
>gi|15645174|ref|NP_207344.1| glutamate racemase [Helicobacter pylori 26695]
gi|2492984|sp|P56068|MURI_HELPY RecName: Full=Glutamate racemase
gi|2313665|gb|AAD07615.1| glutamate racemase (glr) [Helicobacter pylori 26695]
Length = 255
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 49/262 (18%), Positives = 93/262 (35%), Gaps = 19/262 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKRQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-----ELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVF 245
+V++L CTH+PLI + + D+I + F
Sbjct: 174 PEVVILGCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--NYALKKNACAF 231
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 232 PKVEFHASGDVVWLEKQAKEWL 253
>gi|291059797|gb|ADD72532.1| glutamate racemase [Treponema pallidum subsp. pallidum str.
Chicago]
Length = 311
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 71/258 (27%), Positives = 115/258 (44%), Gaps = 11/258 (4%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
DSGIGGL +R +PE +YVAD V FPYGN + R + + +
Sbjct: 54 AFLDSGIGGLPYAHALRVRVPEASLVYVADRVYFPYGNKSSAQIIARASAVLQKVQTNFS 113
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
P + V+ACN+ + LR+ AIKQA A + I +L+T T+ Y
Sbjct: 114 PHIVVLACNSMSVNALEFLRAQVSVPVVGVVP-AIKQAVACSHKKHIGVLATQCTITHPY 172
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T+ L + + C + + L +E I ED ++ + + + DV+V
Sbjct: 173 TACLRAQFGAGCVFQMRADARLIECLERGL--IFEVEDMQREAVARSVMPFQEAGVDVLV 230
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
LACTH+ + H+F+ +D+ + + RR L P Q+++ + A +++G
Sbjct: 231 LACTHFVHVRHLFQDCVGTSCTVVDSLEGVVRRTLRLCP----PQSQLRGNAACYVTGAR 286
Query: 257 DIA----MRRLMQGFGLK 270
D R Q FGL+
Sbjct: 287 DAVCAARYARYAQHFGLR 304
>gi|300025005|ref|YP_003757616.1| glutamate racemase [Hyphomicrobium denitrificans ATCC 51888]
gi|299526826|gb|ADJ25295.1| Glutamate racemase [Hyphomicrobium denitrificans ATCC 51888]
Length = 281
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 59/273 (21%), Positives = 98/273 (35%), Gaps = 23/273 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+ + F+Y+AD PYGN A+ D L
Sbjct: 2 IGVFDSGLGGLTVLRVLTQRFKAADFVYLADHAHVPYGNRPSDAIVGYTRDCVED-LFAR 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLG-------AVPAIKQAA------------ 115
L ++ CNTA + L+ + P + G P ++ A
Sbjct: 61 GAKLVLLGCNTATAVALRRLQQEWLPRSPWAGTHNVLGIVAPTVEAATQTPWAVTSPQYP 120
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
+ I + T T+ I + + LA +EE + E+
Sbjct: 121 QKYNTDTIGVFGTTRTVTAGVYPEEIGKRCPKVTVVQQICSELAGAIEEKQPEAHL-EEL 179
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235
++ I G + +G +L CTH+PL+ H+FR+ P L + ++ L
Sbjct: 180 VRAGITGLLDQTDGVPPHRAILGCTHFPLVEHLFRKHLPPFTRILSQPEVVSDSFEDYLA 239
Query: 236 RINT-HQTRVFDDHALFLSGKPDIAMRRLMQGF 267
R + L +G P + +
Sbjct: 240 RRSHYLNGDESGSLTLLTTGDPVEVSEKARVFW 272
>gi|144898237|emb|CAM75101.1| Asp/Glu racemase [Magnetospirillum gryphiswaldense MSR-1]
Length = 198
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 49/194 (25%), Positives = 78/194 (40%), Gaps = 7/194 (3%)
Query: 10 KKLQN--SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
I +FDSG+GGL VL+ +R +P IY+ D PYG A+ +
Sbjct: 1 MTANRDLPIGVFDSGVGGLTVLKALRERLPAESLIYLGDTARLPYGTKSAAAVSHYALQ- 59
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQAAAYTQSGLISIL 126
+ L + V+A NT+ + LR+ FP + G V P AA + G I ++
Sbjct: 60 AAHALVRMGIKALVVADNTSSAHALEALRAEFPGLPVTGVVEPGAAAAALASAQGRIVVI 119
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T +T++ IH+ + + + S VEE I E + ++ F
Sbjct: 120 ATDSTVQAGTYPRAIHNSRPGARVISKACPLFVSMVEEGMTDGPIAEQLARHYLDPLFA- 178
Query: 187 KEGKRTDVIVLACT 200
D V T
Sbjct: 179 --NADEDKRVNGGT 190
>gi|257456303|ref|ZP_05621500.1| glutamate racemase [Treponema vincentii ATCC 35580]
gi|257446389|gb|EEV21435.1| glutamate racemase [Treponema vincentii ATCC 35580]
Length = 255
Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 68/249 (27%), Positives = 118/249 (47%), Gaps = 6/249 (2%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSGIGGL + P+ YVAD FPYG + + + + I+++ P
Sbjct: 1 MDSGIGGLPYFRYFHQKAPQAPAAYVADLEHFPYGEKTRDEVIRFAVGVTEKIINRLNPE 60
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138
+ ++ CNT T D LR TF S+ F+G VPA+K AA + + I I++T T+ Y
Sbjct: 61 MIIVVCNTMSTAALDALRKTF-SIPFVGTVPAVKVAAEVSVNKRIGIIATARTINDPYLD 119
Query: 139 NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198
LI S+ + C I + L +++E I ++E +K + + + TD +VLA
Sbjct: 120 KLIESFAADCTIERRADAELVAKIENGL--ITAPDEEKRKAVMPAIRQFKAAGTDTLVLA 177
Query: 199 CTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDI 258
CTH+ + F + + + +D+ + A +LP + +++G+
Sbjct: 178 CTHFLHLADTFAECAAPEIKVVDSLPGVVSHALDVLPP---PAGGNTSRSSCYVTGEITE 234
Query: 259 AMRRLMQGF 267
+ RL +G+
Sbjct: 235 RIDRLYRGY 243
>gi|15639397|ref|NP_218846.1| glutamate racemase (murI) [Treponema pallidum subsp. pallidum str.
Nichols]
gi|189025639|ref|YP_001933411.1| glutamate racemase [Treponema pallidum subsp. pallidum SS14]
gi|11386905|sp|O83421|MURI_TREPA RecName: Full=Glutamate racemase
gi|229486284|sp|B2S303|MURI_TREPS RecName: Full=Glutamate racemase
gi|3322687|gb|AAC65392.1| glutamate racemase (murI) [Treponema pallidum subsp. pallidum str.
Nichols]
gi|189018214|gb|ACD70832.1| glutamate racemase [Treponema pallidum subsp. pallidum SS14]
Length = 268
Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 71/258 (27%), Positives = 115/258 (44%), Gaps = 11/258 (4%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
DSGIGGL +R +PE +YVAD V FPYGN + R + + +
Sbjct: 11 AFLDSGIGGLPYAHALRVRVPEASLVYVADRVYFPYGNKSSAQIIARASAVLQKVQTNFS 70
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
P + V+ACN+ + LR+ AIKQA A + I +L+T T+ Y
Sbjct: 71 PHIVVLACNSMSVNALEFLRAQVSVPVVGVVP-AIKQAVACSHKKHIGVLATQCTITHPY 129
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
T+ L + + C + + L +E I ED ++ + + + DV+V
Sbjct: 130 TACLRAQFGAGCVFQMRADARLIECLERGL--IFEVEDMQREAVARSVMPFQEAGVDVLV 187
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP 256
LACTH+ + H+F+ +D+ + + RR L P Q+++ + A +++G
Sbjct: 188 LACTHFVHVRHLFQDCVGTSCTVVDSLEGVVRRTLRLCP----PQSQLRGNAACYVTGAR 243
Query: 257 DIA----MRRLMQGFGLK 270
D R Q FGL+
Sbjct: 244 DAVCAARYARYAQHFGLR 261
>gi|330718035|ref|ZP_08312635.1| glutamate racemase [Leuconostoc fallax KCTC 3537]
Length = 238
Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 8/227 (3%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I +FDSG+GG+ L+ + ++P FI+ D + PYG+ + + L
Sbjct: 4 KQPIGVFDSGVGGISTLRVLTQMLPNEDFIFFGDSLHAPYGSKTAGQVVDLSQKVVD-TL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
VIACNTA + K L +P++ +G PA+K+A I +L T TL
Sbjct: 63 LAQNVKAIVIACNTATSSAKPWLVDHYPNVPIIGIEPALKEAVDD-GHQDILVLGTALTL 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ Y HI ++ LA +E+ + +IK + F + + +
Sbjct: 122 SLPKFQTQLDQYQENHHITVLPCPGLADLIEQGDK----RLTDIKALLIDLFKDIQNRSF 177
Query: 193 DVIVLACTHYPLIVHVFRQLS--PWPVDWLDNSDSIARRARCLLPRI 237
+VL CTHYP I + + + + I R+ L +
Sbjct: 178 SAVVLGCTHYPFIQPLIETYLAQKNNIKFYTGYEGIGRQLIRTLEQK 224
>gi|315586766|gb|ADU41147.1| glutamate racemase [Helicobacter pylori 35A]
Length = 255
Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 50/261 (19%), Positives = 91/261 (34%), Gaps = 17/261 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQIFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
++ L ++ACNTA L E++ P+I ++ I +L T AT+
Sbjct: 61 HKIELLIVACNTASALALKEMQKHSKIPIVGVIEPSILAINQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R N + ++ +++ + +EE E+ + +
Sbjct: 121 RSHAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-----ELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+V++L CTH+PLI H + + D+I + F
Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVVWLEKQAKEWL 253
>gi|37811838|gb|AAR03910.1| glutamate racemase [Helicobacter pylori]
Length = 255
Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 49/262 (18%), Positives = 96/262 (36%), Gaps = 19/262 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
++ L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHKIELLIVACNTASALALEEMQKYSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPW------PVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+V++L CTH+PLI P + + D+I + F
Sbjct: 174 PEVVILGCTHFPLIAQKIEGYFMEYFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAF 231
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 232 PKVEFHASGDVVWLEKQAKEWL 253
>gi|116327584|ref|YP_797304.1| glutamate racemase [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
gi|116331805|ref|YP_801523.1| glutamate racemase [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
gi|122280458|sp|Q04QQ5|MURI_LEPBJ RecName: Full=Glutamate racemase
gi|122284619|sp|Q053X4|MURI_LEPBL RecName: Full=Glutamate racemase
gi|116120328|gb|ABJ78371.1| Glutamate racemase [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
gi|116125494|gb|ABJ76765.1| Glutamate racemase [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
Length = 258
Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 63/265 (23%), Positives = 107/265 (40%), Gaps = 14/265 (5%)
Query: 12 LQNS--ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
++ I + DSG+GGL VL+ + E +Y D PYG E + + + +
Sbjct: 1 MKGPLKIGLMDSGMGGLSVLKGILKYDAELEVVYYGDLKNSPYGEKETSEILELVRDVC- 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L + ++ACNTA + LR F S+ G PAIK A I++L+TP
Sbjct: 60 KRLQEENVSAILLACNTATSAAAQTLRKEF-SIPIFGMEPAIKPAILQNPGKKIALLATP 118
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T R L ++ I VS LA V++ DE +K + +
Sbjct: 119 VTQREKKLQRLKAELGAEELILPVSCPGLAGLVDKGEF------DEAEKYLRPILKKLRE 172
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL---PRINTHQTRVFD 246
+ + +VL CTHY + H+ + P V D + + L R++ +
Sbjct: 173 ENVENLVLGCTHYIFLKHIILKNFP-NVRIYDGNSGTIKHLLNSLQVRQRVSNRSSVSGS 231
Query: 247 DHALFLSGKPDIAMRRLMQGFGLKS 271
+ L L+ ++ R + ++
Sbjct: 232 VYKLILNSDEELHFRLATELLQFEN 256
>gi|45656923|ref|YP_001009.1| glutamate racemase [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|59798336|sp|Q72TI2|MURI_LEPIC RecName: Full=Glutamate racemase
gi|45600160|gb|AAS69646.1| glutamate racemase [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
Length = 256
Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 58/264 (21%), Positives = 107/264 (40%), Gaps = 14/264 (5%)
Query: 12 LQNS--ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
++ I + DSG+GGL VL+++ E +Y D PYG + + + + + +
Sbjct: 1 MKEPLKIGLMDSGMGGLSVLKELLKYDSELEIVYYGDLKNSPYGEKDASEVLELVRSVCN 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L K ++ACNTA + LR F S+ G PAIK A +++L+TP
Sbjct: 61 -FLQKENVSAILLACNTATSAAAQTLRKEF-SIPIFGMEPAIKPAILQNPGKKVALLATP 118
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T R L ++ + +S LA V++ D+ +K + +
Sbjct: 119 VTQREEKLQRLKSELKAEELVLSISCPGLAGLVDQG------DFDKAEKYLRPILANLQE 172
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+ + +VL CTHY + + + P V D + + L ++ +
Sbjct: 173 QDVENLVLGCTHYVFLKQIILKNFP-NVKIYDGNSGTIKHLLNSLQVPRVILNGSQNNRS 231
Query: 250 LF---LSGKPDIAMRRLMQGFGLK 270
++ L+ + + R + LK
Sbjct: 232 IYKLILNSEKEFHFRLASKLLSLK 255
>gi|306480261|emb|CBV36488.1| glutamate racemase [Helicobacter pylori]
Length = 255
Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 51/261 (19%), Positives = 94/261 (36%), Gaps = 17/261 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQIFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
+Q L ++ACNTA +L +E++ P+I ++ I +L T AT+
Sbjct: 61 HQIELLIVACNTASSLALEEMQKYSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
R N + ++ +++ + +EE + ++ + F +
Sbjct: 121 RSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG----ELLETCMRYYFTPLKI-LP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+V++L CTH+PLI H + + D+I F
Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLHQ--KYALKKNACAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVVRLEKQAKEWL 253
>gi|150021250|ref|YP_001306604.1| glutamate racemase [Thermosipho melanesiensis BI429]
gi|149793771|gb|ABR31219.1| glutamate racemase [Thermosipho melanesiensis BI429]
Length = 263
Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats.
Identities = 53/251 (21%), Positives = 104/251 (41%), Gaps = 22/251 (8%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSGIGG+ VL+K+ ++ H+IY+AD PYG AL+ + K
Sbjct: 2 KIGLFDSGIGGISVLKKLTYIN-GAHYIYIADTERAPYGLRTSEALESFVWEFVDFF-HK 59
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ ACNT ++ L + + ++ I+ + +S + ++ T T++
Sbjct: 60 KKVNEIFAACNTTDSI---ILENNLDLVIKYNSI--IRAGVSAAKSSKVGVIGTNVTIKN 114
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ ++ ++ + S VEE ++ E + + +
Sbjct: 115 GSYRRYLEVEGK--EVYQKATQLFVSLVEEGVFYGRMVEAIANY----YLLPLKKENVKE 168
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
++L CTH+P + + ++ P V +D A LL + NT + +++G
Sbjct: 169 LILGCTHFPFLKGIISRVLPK-VRIIDP----AEELSKLLVKNNTRR----PFVEFYVTG 219
Query: 255 KPDIAMRRLMQ 265
P R+L +
Sbjct: 220 DPKEFERKLKR 230
>gi|308182705|ref|YP_003926832.1| glutamate racemase [Helicobacter pylori PeCan4]
gi|308064890|gb|ADO06782.1| glutamate racemase [Helicobacter pylori PeCan4]
Length = 255
Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats.
Identities = 50/262 (19%), Positives = 93/262 (35%), Gaps = 19/262 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVANKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + +I +++ + +EE E+ + +
Sbjct: 120 IQSNAYDNALKQQGY-LNISHLATSLFVPLIEENILEG-----ELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVF 245
+V++L CTH+PLI + + D+I + F
Sbjct: 174 PEVVILGCTHFPLIAQKIESYFMEHFALSTPPLLIHSGDAIVGYLQQ--KYTLKKNACAF 231
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 232 PKVEFHASGDVIWLEKQAKEWL 253
>gi|254779458|ref|YP_003057563.1| glutamate racemase [Helicobacter pylori B38]
gi|254001369|emb|CAX29354.1| Glutamate racemase [Helicobacter pylori B38]
Length = 255
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 50/262 (19%), Positives = 95/262 (36%), Gaps = 19/262 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKVQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQIKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVF 245
+VI+L CTH+PLI + + D+I + F
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMGHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNAHAF 231
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 232 PKVEFHASGDVIWLEKQAKEWL 253
>gi|15611563|ref|NP_223214.1| glutamate racemase [Helicobacter pylori J99]
gi|11133705|sp|Q9ZLT0|MURI_HELPJ RecName: Full=Glutamate racemase
gi|151567728|pdb|2JFX|A Chain A, Crystal Structure Of Helicobacter Pylori Glutamate
Racemase In Complex With D-Glutamate
gi|151567729|pdb|2JFX|B Chain B, Crystal Structure Of Helicobacter Pylori Glutamate
Racemase In Complex With D-Glutamate
gi|151567730|pdb|2JFZ|A Chain A, Crystal Structure Of Helicobacter Pylori Glutamate
Racemase In Complex With D-Glutamate And An Inhibitor
gi|151567731|pdb|2JFZ|B Chain B, Crystal Structure Of Helicobacter Pylori Glutamate
Racemase In Complex With D-Glutamate And An Inhibitor
gi|168177008|pdb|2JFY|A Chain A, Crystal Structure Of Helicobacter Pylori Glutamate
Racemase In Complex With D-Glutamate
gi|168177009|pdb|2JFY|B Chain B, Crystal Structure Of Helicobacter Pylori Glutamate
Racemase In Complex With D-Glutamate
gi|217035286|pdb|2W4I|A Chain A, Crystal Structure Of Helicobacter Pylori Glutamate
Racemase In Complex With D-Glutamate And An Inhibitor
gi|217035287|pdb|2W4I|B Chain B, Crystal Structure Of Helicobacter Pylori Glutamate
Racemase In Complex With D-Glutamate And An Inhibitor
gi|217035288|pdb|2W4I|E Chain E, Crystal Structure Of Helicobacter Pylori Glutamate
Racemase In Complex With D-Glutamate And An Inhibitor
gi|217035289|pdb|2W4I|F Chain F, Crystal Structure Of Helicobacter Pylori Glutamate
Racemase In Complex With D-Glutamate And An Inhibitor
gi|4155036|gb|AAD06074.1| GLUTAMATE RACEMASE [Helicobacter pylori J99]
Length = 255
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 54/261 (20%), Positives = 94/261 (36%), Gaps = 17/261 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
++ L ++ACNTA L +E++ P+I ++ I +L T AT+
Sbjct: 61 HEIELLIVACNTASALALEEMQKYSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + +I +++ + +EE E+ + +
Sbjct: 121 QSNAYDNALKQQGY-LNISHLATSLFVPLIEESILEG-----ELLETCMHYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+VI+L CTH+PLI P P + + D+I + N F
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVEYLQQKYALKN--NACTFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG R+ +
Sbjct: 233 KVEFHASGDVIWLERQAKEWL 253
>gi|37811906|gb|AAR03971.1| glutamate racemase [Helicobacter pylori]
Length = 255
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 52/261 (19%), Positives = 95/261 (36%), Gaps = 17/261 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
+Q L ++ACNTA L +E++ P+I ++ I +L T AT+
Sbjct: 61 HQIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE + ++ + F +
Sbjct: 121 QSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-LP 174
Query: 193 DVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+VI+L CTH+PLI P P + + D+I + F
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFALPTPPLLIHSGDAIVGYLQQ--KYALKKNACAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVVWLEKQAKEWL 253
>gi|24215750|ref|NP_713231.1| glutamate racemase [Leptospira interrogans serovar Lai str. 56601]
gi|59798407|sp|Q8F1S7|MURI_LEPIN RecName: Full=Glutamate racemase
gi|24196929|gb|AAN50249.1| glutamate racemase [Leptospira interrogans serovar Lai str. 56601]
Length = 256
Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats.
Identities = 58/264 (21%), Positives = 107/264 (40%), Gaps = 14/264 (5%)
Query: 12 LQNS--ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
++ I + DSG+GGL VL+++ E +Y D PYG + + + + + +
Sbjct: 1 MKEPLKIGLMDSGMGGLSVLKELLKYDSELEIVYYGDLKNSPYGEKDASEVLELVRSVCN 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L K ++ACNTA + LR F S+ G PAIK A +++L+TP
Sbjct: 61 -FLQKENVSAILLACNTATSAAAQTLRKEF-SIPIFGMEPAIKPAILQNPGKKVALLATP 118
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T R L ++ + +S LA V++ D+ +K + +
Sbjct: 119 VTQREEKLQRLKSELKAEELVLSISCPGLAGLVDQG------DFDKAEKYLRPILANLQE 172
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+ + +VL CTHY + + + P V D + + L ++ +
Sbjct: 173 QDVENLVLGCTHYVFLKQIILKNFP-NVKIYDGNSGTIKHLLNSLQVPRVILNGSQNNRS 231
Query: 250 LF---LSGKPDIAMRRLMQGFGLK 270
++ L+ + + R + LK
Sbjct: 232 IYKLILNSEKEFHFRLASELLSLK 255
>gi|206901151|ref|YP_002251063.1| glutamate racemase [Dictyoglomus thermophilum H-6-12]
gi|206740254|gb|ACI19312.1| glutamate racemase [Dictyoglomus thermophilum H-6-12]
Length = 266
Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats.
Identities = 58/257 (22%), Positives = 105/257 (40%), Gaps = 14/257 (5%)
Query: 14 NSILIFDSGIGGLIVLQKMR-FLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ I I DSG+GGL VL+++ + + ++ D FPYG +++R+ + S
Sbjct: 2 SKIGILDSGVGGLSVLKEVYFNNLADE-VYFLGDTKYFPYGIKPVEFIQERVFEIVSFF- 59
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ ++ACNTA ++ D L F + V + + +L+T T
Sbjct: 60 KNFGVEEVIVACNTASSVAYDFLVDNFRDIKIHSIVLGAIEGIKSYTFKKVGVLATKRTK 119
Query: 133 RRTYTSNLIHSY-VSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
NLIH +++ S +E GI ++ + I+KEI C
Sbjct: 120 ESNIYPNLIHERISKNVEVYVQSCSEG-PLLETIEKGI-VEGEIIEKEIIKCTDPLVENG 177
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
+ ++L CTH P I V + L P + +D S + R + + +F
Sbjct: 178 IEGLILGCTHLPFIKGVIKNLYP-NLFIVDPSLEVVRFLSK-------TNSIDEKNVEIF 229
Query: 252 LSGKPDIAMRRLMQGFG 268
++G+ + L + G
Sbjct: 230 VTGEAEEFQAILNKLLG 246
>gi|1752702|gb|AAC44708.1| Glr [Helicobacter pylori]
Length = 255
Score = 161 bits (408), Expect = 7e-38, Method: Composition-based stats.
Identities = 50/262 (19%), Positives = 95/262 (36%), Gaps = 19/262 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVF 245
+VI+L CTH+PLI + + D+I + F
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVGYLQQ--KYALKKNAHAF 231
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 232 PKVEFHASGDVIWLEKQAKEWL 253
>gi|138896233|ref|YP_001126686.1| glutamate racemase [Geobacillus thermodenitrificans NG80-2]
gi|134267746|gb|ABO67941.1| Glutamate racemase [Geobacillus thermodenitrificans NG80-2]
Length = 209
Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 45/202 (22%), Positives = 81/202 (40%), Gaps = 5/202 (2%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
L +Y + VIACNTA ++ DE+R+ P + A T++G I ++
Sbjct: 1 MIHYLQQYPLKMLVIACNTATAVVLDEVRAKLDIPVLGVVHPGARAALKATKNGHIGVIG 60
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+R + S + H+ ++ VE ++ +
Sbjct: 61 TVGTVRSKAYEKALQSINPRVHVESLACPKFVPLVESGDFEG----EKALAIVAESLAPL 116
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-FD 246
+ DV++L CTHYPL+ + R+ V + + D AR +L + T
Sbjct: 117 RPRPIDVLILGCTHYPLLAPLIREYMGKKVKLICSGDETAREVSAILHHSHLLYTGGCEP 176
Query: 247 DHALFLSGKPDIAMRRLMQGFG 268
+H F +G ++ + + FG
Sbjct: 177 EHLFFTTGSKELFEKISRKWFG 198
>gi|261838209|gb|ACX97975.1| glutamate racemase [Helicobacter pylori 51]
Length = 255
Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 47/262 (17%), Positives = 91/262 (34%), Gaps = 19/262 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
++ L ++ACNTA L +E++ P+I ++ I +L T A
Sbjct: 60 PHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAM 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-----ELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVF 245
+V++L CTH+PLI + + D+I F
Sbjct: 174 PEVVILGCTHFPLIAQKIEGYFMEHFALSAPPLLIHSGDAIVEYLHQ--KYALKKNACAF 231
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 232 PKVEFHASGDVVWLEKQAKEWL 253
>gi|317012362|gb|ADU82970.1| glutamate racemase [Helicobacter pylori Lithuania75]
Length = 255
Score = 161 bits (408), Expect = 9e-38, Method: Composition-based stats.
Identities = 51/261 (19%), Positives = 94/261 (36%), Gaps = 17/261 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQIFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
+Q L ++ACNTA L E++ P+I ++ I +L T AT+
Sbjct: 61 HQIGLLIVACNTASALALKEMQKHSKIPVVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE + ++ + F +
Sbjct: 121 QSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG----ELLETCMRYYFTPLKI-LP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+V++L CTH+PLI + + D+I + T VF
Sbjct: 175 EVVILGCTHFPLIAQKIGGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNTHVFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVIWLEKQAKEWL 253
>gi|157363388|ref|YP_001470155.1| glutamate racemase [Thermotoga lettingae TMO]
gi|157313992|gb|ABV33091.1| glutamate racemase [Thermotoga lettingae TMO]
Length = 278
Score = 161 bits (408), Expect = 9e-38, Method: Composition-based stats.
Identities = 56/252 (22%), Positives = 105/252 (41%), Gaps = 19/252 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSGIGG VLQK+ MP ++YVAD + PYG + +R+ + + L
Sbjct: 2 KIGVFDSGIGGFTVLQKLVEYMPHNEYVYVADTLYAPYGTKTHQQIFERVTRIIN-FLAL 60
Query: 75 YQPVLSVIACNTAFTLIK-DELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
V ACNTA ++K L + P + ++ + I + +T T++
Sbjct: 61 QGADCIVAACNTADAVLKLSSLSARIPPYFGILDFD-----INFSSAQCIGVAATELTIK 115
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
L+ + I L +E + + EIK+ E K D
Sbjct: 116 SGIYEKLLLNRGI-SKIIQRPCQKLVELIENNEVHGRQADIEIKECFEPF------KNAD 168
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+++L CTH PL++ + + P + + D ++S+ + + ++ + F++
Sbjct: 169 LVILGCTHLPLLIEKIQTIFPK-LRFYDPAESLVKNIWLSCRQDG----KIIGKISFFVT 223
Query: 254 GKPDIAMRRLMQ 265
P ++ +
Sbjct: 224 QDPLSFHTKISK 235
>gi|37811807|gb|AAR03882.1| glutamate racemase [Helicobacter pylori]
Length = 255
Score = 161 bits (408), Expect = 9e-38, Method: Composition-based stats.
Identities = 49/261 (18%), Positives = 92/261 (35%), Gaps = 17/261 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKVQIFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
+Q L ++ACNTA L +E++ P+I ++ I +L T AT+
Sbjct: 61 HQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE E+ + +
Sbjct: 121 QSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-----ELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+V++L CTH+PLI + + D+I + F
Sbjct: 175 EVVILGCTHFPLIARQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVIWLEKQAKEWL 253
>gi|46200986|ref|ZP_00055981.2| COG0796: Glutamate racemase [Magnetospirillum magnetotacticum MS-1]
Length = 243
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 52/233 (22%), Positives = 88/233 (37%), Gaps = 5/233 (2%)
Query: 36 MPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95
MP+ +Y+ D PYG + + + ++ L + V+ACNTA + D +
Sbjct: 1 MPDEQLLYLGDVARQPYGTKSPRTVTRYAVQ-AAEFLVEKGIKALVVACNTASAVALDAI 59
Query: 96 RSTFPSMAFLGAVPA-IKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVS 154
FP + LG V A AA + G I + +T T R I + V
Sbjct: 60 EQRFPGLPVLGVVEAGADGAARASPQGRIVVAATEGTCRSEAYERAIARRRGGAQVRCVP 119
Query: 155 SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214
+ + EE I E + + F + D +VL CTH+PL+ +L+
Sbjct: 120 CPLFVALAEEGLTDGPIVESVARHYLGSLFD--GSQGGDCLVLGCTHFPLLAPALARLAG 177
Query: 215 WPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
V +D +++ + LL + L + P+ R + F
Sbjct: 178 PGVTLVDCAEATSAMLVRLLAGREAPRGNG-GGLRLISTDAPERFARMAGRLF 229
>gi|167741431|ref|ZP_02414205.1| glutamate racemase [Burkholderia pseudomallei 14]
Length = 171
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 4/172 (2%)
Query: 1 MKIDNYPCEK--KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDH 58
M P + + I +FDSG+GGL VL+ +R +P+ +YVAD PYG +D
Sbjct: 1 MTTPYAPDSRAPSARAPIGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDV 60
Query: 59 ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+ +R + + + L V+ACNTA +R P + +G P IK AA ++
Sbjct: 61 FIVERTLAI-GEWLVAQGAKALVVACNTATAQSIAIVRERLP-IPLVGVEPGIKPAALHS 118
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
++ + +L+T ATLR L+ + + C L +E G
Sbjct: 119 KTRVAGVLATQATLRSARFEALLARHAADCRFLCQPGHGLVEAIERGDTGSP 170
>gi|108562952|ref|YP_627268.1| glutamate racemase [Helicobacter pylori HPAG1]
gi|123373795|sp|Q1CTX8|MURI_HELPH RecName: Full=Glutamate racemase
gi|107836725|gb|ABF84594.1| glutamate racemase [Helicobacter pylori HPAG1]
Length = 255
Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 49/261 (18%), Positives = 91/261 (34%), Gaps = 17/261 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQIFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
+Q L ++ACNTA L +E++ P+I ++ I +L T AT+
Sbjct: 61 HQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE E+ + +
Sbjct: 121 QSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-----ELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+V++L CTH+PLI + + D+I + F
Sbjct: 175 EVVILGCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVGYLQQ--KYALKKNACAFP 232
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 233 KVEFHASGDVVWLEKQAKEWL 253
>gi|301166907|emb|CBW26486.1| putative glutamate racemase [Bacteriovorax marinus SJ]
Length = 256
Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 70/254 (27%), Positives = 112/254 (44%), Gaps = 12/254 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSGIGG +L+K+ L PE Y+AD PYGN + R +L L K+
Sbjct: 9 IGIFDSGIGGFSILKKIHELAPELEVYYIADQGFAPYGNKSRKEVIDRCHYLC-HELMKF 67
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILSTPATLR 133
L V+ACNTA + DELR+TF ++ F+G P + + +T S +++T +
Sbjct: 68 DLDLIVVACNTATGVAIDELRNTF-TIPFVGVEPFVNALSKHTWKESDRACVITTELMSK 126
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
L++ + + LA+ VE++ E+E+ +++
Sbjct: 127 SERFQKLVNRLDPDKRLFYKVTPGLATIVEDFFINK--NEEELNLKLKEELSFVGESSYS 184
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
++L CTHYPLI + V L +A R LL + + F F S
Sbjct: 185 HLILGCTHYPLIAKYIEATTGASV--LSPCLYVANRVLSLLDLSSGENSETFQ----FAS 238
Query: 254 GKPDIAMRRLMQGF 267
+ +R + + F
Sbjct: 239 TAKEDVLRFVSKDF 252
>gi|33435087|gb|AAP39987.2| glutamate racemase [Helicobacter acinonychis]
Length = 255
Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 51/263 (19%), Positives = 97/263 (36%), Gaps = 21/263 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FD+G+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDTGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDSATIKQFSLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP---AIKQAAAYTQSGLISILSTPA 130
++ L ++ACNTA L + ++ P AIKQ ++ I +L T A
Sbjct: 60 PHEIELLIVACNTASALALETMQKHSKIPIVGVIEPSILAIKQHVKD-KNTPILVLGTKA 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+R + N + ++ +++ + +EE + ++ + F +
Sbjct: 119 TIRSSAYDNALKQQGY-LNVSHLATSLFVPLIEENVLEG----ELLETCMRYYFAPLKI- 172
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRV 244
+VI+L CTH+PLI + + D+I +
Sbjct: 173 FPEVIILGCTHFPLIAQKIESYFVEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNVYA 230
Query: 245 FDDHALFLSGKPDIAMRRLMQGF 267
F SG ++ +
Sbjct: 231 FPKIEFHASGDVIWLEQQAKEWL 253
>gi|46091437|dbj|BAD13881.1| HP0549 [Helicobacter pylori]
Length = 286
Score = 159 bits (403), Expect = 4e-37, Method: Composition-based stats.
Identities = 50/259 (19%), Positives = 92/259 (35%), Gaps = 19/259 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
++ L ++ACNTA L E++ P+I ++ I +L T AT
Sbjct: 60 PHKIELLIVACNTASALALGEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+R N + ++ +++ + +EE E+ + +
Sbjct: 120 IRSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-----ELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVF 245
+V++L CTH+PLI H + + D+I + F
Sbjct: 174 PEVVILGCTHFPLIAHQIEGYLMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAF 231
Query: 246 DDHALFLSGKPDIAMRRLM 264
SG ++
Sbjct: 232 PKVEFHASGDVVWLEKQAK 250
>gi|163803387|ref|ZP_02197262.1| glutamate racemase [Vibrio sp. AND4]
gi|159172791|gb|EDP57636.1| glutamate racemase [Vibrio sp. AND4]
Length = 237
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 72/233 (30%), Positives = 112/233 (48%), Gaps = 9/233 (3%)
Query: 40 HFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTF 99
++Y+ D+ +PYG E L R+ L + +++++Q + VIACNTA T++ LR+
Sbjct: 2 DYLYLFDNEAYPYGELEHDVLINRVNTLVAALVEEHQADIVVIACNTASTIVLPSLRANL 61
Query: 100 PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA 159
++ +G VPAIK A+ S + +++TPAT+ R YT LI + + L+ S L
Sbjct: 62 -AIPVVGVVPAIKPASLL-ASQGVGLIATPATVTRQYTRELIRDFAQGKPVELLGSTRLV 119
Query: 160 SRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
EE G I E +E + K DV VL CTH+PLI Q V
Sbjct: 120 DMAEEKLRGQIIHIPE----LESILLPLRHK-VDVAVLGCTHFPLIKDEIHQALGGDVML 174
Query: 220 LDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP--DIAMRRLMQGFGLK 270
+D+ +IARR R LL +T ++ S P + A+ + G
Sbjct: 175 IDSGKAIARRVRALLASDKEQETAEEGSKKIYASASPWQEDALNACLANLGFN 227
>gi|260221040|emb|CBA29208.1| hypothetical protein Csp_A10990 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 147
Score = 158 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 44/129 (34%), Positives = 68/129 (52%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I +FDSG+GGL VL+ +R +P F+YVAD PYG +D L +R +
Sbjct: 6 NCPIGVFDSGVGGLSVLRALRAELPHEKFVYVADSGHAPYGERDDDYLIERSHTIVRWFR 65
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
D++Q V+ACNTA LR P + +G PA+K A +++ +I +++T +TL
Sbjct: 66 DRHQIKALVVACNTATAAAIHVLREAHPELPIIGIEPALKPAVVQSKTKVIGVMATRSTL 125
Query: 133 RRTYTSNLI 141
L+
Sbjct: 126 NSEKFKRLL 134
>gi|167043360|gb|ABZ08063.1| putative Asp/Glu/hydantoin racemase [uncultured marine
crenarchaeote HF4000_ANIW141O9]
Length = 253
Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats.
Identities = 64/260 (24%), Positives = 117/260 (45%), Gaps = 20/260 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG G L +++ ++ + +Y AD FPYG L K + + + +K
Sbjct: 3 KIAVFDSGFGSLSIIKPIQQAIKS-DIVYFADQKNFPYGKKSKSELTKIITKTVNMLEEK 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
++P L VI NT L+ + +P IK+AA + +G ++IL+T A +R
Sbjct: 62 FEPDLIVIGSNTPSLLV------EINKKNIVKVLPPIKKAAKISMTGNVAILATLALIRS 115
Query: 135 TYTSNLIHSYVSQCHIHL--VSSMILASRVEEYAC--GIKIKEDEIKKEIEGCFIEKEGK 190
S + H++L + + L VEE K+ E ++K +
Sbjct: 116 KKLSEYVRKSRLPKHVNLKRIDATQLVRLVEEGKFLDNRKLCEKTVRKVLSK---PFLKS 172
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
DV +L+ TH P ++ ++ P + ++D ++ IA++ R ++ + + + +
Sbjct: 173 NVDVAILSSTHLPFLLPFLKKQFP-NITFVDPANEIAQKVRKIVAK----KPSKTNTMKI 227
Query: 251 FLSGKPDIAMRRLMQGFGLK 270
F S P R L Q G+K
Sbjct: 228 FTSSDPKKFQRYLWQ-IGIK 246
>gi|254468115|ref|ZP_05081521.1| glutamate racemase [beta proteobacterium KB13]
gi|207086925|gb|EDZ64208.1| glutamate racemase [beta proteobacterium KB13]
Length = 263
Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 64/258 (24%), Positives = 115/258 (44%), Gaps = 10/258 (3%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I+IFDSG+GG +L+++ L IYVAD+ PYG ++KR+ +FS +
Sbjct: 6 PVIIIFDSGLGGTSILKEIISLNLSQQLIYVADNQYLPYGLQTKDFIEKRVCEIFSSLNQ 65
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+Y+ SVIACNTA + LR F + P IK A T++ I IL+T T++
Sbjct: 66 QYRIEASVIACNTATAYAANSLRGKFK-FPIVAMEPGIKPAINLTKNNNIGILATEGTIK 124
Query: 134 RTYTSNLIHSYVSQ-CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ +L+ + S I ++ + L +E ++ + + +
Sbjct: 125 SSRFISLVDRFTSDQHKICIIPGVGLVEEIE----NQSTSNKKLDAILLPIINQLLQEEA 180
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D +VL CTHYPLI + ++L P + +D + ++ + +I+
Sbjct: 181 DTLVLGCTHYPLIKNKLKKLLPE-IQIVDTTKAVLNVLTGYIDQIH---PSEQKTILFMT 236
Query: 253 SGKPDIAMRRLMQGFGLK 270
S + + ++ +
Sbjct: 237 SKDEETYLSKIKKLTNFS 254
>gi|87118931|ref|ZP_01074829.1| Glutamate racemase [Marinomonas sp. MED121]
gi|86165322|gb|EAQ66589.1| Glutamate racemase [Marinomonas sp. MED121]
Length = 290
Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 75/269 (27%), Positives = 124/269 (46%), Gaps = 15/269 (5%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
+ + ++ I I DSG GGL VL + Y + Y ADD PYG+ +++
Sbjct: 1 MSEIKVDSGVRPKIGILDSGAGGLTVLAALIKSNKAYDYYYFADDAFAPYGSLSIDKIQQ 60
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTF----PSMAFLGAVPAIKQAAAYT 118
R++ + L VIACNTA + +RS ++ +G PAIK A+
Sbjct: 61 RVLSICD-FLIDKGVTSLVIACNTATLEVIHLVRSCPKVIEKNILIVGIEPAIKPASLLD 119
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQC-----HIHLVSSMILASRVEEYACGIKIKE 173
G++ +L+TP T + LI+ H ++S +LA+ ++ +
Sbjct: 120 YQGVVCVLATPITCQSNRLQALINHASLNRVSQSSRYHCIASEVLANAIDALPGSGSRVD 179
Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
E+++ I E + + ++VLACTHYPLI +F L +PV L+ SD++ARR
Sbjct: 180 LELQR-IRAIMAELDSR---ILVLACTHYPLIKSMFEGLFDYPVQILEPSDAVARRVIDC 235
Query: 234 LPRINTHQTRVFDDHALFLSGKPDIAMRR 262
LP ++ +L+ SG + R
Sbjct: 236 LPSMHLG-GHESLSVSLYSSGDNQMESRL 263
>gi|325956149|ref|YP_004286759.1| glutamate racemase [Lactobacillus acidophilus 30SC]
gi|325332714|gb|ADZ06622.1| glutamate racemase [Lactobacillus acidophilus 30SC]
gi|327182953|gb|AEA31400.1| glutamate racemase [Lactobacillus amylovorus GRL 1118]
Length = 268
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 46/242 (19%), Positives = 86/242 (35%), Gaps = 8/242 (3%)
Query: 28 VLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTA 87
+ +K+ +P +++ D+ PYGN + L L + ACNTA
Sbjct: 18 IAKKVIEKLPNESTVFIGDNAHMPYGNRTKEDIINLTRRSV-KFLLNNDVKLVIFACNTA 76
Query: 88 FTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQ 147
+ A+ T++ +++++T T+ IH +
Sbjct: 77 TAAAMGTIEKEIEPQIIGVIQSGALAASRTTKNKKVAVVATSVTVGSHAYEKEIHFRDPE 136
Query: 148 CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVH 207
+ +++ LA VE + K ++ +GK D +VL CTHYPLI
Sbjct: 137 IEVTELATPKLAPLVEAQE-----EHATNLKVVKESLAPLKGKDFDTLVLGCTHYPLIEQ 191
Query: 208 VFRQLSPW-PVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALFLSGKPDIAMRRLMQ 265
F++ V LD +D +A+ ++ R H + +G +
Sbjct: 192 EFKEAIDDENVTILDPADQVAQYTFNVMRRDGLFSEEGHKPVHEYYTTGNSTSFDKLART 251
Query: 266 GF 267
Sbjct: 252 FM 253
>gi|293596521|ref|ZP_06684239.1| glutamate racemase [Listeria monocytogenes J2818]
gi|293589867|gb|EFF98201.1| glutamate racemase [Listeria monocytogenes J2818]
Length = 176
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 59/148 (39%), Gaps = 1/148 (0%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I DSG+GGL V++++ +P Y+ D PYG + + K ++
Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWE-MTNF 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + VIACNTA ++R P + A T++ I +L T T
Sbjct: 60 LVDRGIKMLVIACNTATAAALYDIREKLDIPVIGVIQPGSRAALKATRNNKIGVLGTLGT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILA 159
+ + + + ++ +
Sbjct: 120 VESMAYPTALKGLNRRVEVDSLACTKIC 147
>gi|87303353|ref|ZP_01086141.1| Glutamate racemase [Synechococcus sp. WH 5701]
gi|87282001|gb|EAQ73963.1| Glutamate racemase [Synechococcus sp. WH 5701]
Length = 276
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 49/252 (19%), Positives = 91/252 (36%), Gaps = 18/252 (7%)
Query: 27 IVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNT 86
VL++M P+ F+Y+ D PYG+ + +++ + L + Q ++ACNT
Sbjct: 16 TVLRRMLEHHPDLPFVYLGDTARVPYGHRSPNEIRRIAAEVVG-WLREQQVDAVLMACNT 74
Query: 87 AFTLIKDELR-STFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYV 145
L D + G + + A+ Q + +L+TPAT +
Sbjct: 75 TNALAFDIAEAEAGEGVPVFGLIDCV---ASQLQCQRVGVLATPATASSGAYGRALRQAD 131
Query: 146 SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLI 205
CH+ + +E + ++ +R + IVL CTHYPL+
Sbjct: 132 PSCHVIEIGCPAFVPLIE----DGNFADPRLRAAAIAYLEPLLAERVEAIVLGCTHYPLL 187
Query: 206 VHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH---------ALFLSGKP 256
+ R+L P V +D + + + L + +Q H ++G
Sbjct: 188 EELLRELLPPEVVLVDPAQAAVAQLGHRLGKSPVYQAPCCGLHPREVPVERGRFCVTGDA 247
Query: 257 DIAMRRLMQGFG 268
+ G
Sbjct: 248 EAFALAAAPWLG 259
>gi|15615633|ref|NP_243937.1| glutamate racemase [Bacillus halodurans C-125]
gi|10175693|dbj|BAB06790.1| glutamate racemase [Bacillus halodurans C-125]
Length = 200
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 73/190 (38%), Gaps = 5/190 (2%)
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138
+ VIACNTA ++ DE++ P P A T++ ++++ T T++
Sbjct: 1 MLVIACNTAAAVVLDEVKEKLPIPVVGVVQPGAISALKVTKNEHVAVIGTTGTIQSGAYE 60
Query: 139 NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198
+ + ++ + ++ VE E + +GK D ++L
Sbjct: 61 HTLKKINNRVQVESLACPPFVPLVERGIFSG----PEALETCSETLKPLQGKGFDTLILG 116
Query: 199 CTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALFLSGKPD 257
CTHYPL+ V +++ + + + D AR LL +T +H + +G
Sbjct: 117 CTHYPLLKPVIQEVMGPDIQIISSGDETAREVSGLLYHKQRLRTCNEAPEHHFYTTGDAK 176
Query: 258 IAMRRLMQGF 267
R
Sbjct: 177 SFKRLADVWL 186
>gi|183220317|ref|YP_001838313.1| glutamate racemase [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
gi|189910434|ref|YP_001961989.1| glutamate racemase [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167775110|gb|ABZ93411.1| Glutamate racemase [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167778739|gb|ABZ97037.1| Glutamate racemase [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
Length = 270
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 60/249 (24%), Positives = 90/249 (36%), Gaps = 10/249 (4%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ + I IFDSG+GGL VL+ + +IY D V PYG + + F
Sbjct: 2 NSRGRYKIGIFDSGLGGLSVLRTLWKETSNIDYIYFGDLVHSPYGQKSKQKVIELSKNAF 61
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
L + + ACNTA + D LR S+ G PAIK A A I++ +T
Sbjct: 62 E-YLIEKDCEAVLFACNTATSAAADFLRKEH-SIPIFGMEPAIKPALAENPGVKIAVFAT 119
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
TL+ NL+ I V LA ++ I+
Sbjct: 120 DLTLKEEKFKNLVTGLAKGSEILPVPCEGLAKLIDSDRWEDAWD-------FLDSKIKLV 172
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
T++IVL CTHY + + P + D + + L + +
Sbjct: 173 KSETEIIVLGCTHYVFLRERIQYHYP-NIKVYDGNLGTTLHIKNKLHLPDGSKENKNQLD 231
Query: 249 ALFLSGKPD 257
L + D
Sbjct: 232 ILLNTSDSD 240
>gi|310826435|ref|YP_003958792.1| hypothetical protein ELI_0815 [Eubacterium limosum KIST612]
gi|308738169|gb|ADO35829.1| hypothetical protein ELI_0815 [Eubacterium limosum KIST612]
Length = 269
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 51/247 (20%), Positives = 105/247 (42%), Gaps = 11/247 (4%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+ I + DSGIGG VL++++ +P + +Y+ D PYG E+ +
Sbjct: 1 MGNSSPIGLIDSGIGGFTVLRELQRQLPRENIVYLGDAKRMPYGERENEEIIAFGNSDI- 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA-AAYTQSGLISILST 128
L+ ++ACNT +L + S ++ V A A + G + +++T
Sbjct: 60 RFLENMGVKAILLACNTISSL----IESLNANVPLFSIVEAGCLATIERQKEGAVGLIAT 115
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ +++ S+ + LA+ + + + + IK+ I+ F E
Sbjct: 116 TATVKNGTYEHILSSHTQALRYITQGTRTLANVINNHPGELALLRQNIKEAIDPIF---E 172
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
+R ++L CTH+P++ ++ P + +D +D + L + N +D
Sbjct: 173 RERVSALLLGCTHFPIVRKTIEEMYP-CLSIIDPADKQITLLKEYLEKNNAFNESKYDGV 231
Query: 249 -ALFLSG 254
+ +G
Sbjct: 232 TRICATG 238
>gi|85711145|ref|ZP_01042205.1| glutamate racemase [Idiomarina baltica OS145]
gi|85695058|gb|EAQ32996.1| glutamate racemase [Idiomarina baltica OS145]
Length = 248
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 40/253 (15%), Positives = 89/253 (35%), Gaps = 15/253 (5%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
+FDSG+GGL V + ++ +Y D PYG+ + + + + +
Sbjct: 4 GVFDSGVGGLTVARSLQRSRYFSELLYFGDTARVPYGSKDSNTVTRYALEAVEFFNGT-D 62
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAI---KQAAAYTQSGLISILSTPATLR 133
++ACNT + + ++ + P + +QA + +++T +T++
Sbjct: 63 VDALIVACNTVSVVALETMQKFSNKPVYGVLEPGVMALEQATEVNHDSQVLVIATRSTIQ 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
I + +++ + VEE I +R D
Sbjct: 123 SGEYQRRIKQLGFEHA-TAMATPLFVPIVEEELYEGAILHATFDHYFSAL------ERPD 175
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
V++L CTH+PLI + + + +++ + L + + + S
Sbjct: 176 VVLLGCTHFPLISDAISEYF-SGAKTIHSGEAMVQWLSQHL---DLKRQFDETPITIHAS 231
Query: 254 GKPDIAMRRLMQG 266
+ R +
Sbjct: 232 ENVEAVRRVAKRW 244
>gi|33433444|gb|AAP39989.2| glutamate racemase [Helicobacter acinonychis]
Length = 255
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 50/262 (19%), Positives = 98/262 (37%), Gaps = 21/262 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FD+G+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 3 IGVFDTGVGGFSVLKSLLKVQLFDE-IIYYGDSARVPYGTKDSATIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP---AIKQAAAYTQSGLISILSTPAT 131
++ L ++ACNTA L + ++ P AIKQ ++ I +L T AT
Sbjct: 61 HEIELLIVACNTASALALETMQKHSKIPIVGVIEPSILAIKQHVKD-KNTPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSSAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG----ELLETCMRYYFAPLKI-F 173
Query: 192 TDVIVLACTHYPLIVHVFRQ------LSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+VI+L CTH+PLI + + + D+I + F
Sbjct: 174 PEVIILGCTHFPLIAQKIESYFVEHFILSKTPLLIHSGDAIVEYLQQ--KYALKKNVYAF 231
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 232 PKIEFHASGDVIWLEKQAKEWL 253
>gi|319760706|ref|YP_004124644.1| glutamate racemase [Candidatus Blochmannia vafer str. BVAF]
gi|318039420|gb|ADV33970.1| glutamate racemase [Candidatus Blochmannia vafer str. BVAF]
Length = 281
Score = 155 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 62/265 (23%), Positives = 115/265 (43%), Gaps = 12/265 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
+++LI DSG+GGL + +R ++P +++Y+ D+ FPYGN + + +R++ + I
Sbjct: 12 STVLILDSGVGGLFFYETVRRIVPFVNYLYLIDNKCFPYGNCSEKFIIQRVILIIERICR 71
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ L VIACNT + L +G VP I+ A T++G++ IL T T+
Sbjct: 72 FLKFDLVVIACNTISVVALSIL-QINFRFPIIGVVPEIQLACQCTKNGVVGILGTCRTVN 130
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
Y N I + + +I L+ + L E G + + E+ + K D
Sbjct: 131 NKYIFNSIKRFAYKKNIVLLGTSRLVELAESKVYGNLVSKLELIDILNPWLN--LKKIPD 188
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV-------FD 246
IVL CTH+ + + + P +D+S+ + + LL + +
Sbjct: 189 TIVLGCTHFSWLKSELQSVLPVDSCLIDSSNRLINHIKYLLNSRCLKKKNKCYFDVLLYQ 248
Query: 247 DHALFL--SGKPDIAMRRLMQGFGL 269
+ A + + L+ +
Sbjct: 249 NKAYYTMHTADIVKLRSILLFNYNF 273
>gi|77412365|ref|ZP_00788676.1| glutamate racemase [Streptococcus agalactiae CJB111]
gi|77161585|gb|EAO72585.1| glutamate racemase [Streptococcus agalactiae CJB111]
Length = 159
Score = 155 bits (391), Expect = 9e-36, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 1/155 (0%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V+++M +PE I++ D PYG +++ + + +L
Sbjct: 3 SRPIGFLDSGVGGLTVVKEMFRQLPEEEVIFIGDQARAPYGPRPAQQIREFTWQMVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
K + VIACNTA + E++ +P A T SG + I+ TP T+
Sbjct: 63 TK-NVKMIVIACNTATAVAWQEIKEKLDIPVLGVILPGASAAIKSTNSGKVGIIGTPMTV 121
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC 167
+ I + + ++ VE C
Sbjct: 122 KSDAYRQKIQALSPNTAVVSLACPKFVPIVESIRC 156
>gi|32490882|ref|NP_871136.1| hypothetical protein WGLp133 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|81741819|sp|Q8D368|MURI_WIGBR RecName: Full=Glutamate racemase
gi|25166088|dbj|BAC24279.1| murI [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 268
Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 63/263 (23%), Positives = 124/263 (47%), Gaps = 6/263 (2%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K + ILIFDSGIGGL ++R +P ++IYV D+ GFPYGN + + R+ +
Sbjct: 1 MKNKLQILIFDSGIGGLYFYSEIRKYIPHANYIYVLDNEGFPYGNKYKNFIFDRVTNIII 60
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ + Y+ L+++ACNTA ++ L+ F S +G P I ++ T++ +I +L+T
Sbjct: 61 YMHNLYKFDLTIVACNTASSIALSYLKKFFIS-PVIGIKPDINESVNITKNNIIGLLATK 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ ++ +++ + + + L EE G I ++IK ++
Sbjct: 120 ITINYVLSNFFNFKSLNKIKLITLDANELIKLSEEKMRGKIIHLNKIKNILKPIL--LNK 177
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
D I+L CTH + F+++ P ++D+ + ++ L+ + ++
Sbjct: 178 NIPDTIILGCTHLLFFYYEFKKIFPIGTKFIDSKKILLNKSIMLISENYIKKNKIKHQTV 237
Query: 250 LFLSGKPDIAMRR--LMQGFGLK 270
+ + + L+ +G K
Sbjct: 238 YY-TKNNRYFKKICPLLNKYGFK 259
>gi|163749944|ref|ZP_02157189.1| glutamate racemase [Shewanella benthica KT99]
gi|161330458|gb|EDQ01437.1| glutamate racemase [Shewanella benthica KT99]
Length = 254
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 64/250 (25%), Positives = 110/250 (44%), Gaps = 28/250 (11%)
Query: 44 VADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMA 103
+ D+ PYG + L + L +D + K + VIACNTA TLI LR+ ++
Sbjct: 1 MFDNARLPYGELAEQELISGCVALITDFVQKQSVSMVVIACNTASTLILPSLRAVL-NIP 59
Query: 104 FLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE 163
+G VPAIK AA +++ I +L+TP T++R YT LI + S C + L ++ L E
Sbjct: 60 VVGVVPAIKPAALLSRNKHIGLLATPGTIKRAYTHELIAQFASGCSVELYATSELVMLAE 119
Query: 164 EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNS 223
+ A G + + E + D +VL CTH+P++ ++ V LD+
Sbjct: 120 QKAAGDPVTQQE----LAQILSPILESELDTLVLGCTHFPILKQEMQEYLGDRVSLLDSG 175
Query: 224 DSIARRA--------------------RCLLPRINTHQTRV---FDDHALFLSGKPDIAM 260
++A R R ++ +++ A + S + +
Sbjct: 176 KAVAARVLTLKLQTQQEWVLAKQDNECRDVIRERVEQESKNMLYGTGLAYYTSEEIGQGL 235
Query: 261 RRLMQGFGLK 270
++ + FGL
Sbjct: 236 KKTLAKFGLS 245
>gi|187917978|ref|YP_001883541.1| glutamate racemase [Borrelia hermsii DAH]
gi|119860826|gb|AAX16621.1| glutamate racemase [Borrelia hermsii DAH]
Length = 254
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 59/263 (22%), Positives = 113/263 (42%), Gaps = 16/263 (6%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
L++ I+IFDSGIGGL + + +++Y+AD+ FPYG L K ++ L
Sbjct: 1 MSNLEDVIVIFDSGIGGLSYFEYISKRFVNRNYVYIADNKNFPYGEKSPEFLLKEILELV 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ Y VIACNTA + D+L FP + L +V +++ A + +++T
Sbjct: 61 LKLEQMYNIASIVIACNTASISVYDKLNLRFPIIYTLPSVGLVEELA----CKRVILIAT 116
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
+T+ + + ++ L S+ L + VE +++ + + +E E
Sbjct: 117 SSTINSEFVQREKKCH---WNLILKSASELVNFVEYGDR----FKEDALRYLRALQLEVE 169
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
R D++ L CTHY I + + +N + +A +L +
Sbjct: 170 ANRRDMVFLGCTHYLHIKDMIESFLG--IPVYENRELVANELAKVLG--PIKCSDNCFIR 225
Query: 249 ALFLSGKPDI-AMRRLMQGFGLK 270
+L+ ++ + + +GL
Sbjct: 226 YFYLTQDENLCFYKNFCKRYGLH 248
>gi|213420373|ref|ZP_03353439.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E01-6750]
Length = 156
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 60/156 (38%), Positives = 94/156 (60%), Gaps = 1/156 (0%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 2 LVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R Y
Sbjct: 62 LSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRPY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172
T LI + ++C I ++ S L E G +
Sbjct: 121 THELIARFANECQIAMLGSAELVELAEAKLHGDSVS 156
>gi|160901642|ref|YP_001567223.1| glutamate racemase [Petrotoga mobilis SJ95]
gi|160359286|gb|ABX30900.1| glutamate racemase [Petrotoga mobilis SJ95]
Length = 263
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 47/261 (18%), Positives = 106/261 (40%), Gaps = 20/261 (7%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
M + +P K I +FDSGIGGL VL+K+ + + Y+AD++ PYG+ L
Sbjct: 1 MGVRYFPIMK-----IGLFDSGIGGLTVLKKVIENFGNHEYFYLADNLNVPYGSKPIPFL 55
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFP-SMAFLGAVPAIKQAAAYTQ 119
++ L + S K + + ACNT +++K T + ++ + + +
Sbjct: 56 RENLKNILSFF-QKMKVDFLISACNTTDSIVKKTNFDTKNYNFTYVSIIDNAIKTIE--R 112
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+ + +L+T T+ + ++ + + +EE ++ E ++
Sbjct: 113 NDTVLLLATENTINLGAYKEAL-ISKKITNLEEKACPLFVPLIEEGYWDGQMAESVLRFY 171
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
++ + ++L CTHYP++ R+ + + +D +D + + +
Sbjct: 172 LQDS-----KSKYHKVILGCTHYPILEKQIRKYTNSSI--VDPADGVVDFLKNEIK---L 221
Query: 240 HQTRVFDDHALFLSGKPDIAM 260
+ ++G +
Sbjct: 222 ERIDGKIKVNFLVTGNLEKFK 242
>gi|207742838|ref|YP_002259230.1| glutamate racemase (n terminal fragment) protein [Ralstonia
solanacearum IPO1609]
gi|206594232|emb|CAQ61159.1| probable glutamate racemase (n terminal fragment) protein
[Ralstonia solanacearum IPO1609]
Length = 141
Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats.
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 2/140 (1%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
+ Q + +FDSG+GGL VL+ +R +P +Y+AD PYG + +R + +
Sbjct: 4 RAQAPVGVFDSGLGGLSVLRAIRAELPAESLLYLADSRHAPYGEKSPEFIAERTLRVCE- 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L VIACNTA LR ++ +G P +K A A +QS ++ +L+T +
Sbjct: 63 WLVGQGCKALVIACNTATAQAVHLLRERL-AVPVIGVEPGLKPAVATSQSRVVGVLATES 121
Query: 131 TLRRTYTSNLIHSYVSQCHI 150
TLR + L+ + C +
Sbjct: 122 TLRSDKFARLLGNVSGDCQV 141
>gi|325479835|gb|EGC82920.1| glutamate racemase [Anaerococcus prevotii ACS-065-V-Col13]
Length = 249
Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats.
Identities = 51/217 (23%), Positives = 92/217 (42%), Gaps = 9/217 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GGL VL+++ + + Y D + PYG E + + L+ Y
Sbjct: 4 IGIFDSGLGGLTVLRELIKTN-KASYFYFGDTLRVPYGGREKEEIISFAEDIVD-YLENY 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+IACNT L D L+ + + F+ +A+ G +L T T+
Sbjct: 62 NIDYYIIACNTISVLATDILKEKY-NKDFIPITDMGLRASLAC-DGDFLVLGTKTTVNSH 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ N I ++ V++ L +E + E+ +K ++ K+ I
Sbjct: 120 FYKNNIEKL-KDAKVYEVAATKLVDLIE----SGTLDEENLKFYLDDYLQIANEKKIPNI 174
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232
+LACTHYP+I + + + +D + ++ +
Sbjct: 175 ILACTHYPIIRDSIEKRLTYKANIIDPASYASKFLKS 211
>gi|47093489|ref|ZP_00231251.1| glutamate racemase [Listeria monocytogenes str. 4b H7858]
gi|47018107|gb|EAL08878.1| glutamate racemase [Listeria monocytogenes str. 4b H7858]
Length = 211
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 39/201 (19%), Positives = 68/201 (33%), Gaps = 5/201 (2%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
++ L + VIACNTA ++R P + A T++ I +L
Sbjct: 1 MTNFLVDRGIKMLVIACNTATAAALYDIREKLDIPVIGVIQPGSRAALKATRNNKIGVLG 60
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T T+ + + + ++ S VE KK + +
Sbjct: 61 TLGTVESMAYPTALKGLNRRVEVDSLACPKFVSVVESGEYK----SAIAKKVVAESLLPL 116
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFD 246
+ + D ++L CTHYPL+ + V +++ + A LL N T
Sbjct: 117 KSTKIDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDATDEEI 176
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
+H F +G I
Sbjct: 177 EHRFFTTGSTQIFKDIAKDWL 197
>gi|30959110|gb|AAO73314.1| glutamate racemase [Helicobacter pylori]
Length = 231
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 49/226 (21%), Positives = 88/226 (38%), Gaps = 15/226 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
+Q L ++ACNTA L +E++ P+I ++ I +L T AT+
Sbjct: 61 HQIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVKDKNASILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + +I +++ + +EE G + ++ + F +
Sbjct: 121 QSNAYDNALKQQGY-LNISHLATSLFVPLIEESILGG----ELLETCMRYYFTPLKI-LP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARC 232
+VI+L CTH+PLI + + D+I +
Sbjct: 175 EVIILGCTHFPLIAQKIESYFMEHFALLTPPLLIHSGDAIVEYLQQ 220
>gi|56459706|ref|YP_154987.1| glutamate racemase [Idiomarina loihiensis L2TR]
gi|56178716|gb|AAV81438.1| Glutamate racemase [Idiomarina loihiensis L2TR]
Length = 248
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 43/259 (16%), Positives = 91/259 (35%), Gaps = 16/259 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
+ +FDSG+GGL V + ++ +Y D PYG+ + + + + +
Sbjct: 2 KVGVFDSGVGGLTVARSLQQSGCFSELLYYGDTARVPYGSKDSNTVTRYALEAVEFFNGA 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ---SGLISILSTPAT 131
V+ACNT ++++ + P + S + +++T +T
Sbjct: 62 -DVDCLVVACNTVSVTALEQMQKFSNKPVYGVLEPGVMALEQLQGIDTSAQVLVIATRST 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ I + ++ +++ + VEE I ++ K
Sbjct: 121 INSGAYQQQIQALGYN-QVNAMATPLFVPIVEEELYDGPILQETFKHYFGKLEKP----- 174
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
DV++L CTH+PLI + + +++ + L + +
Sbjct: 175 -DVVLLGCTHFPLIAESISAYF-NGAKTIHSGEAMLAWLKQHL---DLSAQFDRTPLHII 229
Query: 252 LSGKPDIAMRRLMQGFGLK 270
+ D R + GLK
Sbjct: 230 ATENVDAVKRTATRW-GLK 247
>gi|257066004|ref|YP_003152260.1| glutamate racemase [Anaerococcus prevotii DSM 20548]
gi|256797884|gb|ACV28539.1| glutamate racemase [Anaerococcus prevotii DSM 20548]
Length = 250
Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 49/219 (22%), Positives = 95/219 (43%), Gaps = 13/219 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+++ + Y D + PYG + L++ + L+K+
Sbjct: 4 IGVFDSGLGGLTVLRELAKTNKS-QYFYFGDSLRVPYGGRSEEELRRFSADIVD-FLEKF 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL--ISILSTPATLR 133
VIACNT + D LR + +P + A ++ +L T T+
Sbjct: 62 DIDYYVIACNTLSVTVTDFLREKYDKKF----IPITELALKASEKYQGKFLVLGTKTTIN 117
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ N + + ++ V++ L +E K + ++ + I+ K+ +
Sbjct: 118 SHFYKNNLEK-NPRNTVYEVAASKLVDLIE----ADKKDDKKLNEYIDSYIKIANDKKIE 172
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232
I+LACTHYP+I + + + +D + +++
Sbjct: 173 NILLACTHYPIIRENIERRLDYKANIIDPAIFLSQSLES 211
>gi|30959108|gb|AAO73313.1| glutamate racemase [Helicobacter pylori]
Length = 231
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 50/227 (22%), Positives = 92/227 (40%), Gaps = 17/227 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARC 232
+VI+L CTH+PLI H P P + + D+I +
Sbjct: 174 PEVIILGCTHFPLIAHQIEGYFMGHFALPTPPLLIHSGDAIVEYLQQ 220
>gi|161527572|ref|YP_001581398.1| glutamate racemase [Nitrosopumilus maritimus SCM1]
gi|160338873|gb|ABX11960.1| Glutamate racemase [Nitrosopumilus maritimus SCM1]
Length = 251
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 56/258 (21%), Positives = 109/258 (42%), Gaps = 17/258 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+G L ++++M+ IY AD +PYG L +R+M ++L+K
Sbjct: 3 KIAVFDSGLGSLSIIKEMQKAFKSE-IIYFADQQSYPYGKKSQAQL-ERIMRKSINLLEK 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ P V+A NT ++ + P +K+A T+S I IL+T + +
Sbjct: 61 FSPDFIVVASNTPSLML------DLGTNRIFVVKPPLKEAKKITKSKQIGILATESATKS 114
Query: 135 TYTSNLIHSYVSQ-CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
S I + + I ++ L VE ++ +K I+ + D
Sbjct: 115 KGLSKYIQENIPKSFKIFKINGTKLVDLVESGKF--LTEKKYCEKIIKKKLEILNENQID 172
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+ L+ TH P + + P + ++D + +A++ + ++ + +F S
Sbjct: 173 AVTLSSTHLPFLKKYLEKEFP-NIQFVDPGNIVAQKIYFKIK----NKQSKKNSLKIFTS 227
Query: 254 GKPDIAMRRLMQGFGLKS 271
G +L + G+K+
Sbjct: 228 GNTKEFQLKLSK-IGIKN 244
>gi|326385030|ref|ZP_08206702.1| glutamate racemase [Gordonia neofelifaecis NRRL B-59395]
gi|326196244|gb|EGD53446.1| glutamate racemase [Gordonia neofelifaecis NRRL B-59395]
Length = 220
Score = 148 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 43/216 (19%), Positives = 82/216 (37%), Gaps = 9/216 (4%)
Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV-PAIKQA 114
++K + + + L + VIACNTA + R + + + + PA+++A
Sbjct: 2 SIPEIRKHALAIGDE-LVQRGVKAIVIACNTASAACLRDARERYAPIPVIEVILPAVRRA 60
Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174
T++G I ++ T AT+ + + I V VE +
Sbjct: 61 VVATKTGRIGVIGTEATIASRAYQDSFAA-ARDVEITAVPCPRFVDFVERGITSGR---- 115
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+I EG + D +VL CTHYPL+ V + + V + +++ A+ +L
Sbjct: 116 QILGLAEGYLEPLQEADVDTLVLGCTHYPLLSGVVQLVMGDEVTLVSSAEETAKDTFRVL 175
Query: 235 PRINTHQTRVF--DDHALFLSGKPDIAMRRLMQGFG 268
+T +G P+ + + G
Sbjct: 176 TESDTLHPHTNRQARRQFSATGDPESFRKLSTRFLG 211
>gi|153847805|ref|ZP_01993956.1| glutamate racemase [Vibrio parahaemolyticus AQ3810]
gi|149744710|gb|EDM56178.1| glutamate racemase [Vibrio parahaemolyticus AQ3810]
Length = 214
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 2/176 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
+ +L+FDSG+GGL V Q++ L+P + Y+ D+ +PYG + + L R+ L S ++
Sbjct: 40 KKKVLVFDSGVGGLSVFQEIHQLLPHLDYFYLFDNEAYPYGELDQNVLISRVNQLVSALV 99
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ + VIACNTA T++ LR S+ +G VPAIK A+ + + +++TPAT+
Sbjct: 100 AEHHIDIVVIACNTASTIVLPSLRDNL-SVPVVGVVPAIKPASLL-ATQGVGLIATPATV 157
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
R YT LI + + L+ S L EE G + DE+K + + +
Sbjct: 158 TRQYTHELIRDFAQGKPVELLGSTRLVDMAEEKLRGESVPLDELKSILSPLCNKVD 213
>gi|313892611|ref|ZP_07826198.1| putative glutamate racemase [Dialister microaerophilus UPII 345-E]
gi|313119008|gb|EFR42213.1| putative glutamate racemase [Dialister microaerophilus UPII 345-E]
Length = 257
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 57/257 (22%), Positives = 101/257 (39%), Gaps = 15/257 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I I DSG+GGL V + +R PE I++ D PYG H + L
Sbjct: 3 NRPIGIMDSGVGGLTVARVLRQKYPEESIIFIGDTANNPYGERTSHEINVLAGK-MKKFL 61
Query: 73 DKYQPVLSVIACNTAFT-LIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ +IACNT + K+ P +P + A + T + +TPAT
Sbjct: 62 ISKNVKMIIIACNTITFNVQKNFYDEKIPIEGMSLDLPHFENAGSIT------VFATPAT 115
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ N I I + LA +E ++I + ++ +++
Sbjct: 116 INLHIHKNKIKEKFPNSKIEEMPCEGLAHAIE-----ENNSREKITEILKKIIEKRKISP 170
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
TD+ + ACTHYPL+ VF+++ W D ++S + ++ + + +
Sbjct: 171 TDIGIFACTHYPLVEDVFKKIWNKTKFW-DPAESTVEN-SMKKLKKENKKSESYTEDLFY 228
Query: 252 LSGKPDIAMRRLMQGFG 268
+ + A + + FG
Sbjct: 229 FTENAERAEILVKKFFG 245
>gi|332653705|ref|ZP_08419449.1| glutamate racemase [Ruminococcaceae bacterium D16]
gi|332516791|gb|EGJ46396.1| glutamate racemase [Ruminococcaceae bacterium D16]
Length = 278
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 56/246 (22%), Positives = 101/246 (41%), Gaps = 10/246 (4%)
Query: 26 LIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACN 85
V +++R +P + +Y D PYGN + ++ + + L V ACN
Sbjct: 18 FSVARRVRRQLPNENILYFGDGGNNPYGNHTAEEILSLTRYMLDFMRQRQVKALLV-ACN 76
Query: 86 TAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYV 145
T LI + R L V A ++AA+ + ++ST T LI
Sbjct: 77 TISCLIDEYRREM--DCPVLSVVQAGAESAAHRPEKRVGVISTCFTASTGCYPALIAQLA 134
Query: 146 SQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLI 205
+ + LA+ VE A +I +E+++ ++G + + + +LACTHYPL+
Sbjct: 135 PEKKVFSRGYKNLAAMVEHGASQQEID-EELRENLDGLVHQ---DQVECCLLACTHYPLV 190
Query: 206 VHVFRQLSPWPVDWLDNSDSIARRARCLLPR-INTHQTRVFDDHALFLSGKPDIAMRRLM 264
R+L P + +D +D +AR L + ++ + P +R
Sbjct: 191 EENIRRLYPQ-LQLVDPADRMARELERCLKETRQISRRSEPGTLEIYTTADPQEYIRAAR 249
Query: 265 QGFGLK 270
+ GL+
Sbjct: 250 RA-GLE 254
>gi|30961743|gb|AAP39988.1| glutamate racemase [Helicobacter acinonychis]
Length = 232
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 48/228 (21%), Positives = 91/228 (39%), Gaps = 19/228 (8%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FD+G+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDTGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDSATIKQFSLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP---AIKQAAAYTQSGLISILSTPA 130
++ L ++ACNTA L + ++ P AIKQ ++ I +L T A
Sbjct: 60 PHEIELLIVACNTASALALETMQKHSKIPIVGVIEPSILAIKQHVKD-KNTPILVLGTKA 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+R + N + ++ +++ + +EE + ++ + F +
Sbjct: 119 TIRSSAYDNALKQQGY-LNVSHLATSLFVPLIEENVLEG----ELLETCMRYYFAPLKIF 173
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARC 232
+VI+L CTH+PLI + + D+I +
Sbjct: 174 -PEVIILGCTHFPLIAQKIESYFVEHFALSTPPLLIHSGDAIVEYLQQ 220
>gi|329121243|ref|ZP_08249870.1| glutamate racemase [Dialister micraerophilus DSM 19965]
gi|327470177|gb|EGF15640.1| glutamate racemase [Dialister micraerophilus DSM 19965]
Length = 257
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 56/257 (21%), Positives = 102/257 (39%), Gaps = 15/257 (5%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I I DSG+GGL V + +R PE I++ D PYG H + L
Sbjct: 3 NRPIGIMDSGVGGLTVARVLRQKYPEESIIFIGDTANNPYGERTSHEINVLAGK-MKKFL 61
Query: 73 DKYQPVLSVIACNTAFT-LIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ +IACNT + K+ P +P + A + T + +TPAT
Sbjct: 62 ISKNVKMIIIACNTITFNVQKNFYDEKIPIEGMSLDLPHFENAGSIT------VFATPAT 115
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ N I I + LA +E ++I + ++ +++
Sbjct: 116 INLHIHKNKIKEKFPNSKIEEMPCEGLAHAIE-----ENNSREKITEILKKIIEKRKISP 170
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
TD+ + ACTHYPL+ VF+++ ++ D ++S + ++ + + +
Sbjct: 171 TDIGIFACTHYPLVEDVFKKI-WNKTEFWDPAESTVEN-SMKKLKKENKKSESYTEDLFY 228
Query: 252 LSGKPDIAMRRLMQGFG 268
+ + A + + FG
Sbjct: 229 FTENAERAEILVKKFFG 245
>gi|197693862|gb|ACH71600.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 145 bits (367), Expect = 4e-33, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 81/208 (38%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPATIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-----ELLETCMRYYFTLLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|195937619|ref|ZP_03083001.1| glutamate racemase [Escherichia coli O157:H7 str. EC4024]
Length = 143
Score = 145 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 55/143 (38%), Positives = 91/143 (63%), Gaps = 1/143 (0%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + ++Y
Sbjct: 2 LVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++R+Y
Sbjct: 62 LALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSY 120
Query: 137 TSNLIHSYVSQCHIHLVSSMILA 159
T LI + ++C I ++ S +
Sbjct: 121 THELIARFANECQIEMLGSAEMV 143
>gi|291277066|ref|YP_003516838.1| putative glutamate racemase [Helicobacter mustelae 12198]
gi|290964260|emb|CBG40109.1| putative glutamate racemase [Helicobacter mustelae 12198]
Length = 309
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 47/217 (21%), Positives = 79/217 (36%), Gaps = 10/217 (4%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
IFDSG GGL VL+ + IY D PYG ++ + L
Sbjct: 4 GIFDSGAGGLSVLEHVLRAEIFDSIIYYGDTARLPYGTKHPDSIICFCLEALE-FLLVQN 62
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA---YTQSGLISILSTPATLR 133
+ ++ACNTA D ++ P + +G + A I +L T AT++
Sbjct: 63 VDIIIVACNTASAHALDAMQKAAPKIPIIGVIEPGILAIKNRLKNLDAKILVLGTKATIQ 122
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ +I + + + S VEE + E+ ++ G D
Sbjct: 123 SAQYQRHLEKLGY-SNITAIPTSLFVSLVEEGIFEGPLVEECLRYYFGG-----IDFVPD 176
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
I+L CTH+PL+ + ++I +
Sbjct: 177 AIILGCTHFPLLQKPIAAYFQNKSLLIHAGEAIVQYI 213
>gi|203287567|ref|YP_002222582.1| glutamate racemase [Borrelia recurrentis A1]
gi|201084787|gb|ACH94361.1| glutamate racemase [Borrelia recurrentis A1]
Length = 254
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 59/260 (22%), Positives = 110/260 (42%), Gaps = 16/260 (6%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
L++ I+IFDSGIGGL + + + ++IYVAD+ FPYG+ + + + L S
Sbjct: 3 NLEDVIVIFDSGIGGLAYFEYISKKLFNRNYIYVADNKNFPYGDKSSNFILNEFLELISK 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+ + Y V V+ACNTA + ++L FP + L +V +K+ + +++T
Sbjct: 63 LREIYNIVSIVVACNTASISVYNKLNFNFPIIYTLPSVSLVKELVF----KRVILIATNT 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + + + L S+ L VE I E + + ++ E +
Sbjct: 119 TINSEFVKKE---QNNHIDLILKSAGELVKFVEY----GDIFEKDALEYLKSLKFEVQST 171
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
+ D++ L CTHY I + + + DN +A L N +
Sbjct: 172 KRDMVFLGCTHYLHIKDMIESVL--EIPVYDNRKIVADELNKSLK--NVENSDYCFKRYF 227
Query: 251 FLSGKPD-IAMRRLMQGFGL 269
+L+ + + + +
Sbjct: 228 YLTQDKNLHFYKNFCKKYNF 247
>gi|203284025|ref|YP_002221765.1| glutamate racemase [Borrelia duttonii Ly]
gi|201083468|gb|ACH93059.1| glutamate racemase [Borrelia duttonii Ly]
Length = 254
Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats.
Identities = 59/246 (23%), Positives = 106/246 (43%), Gaps = 15/246 (6%)
Query: 11 KLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD 70
L++ I+IFDSGIGGL + + + ++IYVAD+ FPYG+ + + + L S
Sbjct: 3 NLEDVIVIFDSGIGGLAYFEYISKKLFNRNYIYVADNKNFPYGDKSSNFILNEFLELISK 62
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+ + Y V V+ACNTA + ++L FP + L +V +K+ + +++T
Sbjct: 63 LREIYNIVSIVVACNTASISVYNKLNFNFPIIYTLPSVSLVKELL----CKRVILIATNT 118
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ + + + L S+ L VE I E + + ++ E +
Sbjct: 119 TINSEFVKKE---QNNHIDLILKSAGELVKFVEY----GDIFEKDALEYLKSLKFEVQST 171
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
+ D++ L CTHY I + + + DN +A L N +
Sbjct: 172 KRDMVFLGCTHYLHIKDMIESVL--EIPVYDNRKIVADELNKSLK--NVENSDYCFKRYF 227
Query: 251 FLSGKP 256
+L+
Sbjct: 228 YLTQDK 233
>gi|138999530|dbj|BAF51348.1| glutamate recemase [Streptococcus mutans]
gi|138999536|dbj|BAF51349.1| glutamate recemase [Streptococcus mutans]
Length = 141
Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 1/142 (0%)
Query: 21 SGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80
SG+GGL V++++ +P IY+ D PYG +K L + +L K + +
Sbjct: 1 SGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKTYTWELVNFLLTK-KVKMI 59
Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNL 140
V ACNTA ++ +E++ +P A T SG I I+ TP T++
Sbjct: 60 VFACNTATAVVWEEVKEKLDIPVLGVILPGSSAAIKSTISGQIGIIGTPMTIKSNIYEQK 119
Query: 141 IHSYVSQCHIHLVSSMILASRV 162
I Q + ++ V
Sbjct: 120 IRDLSPQMKVRSLACPKFVPIV 141
>gi|126728656|ref|ZP_01744471.1| Glutamate racemase [Sagittula stellata E-37]
gi|126710586|gb|EBA09637.1| Glutamate racemase [Sagittula stellata E-37]
Length = 251
Score = 145 bits (365), Expect = 8e-33, Method: Composition-based stats.
Identities = 46/248 (18%), Positives = 85/248 (34%), Gaps = 19/248 (7%)
Query: 33 RFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIK 92
+P+ F+Y AD PYG + + + S L L V+ACNTA
Sbjct: 1 MKRLPDVPFVYFADSAHAPYGVRDANDIYDLTTQAVSR-LWDEGCDLVVLACNTASAAAL 59
Query: 93 DELRSTFP--SMAFLGAVPAIKQAAAYTQS-----------GLISILSTPATLRRTYTSN 139
++ ++ LG + +A Q +++ +TPAT+R
Sbjct: 60 RRMQESWVPRDKRVLGVFVPLIEALTARQWGDNSPPREVGIQHVALFATPATVRSRAFQR 119
Query: 140 LIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLAC 199
+ + + L +EE + + E ++ ++ +++ + +L C
Sbjct: 120 ELAFRAIGVDVEAQACGGLVDAIEEG--DMILAEALVRSHVDAL--KRKMPTPEAAILGC 175
Query: 200 THYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIA 259
THYPL+ +F+ V + + L R R +G P
Sbjct: 176 THYPLMQDIFQDALGPDVHVYSQATLVPDSLADYLDRHPDMLGRGTTS-RFLTTGDPARV 234
Query: 260 MRRLMQGF 267
R Q
Sbjct: 235 SRHATQFM 242
>gi|326795261|ref|YP_004313081.1| glutamate racemase [Marinomonas mediterranea MMB-1]
gi|326546025|gb|ADZ91245.1| Glutamate racemase [Marinomonas mediterranea MMB-1]
Length = 276
Score = 145 bits (365), Expect = 9e-33, Method: Composition-based stats.
Identities = 77/261 (29%), Positives = 113/261 (43%), Gaps = 12/261 (4%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD- 70
++ ++ I DSG GGL VL +R PE + Y AD PYG LK RL+ +
Sbjct: 1 MKYNVAIIDSGSGGLSVLNTIRRQSPELNLHYYADSCFSPYGEKSSEFLKSRLVQIGRYL 60
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
V+ACNTA D LR S+ +G PA+K A +S+L+TP
Sbjct: 61 EALSEPVHAIVLACNTATVEGIDALRRAV-SIPVVGVEPAVKPALVNPNVSRVSVLATPV 119
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T+ LI + + + L+SS LA ++ E + KEIE E
Sbjct: 120 TIGSNRLQALISLWKNDKQVQLISSADLARLID---SADSRSESALCKEIERICSEVTVF 176
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-----QTRVF 245
R DV+VLACTHYPL+ F V+ L+ S S++ + L + +
Sbjct: 177 RPDVLVLACTHYPLVRDRFEGSLH-GVEILEPSSSVSNQLIRRLEQEICIDCISDEGLPI 235
Query: 246 DDHALFLSGKPDIAMRRLMQG 266
L SG + ++ L +
Sbjct: 236 GGVTLHSSGD-EGDLKSLHRW 255
>gi|227486394|ref|ZP_03916710.1| possible glutamate racemase [Anaerococcus lactolyticus ATCC 51172]
gi|227235575|gb|EEI85590.1| possible glutamate racemase [Anaerococcus lactolyticus ATCC 51172]
Length = 249
Score = 145 bits (365), Expect = 9e-33, Method: Composition-based stats.
Identities = 56/250 (22%), Positives = 103/250 (41%), Gaps = 18/250 (7%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+GG+ VL ++ + ++ Y+ D++ PYGN + + + L+ Y
Sbjct: 4 IGIFDSGLGGIAVLNELAKKN-KANYFYLGDNLRVPYGNRSKAEITSFATDIVN-FLEGY 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+IACNT KD LR F A AI+ A Y G L T AT+
Sbjct: 62 DIDYYIIACNTISVTCKDYLREKFKKKFITIADMAIEAAMEY--DGDYLALGTKATMESH 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ + + C ++ ++ L + +E G ++ + ++ K+ I
Sbjct: 120 FYKTTLEA-KKPCKVYESKAIDLVNLIE----GGVLEGATLNGALDEYLSIANEKKLANI 174
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+LACTHYP+I + + + +D + +A N + +F++ +
Sbjct: 175 ILACTHYPIIKGEISKRLDYKANIIDPAVFLA---------DNIKTDDGANGVNIFMTKE 225
Query: 256 PDIAMRRLMQ 265
+ +
Sbjct: 226 SQETSALIKK 235
>gi|197693662|gb|ACH71500.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 144 bits (364), Expect = 9e-33, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 80/208 (38%), Gaps = 9/208 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
+Q L ++ACNTA L +E++ P+I ++ I +L T AT+
Sbjct: 61 HQIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVKDKNASILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE E+ + +
Sbjct: 121 QSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-----ELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWL 220
+V++L CTH+PLI L
Sbjct: 175 EVVILGCTHFPLIAQKIESYFMEHFALL 202
>gi|226326749|ref|ZP_03802267.1| hypothetical protein PROPEN_00609 [Proteus penneri ATCC 35198]
gi|225204586|gb|EEG86940.1| hypothetical protein PROPEN_00609 [Proteus penneri ATCC 35198]
Length = 206
Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 62/202 (30%), Positives = 100/202 (49%), Gaps = 3/202 (1%)
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
+ +K+ VIACNTA T+ LR+ F + +G VPAIK AA T +G++ +L+T A
Sbjct: 1 MAEKHFLAAIVIACNTASTVSLPALRAKFTDIPIVGVVPAIKPAAKLTCNGVVGLLATRA 60
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
T++R YT LI + + C +H + S L E G ++ D ++K + KE
Sbjct: 61 TVKRPYTHELIERFATDCKVHSLGSAELVELAERKLHGEEVSLDALRKILTPWLKMKEPP 120
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
D +VL CTH+PL+ + P +D+ +IARR L+ + A
Sbjct: 121 --DTVVLGCTHFPLLADELLSVLPDGTRIIDSGAAIARRTAWLVVNQAKIKGSNEISFAY 178
Query: 251 FLS-GKPDIAMRRLMQGFGLKS 271
L + ++ ++ GFG +S
Sbjct: 179 CLKEDENSELLKPVLAGFGFES 200
>gi|197693858|gb|ACH71598.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 46/207 (22%), Positives = 81/207 (39%), Gaps = 9/207 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
+Q L V+ACNTA L +E++ P+I ++ I +L T AT+
Sbjct: 61 HQIKLLVVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE + ++ + F +
Sbjct: 121 QSNAYDNALKRQGY-LNVSHLATSLFVPLIEENILEG----ELLETCMRYYFTPLKI-LP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693570|gb|ACH71454.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP---AIKQAAAYTQSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P AIKQ ++ I +L T AT
Sbjct: 61 HQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQHVKD-KNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKRQGY-LNVSHLATSLFVPLIEENILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|138998500|dbj|BAF51362.1| glutamate recemase [Streptococcus mutans]
gi|138998505|dbj|BAF51363.1| glutamate recemase [Streptococcus mutans]
gi|138998507|dbj|BAF51364.1| glutamate recemase [Streptococcus mutans]
gi|138998509|dbj|BAF51365.1| glutamate recemase [Streptococcus mutans]
gi|138998515|dbj|BAF51366.1| glutamate recemase [Streptococcus mutans]
gi|138998517|dbj|BAF51367.1| glutamate recemase [Streptococcus mutans]
gi|138998519|dbj|BAF51368.1| glutamate recemase [Streptococcus mutans]
gi|138998522|dbj|BAF51369.1| glutamate recemase [Streptococcus mutans]
gi|138998524|dbj|BAF51370.1| glutamate recemase [Streptococcus mutans]
gi|138998529|dbj|BAF51371.1| glutamate recemase [Streptococcus mutans]
gi|138998531|dbj|BAF51372.1| glutamate recemase [Streptococcus mutans]
gi|138998533|dbj|BAF51373.1| glutamate recemase [Streptococcus mutans]
gi|138998536|dbj|BAF51374.1| glutamate recemase [Streptococcus mutans]
gi|138998538|dbj|BAF51375.1| glutamate recemase [Streptococcus mutans]
gi|138998545|dbj|BAF51376.1| glutamate recemase [Streptococcus mutans]
gi|138998547|dbj|BAF51377.1| glutamate recemase [Streptococcus mutans]
gi|138998549|dbj|BAF51378.1| glutamate recemase [Streptococcus mutans]
gi|138998551|dbj|BAF51379.1| glutamate recemase [Streptococcus mutans]
gi|138998557|dbj|BAF51380.1| glutamate recemase [Streptococcus mutans]
gi|138998559|dbj|BAF51381.1| glutamate recemase [Streptococcus mutans]
gi|138998565|dbj|BAF51382.1| glutamate recemase [Streptococcus mutans]
gi|138998567|dbj|BAF51383.1| glutamate recemase [Streptococcus mutans]
gi|138998573|dbj|BAF51384.1| glutamate recemase [Streptococcus mutans]
gi|138998575|dbj|BAF51385.1| glutamate recemase [Streptococcus mutans]
gi|138998579|dbj|BAF51386.1| glutamate recemase [Streptococcus mutans]
gi|138998581|dbj|BAF51387.1| glutamate recemase [Streptococcus mutans]
gi|138998586|dbj|BAF51388.1| glutamate recemase [Streptococcus mutans]
gi|138998588|dbj|BAF51389.1| glutamate recemase [Streptococcus mutans]
gi|138998590|dbj|BAF51390.1| glutamate recemase [Streptococcus mutans]
gi|138998596|dbj|BAF51391.1| glutamate recemase [Streptococcus mutans]
gi|138998599|dbj|BAF51392.1| glutamate recemase [Streptococcus mutans]
gi|138998601|dbj|BAF51393.1| glutamate recemase [Streptococcus mutans]
gi|138998608|dbj|BAF51394.1| glutamate recemase [Streptococcus mutans]
gi|138998610|dbj|BAF51395.1| glutamate recemase [Streptococcus mutans]
gi|138998612|dbj|BAF51396.1| glutamate recemase [Streptococcus mutans]
gi|138998618|dbj|BAF51397.1| glutamate recemase [Streptococcus mutans]
gi|138998620|dbj|BAF51398.1| glutamate recemase [Streptococcus mutans]
gi|138998627|dbj|BAF51399.1| glutamate recemase [Streptococcus mutans]
gi|138998629|dbj|BAF51400.1| glutamate recemase [Streptococcus mutans]
gi|138998631|dbj|BAF51401.1| glutamate recemase [Streptococcus mutans]
gi|138998636|dbj|BAF51402.1| glutamate recemase [Streptococcus mutans]
gi|138998638|dbj|BAF51403.1| glutamate recemase [Streptococcus mutans]
gi|138998640|dbj|BAF51404.1| glutamate recemase [Streptococcus mutans]
gi|138998647|dbj|BAF51405.1| glutamate recemase [Streptococcus mutans]
gi|138998649|dbj|BAF51406.1| glutamate recemase [Streptococcus mutans]
gi|138998654|dbj|BAF51407.1| glutamate recemase [Streptococcus mutans]
gi|138998656|dbj|BAF51408.1| glutamate recemase [Streptococcus mutans]
gi|138998662|dbj|BAF51409.1| glutamate recemase [Streptococcus mutans]
gi|138998664|dbj|BAF51410.1| glutamate recemase [Streptococcus mutans]
gi|138998667|dbj|BAF51411.1| glutamate recemase [Streptococcus mutans]
gi|138998672|dbj|BAF51412.1| glutamate recemase [Streptococcus mutans]
gi|138998678|dbj|BAF51413.1| glutamate recemase [Streptococcus mutans]
gi|138998680|dbj|BAF51414.1| glutamate recemase [Streptococcus mutans]
gi|138998685|dbj|BAF51415.1| glutamate recemase [Streptococcus mutans]
gi|138998690|dbj|BAF51416.1| glutamate recemase [Streptococcus mutans]
gi|138998697|dbj|BAF51417.1| glutamate recemase [Streptococcus mutans NN2025]
gi|138998699|dbj|BAF51418.1| glutamate recemase [Streptococcus mutans]
gi|138998701|dbj|BAF51419.1| glutamate recemase [Streptococcus mutans]
gi|138998704|dbj|BAF51420.1| glutamate recemase [Streptococcus mutans]
gi|138998706|dbj|BAF51421.1| glutamate recemase [Streptococcus mutans]
gi|138998712|dbj|BAF51422.1| glutamate recemase [Streptococcus mutans]
gi|138998714|dbj|BAF51423.1| glutamate recemase [Streptococcus mutans]
gi|138998718|dbj|BAF51424.1| glutamate recemase [Streptococcus mutans]
gi|138998720|dbj|BAF51425.1| glutamate recemase [Streptococcus mutans]
gi|138998726|dbj|BAF51426.1| glutamate recemase [Streptococcus mutans]
gi|138998734|dbj|BAF51427.1| glutamate recemase [Streptococcus mutans]
gi|138998769|dbj|BAF51437.1| glutamate recemase [Streptococcus mutans]
gi|138998771|dbj|BAF51438.1| glutamate recemase [Streptococcus mutans]
gi|138998776|dbj|BAF51439.1| glutamate recemase [Streptococcus mutans]
gi|138998779|dbj|BAF51440.1| glutamate recemase [Streptococcus mutans]
gi|138998781|dbj|BAF51441.1| glutamate recemase [Streptococcus mutans]
gi|138998787|dbj|BAF51442.1| glutamate recemase [Streptococcus mutans]
gi|138998792|dbj|BAF51443.1| glutamate recemase [Streptococcus mutans]
gi|138998794|dbj|BAF51444.1| glutamate recemase [Streptococcus mutans]
gi|138998797|dbj|BAF51445.1| glutamate recemase [Streptococcus mutans]
gi|138998799|dbj|BAF51446.1| glutamate recemase [Streptococcus mutans]
gi|138998803|dbj|BAF51447.1| glutamate recemase [Streptococcus mutans]
gi|138998805|dbj|BAF51448.1| glutamate recemase [Streptococcus mutans]
gi|138999538|dbj|BAF51350.1| glutamate recemase [Streptococcus mutans]
gi|138999544|dbj|BAF51351.1| glutamate recemase [Streptococcus mutans]
gi|138999546|dbj|BAF51352.1| glutamate recemase [Streptococcus mutans]
gi|138999550|dbj|BAF51353.1| glutamate recemase [Streptococcus mutans]
gi|138999552|dbj|BAF51354.1| glutamate recemase [Streptococcus mutans]
gi|138999554|dbj|BAF51355.1| glutamate recemase [Streptococcus mutans]
gi|138999559|dbj|BAF51356.1| glutamate recemase [Streptococcus mutans]
gi|138999565|dbj|BAF51357.1| glutamate recemase [Streptococcus mutans]
gi|138999567|dbj|BAF51358.1| glutamate recemase [Streptococcus mutans]
gi|138999574|dbj|BAF51359.1| glutamate recemase [Streptococcus mutans]
gi|138999576|dbj|BAF51360.1| glutamate recemase [Streptococcus mutans]
gi|138999578|dbj|BAF51361.1| glutamate recemase [Streptococcus mutans]
gi|195536350|dbj|BAG67898.1| glutamate recemase [Streptococcus mutans]
gi|195536352|dbj|BAG67899.1| glutamate recemase [Streptococcus mutans]
gi|195536354|dbj|BAG67900.1| glutamate recemase [Streptococcus mutans]
gi|195536356|dbj|BAG67901.1| glutamate recemase [Streptococcus mutans]
gi|195536358|dbj|BAG67902.1| glutamate recemase [Streptococcus mutans]
gi|195536360|dbj|BAG67903.1| glutamate recemase [Streptococcus mutans]
gi|195536362|dbj|BAG67904.1| glutamate recemase [Streptococcus mutans]
gi|195536364|dbj|BAG67905.1| glutamate recemase [Streptococcus mutans]
gi|195536366|dbj|BAG67906.1| glutamate recemase [Streptococcus mutans]
gi|195536368|dbj|BAG67907.1| glutamate recemase [Streptococcus mutans]
gi|195536370|dbj|BAG67908.1| glutamate recemase [Streptococcus mutans]
gi|195536372|dbj|BAG67909.1| glutamate recemase [Streptococcus mutans]
gi|195536374|dbj|BAG67910.1| glutamate recemase [Streptococcus mutans]
gi|195536376|dbj|BAG67911.1| glutamate recemase [Streptococcus mutans]
gi|195536378|dbj|BAG67912.1| glutamate recemase [Streptococcus mutans]
gi|195536380|dbj|BAG67913.1| glutamate recemase [Streptococcus mutans]
gi|195536382|dbj|BAG67914.1| glutamate recemase [Streptococcus mutans]
gi|195536384|dbj|BAG67915.1| glutamate recemase [Streptococcus mutans]
gi|195536386|dbj|BAG67916.1| glutamate recemase [Streptococcus mutans]
gi|195536388|dbj|BAG67917.1| glutamate recemase [Streptococcus mutans]
gi|195536390|dbj|BAG67918.1| glutamate recemase [Streptococcus mutans]
gi|195536392|dbj|BAG67919.1| glutamate recemase [Streptococcus mutans]
gi|195536394|dbj|BAG67920.1| glutamate recemase [Streptococcus mutans]
gi|195536396|dbj|BAG67921.1| glutamate recemase [Streptococcus mutans]
gi|195536398|dbj|BAG67922.1| glutamate recemase [Streptococcus mutans]
gi|195536400|dbj|BAG67923.1| glutamate recemase [Streptococcus mutans]
gi|195536402|dbj|BAG67924.1| glutamate recemase [Streptococcus mutans]
gi|195536404|dbj|BAG67925.1| glutamate recemase [Streptococcus mutans]
gi|195536406|dbj|BAG67926.1| glutamate recemase [Streptococcus mutans]
gi|195536408|dbj|BAG67927.1| glutamate recemase [Streptococcus mutans]
gi|195536410|dbj|BAG67928.1| glutamate recemase [Streptococcus mutans]
gi|195536412|dbj|BAG67929.1| glutamate recemase [Streptococcus mutans]
gi|195536414|dbj|BAG67930.1| glutamate recemase [Streptococcus mutans]
gi|195536416|dbj|BAG67931.1| glutamate recemase [Streptococcus mutans]
gi|195536418|dbj|BAG67932.1| glutamate recemase [Streptococcus mutans]
gi|195536420|dbj|BAG67933.1| glutamate recemase [Streptococcus mutans]
gi|195536422|dbj|BAG67934.1| glutamate recemase [Streptococcus mutans]
gi|195536424|dbj|BAG67935.1| glutamate recemase [Streptococcus mutans]
gi|195536426|dbj|BAG67936.1| glutamate recemase [Streptococcus mutans]
gi|195536428|dbj|BAG67937.1| glutamate recemase [Streptococcus mutans]
gi|195536430|dbj|BAG67938.1| glutamate recemase [Streptococcus mutans]
gi|195536432|dbj|BAG67939.1| glutamate recemase [Streptococcus mutans]
gi|195536434|dbj|BAG67940.1| glutamate recemase [Streptococcus mutans]
gi|195536436|dbj|BAG67941.1| glutamate recemase [Streptococcus mutans]
gi|195536438|dbj|BAG67942.1| glutamate recemase [Streptococcus mutans]
gi|195536440|dbj|BAG67943.1| glutamate recemase [Streptococcus mutans]
gi|195536442|dbj|BAG67944.1| glutamate recemase [Streptococcus mutans]
gi|195536444|dbj|BAG67945.1| glutamate recemase [Streptococcus mutans]
gi|195536446|dbj|BAG67946.1| glutamate recemase [Streptococcus mutans]
gi|195536448|dbj|BAG67947.1| glutamate recemase [Streptococcus mutans]
gi|195536450|dbj|BAG67948.1| glutamate recemase [Streptococcus mutans]
gi|195536452|dbj|BAG67949.1| glutamate recemase [Streptococcus mutans]
gi|195536454|dbj|BAG67950.1| glutamate recemase [Streptococcus mutans]
gi|195536456|dbj|BAG67951.1| glutamate recemase [Streptococcus mutans]
gi|195536458|dbj|BAG67952.1| glutamate recemase [Streptococcus mutans]
gi|195536460|dbj|BAG67953.1| glutamate recemase [Streptococcus mutans]
gi|195536462|dbj|BAG67954.1| glutamate recemase [Streptococcus mutans]
gi|195536464|dbj|BAG67955.1| glutamate recemase [Streptococcus mutans]
gi|195536466|dbj|BAG67956.1| glutamate recemase [Streptococcus mutans]
gi|195536468|dbj|BAG67957.1| glutamate recemase [Streptococcus mutans]
gi|195536470|dbj|BAG67958.1| glutamate recemase [Streptococcus mutans]
gi|195536472|dbj|BAG67959.1| glutamate recemase [Streptococcus mutans]
gi|195536474|dbj|BAG67960.1| glutamate recemase [Streptococcus mutans]
gi|195536476|dbj|BAG67961.1| glutamate recemase [Streptococcus mutans]
gi|195536478|dbj|BAG67962.1| glutamate recemase [Streptococcus mutans]
gi|195536480|dbj|BAG67963.1| glutamate recemase [Streptococcus mutans]
gi|195536482|dbj|BAG67964.1| glutamate recemase [Streptococcus mutans]
gi|195536484|dbj|BAG67965.1| glutamate recemase [Streptococcus mutans]
gi|195536486|dbj|BAG67966.1| glutamate recemase [Streptococcus mutans]
gi|195536488|dbj|BAG67967.1| glutamate recemase [Streptococcus mutans]
gi|195536490|dbj|BAG67968.1| glutamate recemase [Streptococcus mutans]
gi|195536492|dbj|BAG67969.1| glutamate recemase [Streptococcus mutans]
gi|195536494|dbj|BAG67970.1| glutamate recemase [Streptococcus mutans]
gi|195536496|dbj|BAG67971.1| glutamate recemase [Streptococcus mutans]
gi|195536498|dbj|BAG67972.1| glutamate recemase [Streptococcus mutans]
gi|195536500|dbj|BAG67973.1| glutamate recemase [Streptococcus mutans]
gi|195536502|dbj|BAG67974.1| glutamate recemase [Streptococcus mutans]
gi|195536504|dbj|BAG67975.1| glutamate recemase [Streptococcus mutans]
gi|195536506|dbj|BAG67976.1| glutamate recemase [Streptococcus mutans]
gi|195536508|dbj|BAG67977.1| glutamate recemase [Streptococcus mutans]
gi|195536510|dbj|BAG67978.1| glutamate recemase [Streptococcus mutans]
gi|195536512|dbj|BAG67979.1| glutamate recemase [Streptococcus mutans]
gi|195536514|dbj|BAG67980.1| glutamate recemase [Streptococcus mutans]
gi|195536516|dbj|BAG67981.1| glutamate recemase [Streptococcus mutans]
gi|195536518|dbj|BAG67982.1| glutamate recemase [Streptococcus mutans]
gi|195536520|dbj|BAG67983.1| glutamate recemase [Streptococcus mutans]
gi|195536522|dbj|BAG67984.1| glutamate recemase [Streptococcus mutans]
gi|195536524|dbj|BAG67985.1| glutamate recemase [Streptococcus mutans]
gi|195536526|dbj|BAG67986.1| glutamate recemase [Streptococcus mutans]
gi|195536528|dbj|BAG67987.1| glutamate recemase [Streptococcus mutans]
gi|195536530|dbj|BAG67988.1| glutamate recemase [Streptococcus mutans]
gi|195536532|dbj|BAG67989.1| glutamate recemase [Streptococcus mutans]
gi|195536534|dbj|BAG67990.1| glutamate recemase [Streptococcus mutans]
gi|195536536|dbj|BAG67991.1| glutamate recemase [Streptococcus mutans]
gi|195536538|dbj|BAG67992.1| glutamate recemase [Streptococcus mutans]
gi|195536540|dbj|BAG67993.1| glutamate recemase [Streptococcus mutans]
gi|195536542|dbj|BAG67994.1| glutamate recemase [Streptococcus mutans]
gi|195536544|dbj|BAG67995.1| glutamate recemase [Streptococcus mutans]
gi|195536546|dbj|BAG67996.1| glutamate recemase [Streptococcus mutans]
gi|195536548|dbj|BAG67997.1| glutamate recemase [Streptococcus mutans]
gi|195536550|dbj|BAG67998.1| glutamate recemase [Streptococcus mutans]
gi|195536552|dbj|BAG67999.1| glutamate recemase [Streptococcus mutans]
gi|195536554|dbj|BAG68000.1| glutamate recemase [Streptococcus mutans]
gi|195536556|dbj|BAG68001.1| glutamate recemase [Streptococcus mutans]
gi|195536558|dbj|BAG68002.1| glutamate recemase [Streptococcus mutans]
gi|195536560|dbj|BAG68003.1| glutamate recemase [Streptococcus mutans]
gi|195536562|dbj|BAG68004.1| glutamate recemase [Streptococcus mutans]
gi|195536564|dbj|BAG68005.1| glutamate recemase [Streptococcus mutans]
gi|195536566|dbj|BAG68006.1| glutamate recemase [Streptococcus mutans]
gi|195536568|dbj|BAG68007.1| glutamate recemase [Streptococcus mutans]
gi|195536570|dbj|BAG68008.1| glutamate recemase [Streptococcus mutans]
gi|195536572|dbj|BAG68009.1| glutamate recemase [Streptococcus mutans]
gi|195536574|dbj|BAG68010.1| glutamate recemase [Streptococcus mutans]
gi|195536576|dbj|BAG68011.1| glutamate recemase [Streptococcus mutans]
gi|195536578|dbj|BAG68012.1| glutamate recemase [Streptococcus mutans]
gi|195536580|dbj|BAG68013.1| glutamate recemase [Streptococcus mutans]
gi|195536582|dbj|BAG68014.1| glutamate recemase [Streptococcus mutans]
gi|195536584|dbj|BAG68015.1| glutamate recemase [Streptococcus mutans]
gi|195536586|dbj|BAG68016.1| glutamate recemase [Streptococcus mutans]
gi|195536588|dbj|BAG68017.1| glutamate recemase [Streptococcus mutans]
gi|195536590|dbj|BAG68018.1| glutamate recemase [Streptococcus mutans]
gi|195536592|dbj|BAG68019.1| glutamate recemase [Streptococcus mutans]
gi|195536594|dbj|BAG68020.1| glutamate recemase [Streptococcus mutans]
gi|195536608|dbj|BAG68027.1| glutamate recemase [Streptococcus mutans]
gi|195536610|dbj|BAG68028.1| glutamate recemase [Streptococcus mutans]
gi|195536612|dbj|BAG68029.1| glutamate recemase [Streptococcus mutans]
gi|195536614|dbj|BAG68030.1| glutamate recemase [Streptococcus mutans]
gi|195536616|dbj|BAG68031.1| glutamate recemase [Streptococcus mutans]
gi|195536618|dbj|BAG68032.1| glutamate recemase [Streptococcus mutans]
gi|195536620|dbj|BAG68033.1| glutamate recemase [Streptococcus mutans]
Length = 141
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 1/142 (0%)
Query: 21 SGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80
SG+GGL V++++ +P IY+ D PYG +K L + +L K + +
Sbjct: 1 SGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKTYTWELVNFLLTK-KVKMI 59
Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNL 140
V ACNTA ++ +E++ +P A T SG I I+ TP T++
Sbjct: 60 VFACNTATAVVWEEVKEKLDIPVLGVILPGSSAAIKSTISGQIGIIGTPMTIKSNIYEQK 119
Query: 141 IHSYVSQCHIHLVSSMILASRV 162
I Q + ++ V
Sbjct: 120 ILDLSPQMKVRSLACPKFVPIV 141
>gi|197693566|gb|ACH71452.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 46/208 (22%), Positives = 80/208 (38%), Gaps = 9/208 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPATL 132
+Q L ++ACNTA L +E++ P+I ++ I +L T AT+
Sbjct: 61 HQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVANKNASILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE E+ + +
Sbjct: 121 QSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-----ELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWL 220
+VI+L CTH+PLI L
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMGHFTLL 202
>gi|197693646|gb|ACH71492.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 46/209 (22%), Positives = 84/209 (40%), Gaps = 11/209 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKVQLFDE-IIYYGDSARVPYGTKDPATIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVANKNASILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWL 220
+VI+L CTH+PLI L
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMGHFALL 202
>gi|138998736|dbj|BAF51428.1| glutamate recemase [Streptococcus mutans]
Length = 141
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 1/142 (0%)
Query: 21 SGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80
SG+GGL V++++ +P IY+ D PYG +K L + +L K + +
Sbjct: 1 SGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKTYTWELVNFLLTK-KVKMI 59
Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNL 140
V ACNTA ++ +E++ +P A T SG I I+ TP T++
Sbjct: 60 VFACNTATAVVWEEVKEKLDIPVLGVILPGSSAAIKSTISGQIGIIGTPMTIKSNIYEQK 119
Query: 141 IHSYVSQCHIHLVSSMILASRV 162
I Q + ++ V
Sbjct: 120 ILVLSPQMKVRSLACPKFVPIV 141
>gi|197693650|gb|ACH71494.1| glutamate racemase [Helicobacter pylori]
gi|197693652|gb|ACH71495.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 47/209 (22%), Positives = 84/209 (40%), Gaps = 11/209 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L V+ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIKLLVVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWL 220
+VI+L CTH+PLI L
Sbjct: 174 PEVIILGCTHFPLIARQIEGYFMGHFALL 202
>gi|197693568|gb|ACH71453.1| glutamate racemase [Helicobacter pylori]
gi|197693714|gb|ACH71526.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats.
Identities = 45/207 (21%), Positives = 81/207 (39%), Gaps = 9/207 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
+Q L ++ACNTA L +E++ P+I ++ I +L T AT+
Sbjct: 61 HQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE + ++ + F +
Sbjct: 121 QSNAYDNALKRQGY-LNVSHLATSLFVPLIEENILEG----ELLETCMRYYFTPLKI-LP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693560|gb|ACH71449.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats.
Identities = 45/207 (21%), Positives = 79/207 (38%), Gaps = 9/207 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
+Q L ++ACNTA L +E++ P+I ++ I +L T AT+
Sbjct: 61 HQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE E+ + +
Sbjct: 121 QSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-----ELLETCMRYYFTLLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|138998741|dbj|BAF51429.1| glutamate recemase [Streptococcus mutans]
gi|138998743|dbj|BAF51430.1| glutamate recemase [Streptococcus mutans]
gi|138998746|dbj|BAF51431.1| glutamate recemase [Streptococcus mutans]
gi|138998748|dbj|BAF51432.1| glutamate recemase [Streptococcus mutans]
gi|138998750|dbj|BAF51433.1| glutamate recemase [Streptococcus mutans]
gi|138998761|dbj|BAF51434.1| glutamate recemase [Streptococcus mutans]
gi|138998763|dbj|BAF51435.1| glutamate recemase [Streptococcus mutans]
Length = 141
Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 1/142 (0%)
Query: 21 SGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80
SG+GGL V++++ +P IY+ D PYG +K L + +L K + +
Sbjct: 1 SGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKTYTWELVNFLLTK-RVKMI 59
Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNL 140
V ACNTA ++ +E++ +P A T SG I I+ TP T++
Sbjct: 60 VFACNTATAVVWEEVKEKLDIPVLGVILPGSSAAIKSTISGQIGIIGTPMTIKSNIYEQK 119
Query: 141 IHSYVSQCHIHLVSSMILASRV 162
I Q + ++ V
Sbjct: 120 ILDLSPQMKVRSLACPKFVPIV 141
>gi|197693698|gb|ACH71518.1| glutamate racemase [Helicobacter pylori]
gi|197693700|gb|ACH71519.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats.
Identities = 46/208 (22%), Positives = 82/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L V+ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIGLLVVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-----ELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI H
Sbjct: 174 PEVVILGCTHFPLIAHQIEGYFMEHFAL 201
>gi|138998767|dbj|BAF51436.1| glutamate recemase [Streptococcus mutans]
Length = 141
Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 1/142 (0%)
Query: 21 SGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80
SG+GGL V++++ +P IY+ D PYG +K L + +L K + +
Sbjct: 1 SGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKTYTWELVNFLLTK-KAKMI 59
Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNL 140
V ACNTA ++ +E++ +P A T SG I I+ TP T++
Sbjct: 60 VFACNTATAVVWEEVKEKLDIPVLGVILPGSSAAIKSTISGQIGIIGTPMTIKSNIYEQK 119
Query: 141 IHSYVSQCHIHLVSSMILASRV 162
I Q + ++ V
Sbjct: 120 ILDLSPQMKVRSLACPKFVPIV 141
>gi|197693548|gb|ACH71443.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 83/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKVQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVANKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIARQIESYFMGHFAL 201
>gi|195536596|dbj|BAG68021.1| glutamate recemase [Streptococcus mutans]
gi|195536598|dbj|BAG68022.1| glutamate recemase [Streptococcus mutans]
gi|195536600|dbj|BAG68023.1| glutamate recemase [Streptococcus mutans]
gi|195536602|dbj|BAG68024.1| glutamate recemase [Streptococcus mutans]
gi|195536604|dbj|BAG68025.1| glutamate recemase [Streptococcus mutans]
gi|195536606|dbj|BAG68026.1| glutamate recemase [Streptococcus mutans]
Length = 141
Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 1/142 (0%)
Query: 21 SGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLS 80
SG+GGL V++++ +P IY+ D PYG +K L + +L K + +
Sbjct: 1 SGVGGLTVVRELMRQLPHEEVIYIGDSARAPYGPRPAKQIKTYTWELVNFLLTK-KVKMI 59
Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNL 140
V ACNTA ++ +E++ +P A T SG I I+ TP T++
Sbjct: 60 VFACNTATAIVWEEVKEKLDIPVLGVILPGSSAAIKSTISGQIGIIGTPMTIKSNIYEQK 119
Query: 141 IHSYVSQCHIHLVSSMILASRV 162
I Q + ++ V
Sbjct: 120 ILDLSPQMKVRSLACPKFVPIV 141
>gi|197693576|gb|ACH71457.1| glutamate racemase [Helicobacter pylori]
gi|197693766|gb|ACH71552.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 47/208 (22%), Positives = 82/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L V+ACNTA L +E++ F P+I ++ I +L T AT
Sbjct: 60 PHQIKLLVVACNTASALALEEMQKHFKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-----ELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIARQIEGYFMGHFAL 201
>gi|197693710|gb|ACH71524.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 46/208 (22%), Positives = 84/208 (40%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVANKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE G + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILGG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693660|gb|ACH71499.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 46/209 (22%), Positives = 85/209 (40%), Gaps = 11/209 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKVQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPAT 131
++ L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVANKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE G + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILGG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWL 220
+VI+L CTH+PLI L
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMEHFALL 202
>gi|197693664|gb|ACH71501.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 46/208 (22%), Positives = 80/208 (38%), Gaps = 9/208 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
+Q L ++ACNTA L +E++ P+I ++ I +L T AT+
Sbjct: 61 HQIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVKDKNASILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + +I +++ + +EE E+ + +
Sbjct: 121 QSNAYDNALKQQGY-LNISHLATSLFVPLIEENILEG-----ELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWL 220
+V++L CTH+PLI L
Sbjct: 175 EVVILGCTHFPLIAQKIESYFMEHFALL 202
>gi|197693716|gb|ACH71527.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 83/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKRQGY-LNVSHLATSLFVPLIEENILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693624|gb|ACH71481.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 46/208 (22%), Positives = 84/208 (40%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ F P+I ++ I +L T AT
Sbjct: 60 PHQIELLIVACNTASALALEEMQKHFKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + +H +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGYLNVVH-LATSLFVPLIEENILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI
Sbjct: 174 PEVVILGCTHFPLIARQIEGYFMEHFAL 201
>gi|197693658|gb|ACH71498.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 46/209 (22%), Positives = 85/209 (40%), Gaps = 11/209 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPAT 131
++ L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVANKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE G + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILGG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWL 220
+VI+L CTH+PLI L
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMEHFALL 202
>gi|197693800|gb|ACH71569.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 46/208 (22%), Positives = 83/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY--TQSGLISILSTPAT 131
+Q L V+ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIGLLVVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVENKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEEGILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIAQKIESYFMGHFAL 201
>gi|30961747|gb|AAP39990.1| glutamate racemase [Helicobacter acinonychis]
Length = 232
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 47/227 (20%), Positives = 92/227 (40%), Gaps = 19/227 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FD+G+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 3 IGVFDTGVGGFSVLKSLLKVQLFDE-IIYYGDSARVPYGTKDSATIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP---AIKQAAAYTQSGLISILSTPAT 131
++ L ++ACNTA L + ++ P AIKQ ++ I +L T AT
Sbjct: 61 HEIELLIVACNTASALALETMQKHSKIPIVGVIEPSILAIKQHVKD-KNTPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSSAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG----ELLETCMRYYFAPLKIF- 173
Query: 192 TDVIVLACTHYPLIVHVFRQ------LSPWPVDWLDNSDSIARRARC 232
+VI+L CTH+PLI + + + D+I +
Sbjct: 174 PEVIILGCTHFPLIAQKIESYFVEHFILSKTPLLIHSGDAIVEYLQQ 220
>gi|197693720|gb|ACH71529.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 81/208 (38%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNASILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-----ELLETCMRYYFTLLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693832|gb|ACH71585.1| glutamate racemase [Helicobacter pylori]
gi|197693834|gb|ACH71586.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats.
Identities = 46/207 (22%), Positives = 80/207 (38%), Gaps = 9/207 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
+Q L ++ACNTA L +E++ P+I ++ I +L T AT+
Sbjct: 61 HQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE E+ + +
Sbjct: 121 QSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-----ELLETCMRYYFTLLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI H
Sbjct: 175 EVIILGCTHFPLIAHQIEGYFMEHFAL 201
>gi|197693676|gb|ACH71507.1| glutamate racemase [Helicobacter pylori]
gi|197693678|gb|ACH71508.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 84/208 (40%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
++ L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI H
Sbjct: 174 PEVVILGCTHFPLIAHQIEGYFMEHFAL 201
>gi|197693686|gb|ACH71512.1| glutamate racemase [Helicobacter pylori]
gi|197693688|gb|ACH71513.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 82/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFNE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
++ L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSSAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-----ELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI H
Sbjct: 174 PEVVILGCTHFPLIAHQIEGYFMEHFAL 201
>gi|197693644|gb|ACH71491.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 46/208 (22%), Positives = 82/208 (39%), Gaps = 9/208 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
+Q L ++ACNTA L +E++ P+I ++ I +L T AT+
Sbjct: 61 HQIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVKDKNASILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE + ++ + F +
Sbjct: 121 QSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG----ELLETCMRYYFTPLKI-LP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWL 220
+VI+L CTH+PLI L
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMGHFALL 202
>gi|197693558|gb|ACH71448.1| glutamate racemase [Helicobacter pylori]
gi|197693586|gb|ACH71462.1| glutamate racemase [Helicobacter pylori]
gi|197693614|gb|ACH71476.1| glutamate racemase [Helicobacter pylori]
gi|197693616|gb|ACH71477.1| glutamate racemase [Helicobacter pylori]
gi|197693620|gb|ACH71479.1| glutamate racemase [Helicobacter pylori]
gi|197693768|gb|ACH71553.1| glutamate racemase [Helicobacter pylori]
gi|197693770|gb|ACH71554.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 47/208 (22%), Positives = 84/208 (40%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L V+ACNTA L +E++ F P+I ++ I +L T AT
Sbjct: 60 PHQIKLLVVACNTASALALEEMQKHFKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIARQIEGYFMGHFAL 201
>gi|197693684|gb|ACH71511.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 82/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
++ L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-----ELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI H
Sbjct: 174 PEVVILGCTHFPLIAHQIEGYFMEHFAL 201
>gi|197693702|gb|ACH71520.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 82/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
++ L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVEDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-----ELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI H
Sbjct: 174 PEVVILGCTHFPLIAHQIEGYFMEHFAL 201
>gi|197693868|gb|ACH71603.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 83/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKEKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693628|gb|ACH71483.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 83/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY--TQSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKNKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + +I +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNISHLATSLFVPLIEENILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI
Sbjct: 174 PEVVILGCTHFPLIAQKIESYFMGHFAL 201
>gi|197693804|gb|ACH71571.1| glutamate racemase [Helicobacter pylori]
gi|197693836|gb|ACH71587.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 46/207 (22%), Positives = 81/207 (39%), Gaps = 9/207 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPATL 132
+Q L ++ACNTA L +E++ P+I ++ I +L T AT+
Sbjct: 61 HQIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVANKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE ++ E ++ I +
Sbjct: 121 QSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEGELLETCMRYYFTPLKILPK---- 175
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
VI+L CTH+PLI
Sbjct: 176 -VIILGCTHFPLIARQIEGYFMEHFAL 201
>gi|197693848|gb|ACH71593.1| glutamate racemase [Helicobacter pylori]
gi|197693850|gb|ACH71594.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 83/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693728|gb|ACH71533.1| glutamate racemase [Helicobacter pylori]
gi|197693866|gb|ACH71602.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 83/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693626|gb|ACH71482.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 83/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVKDKNASILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKRQGY-LNVSHLATSLFVPLIEENILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693674|gb|ACH71506.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 44/207 (21%), Positives = 82/207 (39%), Gaps = 9/207 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
++ L ++ACNTA L +E++ P+I ++ I +L T AT+
Sbjct: 61 HKIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVEDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE + ++ + F +
Sbjct: 121 QSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG----ELLETCMRYYFTPLKI-LP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI H
Sbjct: 175 EVVILGCTHFPLIAHQIEGYFMEHFAL 201
>gi|197693668|gb|ACH71503.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 84/208 (40%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
++ L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI H
Sbjct: 174 PEVVILGCTHFPLIAHXIEGYFMEHFAL 201
>gi|197693610|gb|ACH71474.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 44/207 (21%), Positives = 81/207 (39%), Gaps = 9/207 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
++ L ++ACNTA L +E++ P+I ++ I +L T AT+
Sbjct: 61 HKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE + ++ + F +
Sbjct: 121 QSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG----ELLETCMRYYFTPLKI-LP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693802|gb|ACH71570.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats.
Identities = 47/208 (22%), Positives = 84/208 (40%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE G ++ E ++ I +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILGGELLETCMRYYFTPLKILPK--- 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
VI+L CTH+PLI
Sbjct: 176 --VIILGCTHFPLIARQIEGYFMEHFAL 201
>gi|197693708|gb|ACH71523.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 143 bits (360), Expect = 4e-32, Method: Composition-based stats.
Identities = 46/208 (22%), Positives = 83/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L V+ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIGLLVVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNTPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693734|gb|ACH71536.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 82/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKVQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
++ L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHKIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-----ELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI H
Sbjct: 174 PEVVILGCTHFPLIAHQIEGYFMEHFAL 201
>gi|197693694|gb|ACH71516.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 82/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
++ L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSNAYGNALKQQGY-LNVSHLATSLFVPLIEENILEG-----ELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI H
Sbjct: 174 PEVVILGCTHFPLIAHQIEGYFMEHFAL 201
>gi|197693704|gb|ACH71521.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 83/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKRQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693816|gb|ACH71577.1| glutamate racemase [Helicobacter pylori]
gi|197693818|gb|ACH71578.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 81/208 (38%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-----ELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693864|gb|ACH71601.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 83/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKVQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693682|gb|ACH71510.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 84/208 (40%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
++ L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQIKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI H
Sbjct: 174 PEVVILGCTHFPLIAHQIEGYFMEHFAL 201
>gi|197693712|gb|ACH71525.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 45/207 (21%), Positives = 81/207 (39%), Gaps = 9/207 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY--TQSGLISILSTPATL 132
+Q L ++ACNTA L +E++ P+I ++ I +L T AT+
Sbjct: 61 HQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVENKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE + ++ + F +
Sbjct: 121 QSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-LP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693578|gb|ACH71458.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 47/208 (22%), Positives = 82/208 (39%), Gaps = 9/208 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY--TQSGLISILSTPATL 132
+Q L ++ACNTA L +E++ P+I ++ I +L T AT+
Sbjct: 61 HQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVENKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE ++ E ++ I +
Sbjct: 121 QSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEGELLETCMRYYFAPLKILPK---- 175
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWL 220
VI+L CTH+PLI L
Sbjct: 176 -VIILGCTHFPLIARQIEGYFMGHFALL 202
>gi|197693608|gb|ACH71473.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 83/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY--TQSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVENKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI
Sbjct: 174 PEVVILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693872|gb|ACH71605.1| glutamate racemase [Helicobacter pylori]
gi|197693874|gb|ACH71606.1| glutamate racemase [Helicobacter pylori]
gi|197693876|gb|ACH71607.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 46/208 (22%), Positives = 84/208 (40%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI H
Sbjct: 174 PEVIILGCTHFPLIAHQIEGYFMGHFAL 201
>gi|197693758|gb|ACH71548.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 45/207 (21%), Positives = 81/207 (39%), Gaps = 9/207 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
+Q L ++ACNTA L +E++ P+I ++ I +L T AT+
Sbjct: 61 HQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE + ++ + F +
Sbjct: 121 QSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-LP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMGHFAL 201
>gi|197693594|gb|ACH71466.1| glutamate racemase [Helicobacter pylori]
gi|197693596|gb|ACH71467.1| glutamate racemase [Helicobacter pylori]
gi|197693822|gb|ACH71580.1| glutamate racemase [Helicobacter pylori]
gi|197693824|gb|ACH71581.1| glutamate racemase [Helicobacter pylori]
gi|197693826|gb|ACH71582.1| glutamate racemase [Helicobacter pylori]
gi|197693828|gb|ACH71583.1| glutamate racemase [Helicobacter pylori]
gi|197693830|gb|ACH71584.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 46/208 (22%), Positives = 82/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-----ELLETCMRYYFTLLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI H
Sbjct: 174 PEVIILGCTHFPLIAHQIEGYFMEHFAL 201
>gi|197693648|gb|ACH71493.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 47/208 (22%), Positives = 82/208 (39%), Gaps = 9/208 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
+Q L ++ACNTA L +E++ P+I ++ I +L T AT+
Sbjct: 61 HQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE ++ E ++ I +
Sbjct: 121 QSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEGELLETCMRYYFTPLKILPK---- 175
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWL 220
VI+L CTH+PLI L
Sbjct: 176 -VIILGCTHFPLIAQKIEGYFMGHFALL 202
>gi|197693612|gb|ACH71475.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 83/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNASILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI
Sbjct: 174 PEVVILGCTHFPLIAQKIEGYFMGHFAL 201
>gi|197693654|gb|ACH71496.1| glutamate racemase [Helicobacter pylori]
gi|197693656|gb|ACH71497.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 82/208 (39%), Gaps = 9/208 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
++ L ++ACNTA L +E++ P+I ++ I +L T AT+
Sbjct: 61 HEIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE + ++ + F +
Sbjct: 121 QSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG----ELLEACMRYYFTPLKI-LP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWL 220
+VI+L CTH+PLI L
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFALL 202
>gi|197693706|gb|ACH71522.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 45/207 (21%), Positives = 81/207 (39%), Gaps = 9/207 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
+Q L ++ACNTA L +E++ P+I ++ I +L T AT+
Sbjct: 61 HQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNASILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE + ++ + F +
Sbjct: 121 QSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-LP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693670|gb|ACH71504.1| glutamate racemase [Helicobacter pylori]
gi|197693672|gb|ACH71505.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats.
Identities = 46/208 (22%), Positives = 82/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L V+ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIGLLVVACNTASALALEEMQKHSKIPVVGVIEPSILAIKRQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-----ELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI H
Sbjct: 174 PEVVILGCTHFPLIAHQIEGYFMEHFAL 201
>gi|197693588|gb|ACH71463.1| glutamate racemase [Helicobacter pylori]
gi|197693852|gb|ACH71595.1| glutamate racemase [Helicobacter pylori]
gi|197693854|gb|ACH71596.1| glutamate racemase [Helicobacter pylori]
gi|197693856|gb|ACH71597.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 81/208 (38%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNASILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-----ELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693718|gb|ACH71528.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 44/207 (21%), Positives = 81/207 (39%), Gaps = 9/207 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
+Q L ++ACNTA L +E++ P+I ++ I +L T AT+
Sbjct: 61 HQIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNASILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE + ++ + F +
Sbjct: 121 QSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-LP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI
Sbjct: 175 EVVILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693666|gb|ACH71502.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 9/207 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPATL 132
+Q L ++ACNTA L +E++ P+I ++ I +L T AT+
Sbjct: 61 HQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVANKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE + ++ + F +
Sbjct: 121 QSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-LP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI H
Sbjct: 175 EVIILGCTHFPLIAHQIEGYFMGHFAL 201
>gi|197693820|gb|ACH71579.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 46/208 (22%), Positives = 81/208 (38%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L V+ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIGLLVVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVEDKNASILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-----ELLETCMRYYFTLLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693870|gb|ACH71604.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 82/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY--TQSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVENKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDKALKQQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693580|gb|ACH71459.1| glutamate racemase [Helicobacter pylori]
gi|197693696|gb|ACH71517.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 82/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
++ L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHKIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-----ELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI H
Sbjct: 174 PEVVILGCTHFPLIAHQIEGYFMEHFAL 201
>gi|197693722|gb|ACH71530.1| glutamate racemase [Helicobacter pylori]
gi|197693724|gb|ACH71531.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 45/207 (21%), Positives = 80/207 (38%), Gaps = 9/207 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ + +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALNFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
+Q L ++ACNTA L +E++ P+I ++ I +L T AT+
Sbjct: 61 HQIELLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE E+ + +
Sbjct: 121 QSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-----ELLETCMRYYFTLLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693690|gb|ACH71514.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 82/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKVQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY--TQSGLISILSTPAT 131
++ L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHKIELLIVACNTASALALEEMQKHSKIPVVGVIGPSILAIKQQVKNKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-----ELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI H
Sbjct: 174 PEVVILGCTHFPLIAHQIEGYFMEHFAL 201
>gi|197693640|gb|ACH71489.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 46/208 (22%), Positives = 82/208 (39%), Gaps = 9/208 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
+Q L ++ACNTA L +E++ P+I ++ I +L T AT+
Sbjct: 61 HQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE + ++ + F +
Sbjct: 121 QSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG----ELLETCMHYYFTPLKI-LP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWL 220
+VI+L CTH+PLI L
Sbjct: 175 EVIILGCTHFPLIAXKIEGYFMGHFALL 202
>gi|197693590|gb|ACH71464.1| glutamate racemase [Helicobacter pylori]
gi|197693782|gb|ACH71560.1| glutamate racemase [Helicobacter pylori]
gi|197693784|gb|ACH71561.1| glutamate racemase [Helicobacter pylori]
gi|197693786|gb|ACH71562.1| glutamate racemase [Helicobacter pylori]
gi|197693788|gb|ACH71563.1| glutamate racemase [Helicobacter pylori]
gi|197693790|gb|ACH71564.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats.
Identities = 46/207 (22%), Positives = 81/207 (39%), Gaps = 9/207 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY--TQSGLISILSTPATL 132
+Q L ++ACNTA L +E++ P+I ++ I +L T AT+
Sbjct: 61 HQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVENKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE ++ E ++ I +
Sbjct: 121 QSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEGELLETCMRYYFAPLKILPK---- 175
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
VI+L CTH+PLI
Sbjct: 176 -VIILGCTHFPLIARQIEGYFMGHFAL 201
>gi|197693638|gb|ACH71488.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats.
Identities = 46/208 (22%), Positives = 83/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L V+ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIKLLVVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIARRIEGYFMGHFAL 201
>gi|197693806|gb|ACH71572.1| glutamate racemase [Helicobacter pylori]
gi|197693808|gb|ACH71573.1| glutamate racemase [Helicobacter pylori]
gi|197693810|gb|ACH71574.1| glutamate racemase [Helicobacter pylori]
gi|197693812|gb|ACH71575.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats.
Identities = 45/207 (21%), Positives = 81/207 (39%), Gaps = 9/207 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
+Q L ++ACNTA L +E++ P+I ++ I +L T AT+
Sbjct: 61 HQIELLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE + ++ + F +
Sbjct: 121 QSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-LP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693860|gb|ACH71599.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 83/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKRQVKDKNASILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693630|gb|ACH71484.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (357), Expect = 7e-32, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 81/208 (38%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-----ELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIARQIEGYFMGHFAL 201
>gi|197693550|gb|ACH71444.1| glutamate racemase [Helicobacter pylori]
gi|197693776|gb|ACH71557.1| glutamate racemase [Helicobacter pylori]
gi|197693778|gb|ACH71558.1| glutamate racemase [Helicobacter pylori]
gi|197693780|gb|ACH71559.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (357), Expect = 7e-32, Method: Composition-based stats.
Identities = 46/207 (22%), Positives = 81/207 (39%), Gaps = 9/207 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY--TQSGLISILSTPATL 132
+Q L ++ACNTA L +E++ P+I ++ I +L T AT+
Sbjct: 61 HQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVENKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE ++ E ++ I
Sbjct: 121 QSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEGELLETCMRYYFAPLKILP----- 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIARQIEGYFMGHFAL 201
>gi|197693552|gb|ACH71445.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (357), Expect = 7e-32, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 81/208 (38%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-----ELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI
Sbjct: 174 PEVVILGCTHFPLIAQKIEGYFMGHFAL 201
>gi|197693632|gb|ACH71485.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (357), Expect = 7e-32, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 81/208 (38%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-----ELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMGHFAL 201
>gi|197693606|gb|ACH71472.1| glutamate racemase [Helicobacter pylori]
gi|197693760|gb|ACH71549.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (357), Expect = 7e-32, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 83/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKRQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMGHFAL 201
>gi|197693692|gb|ACH71515.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (357), Expect = 7e-32, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 82/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
++ L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHKIGLLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-----ELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI H
Sbjct: 174 PEVVILGCTHFPLIAHQIEGYFMEHFAL 201
>gi|197693600|gb|ACH71469.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (357), Expect = 7e-32, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 83/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKVQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIELLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693764|gb|ACH71551.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (357), Expect = 8e-32, Method: Composition-based stats.
Identities = 46/208 (22%), Positives = 82/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-----ELLETCMRYYFTLLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI H
Sbjct: 174 PEVIILGCTHFPLIAHQIEGYFMGHFAL 201
>gi|197693592|gb|ACH71465.1| glutamate racemase [Helicobacter pylori]
gi|197693838|gb|ACH71588.1| glutamate racemase [Helicobacter pylori]
gi|197693840|gb|ACH71589.1| glutamate racemase [Helicobacter pylori]
gi|197693842|gb|ACH71590.1| glutamate racemase [Helicobacter pylori]
gi|197693844|gb|ACH71591.1| glutamate racemase [Helicobacter pylori]
gi|197693846|gb|ACH71592.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 142 bits (357), Expect = 8e-32, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 83/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693622|gb|ACH71480.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 141 bits (356), Expect = 8e-32, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 83/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKVQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIELLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693634|gb|ACH71486.1| glutamate racemase [Helicobacter pylori]
gi|197693636|gb|ACH71487.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 141 bits (356), Expect = 8e-32, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 81/208 (38%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-----ELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI
Sbjct: 174 PEVVILGCTHFPLIAQKIEGYFMGHFAL 201
>gi|197693564|gb|ACH71451.1| glutamate racemase [Helicobacter pylori]
gi|197693744|gb|ACH71541.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 141 bits (356), Expect = 8e-32, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 81/208 (38%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVEDKNASILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-----ELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMGHFAL 201
>gi|197693574|gb|ACH71456.1| glutamate racemase [Helicobacter pylori]
gi|197693740|gb|ACH71539.1| glutamate racemase [Helicobacter pylori]
gi|197693742|gb|ACH71540.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 141 bits (356), Expect = 9e-32, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 82/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFGE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI
Sbjct: 174 PEVVILGCTHFPLIAQKIEGYFMGHFAL 201
>gi|197693556|gb|ACH71447.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 141 bits (356), Expect = 9e-32, Method: Composition-based stats.
Identities = 46/208 (22%), Positives = 83/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE ++ E ++ I +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEGELLETCMRYYFTPLKILPK--- 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
VI+L CTH+PLI
Sbjct: 176 --VIILGCTHFPLIARQIEGYFMEHFAL 201
>gi|197693772|gb|ACH71555.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 141 bits (356), Expect = 9e-32, Method: Composition-based stats.
Identities = 46/208 (22%), Positives = 84/208 (40%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ F P+I ++ I +L T AT
Sbjct: 60 PHQIELLIVACNTASALALEEMQKHFKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIARQIEGYFMGHFAL 201
>gi|197693738|gb|ACH71538.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 141 bits (356), Expect = 9e-32, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 83/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKRQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIARKIEGYFMGHFAL 201
>gi|213583010|ref|ZP_03364836.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-0664]
Length = 135
Score = 141 bits (356), Expect = 9e-32, Method: Composition-based stats.
Identities = 56/134 (41%), Positives = 87/134 (64%), Gaps = 1/134 (0%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 2 LVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R Y
Sbjct: 62 LSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKRPY 120
Query: 137 TSNLIHSYVSQCHI 150
T LI + ++C I
Sbjct: 121 THELIARFANECQI 134
>gi|197693762|gb|ACH71550.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 141 bits (356), Expect = 9e-32, Method: Composition-based stats.
Identities = 46/208 (22%), Positives = 82/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-----ELLETCMRYYFTLLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI H
Sbjct: 174 PEVIILGCTHFPLIAHRIEGYFMGHFAL 201
>gi|197693562|gb|ACH71450.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 47/208 (22%), Positives = 83/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L V+ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIGLLVVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE ++ E ++ I +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEGELLETCMRYYFAPLKILPK--- 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
VI+L CTH+PLI
Sbjct: 176 --VIILGCTHFPLIARQIEGYFMGHFAL 201
>gi|197693736|gb|ACH71537.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 84/208 (40%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
Y+ L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PYKIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQIKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI H
Sbjct: 174 PEVVILGCTHFPLIAHQIEGYFMEHFAL 201
>gi|197693642|gb|ACH71490.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 46/209 (22%), Positives = 84/209 (40%), Gaps = 11/209 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWL 220
+VI+L CTH+PLI L
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMGHFALL 202
>gi|197693730|gb|ACH71534.1| glutamate racemase [Helicobacter pylori]
gi|197693732|gb|ACH71535.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 83/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
++ L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHKIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQIKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ + N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSSAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-----ELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI H
Sbjct: 174 PEVVILGCTHFPLIAHQIEGYFMEHFAL 201
>gi|197693554|gb|ACH71446.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 46/208 (22%), Positives = 83/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE ++ E ++ I +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEGELLETCMRYYFTPLKILPK--- 175
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
VI+L CTH+PLI
Sbjct: 176 --VIILGCTHFPLIARQIEGYFMEHFAL 201
>gi|197693572|gb|ACH71455.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 80/208 (38%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFNE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
++ L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE E+ + +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-----ELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIARQIEGYFMGHFAL 201
>gi|197693546|gb|ACH71442.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 45/207 (21%), Positives = 79/207 (38%), Gaps = 9/207 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
+Q L ++ACNTA L +E++ P+I ++ I +L T AT+
Sbjct: 61 HQIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKRQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE E+ + +
Sbjct: 121 QSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-----ELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMGHFAL 201
>gi|197693796|gb|ACH71567.1| glutamate racemase [Helicobacter pylori]
gi|197693798|gb|ACH71568.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 83/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIGLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVKDKNASILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMGHFAL 201
>gi|197693726|gb|ACH71532.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 44/207 (21%), Positives = 78/207 (37%), Gaps = 9/207 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
+Q L ++ACNTA L +E++ P+I ++ I +L T A +
Sbjct: 61 HQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAMI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE E+ + +
Sbjct: 121 QSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-----ELLETCMRYYFTPLEILP 174
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 175 EVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693794|gb|ACH71566.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 83/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMGHFAL 201
>gi|197693598|gb|ACH71468.1| glutamate racemase [Helicobacter pylori]
gi|197693774|gb|ACH71556.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 83/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIARQIEGYFMGHFAL 201
>gi|197693792|gb|ACH71565.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 45/207 (21%), Positives = 81/207 (39%), Gaps = 9/207 (4%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+GG VL+ + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFF-KP 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATL 132
++ L ++ACNTA L +E++ P+I ++ I +L T AT+
Sbjct: 61 HKIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILAIKQQVKDKNAPILVLGTKATI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
+ N + ++ +++ + +EE ++ E ++ I +
Sbjct: 121 QSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEGELLETCMRYYFAPLKILPK---- 175
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDW 219
VI+L CTH+PLI
Sbjct: 176 -VIILGCTHFPLIARQIEGYFMGHFAL 201
>gi|197693584|gb|ACH71461.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 46/208 (22%), Positives = 82/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + S +EE E+ + +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVSLIEENILEG-----ELLETCMRYYFTPLEIL 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMGHFAL 201
>gi|111023014|ref|YP_705986.1| glutamate racemase [Rhodococcus jostii RHA1]
gi|110822544|gb|ABG97828.1| probable glutamate racemase [Rhodococcus jostii RHA1]
Length = 257
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 12/252 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ + DSG+G L +R L P+ I D G P+G + + R++ LD+
Sbjct: 3 VALIDSGLGMLPTSAWLRKLRPDLDLILALDPDGAPWGPKPEQWVIDRVLATAQRCLDR- 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ V+ CNTA D +R P++ +G VPAIK AAA +S +++ +T AT
Sbjct: 62 GAEVIVLPCNTASVTALDHVREFVGPAVPVVGTVPAIKPAAAACES--VAVWATAATTAS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y ++LI + + + V+ LA ++ +E+
Sbjct: 120 RYQADLIEKFGNGSSVVGVACHGLAEAIDRGERDAATAAIASA-------VERTPDDVGG 172
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VL CTHYPL+ P V D+++++A + + +N + +FLSG
Sbjct: 173 VVLGCTHYPLMADEIAAQLPAGVRLFDSAEAVATQTLRRIDALNRP-SAGEGTVEVFLSG 231
Query: 255 KPDIAMRRLMQG 266
+P
Sbjct: 232 RPGRLPASAEAF 243
>gi|197693814|gb|ACH71576.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 83/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDS +GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSSVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE G + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILGG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMEHFAL 201
>gi|197693754|gb|ACH71546.1| glutamate racemase [Helicobacter pylori]
gi|197693756|gb|ACH71547.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 83/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIGLLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVKDKNASILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMGHFAL 201
>gi|227500398|ref|ZP_03930460.1| possible glutamate racemase [Anaerococcus tetradius ATCC 35098]
gi|227217461|gb|EEI82780.1| possible glutamate racemase [Anaerococcus tetradius ATCC 35098]
Length = 250
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 51/217 (23%), Positives = 85/217 (39%), Gaps = 9/217 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSG+GGL VL+++ + + Y D + PYG L + L+K+
Sbjct: 4 IGVFDSGLGGLTVLRELSKTN-KAQYFYFGDTLRVPYGGRSREELIGFACDIVD-FLEKF 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
VIACNT KD L + ++ A+ T G +L T T+
Sbjct: 62 DIDYYVIACNTLSVTAKDFLVDKYKKKFIPITQMGLR--ASETYGGSFLVLGTKTTINSH 119
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ N + ++ ++ L +E + E++ I+ K I
Sbjct: 120 FYKNNLEKI-PGNIVYEKAATKLVDFIE----SGNMASSELETYIDSYISLANEKEIANI 174
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232
+LACTHYP+I + + +D + A R
Sbjct: 175 ILACTHYPIIKSKIENRLTYKANIIDPAIFAADYLRS 211
>gi|72162561|ref|YP_290218.1| glutamate racemase [Thermobifida fusca YX]
gi|71916293|gb|AAZ56195.1| glutamate racemase [Thermobifida fusca YX]
Length = 256
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 63/250 (25%), Positives = 96/250 (38%), Gaps = 11/250 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R + P+ I D P+G + R + +LD+
Sbjct: 3 IALVDSGIGLLSTAAALRRIRPDADLILSMDPDYMPWGPRSVPEIVARALAGARAVLDE- 61
Query: 76 QPVLSVIACNTAFTLIKDELR-STFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
QP V+ACNTA + LR P + +G VPA+K AA + +I +TPAT
Sbjct: 62 QPDAVVVACNTASVHALESLRAELEPRIPVIGTVPAVKPAAD--RGAPFAIWATPATTGS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y +LI + + V+ LA VE + E
Sbjct: 120 PYQRDLIDRFARGIAVTPVACPGLADAVER-------ADPAAVAEAVDHAAAHTPADVSA 172
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VL CTHY L+ V V +D++A +A + ++ SG
Sbjct: 173 VVLGCTHYDLVSDVITAALGEHVTLFTAADAVAAQALRRIGVSPQPDAPRTGGLRVYASG 232
Query: 255 KPDIAMRRLM 264
+P +
Sbjct: 233 RPAQLPEAAL 242
>gi|197693746|gb|ACH71542.1| glutamate racemase [Helicobacter pylori]
gi|197693748|gb|ACH71543.1| glutamate racemase [Helicobacter pylori]
gi|197693750|gb|ACH71544.1| glutamate racemase [Helicobacter pylori]
gi|197693752|gb|ACH71545.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 81/208 (38%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I + I +L T AT
Sbjct: 60 PHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVANKKAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + + +++ + +EE + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LSVSHLATSLFVPLIEESILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMGHFAL 201
>gi|323342863|ref|ZP_08083095.1| glutamate racemase [Erysipelothrix rhusiopathiae ATCC 19414]
gi|322463975|gb|EFY09169.1| glutamate racemase [Erysipelothrix rhusiopathiae ATCC 19414]
Length = 252
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 58/258 (22%), Positives = 94/258 (36%), Gaps = 18/258 (6%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
K ++ IFDSG+GG V Q ++ + + AD PYGN D A+ +
Sbjct: 4 MKKIKTLGIFDSGLGGYSVYQYLKQHLDPVSLVLYADQKNAPYGNQSDDAIIAYTLHAM- 62
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ VIACNT + R+ FP M +G + + I+ST
Sbjct: 63 KWFQDHDIRDVVIACNTVSAVALSTARNHFPDMNLIGIIELTVGQIEPNADTCVGIVSTL 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT N IH H+ ++ L + +E +K+ +E
Sbjct: 123 ATFNAHAYRNFIHEKGP-IHVKELALPELVNIIEGLNQNLKLDT-----YLENELKPILE 176
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
++L CTHYPL+ FR++ V D+ I + +
Sbjct: 177 S--TDLILGCTHYPLVHDAFRKIYKGQVH--DSRRPICEYVA-------MNYEFLRSSCQ 225
Query: 250 LFLSGKPDIAMRRLMQGF 267
F +G R++ + F
Sbjct: 226 TFTTGDAQKMERQIKRLF 243
>gi|213029822|ref|ZP_03344269.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. 404ty]
Length = 208
Score = 139 bits (351), Expect = 4e-31, Method: Composition-based stats.
Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 4/205 (1%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ + +Y L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+
Sbjct: 1 MTAVQQRYPLSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLA 59
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T AT++R YT LI + ++C I ++ S L E G + +E+++ +
Sbjct: 60 TRATVKRPYTHELIARFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMP 119
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
E D +VL CTH+PL+ Q+ P +D+ +IARR LL +
Sbjct: 120 EPP--DTVVLGCTHFPLLRDELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSTDAN 177
Query: 248 HALFLSGKP-DIAMRRLMQGFGLKS 271
A ++ P + ++Q +G ++
Sbjct: 178 IAYCMAMTPGAEQLLPVLQRYGFET 202
>gi|197693680|gb|ACH71509.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 139 bits (351), Expect = 4e-31, Method: Composition-based stats.
Identities = 44/208 (21%), Positives = 84/208 (40%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
++ L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHEIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVEDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +EE + ++ + F +
Sbjct: 120 IQFNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG----ELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+V++L CTH+PLI H
Sbjct: 174 PEVVILGCTHFPLIAHQIEGYFMEHFAL 201
>gi|297567944|ref|YP_003686914.1| Glutamate racemase [Meiothermus silvanus DSM 9946]
gi|296852393|gb|ADH65406.1| Glutamate racemase [Meiothermus silvanus DSM 9946]
Length = 234
Score = 139 bits (351), Expect = 4e-31, Method: Composition-based stats.
Identities = 58/257 (22%), Positives = 105/257 (40%), Gaps = 29/257 (11%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ +FDSG+GGL L+++R L P+ ++Y+AD PYG +++R+ L +
Sbjct: 2 TVGVFDSGVGGLAALEELRRLRPDLDYLYLADTAWAPYGPLPPERIRERV-EQVGGFLLE 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
V+ACNTA L L A+ +QAA + ++ +T AT R
Sbjct: 61 AGAEALVVACNTASAWGAGALEGLRA--PVLEAIGPTRQAA--GREEGTAVWTTAATWRS 116
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + + +LA VEE ++ E + +E T
Sbjct: 117 GVYRGVGEV---------IPTPLLAPLVEEGHLDDRVAEAVVGAYLER-----LPGGTRR 162
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VL CTHY + + +L+P + +D++ + R L ++
Sbjct: 163 LVLGCTHYSFLRPLLSRLAP-GLALVDSALA-----LARTAARRLPPARGRGRLRLLVTS 216
Query: 255 KPDIAMRRLMQGFGLKS 271
+ RR+ GL++
Sbjct: 217 ERGAYSRRV----GLEA 229
>gi|238789626|ref|ZP_04633410.1| Glutamate racemase [Yersinia frederiksenii ATCC 33641]
gi|238722379|gb|EEQ14035.1| Glutamate racemase [Yersinia frederiksenii ATCC 33641]
Length = 212
Score = 138 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 6/209 (2%)
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
+ + + + ++ + VIACNTA T+ LR F + +G VPAIK A T++G++
Sbjct: 2 LEIVTAVQQRHPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVG 60
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+L+T T+ +YT +LI + + C I L+ S L E G + + +KK +
Sbjct: 61 LLATRGTVHASYTLDLIERFATDCKIELLGSSELVELAESKLHGGVVPVEALKKILHPWL 120
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
+ D IVL CTH+PL+ Q+ P +D+ +IARR L+ +
Sbjct: 121 --MMREPPDTIVLGCTHFPLLAEELAQVLPEGTRMVDSGAAIARRTAWLISSQENIISST 178
Query: 245 FDDHALF--LSGKPDIAMRRLMQGFGLKS 271
++ A L+ D + ++QG+G +
Sbjct: 179 DENIAYCMALNADTDALL-PVLQGYGFPT 206
>gi|225010450|ref|ZP_03700921.1| Glutamate racemase [Flavobacteria bacterium MS024-3C]
gi|225005279|gb|EEG43230.1| Glutamate racemase [Flavobacteria bacterium MS024-3C]
Length = 138
Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats.
Identities = 43/133 (32%), Positives = 57/133 (42%), Gaps = 2/133 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I FDSG+GG V + L+P IYVAD PYG + + L
Sbjct: 7 PIGFFDSGVGGTSVWSAVNNLLPNESTIYVADSANAPYGERSAETILALSIKNTD-FLIS 65
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L V+ACNTA T LR + + F+G PAIK AA T +G + +L+T TL
Sbjct: 66 KGCKLIVVACNTATTNAIAVLREKY-IIPFIGIEPAIKPAALQTLTGKVGLLATKGTLGS 124
Query: 135 TYTSNLIHSYVSQ 147
+
Sbjct: 125 ALFHKTVLENAGG 137
>gi|284052422|ref|ZP_06382632.1| glutamate racemase [Arthrospira platensis str. Paraca]
Length = 214
Score = 138 bits (348), Expect = 8e-31, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 67/191 (35%), Gaps = 6/191 (3%)
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS 138
+ ++ACNT+ L + +RS F +P + A +Q I +++TPAT
Sbjct: 1 MVLMACNTSSALALEVVRSEFDIPILGLILPGARAAI--SQGERIGVIATPATAASNAYR 58
Query: 139 NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLA 198
I + V +E+ + ++ +R D ++
Sbjct: 59 QAIQEINPAVQVWQVGCPAFVPLIEQNRIHDPCTLEAARE----YLTPLIQQRIDTLIYG 114
Query: 199 CTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDI 258
CTHYP + V R L P V +D + + L + + +SG +
Sbjct: 115 CTHYPHLAPVLRSLLPAAVKLVDPAVHLVEAVAQELELLGLRHGDLPRPTRFCVSGCAEQ 174
Query: 259 AMRRLMQGFGL 269
+Q G
Sbjct: 175 FANLSVQWLGY 185
>gi|238750876|ref|ZP_04612374.1| Glutamate racemase [Yersinia rohdei ATCC 43380]
gi|238711020|gb|EEQ03240.1| Glutamate racemase [Yersinia rohdei ATCC 43380]
Length = 211
Score = 138 bits (348), Expect = 8e-31, Method: Composition-based stats.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 6/208 (2%)
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI 125
+ + + ++ + VIACNTA T+ LR F + +G VPAIK A T++G++ +
Sbjct: 2 EIVTAVQQRHPLAIVVIACNTASTVSLPALRERF-TFPVVGVVPAIKPAVRLTRNGVVGL 60
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
L+T T+ +YT +LI + + C I L+ S L E G + + +KK +
Sbjct: 61 LATRGTVHASYTLDLIERFATDCKIELLGSSDLVELAETKLHGGTVPTEALKKILHPWL- 119
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+ D IVL CTH+PL+ Q+ P +D+ +IARR L+ +
Sbjct: 120 -MMREPPDTIVLGCTHFPLLAAELAQVLPEGTRMVDSGAAIARRTAWLISSQENVVSSTD 178
Query: 246 DDHALF--LSGKPDIAMRRLMQGFGLKS 271
++ A L+ D + ++QG+G +
Sbjct: 179 ENIAYCMALNADTDALL-PVLQGYGFPT 205
>gi|197693582|gb|ACH71460.1| glutamate racemase [Helicobacter pylori]
gi|197693602|gb|ACH71470.1| glutamate racemase [Helicobacter pylori]
gi|197693604|gb|ACH71471.1| glutamate racemase [Helicobacter pylori]
gi|197693618|gb|ACH71478.1| glutamate racemase [Helicobacter pylori]
Length = 203
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 43/208 (20%), Positives = 83/208 (39%), Gaps = 11/208 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-TIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNT L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIELLIVACNTVSALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNASILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
++ N + ++ +++ + +E ++ + ++ + F +
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIE----ESILESELLETCMRYYFTPLKI-L 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+VI+L CTH+PLI
Sbjct: 174 PEVIILGCTHFPLIAQKIEGYFMGHFAL 201
>gi|167044446|gb|ABZ09122.1| putative Asp/Glu/hydantoin racemase [uncultured marine
crenarchaeote HF4000_APKG6D9]
Length = 253
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 47/259 (18%), Positives = 102/259 (39%), Gaps = 17/259 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FDSG+G L ++++++ + IY AD +PYG L + + +
Sbjct: 3 KIAVFDSGLGSLSIIKEIQKITKSE-IIYFADQKNYPYGRKSQAQLSIIIQKTVKLLEKE 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ P + V+A NT ++ + + P +K A T++ I IL+T + +
Sbjct: 62 FAPEIIVVASNTPSLML------DLSTQKIVDVKPPLKIAKKITKTKQIGILATKSAINS 115
Query: 135 TYTSNLIHSYVS--QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
S I I ++ L VE + ++ I+ +
Sbjct: 116 KGLSEYIRKNNFSKSFKIFKINGSNLIDLVESGKF--LTDKKYCREIIKKDLEILSQQSI 173
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
D I L+ TH + + ++ P + ++D+ +A++ + ++ + +
Sbjct: 174 DTITLSSTHLIFLKSLLKKEFPK-IKFIDSGKIVAQKIFLKIK----NKESKRNSLKILT 228
Query: 253 SGKPDIAMRRLMQGFGLKS 271
SG + +L + G+ +
Sbjct: 229 SGNVNDFQIKLNK-LGITN 246
>gi|223984567|ref|ZP_03634697.1| hypothetical protein HOLDEFILI_01992 [Holdemania filiformis DSM
12042]
gi|223963472|gb|EEF67854.1| hypothetical protein HOLDEFILI_01992 [Holdemania filiformis DSM
12042]
Length = 244
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 61/249 (24%), Positives = 103/249 (41%), Gaps = 22/249 (8%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I +FDSGIGGL +L K+R P+ F+Y+AD PYG+ + L+ L + L+K
Sbjct: 2 IGVFDSGIGGLRLLDKLRQRWPQEDFVYLADQAHVPYGSLDRDT-LLDLLQLNLNWLEKQ 60
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
V+ACNTA R + + + + + I +L+TP T +
Sbjct: 61 GADRIVVACNTASATG--IARRYRGQAQIVEIISKTCEQIPAS-TEKILVLATPFTAQSH 117
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
++ + Q + V LA +E + EI+ ++G D+
Sbjct: 118 RYQQVLARQLPQAEVKEVGLSCLAFMIEHLC-----PKQEIETYLKGELNAYRN-GFDLA 171
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
VLACTH+P F ++ + +D+ +SIA A + +G
Sbjct: 172 VLACTHFPFARDQFAKVLG--IPLIDS-ESIALEA---------PAQPGQGTLRIATTGS 219
Query: 256 PDIAMRRLM 264
++ R+L
Sbjct: 220 VELLTRQLR 228
>gi|119952902|ref|YP_945111.1| glutamate racemase [Borrelia turicatae 91E135]
gi|119861673|gb|AAX17441.1| glutamate racemase [Borrelia turicatae 91E135]
Length = 254
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 60/262 (22%), Positives = 109/262 (41%), Gaps = 14/262 (5%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
L+N I+IFDSG+GGL + + + +++YVAD+ FPYG L K ++ L
Sbjct: 1 MSNLKNVIVIFDSGVGGLSYFEYISKRFVKRNYVYVADNKNFPYGEKSSDFLLKEILELI 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ Y VIACNTA + D+L +FP + L +V +++ A + +++T
Sbjct: 61 LKLEQMYNVAAIVIACNTASISVYDKLNFSFPVIYTLPSVCLVEELA----YKRVILVAT 116
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+ + + L + L + VE +++ K + +E +
Sbjct: 117 HATINSKFIQRE---KDCHWDLILKPASELVNFVEYGDR----FKEDALKYLNFLKLEVK 169
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
R D++ L CTHY I + + +N + + L I + F +
Sbjct: 170 ASRRDMVFLGCTHYLHIKDMIENFLG--IPVYENRELVTNELIKELKSIE-SRDDCFTRY 226
Query: 249 ALFLSGKPDIAMRRLMQGFGLK 270
+ + + +GL
Sbjct: 227 FYLTQDENLYFYKNFCKKYGLH 248
>gi|332296003|ref|YP_004437926.1| glutamate racemase [Thermodesulfobium narugense DSM 14796]
gi|332179106|gb|AEE14795.1| glutamate racemase [Thermodesulfobium narugense DSM 14796]
Length = 277
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 53/256 (20%), Positives = 100/256 (39%), Gaps = 17/256 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLM-PEY-HFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I IFDSG+GG+ +L + P YVAD + PYGN + L + ++ L
Sbjct: 2 KIGIFDSGLGGVNILNSIINSNSPLIGDIFYVADTINVPYGNKDIEEL-ELIVGNIISFL 60
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
+ L + ACNT+ + + ++L+ P I + IL+T T+
Sbjct: 61 ENKGCELIISACNTSSSTVLNKLKQKTKIPIIGTIEPTINFVKETFHHKNLIILATKVTI 120
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF-IEKEGKR 191
N + +++ V+ L +E EI+ + I+
Sbjct: 121 ESKIFENALS--ACDYNVYPVACPKLVDAIEF-----MNPSLEIEDLLNRYLQIDINASE 173
Query: 192 TDVIVLACTHYPLIVHVFRQL----SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
I+L CTHYPLI +++ + LD + I+ A L+ + +
Sbjct: 174 PIGILLGCTHYPLIKSQIKEVASKRFSNEIIILDPCERISSEALNLISKDSLINKSKR-- 231
Query: 248 HALFLSGKPDIAMRRL 263
++ + ++ +++
Sbjct: 232 VYIYDTFDIELIKKKI 247
>gi|238799428|ref|ZP_04642856.1| Glutamate racemase [Yersinia mollaretii ATCC 43969]
gi|238716722|gb|EEQ08610.1| Glutamate racemase [Yersinia mollaretii ATCC 43969]
Length = 211
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 60/206 (29%), Positives = 103/206 (50%), Gaps = 4/206 (1%)
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL 126
+ + + ++ + VIACNTA T+ LR F + +G VPAIK A T++G++ +L
Sbjct: 3 IVTAVQQRHPLAIVVIACNTASTVSLPALRERF-AFPVVGVVPAIKPAVRLTRNGVVGLL 61
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T T+ +YT +LI + + C I L+ S L E G + + +KK +
Sbjct: 62 ATRGTVHASYTLDLIARFATDCKIELLGSSELVELAETKLHGGVVPVEALKKILHPWLAM 121
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+E D IVL CTH+PL+ Q+ P +D+ +IARR L+ + +
Sbjct: 122 REPP--DTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLISSQENVVSSQDE 179
Query: 247 DHALFLSGKPDI-AMRRLMQGFGLKS 271
+ A ++ D A+ ++QG+G +
Sbjct: 180 NMAYCMALNVDTDALLPVLQGYGFPT 205
>gi|229135328|ref|ZP_04264122.1| Glutamate racemase [Bacillus cereus BDRD-ST196]
gi|228648151|gb|EEL04192.1| Glutamate racemase [Bacillus cereus BDRD-ST196]
Length = 185
Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 29/175 (16%), Positives = 61/175 (34%), Gaps = 5/175 (2%)
Query: 95 LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVS 154
++ P P + A T + + I+ T T++ + S ++ + ++
Sbjct: 1 MQKQLPIPVVGVIHPGSRTALKVTNTYHVGIIGTIGTVKSGAYEEALKSINNRVMVESLA 60
Query: 155 SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214
VE + + + + + D ++L CTHYP++ V +++
Sbjct: 61 CPPFVELVE----SGNFESEMAYEVVRETLQPLKSTDIDTLILGCTHYPILGPVIKKVMG 116
Query: 215 WPVDWLDNSDSIARRARCLLPRINTHQTRVF-DDHALFLSGKPDIAMRRLMQGFG 268
V + + D AR +L DH +GK + + FG
Sbjct: 117 DQVQLISSGDETAREVSTILYHSKMLNEGEEQSDHLFLTTGKIGLFKEIASKWFG 171
>gi|225549352|ref|ZP_03770325.1| glutamate racemase [Borrelia burgdorferi 94a]
gi|225370210|gb|EEG99650.1| glutamate racemase [Borrelia burgdorferi 94a]
Length = 305
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 51/214 (23%), Positives = 92/214 (42%), Gaps = 11/214 (5%)
Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63
D Y K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L +
Sbjct: 40 DYYFVMKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEA 99
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++FL + Y V+ACNT + ++L FP + L V ++ +
Sbjct: 100 VLFLIEKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRV 155
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+++T TL + + ++ + + + ++ L + VE K + +E
Sbjct: 156 LLIATNTTLESKFVKDQVNIHND---LIVKAAGELVNFVEYGENYKKYAL----RCLEAL 208
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPV 217
E +++ L CTHY + + PV
Sbjct: 209 KFEVVNTGREIVFLGCTHYLHLKAMIEDFLKIPV 242
>gi|226365519|ref|YP_002783302.1| glutamate racemase [Rhodococcus opacus B4]
gi|226244009|dbj|BAH54357.1| glutamate racemase [Rhodococcus opacus B4]
Length = 257
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 63/252 (25%), Positives = 101/252 (40%), Gaps = 12/252 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ + DSG+G L +R L PE I D G P+G + + R++ +D+
Sbjct: 3 VALIDSGLGMLPTAAWLRKLRPELDLILALDPDGAPWGPKPEQWVIDRVLATAQRSVDR- 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ V+ CNTA D +R P + +G VPAIK AAA S + AT
Sbjct: 62 GAEVIVLPCNTASVTALDHVREFVGPQVPVVGTVPAIKPAAAAFASVAVWAT--AATTAS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y ++LI + + + V+ LA ++ E E+
Sbjct: 120 RYQADLIEKFGNGSSVVGVACHGLAEAIDRGER-------EAAAAAIASAAERTPGDVGA 172
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VL CTHYPL+ P V D+++++A + + +N T +FLSG
Sbjct: 173 VVLGCTHYPLMADEIAARLPAGVRLFDSAEAVAAQTLRRIDALNRPSTG-EGTVEVFLSG 231
Query: 255 KPDIAMRRLMQG 266
+P
Sbjct: 232 RPGRLPASAEAF 243
>gi|213855738|ref|ZP_03383978.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. M223]
Length = 118
Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 50/118 (42%), Positives = 78/118 (66%), Gaps = 1/118 (0%)
Query: 17 LIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQ 76
L+FDSG+GGL V ++R L+P+ H+IY D+V FPYG + + +R++ + + + +Y
Sbjct: 2 LVFDSGVGGLSVYDEIRRLLPDLHYIYAFDNVAFPYGEKSETFIVERVVEIVTAVQQRYP 61
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
L+VIACNTA T+ LR F + +G VPAIK AA T +G++ +L+T AT++R
Sbjct: 62 LSLAVIACNTASTVSLPALREKF-AFPVVGVVPAIKPAARLTANGVVGLLATRATVKR 118
>gi|221217513|ref|ZP_03588984.1| glutamate racemase [Borrelia burgdorferi 72a]
gi|221192791|gb|EEE19007.1| glutamate racemase [Borrelia burgdorferi 72a]
Length = 305
Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats.
Identities = 50/214 (23%), Positives = 93/214 (43%), Gaps = 11/214 (5%)
Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63
D Y K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L +
Sbjct: 40 DYYFVMKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEA 99
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++FL + Y V+ACNT + ++L FP + L V ++ +
Sbjct: 100 VLFLIEKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRV 155
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+++T TL + + ++ + + + ++ L + VE + + + +E
Sbjct: 156 LLIATNTTLESKFVKDQVNIHND---LIVKAAGELVNFVEYGE----NYKKDALRCLEAL 208
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPV 217
E +++ L CTHY + + PV
Sbjct: 209 KFEVVNTGREIVFLGCTHYLHLKVMIEDFLKIPV 242
>gi|216264433|ref|ZP_03436425.1| glutamate racemase [Borrelia burgdorferi 156a]
gi|223889211|ref|ZP_03623800.1| glutamate racemase [Borrelia burgdorferi 64b]
gi|225549776|ref|ZP_03770741.1| glutamate racemase [Borrelia burgdorferi 118a]
gi|215980906|gb|EEC21713.1| glutamate racemase [Borrelia burgdorferi 156a]
gi|223885460|gb|EEF56561.1| glutamate racemase [Borrelia burgdorferi 64b]
gi|225369736|gb|EEG99184.1| glutamate racemase [Borrelia burgdorferi 118a]
Length = 305
Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats.
Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 11/214 (5%)
Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63
D Y + + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L +
Sbjct: 40 DYYFVMENFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEA 99
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++FL + Y V+ACNT + ++L FP + L V ++ +
Sbjct: 100 VLFLIEKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRV 155
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+++T TL + + ++ + + + ++ L + VE K + +E
Sbjct: 156 LLIATNTTLESKFVKDQVNIHND---LIVKAAGELVNFVEYGENYKKYAL----RCLEAL 208
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPV 217
E +++ L CTHY + + PV
Sbjct: 209 KFEVVNTGREIVFLGCTHYLHLKAMIEDFLKIPV 242
>gi|226320707|ref|ZP_03796265.1| glutamate racemase [Borrelia burgdorferi 29805]
gi|226233923|gb|EEH32646.1| glutamate racemase [Borrelia burgdorferi 29805]
Length = 305
Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats.
Identities = 50/214 (23%), Positives = 93/214 (43%), Gaps = 11/214 (5%)
Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63
D Y K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L +
Sbjct: 40 DYYFVMKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEA 99
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++FL + Y V+ACNT + ++L FP + L V ++ +
Sbjct: 100 VLFLIEKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRV 155
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+++T TL + + ++ + + + ++ L + VE + + + +E
Sbjct: 156 LLIATNTTLESKFVKDQVNIHND---LIVKAAGELVNFVEYGE----NYKKDALRCLEAL 208
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPV 217
E +++ L CTHY + + PV
Sbjct: 209 KFEVVNTGREIVFLGCTHYLHLKVMIEDFLKIPV 242
>gi|218249889|ref|YP_002374628.1| glutamate racemase [Borrelia burgdorferi ZS7]
gi|226321989|ref|ZP_03797514.1| glutamate racemase [Borrelia burgdorferi Bol26]
gi|218165077|gb|ACK75138.1| glutamate racemase [Borrelia burgdorferi ZS7]
gi|226232579|gb|EEH31333.1| glutamate racemase [Borrelia burgdorferi Bol26]
Length = 305
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 51/214 (23%), Positives = 92/214 (42%), Gaps = 11/214 (5%)
Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63
D Y K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L +
Sbjct: 40 DYYFVMKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEA 99
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++FL + Y V+ACNT + ++L FP + L V ++ +
Sbjct: 100 VLFLIEKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRV 155
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+++T TL + + ++ + + + ++ L + VE K + +E
Sbjct: 156 LLIATNTTLESKFVKDQVNIHND---LIVKAAGELVNFVEYGENYKKYAL----RCLEAL 208
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPV 217
E +++ L CTHY + + PV
Sbjct: 209 KFEVVNTGREIVFLGCTHYLHLKVMIEDFLKIPV 242
>gi|295395118|ref|ZP_06805327.1| glutamate racemase [Brevibacterium mcbrellneri ATCC 49030]
gi|294972066|gb|EFG47932.1| glutamate racemase [Brevibacterium mcbrellneri ATCC 49030]
Length = 310
Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats.
Identities = 54/225 (24%), Positives = 88/225 (39%), Gaps = 11/225 (4%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
++ + DSG+G + + +P + D PYG +++R + L
Sbjct: 25 PTVGLLDSGLGLVPFAVAVHHELPHANLALAMDPDFAPYGALTSAQIEQRALASA-RTLV 83
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
VIACNTA +R F P + +G VPA+K AAA ++ +T AT
Sbjct: 84 DAGARALVIACNTASVHALSAVRERFEPLVPVIGTVPAVKPAAAT--GAPFAVWATTATT 141
Query: 133 RRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT 192
Y +LI Y +++ V+ LA ++ + E + +
Sbjct: 142 GSAYQRSLISMYAGDINVYPVACAGLAQAIDS-------ADPETIDIALSAAVTATPREA 194
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237
IVL CTHY L+ PV D+ ++AR+ L
Sbjct: 195 QSIVLGCTHYGLVADRIEAAFDRPVTLFDSPQAVARQLARRLAAQ 239
>gi|224532535|ref|ZP_03673159.1| glutamate racemase [Borrelia burgdorferi WI91-23]
gi|224512525|gb|EEF82902.1| glutamate racemase [Borrelia burgdorferi WI91-23]
Length = 305
Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats.
Identities = 49/214 (22%), Positives = 93/214 (43%), Gaps = 11/214 (5%)
Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63
D Y + + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L +
Sbjct: 40 DYYFVMENFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEA 99
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++FL + Y V+ACNT + ++L FP + L V ++ +
Sbjct: 100 VLFLIEKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRV 155
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+++T TL + + ++ + + + ++ L + VE + + + +E
Sbjct: 156 LLIATNTTLESKFVKDQVNIHND---LIVKAAGELVNFVEYGE----NYKKDALRCLEAL 208
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPV 217
E +++ L CTHY + + PV
Sbjct: 209 KFEVVNTGREIVFLGCTHYLHLKVMIEDFLKIPV 242
>gi|7415851|dbj|BAA93558.1| glutamate racemase [Escherichia coli O157:H7]
Length = 209
Score = 131 bits (330), Expect = 9e-29, Method: Composition-based stats.
Identities = 60/199 (30%), Positives = 100/199 (50%), Gaps = 4/199 (2%)
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++
Sbjct: 6 RYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVK 64
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
R+YT LI + ++C I ++ S + E G + D +K+ + KE D
Sbjct: 65 RSYTHELIARFANECQIEMLGSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPP--D 122
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
+VL CTH+PL+ Q+ P +D+ +IARR LL + A ++
Sbjct: 123 TVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMA 182
Query: 254 GKPD-IAMRRLMQGFGLKS 271
P+ + ++Q +G ++
Sbjct: 183 MTPEAEQLLPVLQRYGFET 201
>gi|212637364|ref|YP_002313889.1| glutamate racemase [Shewanella piezotolerans WP3]
gi|212558848|gb|ACJ31302.1| Glutamate racemase [Shewanella piezotolerans WP3]
Length = 273
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 52/230 (22%), Positives = 100/230 (43%), Gaps = 7/230 (3%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+Q +I IFD+GIG + +K+R P+ +Y+AD FPYG+ L + + +
Sbjct: 1 MQKAIAIFDAGIGSYSITEKLRKAFPKADLVYLADRASFPYGHKTQPELLSLIYSAMNFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
D Y P L V+A N + +++R + +G P +K+A + S L+ +L +
Sbjct: 61 QDNYSPQLIVLASNVPSVTVLEQVRELI-DVPIIGVYPPVKKALDISTSSLVGVLGVKSL 119
Query: 132 LRRTYTSNLIHSY-VSQCHIHLVSSMILASRVEEYA--CGIKIKEDEIKKEIEGCFIEKE 188
+ + I + + + L VE + ++ +K+ I+ ++
Sbjct: 120 VCSEQMTRYIENNVIKGQQAKSFDASELVHLVESGEFLFNQEKTKETVKRYIDTLLVQY- 178
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
D L+ TH P + F L P +++LD +D + R ++
Sbjct: 179 -PTMDTFTLSSTHLPWLWDYFTTLYP-TLNFLDPADDVVAGIRSVVDGSG 226
>gi|229490649|ref|ZP_04384487.1| glutamate racemase [Rhodococcus erythropolis SK121]
gi|229322469|gb|EEN88252.1| glutamate racemase [Rhodococcus erythropolis SK121]
Length = 254
Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 59/242 (24%), Positives = 101/242 (41%), Gaps = 12/242 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ + DSG+G L +R L P+ + D G P+G + + R++ LD+
Sbjct: 3 VALIDSGLGLLPTSAWLRRLRPDLDLVLSLDPDGAPWGPKPEPWVVDRVLGAVRRSLDR- 61
Query: 76 QPVLSVIACNTAFTLIKDELRS-TFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ V+ CNTA +R P + +G VPAIK AAA ++I +T AT
Sbjct: 62 GAQVIVLPCNTASVTALPHVRELVGPGVPVIGTVPAIKPAAAA--CDSVAIWATAATTAS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y ++LI + + + V LA ++ + E +
Sbjct: 120 RYQADLIEQFGNGAKVVGVPCHGLADSIDLGDRAAALAAIESAVARTP-------DDVNG 172
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VL CTHYPL+ P V D+++++AR+ + + +F+SG
Sbjct: 173 VVLGCTHYPLLADEIAARLPAGVTLFDSAEAVARQTLRRIDGLGD-AGEGSGTVEVFVSG 231
Query: 255 KP 256
+P
Sbjct: 232 RP 233
>gi|224534028|ref|ZP_03674612.1| glutamate racemase [Borrelia burgdorferi CA-11.2a]
gi|224512864|gb|EEF83231.1| glutamate racemase [Borrelia burgdorferi CA-11.2a]
Length = 305
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 50/214 (23%), Positives = 93/214 (43%), Gaps = 11/214 (5%)
Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63
D Y K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L +
Sbjct: 40 DYYFVMKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPKYLLEA 99
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++FL + Y V+ACNT + ++L FP + L V ++ +
Sbjct: 100 VLFLIEKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRV 155
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+++T TL + + ++ + + + ++ L + VE + + + +E
Sbjct: 156 LLIATNTTLESKFVKDQVNIHND---LIVKAAGELVNFVEYGE----NYKKDALRCLEAL 208
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPV 217
E +++ L CTHY + + PV
Sbjct: 209 KFEVVNTGREIVFLGCTHYLHLKVMIEDFLKIPV 242
>gi|227873305|ref|ZP_03991570.1| possible glutamate racemase [Oribacterium sinus F0268]
gi|227840872|gb|EEJ51237.1| possible glutamate racemase [Oribacterium sinus F0268]
Length = 121
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+I IFDSG+GGL VL+K++ +P FI+ D PYG + ++ +
Sbjct: 1 MDKDKAIGIFDSGLGGLSVLRKLKQELPGEDFIFYGDQKHAPYGEKSEEEVRSLSLS-AY 59
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
L + +VIACNTA + LR FP +G PA+K A
Sbjct: 60 RFLQEKGVKATVIACNTATSAAAPYLRELFPEDIIIGMEPAVKPAVEA 107
>gi|226305260|ref|YP_002765218.1| glutamate racemase [Rhodococcus erythropolis PR4]
gi|226184375|dbj|BAH32479.1| glutamate racemase [Rhodococcus erythropolis PR4]
Length = 254
Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats.
Identities = 58/242 (23%), Positives = 101/242 (41%), Gaps = 12/242 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ + DSG+G L +R L P+ + D G P+G + + R++ LD+
Sbjct: 3 VALIDSGLGLLPTSAWLRRLRPDLDLVLSLDPDGAPWGPKPEPWVVDRVLGAVRRSLDR- 61
Query: 76 QPVLSVIACNTAFTLIKDELRS-TFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ V+ CNTA +R P + +G VPAIK AAA ++I +T AT
Sbjct: 62 GAQVIVLPCNTASVTALPHVRELVGPEVPVIGTVPAIKPAAAA--CDSVAIWATAATTAS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y ++LI + + + V LA ++ + + +
Sbjct: 120 RYQADLIEQFGNGAKVVGVPCHGLADSIDLGDRAAALAA-------IDSAVARTPDDVSG 172
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VL CTHYPL+ P V D+++++AR+ + + +F+SG
Sbjct: 173 VVLGCTHYPLLADEIAARLPAGVTLFDSAEAVARQTLRRIDGLG-AAGEGSGTVEVFVSG 231
Query: 255 KP 256
+P
Sbjct: 232 RP 233
>gi|298254110|ref|ZP_06977696.1| glutamate racemase [Streptococcus pneumoniae str. Canada MDR_19A]
Length = 88
Score = 128 bits (323), Expect = 6e-28, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I DSG+GGL V++++ +P +Y+ D PYG +++ L + +L
Sbjct: 3 NRPIGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIREYTWQLVNFLL 62
Query: 73 DKYQPVLSVIACNTAFTLIKDELRST 98
K + VIACNTA ++ +E+++
Sbjct: 63 TK-DVKMIVIACNTATAVVWEEIKAQ 87
>gi|219684903|ref|ZP_03539845.1| glutamate racemase [Borrelia garinii PBr]
gi|219671848|gb|EED28903.1| glutamate racemase [Borrelia garinii PBr]
Length = 304
Score = 128 bits (322), Expect = 8e-28, Method: Composition-based stats.
Identities = 51/256 (19%), Positives = 104/256 (40%), Gaps = 17/256 (6%)
Query: 4 DNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63
D Y K + I++FDSGIGGL + ++ + Y ++YVAD+ FPYG L +
Sbjct: 40 DYYFVMKNFKEVIIVFDSGIGGLSYFKYIKNKIDRYQYVYVADNKNFPYGEKSSEYLLEA 99
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
+++L + Y ++ACNT + ++L FP + L V I A +
Sbjct: 100 ILYLIEKLNKIYNISALILACNTISVSVYNKLNFVFPVVYTLPEVSLISDLAL----KRV 155
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+++T TL + + ++ + + + ++ L + VE + + +E
Sbjct: 156 LLIATNTTLESKFVKDQVNMHDD---LIVKAAGELVNFVEYGEK----YRKDALRCLEAL 208
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
E +++ L CTHY + + + +N + + + + +
Sbjct: 209 KFEVVNTDREIVFLGCTHYLHLKAMIEDFL--KIPVYENRELVVQSLIRSINFPQCKNSY 266
Query: 244 VFDDH----ALFLSGK 255
+D +L+
Sbjct: 267 YKNDVDLVDEFYLTKN 282
>gi|302562067|ref|ZP_07314409.1| glutamate racemase [Streptomyces griseoflavus Tu4000]
gi|302479685|gb|EFL42778.1| glutamate racemase [Streptomyces griseoflavus Tu4000]
Length = 264
Score = 128 bits (322), Expect = 8e-28, Method: Composition-based stats.
Identities = 64/245 (26%), Positives = 96/245 (39%), Gaps = 15/245 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I + DSGIG L +R L P+ + D G P+G L +R ++
Sbjct: 2 KIALMDSGIGLLAATAAVRRLRPDADLVLSLDPDGMPWGPRTPQDLTER-ALAVAEAAAA 60
Query: 75 YQPVLSVIACNTAFTLIKDELRST-FPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++P ++ CNTA LR+ P + +G VPAIK AAA G ++I +TPAT
Sbjct: 61 HRPDALIVGCNTATVHALTALRARLEPGLPVIGTVPAIKPAAA--GGGPLAIWATPATTG 118
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
Y +LI + + V LA VE ++ E
Sbjct: 119 SPYQRDLIEDFAGGVAVTQVPCWGLAEAVER-------ADETAIDAAVAAAAELTPDEVT 171
Query: 194 VIVLACTHYPLIVHVFRQLSP----WPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+VL CTHY L+ R P+ ++ ++A +A L Q
Sbjct: 172 TVVLGCTHYELVGERIRAAVQRPGRPPLALHGSAGAVAAQALRRLGGRPAPQAPPSGTLT 231
Query: 250 LFLSG 254
+ LSG
Sbjct: 232 VLLSG 236
>gi|329941791|ref|ZP_08291056.1| glutamate racemase [Streptomyces griseoaurantiacus M045]
gi|329299508|gb|EGG43408.1| glutamate racemase [Streptomyces griseoaurantiacus M045]
Length = 261
Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 61/245 (24%), Positives = 95/245 (38%), Gaps = 15/245 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I + DSGIG L +R L P+ + +D G P+G L R ++
Sbjct: 2 KIALMDSGIGLLPAAAAVRRLRPDADLVLSSDPEGMPWGPRTPEDLTVR-ALAVAEAAAA 60
Query: 75 YQPVLSVIACNTAFTLIKDELRST-FPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++P ++ACNTA LR+ P + +G VPAIK AAA G +I +TPAT
Sbjct: 61 HRPDALIVACNTASVHTLPTLRARLEPGLPVIGTVPAIKPAAA--GGGPFAIWATPATTG 118
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
Y LI + + + V+ LA V+
Sbjct: 119 SPYQRGLIEEFAAGLDVAEVACPGLAEAVQHADEAAIDAAIADAAARTP-------GDVT 171
Query: 194 VIVLACTHYPLIVHVFRQLS--PWPVDWL--DNSDSIARRARCLLPRINTHQTRVFDDHA 249
+VL CTHY L+ R P + ++ ++A +A + + +
Sbjct: 172 TVVLGCTHYELVAERIRAALRGPGRSPLVLHGSATAVAAQALRRIGALPDPEATTRGTLT 231
Query: 250 LFLSG 254
+ LSG
Sbjct: 232 VLLSG 236
>gi|21219535|ref|NP_625314.1| glutamate racemase [Streptomyces coelicolor A3(2)]
gi|11071227|emb|CAC14386.1| putative glutamate racemase [Streptomyces coelicolor A3(2)]
Length = 280
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 62/245 (25%), Positives = 93/245 (37%), Gaps = 15/245 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I + DSGIG L +R L P+ I D G P+G L R + ++
Sbjct: 21 KIALMDSGIGLLAATAAVRRLRPDADLILSLDPDGMPWGPRTPKDLTGRALG-VAEAAAA 79
Query: 75 YQPVLSVIACNTAFTLIKDELRST-FPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++P ++ CNTA LR+ P + +G VPAIK AAA G ++I +TPAT
Sbjct: 80 HRPDALIVGCNTATVHALPALRARLEPDVPVIGTVPAIKPAAA--GGGPVAIWATPATTG 137
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
Y LI + + V LA VE ++ E
Sbjct: 138 SPYQRGLIEDFAGDTEVTEVPCPGLADAVEH-------ADETAITEAVAAAAALTPDDVT 190
Query: 194 VIVLACTHYPLIVHVFRQLS----PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+VL CTHY L+ R + ++ ++A +A +
Sbjct: 191 TVVLGCTHYELVAERIRAAVQRPGAPRLVLHGSAGAVAAQALRRIGARPDPGAPATGTLT 250
Query: 250 LFLSG 254
+ LSG
Sbjct: 251 VLLSG 255
>gi|167949668|ref|ZP_02536742.1| glutamate racemase [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 275
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 40/199 (20%), Positives = 75/199 (37%), Gaps = 6/199 (3%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
H + +R + + L VIACNTA LR ++ +G P +K
Sbjct: 2 PKAPHFVAQRAQQI-TRFLIAQGAKTIVIACNTATAAAVASLRQQH-TLPIIGMEPGLKP 59
Query: 114 AAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE 173
A +++G++ IL+T TL +L+ + + + +VE
Sbjct: 60 GIAASRNGVVGILATEGTLGSAKFRDLLRRHGEGARVIIRPCHGWVRQVESTDLSGPRAL 119
Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+ +EI+ + D +VL CTH+P + RQ+ P +D ++A+ +
Sbjct: 120 KVVAEEIQ----PLIDQGVDSLVLGCTHFPFLHQAIRQMVPAKTHIIDTGPAVAKELKRR 175
Query: 234 LPRINTHQTRVFDDHALFL 252
L + +
Sbjct: 176 LVEQGLLRRSTLRGXRCAV 194
>gi|297195902|ref|ZP_06913300.1| glutamate racemase [Streptomyces pristinaespiralis ATCC 25486]
gi|297152990|gb|EFH32086.1| glutamate racemase [Streptomyces pristinaespiralis ATCC 25486]
Length = 270
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 61/245 (24%), Positives = 94/245 (38%), Gaps = 15/245 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I + DSGIG L +R L P+ + +D P+G + R + +
Sbjct: 11 KIALMDSGIGLLAAAAVVRTLRPDADLVLSSDPGSMPWGPRTPDDVAGRAL-TVARAAAA 69
Query: 75 YQPVLSVIACNTAFTLIKDELR-STFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++P ++ACNTA LR PS+ +G VPAIK AAA G ++I +TPAT
Sbjct: 70 HKPDALIVACNTASVHALPALRAELEPSIPVIGTVPAIKPAAA--GGGPVAIWATPATTG 127
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
Y LI + + V LA VE + + +
Sbjct: 128 SPYQRGLIKEFAGSVEVTEVPCPGLADAVERADKDAIDRAVAAAAALTP-------RDVR 180
Query: 194 VIVLACTHYPLIVHVFRQLSP----WPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+VL CTHY L+ R P+ ++ ++A +A +
Sbjct: 181 AVVLGCTHYELVSERIRAAVQQPGLPPLVLHGSAGAVAAQALRRIGAEPAPDASPSGRLT 240
Query: 250 LFLSG 254
+ LSG
Sbjct: 241 VLLSG 245
>gi|225552350|ref|ZP_03773290.1| glutamate racemase [Borrelia sp. SV1]
gi|225371348|gb|EEH00778.1| glutamate racemase [Borrelia sp. SV1]
Length = 261
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 49/209 (23%), Positives = 92/209 (44%), Gaps = 11/209 (5%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K + I+IFDSGIGGL + ++ + E ++YVAD+ FPYG L + ++FL
Sbjct: 1 MKNFKEVIIIFDSGIGGLSYFKYIKSRIGECQYVYVADNKNFPYGEKSPEYLLEAVLFLI 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ Y V+ACNT + ++L FP + L V ++ + +++T
Sbjct: 61 EKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRVLLIAT 116
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
TL + + ++ + + + ++ L + VE + + + +E E
Sbjct: 117 NTTLESKFVKDQVNIHND---LIVKAAGELVNFVEYGE----NYKKDALRCLEALKFEVV 169
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPV 217
+++ L CTHY + + PV
Sbjct: 170 NTGREIVFLGCTHYLHLKAMIEDFLKIPV 198
>gi|195941838|ref|ZP_03087220.1| glutamate racemase (murI) [Borrelia burgdorferi 80a]
Length = 261
Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 11/209 (5%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + ++FL
Sbjct: 1 MKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEAVLFLI 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ Y V+ACNT + ++L FP + L V ++ + +++T
Sbjct: 61 EKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRVLLIAT 116
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
TL + + ++ + + + ++ L + VE + + + +E E
Sbjct: 117 NTTLESKFVKDQVNIHND---LIVKAAGELVNFVEYGE----NYKKDALRCLEALKFEVV 169
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPV 217
+++ L CTHY + + PV
Sbjct: 170 NTGREIVFLGCTHYLHLKAMIEDFLKIPV 198
>gi|328880727|emb|CCA53966.1| Glutamate racemase [Streptomyces venezuelae ATCC 10712]
Length = 264
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 64/250 (25%), Positives = 99/250 (39%), Gaps = 18/250 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I + DSGIG L +R L P+ + D G P+G L R + +
Sbjct: 2 KIALMDSGIGLLPAAAAVRRLRPDADLLLSNDPDGMPWGPRTPEDLTGR-ALAVALAAAE 60
Query: 75 YQPVLSVIACNTAFTLIKDELRST-FPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++P ++ACNTA +R+ P +A +G VPAIK AAA G ++I +TPAT
Sbjct: 61 HRPQALIVACNTATVHALPAIRAALEPDIAVIGTVPAIKPAAA--GGGKVAIWATPATTG 118
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
Y LI + + V LA VE + E +
Sbjct: 119 SAYQRGLIRDFADGAEVTEVPCPGLADAVEH-------ADPEAVDRAVAAAAALTPRDVR 171
Query: 194 VIVLACTHYPLIVHVFRQLSP-------WPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
+VL CTHY L+ P+ + ++D++A +A +
Sbjct: 172 TVVLGCTHYELVEERILAALDARGRAGLPPIVFHGSADAVAAQALRRVGAEPAPAAAPTG 231
Query: 247 DHALFLSGKP 256
++ LSG+P
Sbjct: 232 TLSVLLSGRP 241
>gi|312147962|gb|ADQ30621.1| glutamate racemase [Borrelia burgdorferi JD1]
Length = 261
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 49/209 (23%), Positives = 90/209 (43%), Gaps = 11/209 (5%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + ++FL
Sbjct: 1 MKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEAVLFLI 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ Y V+ACNT + ++L FP + L V ++ + +++T
Sbjct: 61 EKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRVLLIAT 116
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
TL + + ++ + + + ++ L + VE K + +E E
Sbjct: 117 NTTLESKFVKDQVNIHND---LIVKAAGELVNFVEYGENYKKYAL----RCLEALKFEVV 169
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPV 217
+++ L CTHY + + PV
Sbjct: 170 NTGREIVFLGCTHYLHLKAMIEDFLKIPV 198
>gi|254485925|ref|ZP_05099130.1| putative glutamate racemase [Roseobacter sp. GAI101]
gi|214042794|gb|EEB83432.1| putative glutamate racemase [Roseobacter sp. GAI101]
Length = 189
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 63/179 (35%), Gaps = 14/179 (7%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
++ IFDSG+GGL V ++ +P+ F+Y+AD PYG + + + L
Sbjct: 2 AVGIFDSGLGGLTVWNAVQAQLPDVEFVYLADSAHAPYGVRTSDDIYNLTVA-ATQRLFD 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA---VPAIKQAAAYTQSG---------- 121
L ++ACNTA ++ ++ VP I+
Sbjct: 61 AGCDLVILACNTASAAALRRMQESWVPSDKRVLGVFVPLIESMTERQWGDNSPPREVDLK 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+++ +TPAT+ + + + + +E+ +
Sbjct: 121 HVALFATPATVASRAFQRELAFRAIGVDVEAQACGGVVDAIEDGDXXXXXXXPIWWRIA 179
>gi|15594446|ref|NP_212234.1| glutamate racemase (murI) [Borrelia burgdorferi B31]
gi|11386901|sp|O51127|MURI_BORBU RecName: Full=Glutamate racemase
gi|2687975|gb|AAC66479.1| glutamate racemase (murI) [Borrelia burgdorferi B31]
Length = 261
Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 49/209 (23%), Positives = 90/209 (43%), Gaps = 11/209 (5%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + ++FL
Sbjct: 1 MKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEAVLFLI 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ Y V+ACNT + ++L FP + L V ++ + +++T
Sbjct: 61 EKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRVLLIAT 116
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
TL + + ++ + + + ++ L + VE K + +E E
Sbjct: 117 NTTLESKFVKDQVNIHND---LIVKAAGELVNFVEYGENYKKYAL----RCLEALKFEVV 169
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPV 217
+++ L CTHY + + PV
Sbjct: 170 NTGREIVFLGCTHYLHLKVMIEDFLKIPV 198
>gi|312149583|gb|ADQ29654.1| glutamate racemase [Borrelia burgdorferi N40]
Length = 261
Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 11/209 (5%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + ++FL
Sbjct: 1 MKNFKEVIIIFDSGIGGLSYFKYIKSRIGGCQYVYVADNKNFPYGEKSPEYLLEAVLFLI 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ Y V+ACNT + ++L FP + L V ++ + +++T
Sbjct: 61 EKLKKIYNIGALVLACNTISVSVYNKLNFVFPVVYTLPDVSSVSDLVL----KRVLLIAT 116
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
TL + + ++ + + + ++ L + VE + + + +E E
Sbjct: 117 NTTLESKFVKDQVNIHND---LIVKAAGELVNFVEYGE----NYKKDAFRCLEALKFEVV 169
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPV 217
+++ L CTHY + + PV
Sbjct: 170 NTGREIVFLGCTHYLHLKTLIEDFLKIPV 198
>gi|307325961|ref|ZP_07605160.1| Glutamate racemase [Streptomyces violaceusniger Tu 4113]
gi|306888453|gb|EFN19440.1| Glutamate racemase [Streptomyces violaceusniger Tu 4113]
Length = 259
Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 61/243 (25%), Positives = 94/243 (38%), Gaps = 17/243 (6%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSGIG L MR L P+ + +D P+G + + + + ++P
Sbjct: 1 MDSGIGLLPTAAAMRRLRPDADLLLSSDPATMPWGPRTPEDVTELALG-CARAAAAHRPD 59
Query: 79 LSVIACNTAFTLIKDELR-STFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
++ACNTA LR P + +G VPAIK AAA G I+I +TPAT Y
Sbjct: 60 ALIVACNTASVHALPALRAELEPVLPVVGTVPAIKPAAA--GGGPIAIWATPATTGSPYQ 117
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
LI + + V LA V+ +DE + + +VL
Sbjct: 118 RGLIRDFADGVEVTEVPCPGLADAVQH-------ADDEGIDAAVAAAAARTPREVTTVVL 170
Query: 198 ACTHYPLIVHVFRQL----SPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFDDHALF 251
CTHY L+ R + P+ ++ ++A +A + +
Sbjct: 171 GCTHYELVADRIRAAVQQPAAPPIALHGSAGAVAAQALRRIGADPFPPDGLVAPGGLTVI 230
Query: 252 LSG 254
LSG
Sbjct: 231 LSG 233
>gi|329766264|ref|ZP_08257822.1| glutamate racemase [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329137323|gb|EGG41601.1| glutamate racemase [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 253
Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats.
Identities = 56/252 (22%), Positives = 105/252 (41%), Gaps = 17/252 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I IFDSG+G L V+++++ + + IY AD FPYG +KK + + I + +
Sbjct: 4 IAIFDSGLGSLSVIKQIQKQI-KCDIIYFADSKNFPYGKKSIKEIKKITLQTITTIQNLF 62
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+P L ++ NT L S ++ +P + +A T+S I+IL+T + ++
Sbjct: 63 KPDLIIVGSNTLSLT----LTSHSKNIII--VLPPLSEAQKITKSKSIAILATESIVKSK 116
Query: 136 YTSNLIH-SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI-EKEGKRTD 193
+ I+ ++ I +++ L VE + K I+ + D
Sbjct: 117 LLDSYINLFQINNTKIIKINASPLVELVESGKF--YSDQKYCKVIIKKTLDYKLIRNNVD 174
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
V+ L+ TH P ++ +++ P V +LD S + + +F S
Sbjct: 175 VVTLSSTHLPFLLKFLKEIFP-HVTFLDPSIL-----LAKKLKKKYSNDNKRNSLQIFTS 228
Query: 254 GKPDIAMRRLMQ 265
G +L
Sbjct: 229 GNIKSLKIKLKH 240
>gi|207093320|ref|ZP_03241107.1| glutamate racemase [Helicobacter pylori HPKX_438_AG0C1]
Length = 156
Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 65/158 (41%), Gaps = 6/158 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPAT 131
+Q L ++ACNTA L +E++ P+I ++ I +L T AT
Sbjct: 60 PHQIELLIVACNTASALALEEMQKHSKIPVVGVIEPSILAIKQQVKDKNAPILVLGTKAT 119
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
++ N + ++ +++ + +EE
Sbjct: 120 IQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG 156
>gi|224534952|ref|ZP_03675521.1| glutamate racemase [Borrelia spielmanii A14S]
gi|224513892|gb|EEF84217.1| glutamate racemase [Borrelia spielmanii A14S]
Length = 260
Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats.
Identities = 49/256 (19%), Positives = 103/256 (40%), Gaps = 18/256 (7%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K + I+IFDSGIGGL + ++ + ++YVAD+ FPYG L + ++FL
Sbjct: 1 MKNFKEVIIIFDSGIGGLSYFEYIKSKLGGCQYVYVADNKNFPYGKKSPEYLLEAVLFLI 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ Y ++ACNT + ++L FP + L V + A + +++T
Sbjct: 61 ERLKKIYNVSALILACNTISVSVYNKLNFVFPVVYTLPEVSLVSDLAL----KRVLLIAT 116
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
TL + + ++ + + + ++ L + VE + + + +E E
Sbjct: 117 NTTLESKFVKDQVNMHND---LIVKAAGELVNFVEYGKK----YKKDALRCLEALKSEVV 169
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
+++ L CTHY + + + +N + + + + + +D
Sbjct: 170 NTGREIVFLGCTHYLHLKSMIEDFL--KIPVYENRELVVQNLIRSINFSKYKDSYYKNDI 227
Query: 249 ----ALFLSGKPDIAM 260
+L+ +
Sbjct: 228 DFADEFYLTSN-ENFT 242
>gi|126348285|emb|CAJ90006.1| putative glutamate racemase [Streptomyces ambofaciens ATCC 23877]
Length = 280
Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats.
Identities = 62/245 (25%), Positives = 95/245 (38%), Gaps = 15/245 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I + DSGIG L +R L P+ I D G P+G L R ++
Sbjct: 21 KIALMDSGIGLLAATAAVRRLRPDADLILSLDPDGMPWGPRTPEDLTGR-ALAVAEAAAA 79
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++P ++ CNTA LR+ F P++ +G VPAIK AAA G ++I +TPAT
Sbjct: 80 HRPDALIVGCNTATVHALPALRARFEPALPVIGTVPAIKPAAA--GGGPVAIWATPATTG 137
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
Y +LI + + + V LA VE ++
Sbjct: 138 SPYQRDLIERFGGEATVTEVPCPGLADAVEH-------ADEAAITAAVAAAAALTPGDVT 190
Query: 194 VIVLACTHYPLIVHVFRQLS----PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+VL CTHY L+ R + ++ ++A +A +
Sbjct: 191 TVVLGCTHYELVAERIRAAVQRPGAPRLVLHGSAGAVAAQALRRIGVRPDPGAPAEGTLT 250
Query: 250 LFLSG 254
+ LSG
Sbjct: 251 VLLSG 255
>gi|121730805|ref|ZP_01682883.1| ATPase of the AAA+ class [Vibrio cholerae V52]
gi|121627620|gb|EAX60302.1| ATPase of the AAA+ class [Vibrio cholerae V52]
Length = 129
Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats.
Identities = 47/131 (35%), Positives = 80/131 (61%), Gaps = 6/131 (4%)
Query: 12 LQNS----ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ + +LIFDSG+GGL V +++ +P+ ++IY+ D+ +PYG L R+ L
Sbjct: 1 MSSPSFPRVLIFDSGVGGLSVYREIEARLPQLNYIYLFDNAAYPYGELTQETLIARVDTL 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ ++++ + L VIACNTA T++ LR+ ++ +G VPAIK A+ S I +++
Sbjct: 61 VTRMVEQERIDLVVIACNTASTIVLPVLRAKL-TIPVVGVVPAIKPASLI-ASKAIGLIA 118
Query: 128 TPATLRRTYTS 138
TPAT++R YT
Sbjct: 119 TPATVKRQYTQ 129
>gi|317124440|ref|YP_004098552.1| glutamate racemase [Intrasporangium calvum DSM 43043]
gi|315588528|gb|ADU47825.1| glutamate racemase [Intrasporangium calvum DSM 43043]
Length = 286
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 64/236 (27%), Positives = 98/236 (41%), Gaps = 14/236 (5%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKK 62
D P + + DSGIG L +R L P+ + D PYG +++
Sbjct: 6 ADLAPMTTRPPRRVAFVDSGIGLLGYADALRALRPDLELVLALDPDHMPYGPRSPGEVRE 65
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELR-STFPSMAFLGAVPAIKQAAAYTQSG 121
++ + + L V ACNTA + LR P + +G VPAI+ AA T G
Sbjct: 66 LILASAAAAAELEPVALVV-ACNTASVHGLEALRAELEPGLPVIGTVPAIRPAA--TTGG 122
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+SI ST AT Y L+ ++ S+ H ++++ LA VE + EI + I
Sbjct: 123 PVSIWSTAATSSSDYLRGLVDAFASEVETHSIAALGLAEAVE------AVDPAEIDRAIG 176
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS---PWPVDWLDNSDSIARRARCLL 234
E T +VL CTHY L+ V D+ ++AR+ +
Sbjct: 177 AALAE-TPADTRALVLGCTHYGLVADRISAALNSRGSEVTIFDSPVAVARQTLRRI 231
>gi|224532254|ref|ZP_03672886.1| glutamate racemase [Borrelia valaisiana VS116]
gi|224511719|gb|EEF82125.1| glutamate racemase [Borrelia valaisiana VS116]
Length = 260
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 52/251 (20%), Positives = 107/251 (42%), Gaps = 17/251 (6%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K + I++FDSGIGGL + ++ + Y ++YVAD+ FPYG L + ++FL
Sbjct: 1 MKNFKEVIIVFDSGIGGLSYFKYIKSKIEGYQYVYVADNKNFPYGEKSSDYLLQSVLFLI 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ Y + V+ACNT + ++L FP + L V ++ + A + +++T
Sbjct: 61 EKLKKIYNIIALVLACNTISVSVYNKLNFVFPVIYTLPEVSSVSELAL----KKVLLIAT 116
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
TL + + ++ + + + ++ L + VE + + +E E
Sbjct: 117 NTTLESKFVKDQVNIHDD---LIVKAAGELVNFVEYGEK----FRKDALRCLEALKFEVV 169
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP----RINTHQTRV 244
+++ L CTHY + + + +N + + + + + N H+ V
Sbjct: 170 HTGREIVFLGCTHYLHLKAMIEDFL--KIPVYENRELVVQSLIRSINFFECKGNYHKNDV 227
Query: 245 FDDHALFLSGK 255
+L+
Sbjct: 228 NFVDEFYLTKN 238
>gi|256789389|ref|ZP_05527820.1| glutamate racemase [Streptomyces lividans TK24]
gi|289773278|ref|ZP_06532656.1| glutamate racemase [Streptomyces lividans TK24]
gi|289703477|gb|EFD70906.1| glutamate racemase [Streptomyces lividans TK24]
Length = 280
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 62/245 (25%), Positives = 92/245 (37%), Gaps = 15/245 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I + DSGIG L +R L P+ I D G P+G L R ++
Sbjct: 21 KIALMDSGIGLLAATAAVRRLRPDADLILSLDPDGMPWGPRTPKDLTGR-ALAVAEAAAA 79
Query: 75 YQPVLSVIACNTAFTLIKDELRST-FPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++P ++ CNTA LR+ P + +G VPAIK AAA G ++I +TPAT
Sbjct: 80 HRPDALIVGCNTATVHALPALRARLEPDVPVIGTVPAIKPAAA--GGGPVAIWATPATTG 137
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
Y LI + + V LA VE ++ E
Sbjct: 138 SPYQRGLIEDFAGDTEVTEVPCPGLADAVEH-------ADETAITEAVAAAAALTPDDVT 190
Query: 194 VIVLACTHYPLIVHVFRQLS----PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+VL CTHY L+ R + ++ ++A +A +
Sbjct: 191 TVVLGCTHYELVAERIRAAVQRPGAPRLVLHGSAGAVAAQALRRIGARPDPGAPATGTLT 250
Query: 250 LFLSG 254
+ LSG
Sbjct: 251 VLLSG 255
>gi|302549431|ref|ZP_07301773.1| glutamate racemase [Streptomyces viridochromogenes DSM 40736]
gi|302467049|gb|EFL30142.1| glutamate racemase [Streptomyces viridochromogenes DSM 40736]
Length = 283
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 65/245 (26%), Positives = 91/245 (37%), Gaps = 15/245 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I + DSGIG L +R L P+ + D G P+G L +R + + +
Sbjct: 2 KIALMDSGIGLLAATTAVRRLRPDADLVLSLDPDGMPWGPRTPENLTERALAVAEAAAAR 61
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
L V CNTA LR+ F P + +G VPAIK AAA G +I +TPAT
Sbjct: 62 RPDALIV-GCNTATVHALTALRARFEPDLPVIGTVPAIKPAAA--GGGHFAIWATPATTG 118
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
TY LI + + V LA VE +
Sbjct: 119 STYQRTLIRDFADGVPVTEVPCWGLAEAVEHADEAAIAAAVAAAAALTP-------DEVT 171
Query: 194 VIVLACTHYPLIVHVFRQLSP----WPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+VL CTHY L+ R P+ ++ ++A +A L
Sbjct: 172 TVVLGCTHYELVAERIRAAVQRPGRPPLVLHGSAGAVAAQALRRLGEQPAPSATPLGTLT 231
Query: 250 LFLSG 254
+ LSG
Sbjct: 232 VLLSG 236
>gi|17902530|emb|CAC81005.1| glutamate racemase [Pseudanabaena sp. PCC 6903]
Length = 115
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+++ + I +FDSG+GGL VLQ++ +P +Y D PYG + + + +
Sbjct: 6 QQEARFPIGVFDSGVGGLTVLQEVHRQLPNESVVYFGDTARLPYGKRSPAEIIEYVYEIL 65
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELR 96
+ + ++++ACNT+ L D +R
Sbjct: 66 -HWMQSLEVKMAIMACNTSSALALDVVR 92
>gi|297197689|ref|ZP_06915086.1| glutamate racemase [Streptomyces sviceus ATCC 29083]
gi|297146828|gb|EFH28366.1| glutamate racemase [Streptomyces sviceus ATCC 29083]
Length = 262
Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats.
Identities = 59/245 (24%), Positives = 90/245 (36%), Gaps = 15/245 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I + DSGIG L +R L P+ + D G P+G + R ++
Sbjct: 2 KIALLDSGIGLLAATAAVRRLRPDADLVLSLDPDGMPWGPRTPDDIIGR-ALTLAEAAAA 60
Query: 75 YQPVLSVIACNTAFTLIKDELRST-FPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ P +I CNTA LR+ P + +G VPAIK AA + G +I +TPAT
Sbjct: 61 HGPEALIIGCNTATVHALTALRARLEPDLPVIGTVPAIKPAA--SAGGPFAIWATPATTG 118
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
Y L+ + V LA VE + +
Sbjct: 119 SPYQRGLLAEFADGVPATEVPCHGLAEAVEHADEAAIDAAVAAAAALTP-------EDVT 171
Query: 194 VIVLACTHYPLIVHVFRQLSP----WPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+VL CTHY L+ R P+ ++ ++A +A + +
Sbjct: 172 TVVLGCTHYELVAERIRAAVQRPGRPPLVLHGSAGAVAAQALRRIGEQPAPEAAATGTLT 231
Query: 250 LFLSG 254
+ LSG
Sbjct: 232 VLLSG 236
>gi|239833140|ref|ZP_04681469.1| Glutamate racemase [Ochrobactrum intermedium LMG 3301]
gi|239825407|gb|EEQ96975.1| Glutamate racemase [Ochrobactrum intermedium LMG 3301]
Length = 278
Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats.
Identities = 56/255 (21%), Positives = 103/255 (40%), Gaps = 4/255 (1%)
Query: 1 MKIDNYPCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
+K + P + L + + +FD+GIG +++ +R P+ IY AD FPYG L
Sbjct: 2 LKHETAPAVENLHDPVAVFDAGIGSYALVELIRRSQPQRDIIYFADRASFPYGAKSRDQL 61
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
+ L V+A N ++ D L+S F ++ G P ++ A A ++S
Sbjct: 62 LSIMRHTI-RYLTGLGAQTIVLASNAPSVMVLDALKSEF-AVPVYGVAPPVRAAFAASRS 119
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCH-IHLVSSMILASRVEEYACGIKIKEDEIKKE 179
G ++++ + + + + + + + L+++ + VE A + E K
Sbjct: 120 GKVAVMGVRSMIESEELARFVRAEADRPEDVALINASAMVELVENGAFLRQPGETGQKVA 179
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
I R D + L+ TH P + F P +LD +D + L
Sbjct: 180 AFCDEIAASHPRIDTLTLSSTHLPWLRSFFETARPD-WRFLDPADDVIAALPQPLGGSGR 238
Query: 240 HQTRVFDDHALFLSG 254
V + A +SG
Sbjct: 239 TVALVTESDAYPVSG 253
>gi|51598363|ref|YP_072551.1| glutamate racemase [Borrelia garinii PBi]
gi|51572934|gb|AAU06959.1| glutamate racemase [Borrelia garinii PBi]
Length = 260
Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats.
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 11/209 (5%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K + I++FDSGIGGL + ++ M Y ++YVAD+ FPYG L + +++L
Sbjct: 1 MKNFKEVIIVFDSGIGGLSYFKYIKNKMDGYQYVYVADNKNFPYGEKSSEYLLEAVLYLI 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ Y ++ACNT + ++L FP + L V +I + +++T
Sbjct: 61 EKLNKIYNISALILACNTISVSVYNKLNFIFPVVYTLPEVSSISDLVL----KRVLLIAT 116
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
TL + + ++ + + + ++ L + VE + + +E E
Sbjct: 117 NTTLESKFVKDQVNMHND---LIIKAAGELVNFVEYGEK----YRKDAIRCLEALKFEVV 169
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPV 217
+++ L CTHY + + PV
Sbjct: 170 NTGREIVFLGCTHYLHLKAMIEDFLKIPV 198
>gi|325138574|gb|EGC61136.1| glutamate racemase 1 [Neisseria meningitidis ES14902]
Length = 191
Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 30/175 (17%), Positives = 63/175 (36%), Gaps = 6/175 (3%)
Query: 95 LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVS 154
++ K A A T++ I I++T T+ + IH + +
Sbjct: 10 VKKPGNMPVLDVISAGAKAALATTRNNKIGIIATNTTVNSNAYARAIHRNNPDTLVRTQA 69
Query: 155 SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214
+ +L VE ++ + + + D +VL CTH+PL+ + + +
Sbjct: 70 APLLVPLVE----EGWLEHEVTRLTVCEYLKPLLADGIDTLVLGCTHFPLLKPLIGREAH 125
Query: 215 WPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALFLSGKPDIAMRRLMQGFG 268
V +D++ + A +L + T D+ ++S P + G
Sbjct: 126 -NVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRFYVSDIPLKFRTIGERFLG 179
>gi|325142727|gb|EGC65104.1| glutamate racemase 1 [Neisseria meningitidis 961-5945]
Length = 185
Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats.
Identities = 30/175 (17%), Positives = 63/175 (36%), Gaps = 6/175 (3%)
Query: 95 LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVS 154
++ K A A T++ I I++T T+ + IH + +
Sbjct: 4 VKKPGNMPVLDVISAGAKAALATTRNNKIGIIATNTTVNSNAYARAIHRNNPDTLVRTQA 63
Query: 155 SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214
+ +L VE ++ + + + D +VL CTH+PL+ + + +
Sbjct: 64 APLLVPLVE----EGWLEHEVTRLTVCEYLKPLLADGIDTLVLGCTHFPLLKPLIGREAH 119
Query: 215 WPVDWLDNSDSIARRARCLLPRINTHQT-RVFDDHALFLSGKPDIAMRRLMQGFG 268
V +D++ + A +L + T D+ ++S P + G
Sbjct: 120 -NVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRFYVSDIPLKFRTIGERFLG 173
>gi|238764511|ref|ZP_04625459.1| Glutamate racemase [Yersinia kristensenii ATCC 33638]
gi|238697323|gb|EEP90092.1| Glutamate racemase [Yersinia kristensenii ATCC 33638]
Length = 186
Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats.
Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 4/180 (2%)
Query: 93 DELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHL 152
LR F +G VPAIK A T++G++ +L+T T+ +YT +LI + + C I L
Sbjct: 4 PALRERF-DFPVVGVVPAIKPAVRLTRNGVVGLLATRGTVHASYTLDLIERFATDCKIEL 62
Query: 153 VSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQL 212
+ S L E G + + +KK + +E D IVL CTH+PL+ Q+
Sbjct: 63 LGSSELVELAETKLHGGAVPPEALKKILHPWLAMREPP--DTIVLGCTHFPLLSDELAQV 120
Query: 213 SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDI-AMRRLMQGFGLKS 271
P +D+ +IARR L+ + ++ A ++ D A+ ++QG+G +
Sbjct: 121 LPEGTRMVDSGAAIARRTAWLISSQENVVSSQAENIAYCMALNTDTDALLPVLQGYGFPT 180
>gi|290962603|ref|YP_003493785.1| glutamate racemase [Streptomyces scabiei 87.22]
gi|260652129|emb|CBG75261.1| putative glutamate racemase [Streptomyces scabiei 87.22]
Length = 268
Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats.
Identities = 58/239 (24%), Positives = 89/239 (37%), Gaps = 15/239 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I + DSGIG L +R L P+ + +D G P+G L +R + + +
Sbjct: 2 KIALMDSGIGLLPAAAAVRRLRPDADLVISSDPDGMPWGPRTPQDLTERALAVATAAAAH 61
Query: 75 YQPVLSVIACNTAFTLIKDELRS-TFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
L V CNTA LR+ P + +G VPAIK AA + G +I +TPAT
Sbjct: 62 APDALIV-GCNTASVHALPALRALLEPGLPVIGTVPAIKPAA--SGGGPFTIWATPATTG 118
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
Y LI + + V LA VE +
Sbjct: 119 SPYQRGLIEEFAGGVAVTEVPCWGLAEAVEHADDAAIDAAIAAAAALTP-------ADVT 171
Query: 194 VIVLACTHYPLIVHVFRQLS--PWPVDWL--DNSDSIARRARCLLPRINTHQTRVFDDH 248
+VL CTHY L+ R P + + ++ ++A +A + + +
Sbjct: 172 TVVLGCTHYELVAERIRAAVQQPGRLPLVLHGSAGAVAAQALRRIGELPKPEADWTGAT 230
>gi|255030221|ref|ZP_05302172.1| glutamate racemase [Listeria monocytogenes LO28]
Length = 96
Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
++ +I DSG+GGL V++++ +P Y+ D PYG + + K ++
Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWE-MTNF 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA 107
L + VIACNTA ++R
Sbjct: 60 LVDRGIKMLVIACNTATAAALYDIREKLDIPVIGVI 95
>gi|219685353|ref|ZP_03540172.1| glutamate racemase [Borrelia garinii Far04]
gi|219673126|gb|EED30146.1| glutamate racemase [Borrelia garinii Far04]
Length = 260
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 49/251 (19%), Positives = 102/251 (40%), Gaps = 17/251 (6%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
K + I++FDSGIGGL + ++ + Y ++YVAD+ FPYG L + +++L
Sbjct: 1 MKNFKEVIIVFDSGIGGLSYFKYIKNKIDGYQYVYVADNKNFPYGEKSSEYLLEAILYLI 60
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ Y ++ACNT + ++L FP + L V I A + +++T
Sbjct: 61 EKLNKIYNISALILACNTISVSVYNKLNFVFPVVYTLPEVSLISDLAL----KRVLLIAT 116
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
TL + + ++ + + + ++ L + VE + + +E E
Sbjct: 117 NTTLESKFVKDQVNIHND---LIVKAAGELVNFVEHGEK----YRKDALRCLEALKFEVV 169
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
+++ L CTHY + + + +N + + + + + +D
Sbjct: 170 NTDREIVFLGCTHYLHLKSMIEDFL--KIPVYENRELVVQSLIRSINFPQCKDSYYKNDV 227
Query: 249 ----ALFLSGK 255
+L+
Sbjct: 228 DLVDEFYLTKN 238
>gi|237740830|ref|ZP_04571311.1| glutamate racemase [Fusobacterium sp. 4_1_13]
gi|229431127|gb|EEO41339.1| glutamate racemase [Fusobacterium sp. 4_1_13]
Length = 257
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 47/226 (20%), Positives = 89/226 (39%), Gaps = 12/226 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I +FD+G+G +++ +R P+ IY AD FPYG LK +
Sbjct: 1 MNKPIAVFDAGLGSYAIVEAIRKAYPQQDIIYFADRKSFPYGAKTIEELKTIIKKSVD-F 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + V+A N + D++++ + G P +K + I+
Sbjct: 60 LLEKGASFIVLASNAPSITVLDKIKNKNKVI---GIYPPLKN-VLNDRRKNTLIIGAKVM 115
Query: 132 LRRTYTSNLIHSY--VSQCHIHLVSSMILASRVEEYAC--GIKIKEDEIKKEIEGCFIEK 187
+ + + I H+ ++ L +E + E I+ I+ C E
Sbjct: 116 IESSELQDYIKKEVGDYCKQFHVENASPLIQLIESGDFINNTEETEKTIRNFIDNC--EN 173
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+ + D I L+ TH P I F+++ P V D +D++ + +
Sbjct: 174 KFGKLDSITLSSTHLPWISSYFKKIIPE-VKLYDPADNLVKAIKNY 218
>gi|256846771|ref|ZP_05552226.1| glutamate racemase [Fusobacterium sp. 3_1_36A2]
gi|256717737|gb|EEU31295.1| glutamate racemase [Fusobacterium sp. 3_1_36A2]
Length = 257
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 47/226 (20%), Positives = 89/226 (39%), Gaps = 12/226 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I +FD+G+G +++ +R P+ IY AD FPYG LK +
Sbjct: 1 MNKPIAVFDAGLGSYAIVEAIRKAYPQQDIIYFADRKSFPYGAKTIEELKTIIKKSVD-F 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + V+A N + D++++ + G P +K + I+
Sbjct: 60 LLEKGASFIVLASNAPSITVLDKIKNKNKVI---GIYPPLKN-VLNDRRKNTLIIGAKVM 115
Query: 132 LRRTYTSNLIHSY--VSQCHIHLVSSMILASRVEEY--ACGIKIKEDEIKKEIEGCFIEK 187
+ + + I H+ ++ L +E + E I+ I+ C E
Sbjct: 116 IESSELQDYIKREVGDYCKQFHVENASPLIQLIESGNFINNTEETEKTIRNFIDNC--EN 173
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+ + D I L+ TH P I F+++ P V D +D++ + +
Sbjct: 174 KFGKLDSITLSSTHLPWISSYFKKIIPE-VKLYDPADNLVKAIKNY 218
>gi|239983757|ref|ZP_04706281.1| glutamate racemase [Streptomyces albus J1074]
gi|291455563|ref|ZP_06594953.1| glutamate racemase [Streptomyces albus J1074]
gi|291358512|gb|EFE85414.1| glutamate racemase [Streptomyces albus J1074]
Length = 261
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 61/255 (23%), Positives = 96/255 (37%), Gaps = 15/255 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I + DSGIG L +R L P+ + +D P+G L ++ +
Sbjct: 2 KIALVDSGIGLLPAAAAVRRLRPDADLVLSSDPDSMPWGPRTPEDL-SAHALAVAEAAAE 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+ P V+ACNTA LR F P + +G VPAIK AAA G ++I +TPAT
Sbjct: 61 HAPDALVVACNTASVHALPALRERFEPGLPVIGTVPAIKPAAAA--GGHVAIWATPATTG 118
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
Y LI + + V+ LA V+ + +
Sbjct: 119 SPYQRRLIAEFSGSTPVTEVACPGLADAVQW-------DDPTAVAAAIADAAARTPSTVT 171
Query: 194 VIVLACTHYPLIVHVFRQLS----PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+VL CTHY L+ R P+ ++ ++A +A L
Sbjct: 172 SVVLGCTHYELVGDAIRTAVEHSGTGPLTLHGSAPAVAAQALRRLGVAPDPAAPATGTLT 231
Query: 250 LFLSGKPDIAMRRLM 264
+ L+G+ + +
Sbjct: 232 VLLNGRAEPLPAAAL 246
>gi|289809548|ref|ZP_06540177.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. AG3]
Length = 169
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 81/165 (49%), Gaps = 3/165 (1%)
Query: 108 VPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC 167
+PAIK AA T +G++ +L+T AT++R YT LI + ++C I ++ S L E
Sbjct: 1 MPAIKPAARLTANGVVGLLATRATVKRPYTHELIARFANECQIAMLGSAELVELAEAKLH 60
Query: 168 GIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
G + +E+++ + E D +VL CTH+PL+ Q+ P +D+ +IA
Sbjct: 61 GDSVSLEELRRILRPWLRMPEPP--DTVVLGCTHFPLLRDELLQVLPEGTRLVDSGAAIA 118
Query: 228 RRARCLLPRINTHQTRVFDDHALFLSGKP-DIAMRRLMQGFGLKS 271
RR LL + A ++ P + ++Q +G ++
Sbjct: 119 RRTAWLLEHEAPDAKSTDANIAYCMAMTPGAEQLLPVLQRYGFET 163
>gi|153008159|ref|YP_001369374.1| Asp/Glu racemase [Ochrobactrum anthropi ATCC 49188]
gi|151560047|gb|ABS13545.1| Asp/Glu racemase [Ochrobactrum anthropi ATCC 49188]
Length = 278
Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats.
Identities = 48/220 (21%), Positives = 89/220 (40%), Gaps = 4/220 (1%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
L + + +FD+GIG +++ +R P+ IY AD FPYG L +
Sbjct: 13 LNDPVAVFDAGIGSYALVELIRRSQPQRDIIYFADRASFPYGAKSRDQLLSIMRSTI-QY 71
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L V+A N ++ D L+S F ++ G P ++ A A + SG ++++ +
Sbjct: 72 LTSLGAQTIVLASNAPSVMVLDTLKSEF-AVPVYGVAPPVRTALAASHSGKVAVMGVRSM 130
Query: 132 LRRTYTSNLIHSYVSQC-HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
+ ++ + + + L+++ + VE A + E K I
Sbjct: 131 IESEELADFVRTQADNPGDVALINASAMVELVENGAFLRQPDETAQKVAAFCDDIAASYP 190
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
D + L+ TH P + F P +LD +D +
Sbjct: 191 LIDTLTLSSTHLPWLRPFFETARP-GWQFLDPADDVIAAL 229
>gi|326439557|ref|ZP_08214291.1| glutamate racemase [Streptomyces clavuligerus ATCC 27064]
Length = 281
Score = 118 bits (296), Expect = 7e-25, Method: Composition-based stats.
Identities = 66/260 (25%), Positives = 105/260 (40%), Gaps = 11/260 (4%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMF 66
P + + I + DSGIG L +R L P+ + D G P+G + +R
Sbjct: 14 PVDYGDRVKIALMDSGIGLLAAAAAVRGLRPDADLVLSQDPDGMPWGPRTPEGVTER-AL 72
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRST-FPSMAFLGAVPAIKQAAAYTQSGLISI 125
+ ++ P ++ACNTA LR+ P++ +G VPAIK AA G I+I
Sbjct: 73 AVARAAAEHAPDALIVACNTATVHALPALRAALEPAIPVIGTVPAIKPAAVA--GGPIAI 130
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
+TPAT Y +LI + + V LA V+ +DE
Sbjct: 131 WATPATTGSPYQRDLIGRFAGAVDVAEVPCPGLADAVDH-------ADDEAIDRAVAAAA 183
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+ + T +VL CTHY L+ R PV ++ ++A +A +
Sbjct: 184 ARTPRDTRAVVLGCTHYELVAERIRDAIGTPVALHGSAGAVAAQALRRIGAAPAPGATAS 243
Query: 246 DDHALFLSGKPDIAMRRLMQ 265
+ LSG+ R ++
Sbjct: 244 GTLTVLLSGRASALPDRALR 263
>gi|162147611|ref|YP_001602072.1| glutamate racemase [Gluconacetobacter diazotrophicus PAl 5]
gi|161786188|emb|CAP55770.1| putative glutamate racemase [Gluconacetobacter diazotrophicus PAl
5]
Length = 224
Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats.
Identities = 64/195 (32%), Positives = 94/195 (48%), Gaps = 3/195 (1%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+D P L VIACNTA TL LR + ++ F+G VP IK AA +++ I +L+T
Sbjct: 11 RAIDALDPDLVVIACNTASTLALPALRERY-TLPFVGCVPPIKWAAELSRTRTIGLLATR 69
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+RR Y +L Y C + + LA E G I D I +E++ F + G
Sbjct: 70 ATVRRPYLGDLQRRYAPDCTLLAHGARGLADLAECAFRGHAIATDAIDRELDALFGQPGG 129
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
DV+ + CTHY ++ R SP WLD ++++AR+A +L + T A
Sbjct: 130 AAIDVVGIGCTHYTFLMDRLRAASPPGTIWLDPAEAVARQAATVLGPLGT-AVPSRPARA 188
Query: 250 LFLSGKPDIAMRRLM 264
F + P R
Sbjct: 189 FF-TAAPAEPERLAA 202
>gi|126643405|ref|YP_001086389.1| glutamate racemase [Acinetobacter baumannii ATCC 17978]
Length = 188
Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats.
Identities = 36/183 (19%), Positives = 79/183 (43%), Gaps = 6/183 (3%)
Query: 87 AFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVS 146
+ + +R+ ++ + PA+K A A T S I++L+T T++ +LI +Y
Sbjct: 1 MTAVAVETIRAQI-NVPLIAIEPAVKPAVAMTLSKHIAVLATATTVKGKNLKSLIETYAQ 59
Query: 147 QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIV 206
+ LV + LA ++E E+K ++ ++ D I+L CTHYP +
Sbjct: 60 DIKVSLVPCIGLAEKIETGKA----HTAEVKDYLKNILAPLVEQKVDTIILGCTHYPFVS 115
Query: 207 HVFRQLSPWPVDWLDNSDSIARRARCLLPRINT-HQTRVFDDHALFLSGKPDIAMRRLMQ 265
+++ + ++ S+++ + L + + ++ +H ++ S P
Sbjct: 116 DTIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLSSESPNEGNHIIWTSSDPLEVADVTFS 175
Query: 266 GFG 268
G
Sbjct: 176 LLG 178
>gi|256027385|ref|ZP_05441219.1| Asp/Glu racemase [Fusobacterium sp. D11]
gi|289765349|ref|ZP_06524727.1| glutamate racemase [Fusobacterium sp. D11]
gi|289716904|gb|EFD80916.1| glutamate racemase [Fusobacterium sp. D11]
Length = 257
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 48/226 (21%), Positives = 89/226 (39%), Gaps = 12/226 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I +FD+G+G +++ ++ P+ IY AD FPYG LK +
Sbjct: 1 MNKPIAVFDAGLGSYAIVEAIKKAYPQQDIIYFADRKSFPYGAKTIEQLKTIIKNSID-F 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + V+A N + D++++ + G P +K + I+
Sbjct: 60 LSEKGASFIVLASNAPSITVLDKIKNNDKVI---GIYPPLKDVIKD-KMKNTLIIGAKVM 115
Query: 132 LRRTYTSNLIHSY--VSQCHIHLVSSMILASRVEEYAC--GIKIKEDEIKKEIEGCFIEK 187
+ + I S H+ ++ L +E A I E I+ I C E
Sbjct: 116 IESPELQDYIKREVGNSYKQFHVENASPLIQLIENGAFINNIMETEKTIRNFINDC--EN 173
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+ + D I L+ TH P + F+++ P V D +D++ + +
Sbjct: 174 KFGKLDSITLSSTHLPWLFSYFKKIIPE-VKLYDPADNLVKAIKNY 218
>gi|216263947|ref|ZP_03435941.1| glutamate racemase [Borrelia afzelii ACA-1]
gi|215979991|gb|EEC20813.1| glutamate racemase [Borrelia afzelii ACA-1]
Length = 261
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 49/252 (19%), Positives = 106/252 (42%), Gaps = 18/252 (7%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMR-FLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
K + I++FDSGIGGL + ++ + Y ++YVAD+ FPYG L + ++FL
Sbjct: 1 MKNFKEVIIVFDSGIGGLSYFKYIKSKVEGGYQYVYVADNKNFPYGEKSSEYLLEAVLFL 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ Y ++ACNT + ++L FP + L V +I A + +++
Sbjct: 61 IEKLKKIYNISALILACNTISVSVYNKLNFVFPVVYTLPEVSSISDLAL----KRVLLIA 116
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T TL + + ++ + + + ++ L + VE + + + +E E
Sbjct: 117 TNTTLESKFVKDQVNMH---EDLIVKAAGELVNFVEYGKK----YKKDALRCLEALKSEV 169
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP----RINTHQTR 243
+++ L CTHY + + + +N + + + + + + ++
Sbjct: 170 VNTGREIVFLGCTHYLHLKTMIEDFL--KIPVYENRELVVQSLIRSMNFPQYKSDYYENN 227
Query: 244 VFDDHALFLSGK 255
+ +L+
Sbjct: 228 IDFVDEFYLTKN 239
>gi|260497932|ref|ZP_05816049.1| glutamate racemase [Fusobacterium sp. 3_1_33]
gi|260196493|gb|EEW94023.1| glutamate racemase [Fusobacterium sp. 3_1_33]
Length = 257
Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 48/226 (21%), Positives = 89/226 (39%), Gaps = 12/226 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I +FD+G+G +++ ++ P+ IY AD FPYG LK +
Sbjct: 1 MNKPIAVFDAGLGSYAIVEAIKKAYPQQDIIYFADRKSFPYGAKTVEQLKTIIKNSID-F 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + V+A N + D++++ + G P +K + I+
Sbjct: 60 LSEKGASFIVLASNAPSITVLDKIKNNDKVI---GIYPPLKDVIKD-KMKNTLIIGAKVM 115
Query: 132 LRRTYTSNLIHSY--VSQCHIHLVSSMILASRVEEYAC--GIKIKEDEIKKEIEGCFIEK 187
+ + I S H+ ++ L +E A I E I+ I C E
Sbjct: 116 IESPELQDYIKREVGNSYKQFHVENASPLIQLIENGAFINNIMETEKTIRNFINDC--EN 173
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+ + D I L+ TH P + F+++ P V D +D++ + +
Sbjct: 174 KFGKLDSITLSSTHLPWLFSYFKKIIPE-VKLYDPADNLVKAIKNY 218
>gi|237744000|ref|ZP_04574481.1| glutamate racemase [Fusobacterium sp. 7_1]
gi|229433031|gb|EEO43243.1| glutamate racemase [Fusobacterium sp. 7_1]
Length = 257
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 47/226 (20%), Positives = 88/226 (38%), Gaps = 12/226 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I +FD+G+G +++ ++ P+ IY AD FPYG LK +
Sbjct: 1 MNKPIAVFDAGLGSYAIVEAIKKAYPQQDIIYFADRKSFPYGAKTVEQLKTIIKNSID-F 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + V+A N + D++++ + G P +K + I+
Sbjct: 60 LSEKGASFIVLASNAPSITVLDKIKNNDKII---GIYPPLKDVIKD-KMKNTLIIGAKVM 115
Query: 132 LRRTYTSNLIHSY--VSQCHIHLVSSMILASRVEEYAC--GIKIKEDEIKKEIEGCFIEK 187
+ + I H+ ++ L +E A I E I+ I C E
Sbjct: 116 IESPELQDYIKREVGNFYKQFHVENASPLIQLIENGAFINNIMETEKTIRNFINDC--EN 173
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+ + D I L+ TH P + F+++ P V D +D++ + +
Sbjct: 174 KFGKLDSITLSSTHLPWLFSYFKKIIPE-VKLYDPADNLVKAIKNY 218
>gi|54027044|ref|YP_121286.1| putative glutamate racemase [Nocardia farcinica IFM 10152]
gi|54018552|dbj|BAD59922.1| putative glutamate racemase [Nocardia farcinica IFM 10152]
Length = 253
Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 57/242 (23%), Positives = 97/242 (40%), Gaps = 12/242 (4%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ + DSG+G L +R L P+ + D G P+G + +R++ + I
Sbjct: 3 VALIDSGLGLLPTAAWLRKLRPDVDLLLQLDPDGAPWGPKPEQWTIERVVA-AARISIAA 61
Query: 76 QPVLSVIACNTAFTLIKDELR-STFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ V+ CNTA +++R P + +G VPAIK AAA + + +T AT
Sbjct: 62 GAEVIVLPCNTASVTALEQVRAEVGPEVPVIGTVPAIKPAAAACRRVAVW--ATAATTAS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y + LI + + V+ LA ++ T+
Sbjct: 120 RYQAELIEKFGGDAEVVGVACHGLADAIDRGDLTAATDAIARAAAQTP-------AGTEG 172
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VL CTHYPL+V P V D++ ++A + + + T + SG
Sbjct: 173 VVLGCTHYPLVVDAIVAALPAGVRLFDSAQAVAAQTIRKMEGLGRPTTG-EGVVRVLNSG 231
Query: 255 KP 256
+P
Sbjct: 232 RP 233
>gi|294782987|ref|ZP_06748311.1| glutamate racemase [Fusobacterium sp. 1_1_41FAA]
gi|294479865|gb|EFG27642.1| glutamate racemase [Fusobacterium sp. 1_1_41FAA]
Length = 257
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 50/226 (22%), Positives = 92/226 (40%), Gaps = 12/226 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +I +FD+G+G +++ ++ P+ IY AD FPYG LK + +
Sbjct: 1 MNKAIAVFDAGLGSYAIVEAIKKTYPQQDIIYFADRKSFPYGTKTTDELKTIIEDSVDFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K V+A N + D++++ + G P +K + I+
Sbjct: 61 LKK-GASFIVLASNAPSITVLDKIKNKDNVI---GIYPPLKNVIKD-KKKNTLIIGAKVM 115
Query: 132 LRRTYTSNLIHSYVSQC--HIHLVSSMILASRVEEYAC--GIKIKEDEIKKEIEGCFIEK 187
+ I V HL ++ L +E I+ E+ IK I+ C E+
Sbjct: 116 IDSPELQEYIKKEVGDFYKQFHLENASPLIQLIESGDFINNIEKTENTIKNFIKTC--EE 173
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+ + D I L+ TH P + F+++ P D +DS+ + +
Sbjct: 174 KYGKLDSITLSSTHLPWLSSYFQKIIPE-AKLYDPADSLVKAIKNY 218
>gi|319779418|ref|YP_004130331.1| Glutamate racemase [Taylorella equigenitalis MCE9]
gi|317109442|gb|ADU92188.1| Glutamate racemase [Taylorella equigenitalis MCE9]
Length = 267
Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats.
Identities = 53/250 (21%), Positives = 98/250 (39%), Gaps = 14/250 (5%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
KKL I +FD+GIG + +R P+ IY AD FPY LK +
Sbjct: 5 KKLVKPIAVFDAGIGSYAWARAIREKFPKQDIIYFADRANFPYAWKTKDELKA-CIKGAI 63
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L L V+ N + E++ S+ +G++P I A +++G I L
Sbjct: 64 ECLADMGACLVVVTSNAPSITVVSEIKEEC-SVPVMGSIPPIASGVATSKTGEIINLGVK 122
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEY--ACGIKIKEDEIKKEIEGCFIEK 187
+ S +HLV++ L + VE + +++KK ++ +
Sbjct: 123 ILSSLPEFRFFVESISDDAKVHLVNAEDLVTTVESGQFITEHEKTVEQVKKFMDDVRQKY 182
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD 247
DV L+ TH IV +F++ +P + +++ L +I + +
Sbjct: 183 --PNADVCTLSSTHLTWIVDIFQKAAPD-MQFINP-------VDRTLKKIEPYTSEGSGT 232
Query: 248 HALFLSGKPD 257
+ + +
Sbjct: 233 TLSYATSSEE 242
>gi|111114922|ref|YP_709540.1| glutamate racemase [Borrelia afzelii PKo]
gi|110890196|gb|ABH01364.1| glutamate racemase [Borrelia afzelii PKo]
Length = 261
Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats.
Identities = 48/252 (19%), Positives = 105/252 (41%), Gaps = 18/252 (7%)
Query: 9 EKKLQNSILIFDSGIGGLIVLQKMRFLMPE-YHFIYVADDVGFPYGNWEDHALKKRLMFL 67
K + I++FDSGIGGL + ++ + Y ++YVAD+ FPYG L + ++ L
Sbjct: 1 MKNFKEVIIVFDSGIGGLSYFKYIKSKVGGGYQYVYVADNKNFPYGEKSSEYLLEAVLVL 60
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ Y ++ACNT + ++L FP + L V +I A + +++
Sbjct: 61 IEKLKKIYNISALILACNTISVSVYNKLNFVFPVVYTLPEVSSISDLAL----KRVLLIA 116
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T TL + + ++ + + + ++ L + VE + + + +E E
Sbjct: 117 TNTTLESKFVKDQVNMH---EDLIVKAAGELVNFVEYGKK----YKKDALRCLEALKSEV 169
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP----RINTHQTR 243
+++ L CTHY + + + +N + + + + + + ++
Sbjct: 170 VNTGREIVFLGCTHYLHLKTMIEDFL--KIPVYENRELVVQSLIRSMNFPQYKSDYYENN 227
Query: 244 VFDDHALFLSGK 255
+ +L+
Sbjct: 228 IDFVDEFYLTKN 239
>gi|262066069|ref|ZP_06025681.1| putative glutamate racemase [Fusobacterium periodonticum ATCC
33693]
gi|291380163|gb|EFE87681.1| putative glutamate racemase [Fusobacterium periodonticum ATCC
33693]
Length = 257
Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats.
Identities = 46/250 (18%), Positives = 95/250 (38%), Gaps = 18/250 (7%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ +I +FD+G+G +++ ++ P+ +Y AD FPYG L+ + +
Sbjct: 1 MNKAIAVFDAGLGSYAIVEAIKKAYPQQDILYFADRKSFPYGTKTTEELRDIIENSIDFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+K V+A N + D++++ + G P +K + I+
Sbjct: 61 LEKGAA-FIVLASNAPSITVLDKIKNKDNVI---GIYPPLKDVIKD-KKKNTLIIGAKVM 115
Query: 132 LRRTYTSNLIHSYVSQC--HIHLVSSMILASRVEEYAC--GIKIKEDEIKKEIEGCFIEK 187
+ I V H+ ++ L +E ++ E IK I+ C E
Sbjct: 116 IDSPELQEYIKKEVGDFYKQFHVENASPLIQLIESGDFINNVEETEKIIKNFIDNC--EN 173
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN------THQ 241
+ + D I L+ TH P + F+++ P D SD + + + + +
Sbjct: 174 KFGKLDSITLSSTHLPWLSSYFQKIIPE-AKLYDPSDDLVKAIKNHISEGEGKIHSIISE 232
Query: 242 TRVFDDHALF 251
+ + +
Sbjct: 233 SEKYPANEFL 242
>gi|297162715|gb|ADI12427.1| putative glutamate racemase [Streptomyces bingchenggensis BCW-1]
Length = 274
Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats.
Identities = 52/202 (25%), Positives = 76/202 (37%), Gaps = 11/202 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I + DSGIG L + L P+ + +D P+G + +R
Sbjct: 2 KIALMDSGIGLLPAAAAVHRLRPDADLVLSSDPGSMPWGPRTPEDVTQR-ALACVRAAAA 60
Query: 75 YQPVLSVIACNTAFTLIKDELR-STFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++P ++ACNTA LR P + +G VPAIK AAA G ++I +TPAT
Sbjct: 61 HRPDALIVACNTASVHALSALRAELEPGLPVIGTVPAIKPAAA--GGGPVAIWATPATTG 118
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
Y LI + + V+ LA V+ +
Sbjct: 119 SPYQRRLISDFADGVTVTEVACPGLAEAVQRADSAAIDAAVADAAARTP-------RDIR 171
Query: 194 VIVLACTHYPLIVHVFRQLSPW 215
+VL CTHY L+ R
Sbjct: 172 ALVLGCTHYELVADRIRAAVQP 193
>gi|297562279|ref|YP_003681253.1| glutamate racemase [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
gi|296846727|gb|ADH68747.1| Glutamate racemase [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
Length = 261
Score = 115 bits (287), Expect = 9e-24, Method: Composition-based stats.
Identities = 58/253 (22%), Positives = 89/253 (35%), Gaps = 15/253 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
I + DSGIG L +R P+ D P+G + R + +
Sbjct: 3 IALVDSGIGMLSTAAALRVARPDADLFLSMDPDHMPWGPRTPDEIVARALAGARAAQEAA 62
Query: 76 QP---VLSVIACNTAFTLIKDELR-STFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
V+ CNTA ELR P + +G VPAIK AAA G I++ ST AT
Sbjct: 63 GDAALDAVVVPCNTASVHGLAELRAEFEPDVPVIGTVPAIKPAAAA--GGPIAVWSTAAT 120
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
R Y L+ ++ + V+ LA VE + + + E
Sbjct: 121 TRSGYQRQLVETFARGVEVTAVACAGLAEAVES-------ADPRLIDDAVAYAAELTPGD 173
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
+VL CTHY L+ + + ++A +A + +
Sbjct: 174 VHGVVLGCTHYDLVGAQISAALGGRAELFTAAGAVAAQALRRIGERPV--GTAPGRVRVL 231
Query: 252 LSGKPDIAMRRLM 264
SG+P +
Sbjct: 232 ASGRPSRLPAAAL 244
>gi|312140967|ref|YP_004008303.1| glutamate racemase [Rhodococcus equi 103S]
gi|325675397|ref|ZP_08155081.1| glutamate racemase [Rhodococcus equi ATCC 33707]
gi|311890306|emb|CBH49624.1| putative glutamate racemase [Rhodococcus equi 103S]
gi|325553368|gb|EGD23046.1| glutamate racemase [Rhodococcus equi ATCC 33707]
Length = 255
Score = 115 bits (287), Expect = 9e-24, Method: Composition-based stats.
Identities = 56/240 (23%), Positives = 99/240 (41%), Gaps = 12/240 (5%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ + DSG+G L +R L P+ + D G P+G ++ + R++ +D+
Sbjct: 3 VALIDSGLGLLPTSAWLRRLRPDLDLMLSLDPEGAPWGPRDERWVIDRVVGTARRAVDR- 61
Query: 76 QPVLSVIACNTAFTLIKDELRST-FPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ V+ CNTA + +R+ S+ +G VPAIK AAA ++I +T AT
Sbjct: 62 GAEVVVLPCNTASVTALEHVRADLGDSIPVIGTVPAIKPAAAV--CDSVAIWATAATTAS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y +NL+ + + + V+ LA ++
Sbjct: 120 DYQANLVKEFANGSSVVGVACHGLADAIDLGDVEAARAAIAAAAARTP-------DDVTG 172
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
+VL CTHYPL+ P V D+++++A + + + T + LSG
Sbjct: 173 VVLGCTHYPLVADEIAAHLPDGVALFDSAEAVAAQTLRRIDALGR-DTTGQGTVEVLLSG 231
>gi|294811101|ref|ZP_06769744.1| glutamate racemase [Streptomyces clavuligerus ATCC 27064]
gi|294323700|gb|EFG05343.1| glutamate racemase [Streptomyces clavuligerus ATCC 27064]
Length = 256
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 64/248 (25%), Positives = 100/248 (40%), Gaps = 11/248 (4%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSGIG L +R L P+ + D G P+G + +R + ++ P
Sbjct: 1 MDSGIGLLAAAAAVRGLRPDADLVLSQDPDGMPWGPRTPEGVTER-ALAVARAAAEHAPD 59
Query: 79 LSVIACNTAFTLIKDELRST-FPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
++ACNTA LR+ P++ +G VPAIK AA G I+I +TPAT Y
Sbjct: 60 ALIVACNTATVHALPALRAALEPAIPVIGTVPAIKPAAVA--GGPIAIWATPATTGSPYQ 117
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+LI + + V LA V+ +DE + + T +VL
Sbjct: 118 RDLIGRFAGAVDVAEVPCPGLADAVDH-------ADDEAIDRAVAAAAARTPRDTRAVVL 170
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257
CTHY L+ R PV ++ ++A +A + + LSG+
Sbjct: 171 GCTHYELVAERIRDAIGTPVALHGSAGAVAAQALRRIGAAPAPGATASGTLTVLLSGRAS 230
Query: 258 IAMRRLMQ 265
R ++
Sbjct: 231 ALPDRALR 238
>gi|294785961|ref|ZP_06751248.1| glutamate racemase [Fusobacterium sp. 3_1_27]
gi|294486298|gb|EFG33661.1| glutamate racemase [Fusobacterium sp. 3_1_27]
Length = 256
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 49/226 (21%), Positives = 90/226 (39%), Gaps = 13/226 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ I +FD+G+G +++ +R P+ IY AD FPYG LK + +
Sbjct: 1 MNKPIAVFDAGLGSYAIVEAIRKAYPQQDIIYFADRKSFPYGAKTIEELKTIIEKSVN-F 59
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + V+A N + D++++ +G P ++ + I+
Sbjct: 60 LLEKGASFIVLASNAPSITVLDKIKNNK----VIGIYPPLRDVIND-KKKNTLIIGAKVM 114
Query: 132 LRRTYTSNLIHSY--VSQCHIHLVSSMILASRVEEY--ACGIKIKEDEIKKEIEGCFIEK 187
+ + N I S H+ ++ L +E I+ E IK I+ C E
Sbjct: 115 IESSELQNYIKREVGDSYKQFHVENASSLIQLIESGTFINNIEETEKTIKNFIDNC--EN 172
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+ + D I L+ TH P + F ++ P D +DS+ + +
Sbjct: 173 KFGKLDSITLSSTHLPWLSSYFEKIIPQ-TKLYDPADSLVKAIKPY 217
>gi|260905616|ref|ZP_05913938.1| glutamate racemase [Brevibacterium linens BL2]
Length = 268
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 57/231 (24%), Positives = 95/231 (41%), Gaps = 15/231 (6%)
Query: 29 LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAF 88
+ L P I D PYG+ AL+ R + + +L ++P VIACNTA
Sbjct: 17 ADALFHLAPHADLILAMDPDFTPYGSLSPEALEARALNSAA-VLAAWEPDAIVIACNTAS 75
Query: 89 TLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQ 147
+ +R+ + P + +G VPA+K AA Q +I +TPAT Y NLI ++ ++
Sbjct: 76 VQALETVRARYEPDIPVIGTVPAVKMAAGTGQD--FAIWATPATTGSAYQQNLIDTFAAE 133
Query: 148 CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVH 207
+ V+ LA + I + I ++ + IVL CTHY L+
Sbjct: 134 VAVSPVACPGLAEAI--NEADIATIDSAIDAALDQM-----DPGMETIVLGCTHYGLVAE 186
Query: 208 VFRQLSPWPVDWLDNSDSIARRARCLL----PRINTHQTRVFDDHALFLSG 254
+ D+ +A++ + + Q + A + SG
Sbjct: 187 RIMAARAGAITLFDSPIPVAKQTLRRIGIDAHGVGPGQPDTGEVIATYASG 237
>gi|237739926|ref|ZP_04570407.1| asp/Glu racemase [Fusobacterium sp. 2_1_31]
gi|229423534|gb|EEO38581.1| asp/Glu racemase [Fusobacterium sp. 2_1_31]
Length = 263
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 50/227 (22%), Positives = 94/227 (41%), Gaps = 12/227 (5%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS 69
+K+ +I +FD+G+G +++ ++ P+ IY AD FPYG LK +
Sbjct: 5 EKMNKAIAVFDAGLGSYAIVEAIKKAYPKQDIIYFADRKSFPYGTKTTDELKTIIEDSVD 64
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+L K V+A N + D++++ + G P +K + I+
Sbjct: 65 FLLKK-GASFIVLASNAPSITVLDKIKNKDNVI---GIYPPLKNVIND-KKKNTLIIGAK 119
Query: 130 ATLRRTYTSNLIHSY--VSQCHIHLVSSMILASRVEEYAC--GIKIKEDEIKKEIEGCFI 185
+ I Q H+ ++ L +E I+ E+ IK I+ C
Sbjct: 120 VMIDSFELQEYIKKEVGDFQKQFHVENASPLIQLIESGDFINNIEKTENTIKNFIKTC-- 177
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232
E++ + D I L+ TH P + F+++ P D +DS+ + +
Sbjct: 178 EEKYGKLDSITLSSTHLPWLSSYFQKIIPE-AKLYDPADSLVKAIKN 223
>gi|318059525|ref|ZP_07978248.1| glutamate racemase [Streptomyces sp. SA3_actG]
Length = 260
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 58/224 (25%), Positives = 87/224 (38%), Gaps = 15/224 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I + DSGIG L +R L P+ + +D P+G + RL ++
Sbjct: 2 KIALLDSGIGLLPAAAAVRGLRPDADLVLSSDPASMPWGPRTSEDIT-RLALGAAEAAAA 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+P V+ACNTA T LR+ F +G VPAIK AAA+ ++I +TPAT
Sbjct: 61 LEPDALVVACNTASTHALPALRARFEDTFPVIGTVPAIKPAAAF--GAPVAIWATPATTG 118
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
Y LI + ++ V+ LA V+
Sbjct: 119 SEYQRRLIAEFAPGGNVTAVACPGLADAVQHADEAATEAAIADAAARTP-------AGVR 171
Query: 194 VIVLACTHYPLIVHVFRQLS----PWPVDWLDNSDSIARRARCL 233
V+VL CTHY L+ L ++ ++A +A
Sbjct: 172 VVVLGCTHYELVGARIAAALTRPGGAAPTLLGSAPAVAAQALRR 215
>gi|333022620|ref|ZP_08450684.1| putative glutamate racemase [Streptomyces sp. Tu6071]
gi|332742472|gb|EGJ72913.1| putative glutamate racemase [Streptomyces sp. Tu6071]
Length = 260
Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 59/224 (26%), Positives = 87/224 (38%), Gaps = 15/224 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I + DSGIG L +R L P+ + +D P+G + RL ++
Sbjct: 2 KIALLDSGIGLLPAAAAVRGLRPDADLVLSSDPASMPWGPRTSEDIT-RLALGAAEAAAA 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+P VIACNTA T LR+ F +G VPAIK AAA+ ++I +TPAT
Sbjct: 61 LEPDALVIACNTASTHALPALRARFEDTFPVIGTVPAIKPAAAF--GAPVAIWATPATTG 118
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
Y LI + ++ V+ LA V+
Sbjct: 119 SEYQRRLIAEFAPGGNVTAVACPGLADAVQHADEAATEAAIADAAARTP-------AGVR 171
Query: 194 VIVLACTHYPLIVHVFRQLS----PWPVDWLDNSDSIARRARCL 233
V+VL CTHY L+ L ++ ++A +A
Sbjct: 172 VVVLGCTHYELVGARIAAALTRPGGAAPTLLGSAPAVAAQALRR 215
>gi|302523482|ref|ZP_07275824.1| glutamate racemase [Streptomyces sp. SPB78]
gi|302432377|gb|EFL04193.1| glutamate racemase [Streptomyces sp. SPB78]
Length = 260
Score = 111 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 59/224 (26%), Positives = 88/224 (39%), Gaps = 15/224 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I + DSGIG L +R L P+ + +D P+G + RL ++
Sbjct: 2 KIALLDSGIGLLPAAAAVRGLRPDADLVLSSDPASMPWGPRTSEDIT-RLALGAAEAAAA 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+P V+ACNTA T LR+ F +G VPAIK AAA+ ++I +TPAT
Sbjct: 61 LEPDALVVACNTASTHALPALRARFEDTFPVIGTVPAIKPAAAF--GAPVAIWATPATTG 118
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
Y LI + ++ V+ LA V+
Sbjct: 119 SEYQRRLIAEFAPGGNVTAVACPGLADAVQHADEAATEAAIADAAARTP-------AGVR 171
Query: 194 VIVLACTHYPLIVHVFRQLSPWP----VDWLDNSDSIARRARCL 233
V+VL CTHY L+ P L ++ ++A +A
Sbjct: 172 VVVLGCTHYELVGARIAAALTRPGRAAPTLLGSAPAVAAQALRR 215
>gi|284051284|ref|ZP_06381494.1| glutamate racemase [Arthrospira platensis str. Paraca]
Length = 76
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 34/69 (49%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I IFDSG+GGL VL+++ +P +Y AD PYG + + + + + +
Sbjct: 8 QKIAIFDSGVGGLTVLRELYRQLPNESILYFADTARLPYGTRSPEEIVQFVREIITWAVA 67
Query: 74 KYQPVLSVI 82
+ ++ +
Sbjct: 68 QDVKMVLMA 76
>gi|163838785|ref|YP_001623190.1| glutamate racemase [Renibacterium salmoninarum ATCC 33209]
gi|162952261|gb|ABY21776.1| glutamate racemase [Renibacterium salmoninarum ATCC 33209]
Length = 271
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 39/216 (18%), Positives = 88/216 (40%), Gaps = 6/216 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I +FD+G+G +++ +R P IY AD FPYG L + + L+
Sbjct: 10 PIAVFDAGLGSYDIVRALRNHFPAVDLIYFADRASFPYGAKSASELFEVALRSC-QYLNS 68
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+I N + D + + + LG +P I+ A + + + +L+ A++ +
Sbjct: 69 LGASCVIIGSNAPSVTVLDAVAAQC-AFPVLGVLPPIQVALSSIEPTEVLLLAGAASMTQ 127
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + + V + ++ G + + + F++++ +
Sbjct: 128 SQQLQDFINREAGQQAWRVQTAAATKLIDLVESGQFVADPSGTVALVAEFLDQQRREGQT 187
Query: 195 ---IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
+ L+ TH P + F++ +P + + +DS+A
Sbjct: 188 IGGVTLSSTHLPWLSFAFKEAAP-NLQLFNPADSVA 222
>gi|12055941|emb|CAC21088.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 56/151 (37%), Gaps = 5/151 (3%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA + +E+++T +P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKATLDIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKIQ 60
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++ VE + KK + GK D +VL CTHY
Sbjct: 61 LLAPSVQVRSLACPKFVPIVESNE----MCSSIAKKIVYDSLSPLVGK-IDTLVLGCTHY 115
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
PL+ + + + V +D+ R L
Sbjct: 116 PLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|12055957|emb|CAC21096.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 55/151 (36%), Gaps = 5/151 (3%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA + +E+++ +P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAVLDIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKIQ 60
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++ VE + KK + GK D +VL CTHY
Sbjct: 61 LLAPSVQVRSLACPKFVPIVESNE----MCSSIAKKIVYDSLAPLVGK-IDTLVLGCTHY 115
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
PL+ + + + V +D+ R L
Sbjct: 116 PLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|46404909|gb|AAS93325.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 56/151 (37%), Gaps = 5/151 (3%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA + +E+++ +P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAALDIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKIQ 60
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++ VE + KK + G GK D +VL CTHY
Sbjct: 61 LLAPSVQVRSLACPKFVPIVESNE----MCSSIAKKIVYGSLAPLVGK-IDTLVLGCTHY 115
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
PL+ + + + V +D+ R L
Sbjct: 116 PLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|46404919|gb|AAS93330.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 55/151 (36%), Gaps = 5/151 (3%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA + +E+++ +P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAALDIPVLGVVLPGASAAIKLTTKGQVGVIGTPMTVASDIYRKKIQ 60
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++ VE + KK + GK D +VL CTHY
Sbjct: 61 LLAPSVQVRSLACPKFVPIVESNE----MCSSIAKKIVYDSLAPLVGK-IDTLVLGCTHY 115
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
PL+ + + + V +D+ R L
Sbjct: 116 PLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|12055943|emb|CAC21089.1| glutamate racemase [Streptococcus pyogenes]
gi|12055947|emb|CAC21091.1| glutamate racemase [Streptococcus pyogenes]
gi|12055953|emb|CAC21094.1| glutamate racemase [Streptococcus pyogenes]
gi|12055969|emb|CAC21108.1| glutamate racemase [Streptococcus pyogenes]
gi|14475675|gb|AAK62687.1| putative glutamate racemase [Streptococcus dysgalactiae subsp.
equisimilis]
gi|33521547|gb|AAQ20061.1| glutamate racemase [Streptococcus pyogenes]
gi|33521551|gb|AAQ20063.1| glutamate racemase [Streptococcus pyogenes]
gi|33521557|gb|AAQ20066.1| glutamate racemase [Streptococcus pyogenes]
gi|46404925|gb|AAS93333.1| glutamate racemase [Streptococcus pyogenes]
gi|115394071|gb|ABI97005.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 55/151 (36%), Gaps = 5/151 (3%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA + +E+++ +P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAALDIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKIQ 60
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++ VE + KK + GK D +VL CTHY
Sbjct: 61 LLAPSVQVRSLACPKFVPIVESNE----MCSSIAKKIVYDSLAPLVGK-IDTLVLGCTHY 115
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
PL+ + + + V +D+ R L
Sbjct: 116 PLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|12055945|emb|CAC21090.1| glutamate racemase [Streptococcus pyogenes]
gi|12055959|emb|CAC21097.1| glutamate racemase [Streptococcus pyogenes]
gi|12055971|emb|CAC21109.1| glutamate racemase [Streptococcus pyogenes]
gi|46404913|gb|AAS93327.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 55/151 (36%), Gaps = 5/151 (3%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA + +E+++ +P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAALDIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKIQ 60
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++ VE + KK + GK D +VL CTHY
Sbjct: 61 LLAPSVQVRSLACPKFVPIVESNE----MCSSIAKKIVYDSLSPLVGK-IDTLVLGCTHY 115
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
PL+ + + + V +D+ R L
Sbjct: 116 PLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|33521545|gb|AAQ20060.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 54/151 (35%), Gaps = 5/151 (3%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA + +E+++ +P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAALDIPVLGVVLPGASAAIKLTTKGQVGVIGTPMTVASDIYRKKIQ 60
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++ VE I + + + + D +VL CTHY
Sbjct: 61 LLAPSIQVRSLACPKFVPIVESNEMCSSIAKKIVYDSLAPLVGK-----IDTLVLGCTHY 115
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
PL+ + + + V +D+ R L
Sbjct: 116 PLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|33521553|gb|AAQ20064.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 56/151 (37%), Gaps = 5/151 (3%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA + +E+++ +P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAALDIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKIQ 60
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++ VE + KK + + GK D +VL CTHY
Sbjct: 61 LLAPSVQVRSLACPKFVPIVESNE----MCSSIAKKIVYDSLVPLVGK-IDTLVLGCTHY 115
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
PL+ + + + V +D+ R L
Sbjct: 116 PLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|46404917|gb|AAS93329.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 55/151 (36%), Gaps = 5/151 (3%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA + +E+++ +P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAALDIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKIQ 60
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++ VE + KK + GK D +VL CTHY
Sbjct: 61 LLAPSVQVRSLACPRFVPIVESNE----MCSSIAKKIVYDSLAPLVGK-IDTLVLGCTHY 115
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
PL+ + + + V +D+ R L
Sbjct: 116 PLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|46404915|gb|AAS93328.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 55/151 (36%), Gaps = 5/151 (3%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA + +E+++ +P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAALDIPVLGVILPGASAAIKSTTKGQVGVIGTPMTVTSDIYRKKIQ 60
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++ VE + KK + GK D +VL CTHY
Sbjct: 61 LLAPSVQVRSLACPKFVPIVESNE----MCSSIAKKIVYDSLSPLVGK-IDTLVLGCTHY 115
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
PL+ + + + V +D+ R L
Sbjct: 116 PLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|12055937|emb|CAC21086.1| glutamate racemase [Streptococcus pyogenes]
gi|12055955|emb|CAC21095.1| glutamate racemase [Streptococcus pyogenes]
gi|12055973|emb|CAC21110.1| glutamate racemase [Streptococcus pyogenes]
gi|46404903|gb|AAS93322.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 55/151 (36%), Gaps = 5/151 (3%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA + +E+++ +P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAALDIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKIQ 60
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++ VE + KK + GK D +VL CTHY
Sbjct: 61 LLAPSIQVRSLACPKFVPIVESNE----MCSSIAKKIVYDSLSPLVGK-IDTLVLGCTHY 115
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
PL+ + + + V +D+ R L
Sbjct: 116 PLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|12055935|emb|CAC21085.1| glutamate racemase [Streptococcus pyogenes]
gi|12055939|emb|CAC21087.1| glutamate racemase [Streptococcus pyogenes]
gi|12055949|emb|CAC21092.1| glutamate racemase [Streptococcus pyogenes]
gi|12055967|emb|CAC21107.1| glutamate racemase [Streptococcus pyogenes]
gi|14475673|gb|AAK62686.1| putative glutamate racemase [Streptococcus dysgalactiae subsp.
equisimilis]
gi|14475679|gb|AAK62689.1| putative glutamate racemase [Streptococcus dysgalactiae subsp.
equisimilis]
gi|46404931|gb|AAS93336.1| glutamate racemase [Streptococcus pyogenes]
gi|46404933|gb|AAS93337.1| glutamate racemase [Streptococcus pyogenes]
gi|115394063|gb|ABI97001.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 54/151 (35%), Gaps = 5/151 (3%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA + +E+++ +P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAALDIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKIQ 60
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++ VE I + + + + D +VL CTHY
Sbjct: 61 LLAPSIQVRSLACPKFVPIVESNEMCSSIAKKIVYDSLAPLVGK-----IDTLVLGCTHY 115
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
PL+ + + + V +D+ R L
Sbjct: 116 PLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|33521555|gb|AAQ20065.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 55/151 (36%), Gaps = 5/151 (3%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA + +E+++ +P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAVLDIPVLGVILPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKIQ 60
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++ VE + KK + GK D +VL CTHY
Sbjct: 61 LLAPSIQVRSLACPKFVPIVESNE----MCSSIAKKIVYDSLSPLVGK-IDTLVLGCTHY 115
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
PL+ + + + V +D+ R L
Sbjct: 116 PLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|12055933|emb|CAC21084.1| glutamate racemase [Streptococcus pyogenes]
gi|12055963|emb|CAC21101.1| glutamate racemase [Streptococcus pyogenes]
gi|12055975|emb|CAC21111.1| glutamate racemase [Streptococcus pyogenes]
gi|46404921|gb|AAS93331.1| glutamate racemase [Streptococcus pyogenes]
gi|46404927|gb|AAS93334.1| glutamate racemase [Streptococcus pyogenes]
gi|115394065|gb|ABI97002.1| glutamate racemase [Streptococcus pyogenes]
gi|115394067|gb|ABI97003.1| glutamate racemase [Streptococcus pyogenes]
gi|115394069|gb|ABI97004.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 55/151 (36%), Gaps = 5/151 (3%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA + +E+++ +P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAALDIPVLGVILPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKIQ 60
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++ VE + KK + GK D +VL CTHY
Sbjct: 61 LLAPSVQVRSLACPKFVPIVESNE----MCSSIAKKIVYDSLSPLVGK-IDTLVLGCTHY 115
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
PL+ + + + V +D+ R L
Sbjct: 116 PLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|12055961|emb|CAC21098.1| glutamate racemase [Streptococcus pyogenes]
gi|33521549|gb|AAQ20062.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 54/151 (35%), Gaps = 5/151 (3%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA + +E+++ +P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAALDIPVLGVILPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKIQ 60
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++ VE I + + + + D +VL CTHY
Sbjct: 61 LLAPSVQVRSLACPKFVPIVESNEMCSSIAKKIVYDSLAPLVGK-----IDTLVLGCTHY 115
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
PL+ + + + V +D+ R L
Sbjct: 116 PLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|12055979|emb|CAC21113.1| glutamate racemase [Streptococcus pyogenes]
gi|14475677|gb|AAK62688.1| putative glutamate racemase [Streptococcus dysgalactiae subsp.
equisimilis]
Length = 146
Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 54/151 (35%), Gaps = 5/151 (3%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA + +E+++ +P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAALDIPVLGVILPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKIQ 60
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++ VE I + + + + D +VL CTHY
Sbjct: 61 LLAPSIQVRSLACPKFVPIVESNEMCSSIAKKIVYDSLAPLVGK-----IDTLVLGCTHY 115
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
PL+ + + + V +D+ R L
Sbjct: 116 PLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|12055977|emb|CAC21112.1| glutamate racemase [Streptococcus pyogenes]
gi|46404923|gb|AAS93332.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 108 bits (271), Expect = 6e-22, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 55/151 (36%), Gaps = 5/151 (3%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA + +E+++ +P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAALDIPVLGVILPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKIQ 60
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++ VE + KK + GK D +VL CTHY
Sbjct: 61 LLAPSIQVRSLACPKFVPIVESNE----MCSSIAKKIVYDSLSPLVGK-IDTLVLGCTHY 115
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
PL+ + + + V +D+ R L
Sbjct: 116 PLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|312796622|ref|YP_004029544.1| glutamate racemase [Burkholderia rhizoxinica HKI 454]
gi|312168397|emb|CBW75400.1| Glutamate racemase (EC 5.1.1.3) [Burkholderia rhizoxinica HKI 454]
Length = 202
Score = 108 bits (271), Expect = 6e-22, Method: Composition-based stats.
Identities = 40/187 (21%), Positives = 69/187 (36%), Gaps = 16/187 (8%)
Query: 95 LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVS 154
LR P M +G P IK AA +++ + +L+T +TL+ + L+ Y C +
Sbjct: 2 LRERLP-MPIIGVEPGIKPAALQSRTRVAGVLATASTLKSARFNALLAQYGGDCRFVCQA 60
Query: 155 SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214
L +E G + + + C D++VL CTHYP ++ R ++
Sbjct: 61 GHGLVDAIEAGDIG----SPVVMQRLAACLQPILDASADILVLGCTHYPFLLDAVRTITA 116
Query: 215 WPVDWLDNSDSIARRARCLLPRINTH-----------QTRVFDDHALFLSGKPDIAMRRL 263
+ +D ++IAR+ L T L +G R
Sbjct: 117 DRLHVIDTGEAIARQLVRRLTDQQLRVDTGPAAAHAEPTSAPAPLRLVTTGDAPQLARIA 176
Query: 264 MQGFGLK 270
Q +
Sbjct: 177 RQLLSVN 183
>gi|46404905|gb|AAS93323.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 55/151 (36%), Gaps = 5/151 (3%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA + +E+++ +P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAALDIPVLGVVLPGASAATKSTTKGQVGVIGTPMTVASDIYRKKIQ 60
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++ VE + KK + GK D +VL CTHY
Sbjct: 61 LLAPSIQVRSLACPKFVPIVESNE----MCSSIAKKIVYDSLSPLVGK-IDTLVLGCTHY 115
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
PL+ + + + V +D+ R L
Sbjct: 116 PLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|46404929|gb|AAS93335.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 55/151 (36%), Gaps = 5/151 (3%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA + +E+++ +P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAALDIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKIQ 60
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++ VE + KK + GK D +VL CTHY
Sbjct: 61 LLAPSVQVRSLACPKFVPIVESNE----MCSSIAKKIVYDSLSPLVGK-IDTLVLGCTHY 115
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
PL+ + + + V +D+ R L
Sbjct: 116 PLLRPIIQNVMGSSVKLIDSGAECVRDISVL 146
>gi|46404911|gb|AAS93326.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 55/151 (36%), Gaps = 5/151 (3%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA + +E+++ +P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAALDIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKIQ 60
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++ VE + KK + GK D +VL CTHY
Sbjct: 61 LLAPSVQVRSLACPKFVPIVESNE----MCSSIAKKIVYDSLSPLVGK-IDTLVLGCTHY 115
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
PL+ + + + V +D+ R L
Sbjct: 116 PLLRPIIQNVMGRSVKLIDSGAECVRDISVL 146
>gi|29827966|ref|NP_822600.1| glutamate racemase [Streptomyces avermitilis MA-4680]
gi|29605067|dbj|BAC69135.1| putative glutamate racemase [Streptomyces avermitilis MA-4680]
Length = 261
Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats.
Identities = 61/255 (23%), Positives = 98/255 (38%), Gaps = 15/255 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I + DSGIG L +R L P+ + +D P+G + +R + +
Sbjct: 2 KIALLDSGIGLLAAAAAVRRLRPDADLVLSSDPASVPWGPRTPQDVTERSLAVAE-AAAA 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++P + ACNT LR+ F P + +G VPAIK AAA G ++I +TPAT
Sbjct: 61 HRPDALIAACNTMSVHALPALRARFEPGLPVIGTVPAIKPAAAS--GGPVAIWATPATTG 118
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
Y LI + + V LA VE E
Sbjct: 119 SPYQRGLIREFADGVAVTEVPCPGLADAVEHANEAAIDAAIAAAAERTP-------DDVR 171
Query: 194 VIVLACTHYPLIVHVFRQLSP----WPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
V+VL CTHY L+ R P+ ++ ++A +A + + + +
Sbjct: 172 VVVLGCTHYELVAERIRAAVQKPGLPPLVLHGSAGAVAAQALRRIGELPAPEAPMGASLT 231
Query: 250 LFLSGKPDIAMRRLM 264
+ L G+ + +
Sbjct: 232 VLLGGREETLPAPAL 246
>gi|46404907|gb|AAS93324.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 55/151 (36%), Gaps = 5/151 (3%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA + +E+++ +P A T G + I+ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAALDIPVLGVVLPGASAAIKSTTKGQVGIIGTPMTVASDIYRKKIQ 60
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++ VE + KK + GK D +VL CTHY
Sbjct: 61 LLAPSVQVRSLACPKFVPIVESNE----MCSSIAKKIVYDSLSPLVGK-IDTLVLGCTHY 115
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
PL+ + + + V +D+ R L
Sbjct: 116 PLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|12055965|emb|CAC21103.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 54/151 (35%), Gaps = 5/151 (3%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA + +E+++ +P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAALDIPVLGVILPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKIQ 60
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++ VE I + + + + D +VL CTHY
Sbjct: 61 LLAPSVQVRSLACPKFVPIVESNEMCSSIAKKIVYDSLSSLVGK-----IDTLVLGCTHY 115
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
PL+ + + + V +D+ R L
Sbjct: 116 PLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|12055951|emb|CAC21093.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 55/151 (36%), Gaps = 5/151 (3%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA + +E+++ +P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAALDIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKIQ 60
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++ VE + KK + GK D +VL CTHY
Sbjct: 61 LLAPSIQVRSLACPKFVPIVESNE----MCSSIAKKIVYDSLAPLVGK-IDTLVLGCTHY 115
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
PL+ + + + V +D+ R L
Sbjct: 116 PLLRSIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|198385967|gb|ACH86246.1| glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis]
gi|209486171|gb|ACI48541.1| glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis]
Length = 146
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 55/151 (36%), Gaps = 5/151 (3%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA + +E++ +P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKEALDIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIYRQKIQ 60
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++ VE I+ KK + GK D +VL CTHY
Sbjct: 61 LLAPTVEVTSLACPKFVPIVESNE----IRSSVAKKVVYESLTPLVGK-IDTLVLGCTHY 115
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
PL+ + + + V +D+ R L
Sbjct: 116 PLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|14475687|gb|AAK62693.1| putative glutamate racemase [Streptococcus dysgalactiae subsp.
equisimilis]
Length = 146
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 55/151 (36%), Gaps = 5/151 (3%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA + +E++ +P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKEALDIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIYRQKIQ 60
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++ VE I+ KK + GK D +VL CTHY
Sbjct: 61 LLAPTVEVVSLACPKFVPIVESNE----IRSSVAKKVVYESLTPLVGK-IDTLVLGCTHY 115
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
PL+ + + + V +D+ R L
Sbjct: 116 PLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|198385963|gb|ACH86244.1| glutamate racemase [Streptococcus canis]
gi|198385965|gb|ACH86245.1| glutamate racemase [Streptococcus canis]
gi|209486169|gb|ACI48540.1| glutamate racemase [Streptococcus canis]
Length = 146
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 31/151 (20%), Positives = 56/151 (37%), Gaps = 5/151 (3%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA + +E+++ +P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAVLDIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTITSDIYRQKIQ 60
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++ A VE + + + K + + D +VL CTHY
Sbjct: 61 LLAPSVTVTSLACPKFAPIVESNEIHSSVAKKVVYKSLAPLVGK-----VDTLVLGCTHY 115
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
PL+ + + + V +D+ R L
Sbjct: 116 PLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|14475685|gb|AAK62692.1| putative glutamate racemase [Streptococcus dysgalactiae subsp.
equisimilis]
gi|198385961|gb|ACH86243.1| glutamate racemase [Streptococcus dysgalactiae subsp. equisimilis]
Length = 146
Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 55/151 (36%), Gaps = 5/151 (3%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA + +E++ +P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKEALDIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIYRQKIQ 60
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++ VE I+ KK + GK D +VL CTHY
Sbjct: 61 LLAPTVEVISLACPKFVPIVESNE----IRSSVAKKVVYESLTPLVGK-IDTLVLGCTHY 115
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
PL+ + + + V +D+ R L
Sbjct: 116 PLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|320012326|gb|ADW07176.1| Glutamate racemase [Streptomyces flavogriseus ATCC 33331]
Length = 279
Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 60/247 (24%), Positives = 93/247 (37%), Gaps = 17/247 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I + DSGIG L +R L P+ + +D P+G + +R +
Sbjct: 18 KIALMDSGIGLLAAAAAVRRLRPDADLVLSSDPGSMPWGPRTPEDVTRR-ALAVAQAAAA 76
Query: 75 YQPVLSVIACNTAFTLIKDELR-STFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++P ++ACNTA LR P + +G VPAIK AAA G +I +TPAT
Sbjct: 77 HRPDALIVACNTASVHALPTLRAELEPGLPVIGTVPAIKPAAA--GGGPFAIWATPATTG 134
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
Y LI+ + + V LA VE + +
Sbjct: 135 SPYQRGLINDFARAVDVTEVPCPGLADAVEHADEQGIDRAVAAAAALTP-------PDVT 187
Query: 194 VIVLACTHYPLIVHVFRQLS----PWPVDWL--DNSDSIARRARCLLPRINTHQTRVFDD 247
+VL CTHY L+ R P + ++D++A +A +
Sbjct: 188 DVVLGCTHYELVAERIRAAVERDRPGRAPLVLHGSADAVAAQALRRVGAAPAPSAEPTGA 247
Query: 248 HALFLSG 254
+ L+G
Sbjct: 248 LTVLLAG 254
>gi|198250339|gb|ACH85186.1| glutamate racemase [Streptococcus canis]
Length = 146
Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 31/151 (20%), Positives = 56/151 (37%), Gaps = 5/151 (3%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA + +E+++ +P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAALDIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTITSDIYRQKIQ 60
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++ A VE + + + K + + D +VL CTHY
Sbjct: 61 LLAPSVTVTSLACPKFAPIVESNEIHSSVAKKVVYKSLAPLVGK-----VDTLVLGCTHY 115
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
PL+ + + + V +D+ R L
Sbjct: 116 PLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|14475681|gb|AAK62690.1| putative glutamate racemase [Streptococcus dysgalactiae subsp.
equisimilis]
gi|14475683|gb|AAK62691.1| putative glutamate racemase [Streptococcus dysgalactiae subsp.
equisimilis]
gi|14475691|gb|AAK62695.1| putative glutamate racemase [Streptococcus dysgalactiae subsp.
equisimilis]
Length = 146
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 55/151 (36%), Gaps = 5/151 (3%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA + +E++ +P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKEALDIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIYRQKIQ 60
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++ VE I+ KK + GK D +VL CTHY
Sbjct: 61 LLAPTVEVASLACPKFVPIVESNE----IRSSVAKKVVYESLTPLVGK-IDTLVLGCTHY 115
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
PL+ + + + V +D+ R L
Sbjct: 116 PLLRPIIQNVMGPSVKLIDSGAECVRDISVL 146
>gi|91200741|emb|CAJ73793.1| hypothetical protein kuste3038 [Candidatus Kuenenia
stuttgartiensis]
Length = 916
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 55/288 (19%), Positives = 101/288 (35%), Gaps = 52/288 (18%)
Query: 1 MKIDNYPCEKKLQNS----ILIFDSGIGGLIVLQKMRFLMP--EYHFIYVADDVGFPYGN 54
M+ N P +KK+++ I IFDSG GG+IV +K+ ++P + D FP+G
Sbjct: 542 MEAKNAP-QKKMKDKKPLIIGIFDSGQGGIIVTEKLNRILPVGNIKLLLFTDKANFPFGQ 600
Query: 55 WEDHALKKRLM----FLFSDILDKYQPV----------------------------LSVI 82
+ + +Q +
Sbjct: 601 KSKEEINDITFRAVHEINERCKTMHQSNGFFYRFIYNTPYFLKTVFIWLGIIPRDVIVCF 660
Query: 83 ACNTA-FTLIKDELRSTFPSMAFL-GAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNL 140
ACNT + +LR FP + F+ + + A + I I+ T T++
Sbjct: 661 ACNTVDTMVNHKKLRIRFPHIQFIGPVKKTLLKINALPKDARIGIIGTVGTIKSGIYEKR 720
Query: 141 IHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC-------FIEKEGKRT- 192
I H+ + +LA E E++ K+ + E K T
Sbjct: 721 IREAG--YHVLAKPTPLLAVLSEMLYKKSFDTEEKQKEFYKTARDLIYVNLKEFIKKNTI 778
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ LACTHY + + L V+++ +++ + ++ +I
Sbjct: 779 SHLCLACTHYDYLKSTLKDLFGE-VEFISTVETVIEEVQDIINQIPLQ 825
>gi|254304280|ref|ZP_04971638.1| glutamate racemase [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
gi|148324472|gb|EDK89722.1| glutamate racemase [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
Length = 257
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 50/228 (21%), Positives = 89/228 (39%), Gaps = 12/228 (5%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDI 71
+ N I +FD+G+G +++ ++ P+ IY AD FPYG LK + +
Sbjct: 1 MNNPIAVFDAGLGSYAIVEAIKKAYPQQDIIYFADRRSFPYGAKTTEELKNIIENSIDFL 60
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L K ++A N + D+ +G P +K + I+
Sbjct: 61 LKK-GASFIILASNAPSITVLDK---IKKKDKVIGIYPPLKDVIND-KKKNTLIIGAKVM 115
Query: 132 LRRTYTSNLIHSYVSQC--HIHLVSSMILASRVEEYACGIKIKEDE--IKKEIEGCFIEK 187
+ I V H+ ++ L +E ++E E IK I+ C E
Sbjct: 116 IDSPELQEYIKKEVGDFYKQFHVENASPLIQLIESGDFINNVEETEKTIKNFIDNC--EN 173
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLP 235
+ + D I L+ TH P + F+++ P D +DS+ + R +
Sbjct: 174 KFGKLDSITLSSTHLPWLSSYFKKIIPQ-AKLYDPADSLVKAIRPYIT 220
>gi|46404935|gb|AAS93338.1| glutamate racemase [Streptococcus pyogenes]
Length = 146
Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 56/151 (37%), Gaps = 5/151 (3%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA + +E+++ +P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKAALDIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKIQ 60
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++ VE + KK + GK D +VL CTHY
Sbjct: 61 LLAPSVQVRSLACPKFVPIVESNE----MCSSIAKKIVYDSLAPLVGK-IDTLVLGCTHY 115
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
PL+ + + ++ V +D+ R L
Sbjct: 116 PLLRPIIQNVTGPSVKLIDSGAECVRDISVL 146
>gi|14475689|gb|AAK62694.1| putative glutamate racemase [Streptococcus dysgalactiae subsp.
equisimilis]
Length = 146
Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 33/149 (22%), Positives = 54/149 (36%), Gaps = 5/149 (3%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA + +E++ +P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKEALDIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIYRQKIQ 60
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++ VE I+ KK + GK D +VL CTHY
Sbjct: 61 LLAPTVEVASLACPKFVPIVESNE----IRSSVAKKVVYESLTPLVGK-IDTLVLGCTHY 115
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
PL+ + + + V +D+ R
Sbjct: 116 PLLRPIIQNVMGPSVKLIDSGAECVRDIS 144
>gi|14475695|gb|AAK62697.1| putative glutamate racemase [Streptococcus dysgalactiae subsp.
equisimilis]
Length = 146
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 55/151 (36%), Gaps = 5/151 (3%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA + +E++ +P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKEALDIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIYRQKIQ 60
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++ VE I+ KK + GK D +VL CTHY
Sbjct: 61 LLAPTVEVASLACPKFVPIVESNE----IRSSVAKKVVYESLTPLVGK-IDTLVLGCTHY 115
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
PL+ + + + V +D+ R L
Sbjct: 116 PLLRPIIQNVMGPSVKLIDSGAECVRDMSVL 146
>gi|254385389|ref|ZP_05000717.1| glutamate racemase [Streptomyces sp. Mg1]
gi|194344262|gb|EDX25228.1| glutamate racemase [Streptomyces sp. Mg1]
Length = 263
Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 64/256 (25%), Positives = 99/256 (38%), Gaps = 16/256 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I + DSGIG L MR L P+ + +D G P+G L +R +
Sbjct: 2 KIALMDSGIGLLAAAAAMRRLRPDADLVISSDPDGMPWGPRTPADLTER-AVAVARAAAA 60
Query: 75 YQPVLSVIACNTAFTLIKDELR-STFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++P ++ACNTA LR P++ +G VPAIK AAA G ++I +TPAT
Sbjct: 61 HRPDALIVACNTASVHSLPNLRAELEPAIPVIGTVPAIKPAAAA--GGRVAIWATPATTG 118
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
Y LI + + + V LA VE ++ +
Sbjct: 119 SPYQRGLIRDFAAGVRVTEVPCPGLADAVEHGNEEEVVRAVAAAAALTP-------PDVT 171
Query: 194 VIVLACTHYPLIVHVFRQLS-----PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDH 248
+VL CTHY L+ V R + +++ +A +A +
Sbjct: 172 DVVLGCTHYELVDEVIRAALAERTGGAEPVFHGSAEPVAVQALRRIGARPEPGLPRTGGL 231
Query: 249 ALFLSGKPDIAMRRLM 264
+ LSG+P +
Sbjct: 232 TVLLSGRPSQLPATAL 247
>gi|332755092|gb|EGJ85457.1| asp/Glu/Hydantoin racemase family protein [Shigella flexneri
4343-70]
Length = 230
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 44/218 (20%), Positives = 83/218 (38%), Gaps = 8/218 (3%)
Query: 49 GFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS---MAFL 105
PYGN + + + L L +ACNT + ++ E S + L
Sbjct: 2 NAPYGNRSADDIISLTKKMLT-FLQSRNVKLVAVACNTISSTLESEEYSGYAKSFPFPIL 60
Query: 106 GAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEY 165
+ + Q + I++T T++ LI S ++ S LA +EE
Sbjct: 61 SIIEPAVEDVIRQQYKNVGIIATEFTIKTGCHKELIKKLNSTINVFGEPSKNLAMLIEEG 120
Query: 166 ACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDS 225
++IKK + + I+L CTHYP++ + F ++P + +++ +
Sbjct: 121 NLNAPAILNDIKKHVNHLIS---LHPVNEIILGCTHYPIVQNFFEAVAPD-IKFINPAHD 176
Query: 226 IARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRL 263
A + L ++N + + SG +I L
Sbjct: 177 QAISIKNHLGQLNLLNSSNIGTLQINTSGSMEIYKTVL 214
>gi|110806389|ref|YP_689909.1| hypothetical protein SFV_2500 [Shigella flexneri 5 str. 8401]
gi|110615937|gb|ABF04604.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
Length = 230
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 44/218 (20%), Positives = 82/218 (37%), Gaps = 8/218 (3%)
Query: 49 GFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPS---MAFL 105
PYGN + + + L L +ACNT + ++ E S + L
Sbjct: 2 NAPYGNRSADDIISLTKKMLT-FLQSRNVKLVAVACNTISSTLESEEYSGYAKSFPFPIL 60
Query: 106 GAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEY 165
+ + Q + I++T T++ LI S ++ S LA +EE
Sbjct: 61 SIIEPAVEDVIRQQYKNVGIIATEFTIKTGCHKELIKKLNSTINVFGEPSKNLAMLIEEG 120
Query: 166 ACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDS 225
+ IKK + + I+L CTHYP++ + F ++P + +++ +
Sbjct: 121 NLNAPAILNNIKKHVNHLIS---LHPVNEIILGCTHYPIVQNFFEAVAPD-IKFINPAHD 176
Query: 226 IARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRL 263
A + L ++N + + SG +I L
Sbjct: 177 QAISIKNHLGQLNLLNSSNIGTLQINTSGSMEIYKTVL 214
>gi|46205905|ref|ZP_00210084.1| COG0796: Glutamate racemase [Magnetospirillum magnetotacticum MS-1]
Length = 132
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 38/118 (32%), Gaps = 6/118 (5%)
Query: 153 VSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQL 212
+ VE+ E+ + + D +VL CTHYPL+ +
Sbjct: 10 QACPEFVPLVEQGVTSG----PEVLEVAHRYLDPVKAAGVDTLVLGCTHYPLLTGAISYV 65
Query: 213 SPWPVDWLDNSDSIARRARCLLPRINTHQTR--VFDDHALFLSGKPDIAMRRLMQGFG 268
V + +++ A+ L + ++R H +G + + G
Sbjct: 66 MGDEVTLVSSAEETAKDVYRTLVAHDLERSRDAGPPRHRFLATGSAEPFEHLARRFLG 123
>gi|14475693|gb|AAK62696.1| putative glutamate racemase [Streptococcus dysgalactiae subsp.
equisimilis]
Length = 146
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 54/151 (35%), Gaps = 5/151 (3%)
Query: 83 ACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIH 142
ACNTA + +E++ +P A T G + ++ TP T+ I
Sbjct: 1 ACNTATAVAWEEVKEALDIPVLGVILPGSSAAIKSTTKGQVGVIGTPMTIASDIYRQKIQ 60
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++ VE I+ KK + GK D +VL CTHY
Sbjct: 61 LLAPTVEVASLACPKFVPIVESNE----IRSSVAKKVVYESLTPLVGK-IDTLVLGCTHY 115
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
PL+ + + + V +D R L
Sbjct: 116 PLLRPIIQNVMGPSVKLIDRGAECVRDLSVL 146
>gi|153820612|ref|ZP_01973279.1| glutamate racemase [Vibrio cholerae NCTC 8457]
gi|126508845|gb|EAZ71439.1| glutamate racemase [Vibrio cholerae NCTC 8457]
Length = 176
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 9/150 (6%)
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I +++TPAT++R YT LI + + ++ L+ S L + EE G + +E+ ++
Sbjct: 25 IGLIATPATVKRQYTQELIRDFSANKNVELLGSTRLVNMAEEKLRGKPLDLEELASILQP 84
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
DV VL CTH+PLI +Q+ V +D+ +IARR + LL
Sbjct: 85 -----LKNTIDVAVLGCTHFPLIKEEIQQVLGEQVQLIDSGLAIARRVQELLGIE--QAV 137
Query: 243 RVFDDHALFLSGKP--DIAMRRLMQGFGLK 270
H ++ S P + A+ ++ G
Sbjct: 138 GAKQKHRIYASAPPWEESALNIKLEQLGFN 167
>gi|182440359|ref|YP_001828078.1| putative glutamate racemase [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178468875|dbj|BAG23395.1| putative glutamate racemase [Streptomyces griseus subsp. griseus
NBRC 13350]
Length = 261
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 58/249 (23%), Positives = 94/249 (37%), Gaps = 15/249 (6%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I + DSGIG L +R L P+ + +D P+G + L +
Sbjct: 2 KIALMDSGIGLLAAAAAVRRLRPDAELVLSSDPGSMPWGPRTPEDITA-LALDVARAAAA 60
Query: 75 YQPVLSVIACNTAFTLIKDELR-STFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
++P ++ACNTA LR P++ +G VPAIK AAA G ++I +TPAT
Sbjct: 61 HRPDALIVACNTASVHALPALRAELEPALPVIGTVPAIKPAAA--GGGSVAIWATPATTG 118
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
Y LI + + V LA +E + + +
Sbjct: 119 SPYQRGLIGDFGGTAEVTEVPCPGLADALEHGDEAGIDRAVAAAAALTP-------RDVR 171
Query: 194 VIVLACTHYPLIVHVFRQLS----PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+VL CTHY L+ R P+ ++ ++A +A +
Sbjct: 172 AVVLGCTHYELVAARIRDAVQRPDGPPLALHGSAGAVAAQALRRIGADPAPGAEPSAGLT 231
Query: 250 LFLSGKPDI 258
+ +G+P
Sbjct: 232 VLQAGRPAA 240
>gi|296137849|ref|YP_003645092.1| glutamate racemase [Tsukamurella paurometabola DSM 20162]
gi|296025983|gb|ADG76753.1| Glutamate racemase [Tsukamurella paurometabola DSM 20162]
Length = 265
Score = 101 bits (253), Expect = 7e-20, Method: Composition-based stats.
Identities = 49/246 (19%), Positives = 90/246 (36%), Gaps = 15/246 (6%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKY 75
+ + DSG G + + L P+ + D PYG + + ++ + +Y
Sbjct: 3 VAVIDSGFGMVNYADALSRLRPDTELVLARDPDNMPYGLLPPERISECIVAMAGA-AARY 61
Query: 76 QPVLSVIACNTAFTLIKDELRSTF-PSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRR 134
+ V+ACNT + R+ F P++ +G VPAI+ A A + + A
Sbjct: 62 RVDAIVVACNTGSMYALEAARARFEPAVPVIGVVPAIRPAGATGRPFAVWAT--AAATVS 119
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
Y ++LI ++ H + LA ++ + +
Sbjct: 120 DYQTSLIDAFADPSLAHRIPCYGLAEAIDSGDLDRVADAVAAAADATP-------PDIES 172
Query: 195 IVLACTHYPLIVHVFRQLS----PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
+VL CTHY L+ + D+ + +AR+ L R+ A+
Sbjct: 173 VVLGCTHYGLVREQIVAALRARTGVDLTVFDSPEPVARQVLRRLGVDPGGPQRLGAVVAV 232
Query: 251 FLSGKP 256
SG+P
Sbjct: 233 LESGRP 238
>gi|255532930|ref|YP_003093302.1| Asp/Glu/hydantoin racemase [Pedobacter heparinus DSM 2366]
gi|255345914|gb|ACU05240.1| Asp/Glu/hydantoin racemase [Pedobacter heparinus DSM 2366]
Length = 508
Score = 101 bits (253), Expect = 8e-20, Method: Composition-based stats.
Identities = 62/366 (16%), Positives = 102/366 (27%), Gaps = 127/366 (34%)
Query: 15 SILIFDSGIGGLIVLQKMRF--------------LMPE---YHFIYVADDVGFPYGN--- 54
I +FDSG GGL +L + +P+ FIY+AD PYGN
Sbjct: 59 PIGVFDSGTGGLTILNTLVQFDQHNNATKFAGKDNIPDFAKEKFIYLADQANMPYGNYYS 118
Query: 55 --WED---HALKKRLMFLFSDILD-----------KYQPVLSVIACNTAFTLIKDELRST 98
D + K FL SD K + VIACNTA K+ +
Sbjct: 119 EKKNDLLVEHIIKDAQFLLSDKYYLNNTTKNYSSDKQKVKAIVIACNTATAYGKEYIEDF 178
Query: 99 FPSMAFLGAVPAIKQAAAYT--------QSGLISILSTPATLRRTYTSNLIHS------Y 144
+ V + A A ++G I + +T T+ N I + Y
Sbjct: 179 IKTTGINLKVIGVIDAGAQGTLDVFKKDENGSIGVFATVGTIASKGYENTILALKDKLGY 238
Query: 145 VSQCHIHLVSSMILASRVEEY--------------------------------------- 165
++ LA V+E
Sbjct: 239 KGNLQVYNQGGYGLAEAVDEEPDFINRKAIAPTANYRGPKLDSGAYKIERTLLDVYNFDF 298
Query: 166 -----------ACGIKIKEDEIKKEIEGCFIEKEGKRTDV--------IVLACTHYPLIV 206
++ + + K + +VL CTHYP ++
Sbjct: 299 SNHKMLCDSKSDECGNMQLNAADNYARYHLVSLMEKIRNTKGAQPLKALVLGCTHYPFLI 358
Query: 207 HVFRQL------------------SPWPVDWLDNSDSIARRARCLLPRINTHQT-RVFDD 247
R++ + +D + ++A L + + +
Sbjct: 359 SDIRKILSDLYNFQKNGNFIYRTFMNKDIQIIDPAINVATELYTYLNKQHLFNPAGNMNA 418
Query: 248 HALFLS 253
F+S
Sbjct: 419 SEFFIS 424
>gi|282863002|ref|ZP_06272062.1| Glutamate racemase [Streptomyces sp. ACTE]
gi|282561984|gb|EFB67526.1| Glutamate racemase [Streptomyces sp. ACTE]
Length = 256
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 60/243 (24%), Positives = 94/243 (38%), Gaps = 15/243 (6%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSGIG L +R L P+ + +D P+G + + + ++P
Sbjct: 1 MDSGIGLLAAAAAVRRLRPDADLVLSSDPASMPWGPLTPEGVTE-RALAVARAAAAHRPD 59
Query: 79 LSVIACNTAFTLIKDELR-STFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
+ ++ACNTA LR P++ +G VPAIK AAA G ++I +TPAT Y
Sbjct: 60 VLIVACNTASVHALPTLRDELEPALPVVGTVPAIKPAAA--GGGPVAIWATPATTGSPYQ 117
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
LI + S + V LA VE ++ T +VL
Sbjct: 118 RGLIEDFASHVDVTEVPCPGLADAVEH-------ADEAAIDRAVAAAAALTPPGTAGVVL 170
Query: 198 ACTHYPLIVHVFRQLS----PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
CTHY L+ R + ++D++A +A + + + L
Sbjct: 171 GCTHYELVAERIRAAVRHPGHPDATFHGSADAVAAQALRRVGAVPAPSAEPSGTLTVLLG 230
Query: 254 GKP 256
G P
Sbjct: 231 GHP 233
>gi|205355664|ref|ZP_03222434.1| glutamate racemase [Campylobacter jejuni subsp. jejuni CG8421]
gi|205346441|gb|EDZ33074.1| glutamate racemase [Campylobacter jejuni subsp. jejuni CG8421]
Length = 186
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 71/194 (36%), Gaps = 14/194 (7%)
Query: 79 LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA---AAYTQSGLISILSTPATLRRT 135
+ +IACNTA D LR+ G + A +A A + ++ I +++T AT++
Sbjct: 1 MLIIACNTASAYALDALRAK-AHFPVYGVIDAGVEATIKALHDKNKEILVIATKATIKSE 59
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ S +I+ +++ + VEE + ++ + D +
Sbjct: 60 EYQKRLLSQGY-TNINALATGLFVPMVEEGIFEGDFLQSAMEYYFKNITTP------DAL 112
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGK 255
+LACTH+PL+ + + + D+I + R N + S
Sbjct: 113 ILACTHFPLLGRSLSKYFGDKTKLIHSGDAIVEFLK---ERENIDLKNHKAKLHFYASSD 169
Query: 256 PDIAMRRLMQGFGL 269
+ L
Sbjct: 170 VESLKNTAKIWLNL 183
>gi|207110490|ref|ZP_03244652.1| glutamate racemase [Helicobacter pylori HPKX_438_CA4C1]
Length = 87
Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 15 SILIFDSGIGGLIVLQKMRF-LMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILD 73
I +FDSG+GG VL+ + + + IY D PYG + +K+ +
Sbjct: 2 KIGVFDSGVGGFSVLKSLLKAQLFDE-IIYYGDSARVPYGTKDPTTIKQFGLEALDFF-K 59
Query: 74 KYQPVLSVIACNTAFTLIKDELRST 98
+Q L ++ACNTA L +E++
Sbjct: 60 PHQIELLIVACNTASALALEEMQKH 84
>gi|309807427|ref|ZP_07701390.1| glutamate racemase domain protein [Lactobacillus iners LactinV
01V1-a]
gi|308169349|gb|EFO71404.1| glutamate racemase domain protein [Lactobacillus iners LactinV
01V1-a]
Length = 94
Score = 99.3 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 32/70 (45%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDIL 72
I I DSG+GGL VL+K+ +P I++ D PYG+ + +L
Sbjct: 3 NRPIGILDSGLGGLTVLKKVIQRLPNESTIFIGDQAHMPYGDRTVEDIINLTRASVKFLL 62
Query: 73 DKYQPVLSVI 82
K V+ ++
Sbjct: 63 TKNVKVIILV 72
>gi|326781027|ref|ZP_08240292.1| Glutamate racemase [Streptomyces cf. griseus XylebKG-1]
gi|326661360|gb|EGE46206.1| Glutamate racemase [Streptomyces cf. griseus XylebKG-1]
Length = 256
Score = 97.7 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/245 (23%), Positives = 93/245 (37%), Gaps = 15/245 (6%)
Query: 19 FDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPV 78
DSGIG L +R L P+ + +D P+G + L + ++P
Sbjct: 1 MDSGIGLLAAAAAVRRLRPDAELVLSSDPGSMPWGPRTPEDITA-LALDVARAAAAHRPD 59
Query: 79 LSVIACNTAFTLIKDELR-STFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
++ACNTA LR P++ +G VPAIK AAA G ++I +TPAT Y
Sbjct: 60 ALIVACNTASVHALPALRAELEPALPVIGTVPAIKPAAA--GGGSVAIWATPATTGSPYQ 117
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
LI + + V LA +E + + + +VL
Sbjct: 118 RGLIGDFGGTADVTEVPCPGLADALEHGDEAGIDRAVAAAAALTP-------RDVRAVVL 170
Query: 198 ACTHYPLIVHVFRQLS----PWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS 253
CTHY L+ R P+ ++ ++A +A + + + +
Sbjct: 171 GCTHYELVAARIRDAVQRPDGPPLALHGSAGAVAAQALRRIGAVPAPGAEPSAGLTVLQA 230
Query: 254 GKPDI 258
G+P
Sbjct: 231 GRPAA 235
>gi|311895050|dbj|BAJ27458.1| putative glutamate racemase [Kitasatospora setae KM-6054]
Length = 252
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 54/225 (24%), Positives = 81/225 (36%), Gaps = 14/225 (6%)
Query: 37 PEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELR 96
P+ + D G P+G + + ++P V+ACNTA LR
Sbjct: 24 PDADLVVSCDPDGMPWGPRTPEDITA-HALACARAAVAHRPDALVVACNTASVHALAHLR 82
Query: 97 -STFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSS 155
P++ +G VPAIK AAA G+++I +T T Y LI + +H V+
Sbjct: 83 AEFEPALPVIGTVPAIKPAAAA--GGVVAIWATSRTTGSAYQRGLIEEFGGAARVHEVAC 140
Query: 156 MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW 215
LA VE T +VL CTHY LI + P
Sbjct: 141 HGLAEAVERADRAAIAAAVASAAARTP-------ADTTDVVLGCTHYELIDDLIAAALPG 193
Query: 216 PVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAM 260
P ++D+IA + L + +G+P
Sbjct: 194 PARLHGSADAIAAQTLRRLTP---ATPPGDATLTVLHTGRPATLQ 235
>gi|255022683|ref|ZP_05294669.1| glutamate racemase [Listeria monocytogenes FSL J1-208]
Length = 44
Score = 93.5 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNW 55
++ +I DSG+GGL V++++ +P Y+ D PYG
Sbjct: 1 MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPR 44
>gi|239939360|ref|ZP_04691297.1| putative glutamate racemase [Streptomyces roseosporus NRRL 15998]
gi|291442794|ref|ZP_06582184.1| glutamate racemase [Streptomyces roseosporus NRRL 15998]
gi|291345741|gb|EFE72645.1| glutamate racemase [Streptomyces roseosporus NRRL 15998]
Length = 261
Score = 92.0 bits (227), Expect = 9e-17, Method: Composition-based stats.
Identities = 56/203 (27%), Positives = 78/203 (38%), Gaps = 11/203 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I + DSGIG L +R L P+ + +D P+G L L +
Sbjct: 2 KIALMDSGIGLLAAAAAVRRLRPDAELVLSSDPGSMPWGPRTPEDLTA-LALDVARAAAA 60
Query: 75 YQPVLSVIACNTAFTLIKDELR-STFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+P +IACNTA +R P++ +G VPAIK AAA G ++I +TPAT
Sbjct: 61 QRPDALIIACNTASVHALPAIRAELEPALPVIGTVPAIKPAAA--GGGSVAIWATPATTG 118
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
Y LI + + V LA VE + +
Sbjct: 119 SPYQRGLIAEFGGSAEVTEVPCPGLADAVEHGDEAGIDRTVAAAAALTP-------PDVR 171
Query: 194 VIVLACTHYPLIVHVFRQLSPWP 216
+VL CTHY L+ R P
Sbjct: 172 AVVLGCTHYELVATRIRDAVQRP 194
>gi|239985839|ref|ZP_04706503.1| putative glutamate racemase [Streptomyces roseosporus NRRL 11379]
Length = 261
Score = 92.0 bits (227), Expect = 9e-17, Method: Composition-based stats.
Identities = 56/203 (27%), Positives = 78/203 (38%), Gaps = 11/203 (5%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I + DSGIG L +R L P+ + +D P+G L L +
Sbjct: 2 KIALMDSGIGLLAAAAAVRRLRPDAELVLSSDPGSMPWGPRTPEDLTA-LALDVARAAAA 60
Query: 75 YQPVLSVIACNTAFTLIKDELR-STFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+P +IACNTA +R P++ +G VPAIK AAA G ++I +TPAT
Sbjct: 61 QRPDALIIACNTASVHALPAIRAELEPALPVIGTVPAIKPAAA--GGGSVAIWATPATTG 118
Query: 134 RTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
Y LI + + V LA VE + +
Sbjct: 119 SPYQRGLIAEFGGSAEVTEVPCPGLADAVEHGDEAGIDRTVAAAAALTP-------PDVR 171
Query: 194 VIVLACTHYPLIVHVFRQLSPWP 216
+VL CTHY L+ R P
Sbjct: 172 AVVLGCTHYELVATRIRDAVQRP 194
>gi|213579831|ref|ZP_03361657.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-0664]
Length = 134
Score = 90.8 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 56/130 (43%), Gaps = 3/130 (2%)
Query: 143 SYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHY 202
+ ++C I ++ S L E G + +E+++ + E D +VL CTH+
Sbjct: 1 RFANECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEPP--DTVVLGCTHF 58
Query: 203 PLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP-DIAMR 261
PL+ Q+ P +D+ +IARR LL + A ++ P +
Sbjct: 59 PLLRDELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSTDANIAYCMAMTPGAEQLL 118
Query: 262 RLMQGFGLKS 271
++Q +G ++
Sbjct: 119 PVLQRYGFET 128
>gi|213850149|ref|ZP_03381047.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. M223]
Length = 130
Score = 89.6 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 54/126 (42%), Gaps = 3/126 (2%)
Query: 147 QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIV 206
+C I ++ S L E G + +E+++ + E D +VL CTH+PL+
Sbjct: 1 ECQIAMLGSAELVELAEAKLHGDSVSLEELRRILRPWLRMPEPP--DTVVLGCTHFPLLR 58
Query: 207 HVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKP-DIAMRRLMQ 265
Q+ P +D+ +IARR LL + A ++ P + ++Q
Sbjct: 59 DELLQVLPEGTRLVDSGAAIARRTAWLLEHEAPDAKSTDANIAYCMAMTPGAEQLLPVLQ 118
Query: 266 GFGLKS 271
+G ++
Sbjct: 119 RYGFET 124
>gi|318076535|ref|ZP_07983867.1| glutamate racemase [Streptomyces sp. SA3_actF]
Length = 136
Score = 88.9 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 43/137 (31%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I + DSGIG L +R L P+ + +D P+G + RL ++
Sbjct: 2 KIALLDSGIGLLPAAAAVRGLRPDADLVLSSDPASMPWGPRTSEDIT-RLALGAAEAAAA 60
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPS-MAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+P V+ACNTA T LR+ F +G VPAIK AAA+ ++I +TPAT
Sbjct: 61 LEPDALVVACNTASTHALPALRARFEDTFPVIGTVPAIKPAAAF--GAPVAIWATPATTG 118
Query: 134 RTYTSNLIHSYVSQCHI 150
Y LI + ++
Sbjct: 119 SEYQRRLIAEFAPGGNV 135
>gi|227873306|ref|ZP_03991571.1| possible glutamate racemase [Oribacterium sinus F0268]
gi|227840873|gb|EEJ51238.1| possible glutamate racemase [Oribacterium sinus F0268]
Length = 144
Score = 88.1 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 53/135 (39%), Gaps = 4/135 (2%)
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
++T T++ LI + L+ S + +E K E++ + +
Sbjct: 1 MATEHTIQGERLHQLISRFGDPSQFLLLPSPGIVRLLE----AGKGDSPEMEDYLHQLLL 56
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+ + IVL CTH+P + ++ P+PV + D ++ A+ R L + V
Sbjct: 57 PYQKEAISSIVLGCTHFPFVKEQIQKALPYPVQFFDGAEGTAKETRHRLEERGLLKEGVQ 116
Query: 246 DDHALFLSGKPDIAM 260
+ S D ++
Sbjct: 117 KGEVVLFSSNEDSSL 131
>gi|225075495|ref|ZP_03718694.1| hypothetical protein NEIFLAOT_00503 [Neisseria flavescens
NRL30031/H210]
gi|224953130|gb|EEG34339.1| hypothetical protein NEIFLAOT_00503 [Neisseria flavescens
NRL30031/H210]
Length = 115
Score = 86.6 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 38/104 (36%), Gaps = 2/104 (1%)
Query: 166 ACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDS 225
++ + + + D +VL CTH+PL+ + + + V +D++ +
Sbjct: 1 MEEGWLEHEVTRLTVCEYLKPLLADGIDTLVLGCTHFPLLKPLIGREAH-NVALVDSAIT 59
Query: 226 IARRARCLLPRINTHQT-RVFDDHALFLSGKPDIAMRRLMQGFG 268
A +L + T D+ ++S P + G
Sbjct: 60 TAEETARVLAQEGLLNTDNNNPDYRFYVSDIPLKFRTIGERFLG 103
>gi|76800015|ref|ZP_00781954.1| Glutamate racemase [Streptococcus agalactiae 18RS21]
gi|77412358|ref|ZP_00788669.1| glutamate racemase [Streptococcus agalactiae CJB111]
gi|76584668|gb|EAO61451.1| Glutamate racemase [Streptococcus agalactiae 18RS21]
gi|77161578|gb|EAO72578.1| glutamate racemase [Streptococcus agalactiae CJB111]
Length = 109
Score = 86.2 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 33/99 (33%), Gaps = 3/99 (3%)
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ KK + GK D ++L CTHYPL+ + + + V +D+ R
Sbjct: 1 MSSSLAKKVVYETLSPLVGK-LDTLILGCTHYPLLRPIIQNVMGAEVKLIDSGAETVRDI 59
Query: 231 RCLLPRINTHQT--RVFDDHALFLSGKPDIAMRRLMQGF 267
LL + H + + P Q
Sbjct: 60 SVLLNYFEINHNWQNKHGGHHFYTTASPKGFKEIAEQWL 98
>gi|241758577|ref|ZP_04756692.1| glutamate racemase [Neisseria flavescens SK114]
gi|241321229|gb|EER57401.1| glutamate racemase [Neisseria flavescens SK114]
Length = 185
Score = 85.4 bits (210), Expect = 9e-15, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 38/103 (36%), Gaps = 2/103 (1%)
Query: 167 CGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI 226
+ + + + D +VL CTH+PL+ + + + V +D++ ++
Sbjct: 72 AEGWLGHEVTRLTVCEYLKPLFADGIDTLVLGCTHFPLLKPLIGREAG-NVALVDSAITM 130
Query: 227 ARRARCLLPRINTHQT-RVFDDHALFLSGKPDIAMRRLMQGFG 268
A +L + T D+ ++S P + G
Sbjct: 131 AEETARVLAQEGLLNTDNNNPDYRFYVSDIPLKFRIIGERFLG 173
>gi|30959112|gb|AAO73315.1| glutamate racemase [Helicobacter pylori]
Length = 184
Score = 81.2 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 69/187 (36%), Gaps = 15/187 (8%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDS 225
+ ++ + F + +VI+L CTH+PLI H + + D+
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAHQIEGYFMGHFALSTLPLLIHSGDA 173
Query: 226 IARRARC 232
I +
Sbjct: 174 IVEYLQK 180
>gi|261881985|gb|ACY04876.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 80.0 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 61/169 (36%), Gaps = 9/169 (5%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +++ + ++ L ++ACNTA L E++ P+I
Sbjct: 1 GTKDPTTIRQFGLEALDFF-KPHKIELLIVACNTASALALKEMQKHSKIPIVGVIEPSIL 59
Query: 113 QAAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG- 117
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
E+ + + +VI+L CTH+PLI H
Sbjct: 118 ----ELLETCMRYYFTPLEILPEVIILGCTHFPLIAHQIDGYFMEHFTL 162
>gi|309807437|ref|ZP_07701400.1| glutamate racemase family protein [Lactobacillus iners LactinV
01V1-a]
gi|308169359|gb|EFO71414.1| glutamate racemase family protein [Lactobacillus iners LactinV
01V1-a]
Length = 88
Score = 80.0 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
+ D ++L CTHYPL++ + +D +D +A+ +L R N H
Sbjct: 2 QYDTLILGCTHYPLLIKEIAEFIGKDKKIVDPADQVAQYTFNVLKRDNLLA-EKGGKHEY 60
Query: 251 FLSGKPDIAMRRLMQGF 267
+ +G P M+ +
Sbjct: 61 YTTGDPIKFMKIAQKWM 77
>gi|261881989|gb|ACY04878.1| glutamate racemase [Helicobacter pylori]
gi|261881991|gb|ACY04879.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 80.0 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 62/169 (36%), Gaps = 9/169 (5%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +++ + ++ L ++ACNTA L +E++ P+I
Sbjct: 1 GTKDPTTIRQFGLEALDFF-KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSIL 59
Query: 113 QAAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 AIKQQVKDKNASILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG- 117
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
E+ + + +V++L CTH+PLI H
Sbjct: 118 ----ELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 162
>gi|225010451|ref|ZP_03700922.1| glutamate racemase [Flavobacteria bacterium MS024-3C]
gi|225005280|gb|EEG43231.1| glutamate racemase [Flavobacteria bacterium MS024-3C]
Length = 143
Score = 79.2 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 49/130 (37%), Gaps = 17/130 (13%)
Query: 144 YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYP 203
I L + +E G +E+ + ++ + + K D +VL CTHYP
Sbjct: 1 MQGGVEIIEQEGTGLVALIE----GGFADGEEVAEVLKSYLLPMQEKGIDRLVLGCTHYP 56
Query: 204 LIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-------------RVFDDHAL 250
++ +++ ++ +D + ++A++ + +L + +
Sbjct: 57 YLIPAIKKILSSRIEIIDAAGAVAKQTKKVLEKEGLLVRETVTEELTANDLISKAASYEF 116
Query: 251 FLSGKPDIAM 260
+ +G D+
Sbjct: 117 YSNGATDVLK 126
>gi|293596522|ref|ZP_06684240.1| glutamate racemase [Listeria monocytogenes J2818]
gi|293589868|gb|EFF98202.1| glutamate racemase [Listeria monocytogenes J2818]
Length = 88
Score = 79.2 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 27/74 (36%), Gaps = 1/74 (1%)
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHALFLS 253
++L CTHYPL+ + V +++ + A LL N T +H F +
Sbjct: 1 MILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDATDEEIEHRFFTT 60
Query: 254 GKPDIAMRRLMQGF 267
G I
Sbjct: 61 GSTQIFKDIAKDWL 74
>gi|261881911|gb|ACY04839.1| glutamate racemase [Helicobacter pylori]
gi|261881913|gb|ACY04840.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 78.9 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 63/169 (37%), Gaps = 9/169 (5%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 GTKDPTTIKQFGLEALDFF-KPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSIL 59
Query: 113 QAAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKRQGY-LNVSHLATSLFVPLIEENILEG- 117
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 118 ---ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMEHFAL 162
>gi|261881939|gb|ACY04853.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 78.9 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 61/169 (36%), Gaps = 9/169 (5%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 GTKDPTTIKQFGLEALDFF-KPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSIL 59
Query: 113 QAAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG- 117
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
E+ + + +VI+L CTH+PLI
Sbjct: 118 ----ELLETCMRYYFTLLEILPEVIILGCTHFPLIAQKIEGYFMEHFAL 162
>gi|261881907|gb|ACY04837.1| glutamate racemase [Helicobacter pylori]
gi|261881909|gb|ACY04838.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 78.9 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 32/172 (18%), Positives = 62/172 (36%), Gaps = 9/172 (5%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 GTKDPTTIKQFGLEALDFF-KPHQIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSIL 59
Query: 113 QAAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
++ I +L T AT++ N + +I +++ + +EE
Sbjct: 60 AIKQQVKDKNASILVLGTKATIQSNAYDNALKQQGY-LNISHLATSLFVPLIEENILEG- 117
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222
E+ + + +V++L CTH+PLI L
Sbjct: 118 ----ELLETCMRYYFTPLEILPEVVILGCTHFPLIAQKIESYFMEHFALLTP 165
>gi|261881953|gb|ACY04860.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 78.9 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 64/169 (37%), Gaps = 9/169 (5%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 GTKDPTTIKQFGLEALDFF-KPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSIL 59
Query: 113 QAAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKRQGY-LNVSHLATSLFVPLIEESILEG- 117
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI H
Sbjct: 118 ---ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAHQIEGYFMEHFAL 162
>gi|261881997|gb|ACY04882.1| glutamate racemase [Helicobacter pylori]
gi|261881999|gb|ACY04883.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 78.9 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 62/169 (36%), Gaps = 9/169 (5%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + ++ L ++ACNTA L +E++ P+I
Sbjct: 1 GTKDPTTIKQFGLEALDFF-KSHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSIL 59
Query: 113 QAAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 AIKQQVKDKNTPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG- 117
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
E+ + + +V++L CTH+PLI H
Sbjct: 118 ----ELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 162
>gi|261882003|gb|ACY04885.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 78.9 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 64/169 (37%), Gaps = 9/169 (5%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + ++ L ++ACNTA L +E++ P+I
Sbjct: 1 GTKDPTTIKQFGLEALDFF-KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSIL 59
Query: 113 QAAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 AIKQQVEDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG- 117
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +V++L CTH+PLI H
Sbjct: 118 ---ELLETCMRYYFTPLKI-LPEVVILGCTHFPLIAHQIEGYFMEHFAL 162
>gi|261881951|gb|ACY04859.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 78.5 bits (192), Expect = 8e-13, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 64/169 (37%), Gaps = 9/169 (5%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + +Q L V+ACNTA L +E++ F P+I
Sbjct: 1 GTKDPTTIKQFGLEALDFF-KPHQIKLLVVACNTASALALEEMQKHFKIPIVGVIEPSIL 59
Query: 113 QAAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG- 117
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 118 ---ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIARQIEGYFMGHFAL 162
>gi|261881957|gb|ACY04862.1| glutamate racemase [Helicobacter pylori]
gi|261881959|gb|ACY04863.1| glutamate racemase [Helicobacter pylori]
gi|261881963|gb|ACY04865.1| glutamate racemase [Helicobacter pylori]
gi|261881965|gb|ACY04866.1| glutamate racemase [Helicobacter pylori]
gi|261881967|gb|ACY04867.1| glutamate racemase [Helicobacter pylori]
gi|261881969|gb|ACY04868.1| glutamate racemase [Helicobacter pylori]
gi|261881971|gb|ACY04869.1| glutamate racemase [Helicobacter pylori]
gi|261881973|gb|ACY04870.1| glutamate racemase [Helicobacter pylori]
gi|261881977|gb|ACY04872.1| glutamate racemase [Helicobacter pylori]
gi|261881979|gb|ACY04873.1| glutamate racemase [Helicobacter pylori]
gi|261881983|gb|ACY04875.1| glutamate racemase [Helicobacter pylori]
gi|261882005|gb|ACY04886.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 78.5 bits (192), Expect = 8e-13, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 62/169 (36%), Gaps = 9/169 (5%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + ++ L ++ACNTA L +E++ P+I
Sbjct: 1 GTKDPTTIKQFGLEALDFF-KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSIL 59
Query: 113 QAAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG- 117
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
E+ + + +V++L CTH+PLI H
Sbjct: 118 ----ELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 162
>gi|261881915|gb|ACY04841.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 78.5 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 63/169 (37%), Gaps = 9/169 (5%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 GTKDPTTIKQFGLEALDFF-KPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSIL 59
Query: 113 QAAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 AIKQQVKEKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG- 117
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 118 ---ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMEHFAL 162
>gi|261882001|gb|ACY04884.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 78.5 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 62/169 (36%), Gaps = 9/169 (5%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + ++ L ++ACNTA L +E++ P+I
Sbjct: 1 GTKDPTTIKQFGLEALDFF-KSHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSIL 59
Query: 113 QAAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG- 117
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
E+ + + +V++L CTH+PLI H
Sbjct: 118 ----ELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 162
>gi|325128800|gb|EGC51661.1| glutamate racemase 1 [Neisseria meningitidis N1568]
Length = 94
Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 2/83 (2%)
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT-RVF 245
D +VL CTH+PL+ + + + V +D++ + A +L + T
Sbjct: 1 MLADGIDTLVLGCTHFPLLKPLIGREAG-NVALVDSAITTAEETARVLAQEGLLNTDNNN 59
Query: 246 DDHALFLSGKPDIAMRRLMQGFG 268
D+ ++S P + G
Sbjct: 60 PDYRFYVSDIPLKFRTIGERFLG 82
>gi|261881937|gb|ACY04852.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 65/169 (38%), Gaps = 9/169 (5%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 GTKDPTTIKQFGLEALDFF-KPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSIL 59
Query: 113 QAAA--YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 AIKQQVANKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENI---- 114
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
++ + ++ + F + +VI+L CTH+PLI
Sbjct: 115 LESELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMGHFAL 162
>gi|261881943|gb|ACY04855.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 78.1 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 63/169 (37%), Gaps = 9/169 (5%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 GTKDPTTIKQFGLEALDFF-KPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSIL 59
Query: 113 QAAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 AIKQQVKDKNASILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG- 117
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 118 ---ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMEHFAL 162
>gi|261881929|gb|ACY04848.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 78.1 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 64/169 (37%), Gaps = 9/169 (5%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 GTKDPTTIKQFGLEALDFF-KPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSIL 59
Query: 113 QAAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG- 117
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI H
Sbjct: 118 ---ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAHQIEGYFMGHFAL 162
>gi|261881961|gb|ACY04864.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 78.1 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 63/169 (37%), Gaps = 9/169 (5%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + ++ L ++ACNTA TL +E++ P+I
Sbjct: 1 GTKDPTTIKQFGLEALDFF-KPHKIELLIVACNTASTLALEEMQKHSKIPIVGVIEPSIL 59
Query: 113 QAAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG- 117
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
E+ + + +V++L CTH+PLI H
Sbjct: 118 ----ELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 162
>gi|261881975|gb|ACY04871.1| glutamate racemase [Helicobacter pylori]
gi|261881981|gb|ACY04874.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 78.1 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 62/169 (36%), Gaps = 9/169 (5%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + ++ L ++ACNTA L +E++ P+I
Sbjct: 1 GTKDPTTIKQFGLKALDFF-KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSIL 59
Query: 113 QAAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG- 117
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
E+ + + +V++L CTH+PLI H
Sbjct: 118 ----ELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 162
>gi|261881987|gb|ACY04877.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 78.1 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 64/169 (37%), Gaps = 9/169 (5%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + ++ L ++ACNTA L +E++ P+I
Sbjct: 1 GTKDPTTIKQFGLEALDFF-KPHKIELLIVACNTASALALEEMQKYSKIPIVGVIEPSIL 59
Query: 113 QAAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
++ I +L T AT++ N + ++ +++ + +EE +
Sbjct: 60 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEGE 118
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ E ++ I + V++L CTH+PLI H
Sbjct: 119 LLETCMRYYFTPLEILPK-----VVILGCTHFPLIAHQIEGYFMEHFAL 162
>gi|261881993|gb|ACY04880.1| glutamate racemase [Helicobacter pylori]
gi|261881995|gb|ACY04881.1| glutamate racemase [Helicobacter pylori]
gi|261882007|gb|ACY04887.1| glutamate racemase [Helicobacter pylori]
gi|261882009|gb|ACY04888.1| glutamate racemase [Helicobacter pylori]
gi|261882011|gb|ACY04889.1| glutamate racemase [Helicobacter pylori]
gi|261882013|gb|ACY04890.1| glutamate racemase [Helicobacter pylori]
gi|261882015|gb|ACY04891.1| glutamate racemase [Helicobacter pylori]
gi|261882019|gb|ACY04893.1| glutamate racemase [Helicobacter pylori]
gi|261882021|gb|ACY04894.1| glutamate racemase [Helicobacter pylori]
gi|261882023|gb|ACY04895.1| glutamate racemase [Helicobacter pylori]
gi|261882025|gb|ACY04896.1| glutamate racemase [Helicobacter pylori]
gi|261882027|gb|ACY04897.1| glutamate racemase [Helicobacter pylori]
gi|261882029|gb|ACY04898.1| glutamate racemase [Helicobacter pylori]
gi|261882031|gb|ACY04899.1| glutamate racemase [Helicobacter pylori]
gi|261882033|gb|ACY04900.1| glutamate racemase [Helicobacter pylori]
gi|261882035|gb|ACY04901.1| glutamate racemase [Helicobacter pylori]
gi|261882037|gb|ACY04902.1| glutamate racemase [Helicobacter pylori]
gi|261882039|gb|ACY04903.1| glutamate racemase [Helicobacter pylori]
gi|261882041|gb|ACY04904.1| glutamate racemase [Helicobacter pylori]
gi|261882043|gb|ACY04905.1| glutamate racemase [Helicobacter pylori]
gi|261882045|gb|ACY04906.1| glutamate racemase [Helicobacter pylori]
gi|261882047|gb|ACY04907.1| glutamate racemase [Helicobacter pylori]
gi|261882049|gb|ACY04908.1| glutamate racemase [Helicobacter pylori]
gi|261882051|gb|ACY04909.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 77.7 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 62/169 (36%), Gaps = 9/169 (5%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + ++ L ++ACNTA L +E++ P+I
Sbjct: 1 GTKDPTTIKQFGLEALDFF-KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIGPSIL 59
Query: 113 QAAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG- 117
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
E+ + + +V++L CTH+PLI H
Sbjct: 118 ----ELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 162
>gi|261881955|gb|ACY04861.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 77.7 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 62/169 (36%), Gaps = 9/169 (5%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + ++ L ++ACNTA L +E++ P+I
Sbjct: 1 GTKDPTTIKQFGLEALDFF-KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSIL 59
Query: 113 QAAAYTQ--SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
+ + I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 SIKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG- 117
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
E+ + + +V++L CTH+PLI H
Sbjct: 118 ----ELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 162
>gi|261881945|gb|ACY04856.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 77.7 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 61/169 (36%), Gaps = 9/169 (5%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 GTKDPTTIKQFGLEALDFF-KPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSIL 59
Query: 113 QAAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 AIKQQVKDKNASILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG- 117
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
E+ + + +V++L CTH+PLI
Sbjct: 118 ----ELLETCMRYYFTPLEILPEVVILGCTHFPLIAQKIEGYFIEHFAL 162
>gi|261881941|gb|ACY04854.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 77.7 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 63/169 (37%), Gaps = 9/169 (5%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 GTKDPTTIKQFGLEALDFF-KPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSIL 59
Query: 113 QAAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG- 117
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 118 ---ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMEHFAL 162
>gi|261881947|gb|ACY04857.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 77.3 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 63/169 (37%), Gaps = 9/169 (5%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 GTKDPTTIKQFGLEALDFF-KPHQIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSIL 59
Query: 113 QAAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG- 117
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +V++L CTH+PLI
Sbjct: 118 ---ELLETCMRYYFTPLKI-LPEVVILGCTHFPLIAQKIEGYFMEHFAL 162
>gi|261881949|gb|ACY04858.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 77.3 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 63/169 (37%), Gaps = 9/169 (5%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + ++ L ++ACNTA L +E++ P+I
Sbjct: 1 GTKDPTTIKQFGLEALDFF-KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSIL 59
Query: 113 QAAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG- 117
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +V++L CTH+PLI
Sbjct: 118 ---ELLETCMRYYFTPLKI-LPEVVILGCTHFPLIAQKIEGYFMEHFAL 162
>gi|194291994|ref|YP_002007901.1| aspartate/glutamate/hydantoin racemase [Cupriavidus taiwanensis LMG
19424]
gi|193225898|emb|CAQ71845.1| putative aspartate/glutamate/hydantoin racemase [Cupriavidus
taiwanensis LMG 19424]
Length = 3569
Score = 77.3 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 46/275 (16%), Positives = 81/275 (29%), Gaps = 31/275 (11%)
Query: 13 QNSILI--FDSGIGGLIVLQKMRFLM-----PEYHFIYVADDVGFPYGNWEDHALKKRLM 65
++I+I FDS GGL+ Q + + D YG E L +
Sbjct: 1727 DDAIVITAFDSSNGGLLAAQNIARHTYAMTGKAVQVVAFTDHAAGTYGGRERGDLVNLVH 1786
Query: 66 FLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI 125
V ACNTA T + L T + + + +
Sbjct: 1787 AGVVAAQKAKGAVDL-FACNTACTAFPEALAGTHQAKVVNLIMQTAPRIVTE-GGARPVV 1844
Query: 126 LSTPATLRRTYTSNLI-HSYVSQCHIHLVSSMILASRVEEYAC-GIKIKEDEIKKEIEGC 183
++TP T++ + + + + + A V K +++K +
Sbjct: 1845 VATPGTVKLHAYLEAVAEASGGSVTVKEIGATEWADAVNNLMHLADGAKLEQLKGLVAKY 1904
Query: 184 F-IEKEGKRTDVIVLACTHYPLIVHVFRQLSP----WPVDWLDNSDSIARRARCLLPRIN 238
E+ + CTHYP + + RQ V +D AR+ +L
Sbjct: 1905 INAEQIPADATSLWFCCTHYPALETLVRQQLDAIGRSDVRLIDPMQYQARKGVEMLVDQG 1964
Query: 239 TH---------------QTRVFDDHALFLSGKPDI 258
+F +G+P
Sbjct: 1965 LIDRSALLEQPLDPSAVPDDKTLPTIVFTTGQPSR 1999
>gi|213421905|ref|ZP_03354971.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E01-6750]
Length = 109
Score = 77.3 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Query: 168 GIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
G + +E+++ + E D +VL CTH+PL+ Q+ P +D+ +IA
Sbjct: 1 GDSVSLEELRRILRPWLRMPEPP--DTVVLGCTHFPLLRDELLQVLPEGTRLVDSGAAIA 58
Query: 228 RRARCLLPRINTHQTRVFDDHALFLSGKP-DIAMRRLMQGFGLKS 271
RR LL + A ++ P + ++Q +G ++
Sbjct: 59 RRTAWLLEHEAPDAKSTDANIAYCMAMTPGAEQLLPVLQRYGFET 103
>gi|261881923|gb|ACY04845.1| glutamate racemase [Helicobacter pylori]
gi|261881925|gb|ACY04846.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 77.3 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 63/169 (37%), Gaps = 9/169 (5%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 GTKDPTTIKQFGLEALDFF-KPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSIL 59
Query: 113 QAAAY--TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
++ I +L T AT++ N + ++ +++ + +EE +
Sbjct: 60 AIKRQVENKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEGE 118
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ E ++ I + VI+L CTH+PLI
Sbjct: 119 LLETCMRYYFAPLKILPK-----VIILGCTHFPLIARQIEGYFMGHFAL 162
>gi|261881931|gb|ACY04849.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 77.3 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/172 (18%), Positives = 62/172 (36%), Gaps = 9/172 (5%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 GTKDPTTIKQFGLEALDFF-KPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSIL 59
Query: 113 QAAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG- 117
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222
E+ + + +VI+L CTH+PLI L
Sbjct: 118 ----ELLETCMRYYFTPLEILPEVIILGCTHFPLIAQKIEGYFMGHFALLTP 165
>gi|261881927|gb|ACY04847.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 77.3 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 63/169 (37%), Gaps = 9/169 (5%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 GTKDPTTIKQFGLEALDFF-KPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSIL 59
Query: 113 QAAAY--TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
++ I +L T AT++ N + ++ +++ + +EE +
Sbjct: 60 AIKRQVENKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEGE 118
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ E ++ I + VI+L CTH+PLI
Sbjct: 119 LLETCMRYYFAPLKILPK-----VIILGCTHFPLIAQKIEGYFMGHFAL 162
>gi|25808657|gb|AAN74455.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 77.3 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/171 (18%), Positives = 64/171 (37%), Gaps = 9/171 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE G
Sbjct: 60 IKQQVKDKNASILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILGG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222
+ ++ + F + +VI+L CTH+PLI L
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMEHFALLTP 164
>gi|261881935|gb|ACY04851.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 76.9 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 63/169 (37%), Gaps = 9/169 (5%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 GTKDPTTIKQFGLEALDFF-KPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSIL 59
Query: 113 QAAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 AIKQQVKDKNAPILVLGTKATIQSNAYDNAMKQQGY-LNVSHLATSLFVPLIEESILEG- 117
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 118 ---ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMEHFAL 162
>gi|261881919|gb|ACY04843.1| glutamate racemase [Helicobacter pylori]
gi|261881933|gb|ACY04850.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 76.9 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 63/169 (37%), Gaps = 9/169 (5%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 GTKDPTTIKQFGLEALDFF-KPHQIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSIL 59
Query: 113 QAAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG- 117
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 118 ---ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMGHFAL 162
>gi|167741430|ref|ZP_02414204.1| glutamate racemase [Burkholderia pseudomallei 14]
Length = 113
Score = 76.9 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 29/92 (31%), Gaps = 3/92 (3%)
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
D +VL CTHYP + R ++ + +D D+IAR+ +L
Sbjct: 2 YLEPMLEAGADTLVLGCTHYPFLGAAIRDVTRNRLHLIDTGDAIARQLARVLDERGLRAP 61
Query: 243 ---RVFDDHALFLSGKPDIAMRRLMQGFGLKS 271
R + GL +
Sbjct: 62 ASLRPAPLPRFCSTSDGRQLQALAATLLGLDA 93
>gi|25808719|gb|AAN74486.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 76.9 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +V++L CTH+PLI
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVVILGCTHFPLIAQKIEGYFMEHFTL 161
>gi|25808711|gb|AAN74482.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 76.9 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/168 (16%), Positives = 61/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +++ + ++ L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIRQFGLEALDFF-KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNASILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
E+ + + +V++L CTH+PLI H
Sbjct: 117 ---ELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 161
>gi|25808695|gb|AAN74474.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 76.9 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/168 (16%), Positives = 63/168 (37%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +++ + ++ L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIRQFGLEALDFF-KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQDY-LNVSHLATSLFVPLIEENILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +V++L CTH+PLI H
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVVILGCTHFPLIAHQIEGYFMEHFAL 161
>gi|25808673|gb|AAN74463.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 76.5 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAA--YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVANKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808647|gb|AAN74450.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 76.2 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 60/168 (35%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
E+ + + +VI+L CTH+PLI
Sbjct: 117 ---ELLETCMRYYFTPLEILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808685|gb|AAN74469.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 76.2 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808713|gb|AAN74483.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 75.8 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 61/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + ++ L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPITIKQFGLEALDFF-KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
E+ + + +V++L CTH+PLI H
Sbjct: 117 ---ELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 161
>gi|25808619|gb|AAN74436.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 75.8 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 9/171 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222
E+ + + +VI+L CTH+PLI L
Sbjct: 117 ---ELLETCMRYYFTPLEILPEVIILGCTHFPLIAQKIEGYFMEHFALLTP 164
>gi|25808761|gb|AAN74507.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 75.8 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 61/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + ++ L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVEDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
E+ + + +V++L CTH+PLI H
Sbjct: 117 ---ELLETCMRYYFPHLKILPEVVILGCTHFPLIAHQIEGYFMEHFAL 161
>gi|25808663|gb|AAN74458.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 75.8 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKRQGY-LNVSHLATSLFVPLIEENILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808755|gb|AAN74504.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 75.8 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 60/168 (35%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
E+ + + +VI+L CTH+PLI
Sbjct: 117 ---ELLETCMRYYFTLLEILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808717|gb|AAN74485.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 75.8 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 62/171 (36%), Gaps = 9/171 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-NPHQIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + +I +++ + +EE
Sbjct: 60 IKQQVKDKNASILVLGTKATIQSNAYDNALKQQGY-LNISHLATSLFVPLIEENILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222
E+ + + +V++L CTH+PLI L
Sbjct: 117 ---ELLETCMRYYFTPLEILPEVVILGCTHFPLIAQKIESYFMEHFALLTP 164
>gi|261881917|gb|ACY04842.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 75.8 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 63/169 (37%), Gaps = 9/169 (5%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + ++ L ++ACNTA L +E++ P+I
Sbjct: 1 GTKDPTTIKQFGLEALDFF-KPHEIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSIL 59
Query: 113 QAAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 AIKQQVKDKNTPILVLGTKATIQSNAYDNALKKQGY-LNVSHLATSLFVPLIEESILEG- 117
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 118 ---ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMGHFAL 162
>gi|25808715|gb|AAN74484.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 75.8 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 60/168 (35%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + ++ L ++ACNTA L E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHKIELLIVACNTASALALKEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT+R N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIRSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
E+ + + +V++L CTH+PLI H
Sbjct: 117 ---ELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 161
>gi|25808681|gb|AAN74467.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 75.8 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + ++ L ++ACNTA L E++ P+I
Sbjct: 1 TKDPITIKQFGLEALDFF-KPHKIELLIVACNTASALALKEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +V++L CTH+PLI H
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVVILGCTHFPLIAHQIEGYFMEHFAL 161
>gi|261882017|gb|ACY04892.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 75.8 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 61/169 (36%), Gaps = 9/169 (5%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + ++ L ++ACNTA L +E++ +I
Sbjct: 1 GTKDPTTIKQFGLEALDFF-KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIGSSIL 59
Query: 113 QAAAYTQ--SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
+ + I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 AIKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG- 117
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
E+ + + +V++L CTH+PLI H
Sbjct: 118 ----ELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIESYFMEHFAL 162
>gi|25808621|gb|AAN74437.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 75.4 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 60/168 (35%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNASILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
E+ + + +V++L CTH+PLI
Sbjct: 117 ---ELLETCMRYYFTPLEILPEVVILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808759|gb|AAN74506.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 75.4 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 63/168 (37%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L V+ACNTA L +E++ F P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIKLLVVACNTASALALEEMQKHFKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIARQIEGYFMGHFAL 161
>gi|25808707|gb|AAN74480.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 75.4 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 61/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + ++ L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
E+ + + +V++L CTH+PLI H
Sbjct: 117 ---ELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 161
>gi|25808649|gb|AAN74451.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 75.4 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQSY-LNVSHLATSLFVPLIEENILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808735|gb|AAN74494.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 75.4 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808645|gb|AAN74449.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 75.4 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQDY-LNVSHLATSLFVPLIEENILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808737|gb|AAN74495.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 75.4 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 64/168 (38%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAA--YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE +
Sbjct: 60 IKQQVANKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENI----L 114
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ + ++ + F + +VI+L CTH+PLI
Sbjct: 115 ESELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMGHFAL 161
>gi|25808697|gb|AAN74475.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 75.4 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 60/168 (35%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + ++ L ++ACNTA L E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHKIELLIVACNTASALALKEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
E+ + + +V++L CTH+PLI H
Sbjct: 117 ---ELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 161
>gi|25808635|gb|AAN74444.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 75.0 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L V+ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIGLLVVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAY--TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQLKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMDHFAL 161
>gi|25808693|gb|AAN74473.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 75.0 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 63/168 (37%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + ++ L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHKIELLIVACNTASALALEEMQKYSKIPIVGVIGPSILA 59
Query: 114 AAAYTQ--SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
+ + I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI H
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAHQIEGYFMEHFTL 161
>gi|25808643|gb|AAN74448.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 75.0 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKRQGY-LNVSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808739|gb|AAN74496.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 75.0 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNASILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808699|gb|AAN74476.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 75.0 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + ++ L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
E+ + + +V++L CTH+PLI H +
Sbjct: 117 ---ELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAF 161
>gi|25808633|gb|AAN74443.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 75.0 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNASILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808747|gb|AAN74500.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 75.0 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 63/168 (37%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + ++ L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE ++
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEGEL 118
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
E ++ I + VI+L CTH+PLI H
Sbjct: 119 LETCMRYYFAPLKILPK-----VIILGCTHFPLIAHQIEGYFMEHFAL 161
>gi|25808669|gb|AAN74461.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 75.0 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIKLLIVACNTASALALEEMQKHSTIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808623|gb|AAN74438.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 75.0 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +E +
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKRQGY-LNVSHLATSLFVPLIE----ESIL 114
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 115 DGELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMGHFAL 161
>gi|25808749|gb|AAN74501.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 75.0 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +V++L CTH+PLI
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVVILGCTHFPLIAQKIEGYFMGHFAL 161
>gi|25808683|gb|AAN74468.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 75.0 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 60/168 (35%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + ++ L ++ACNTA L E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHKIELLIVACNTASALALGEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYTQ--SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
+ + I +L T AT+R N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIRSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
E+ + + +V++L CTH+PLI H
Sbjct: 117 ---ELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYLMEHFAL 161
>gi|25808667|gb|AAN74460.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 75.0 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIKLLIVACNTASALALEEMQKHSTIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808703|gb|AAN74478.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 75.0 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 63/168 (37%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + ++ L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQDY-LNVSHLATSLFVPLIEENILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +V++L CTH+PLI H
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVVILGCTHFPLIAHQIEGYFMKHFSL 161
>gi|25808709|gb|AAN74481.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 75.0 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 63/168 (37%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + ++ L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHKIELLIVACNTASALALEEMQKYSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE ++
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEGEL 118
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
E ++ I + V++L CTH+PLI H
Sbjct: 119 LETCMRYYFTPLEILPK-----VVILGCTHFPLIAHQIEGYFMEHFAL 161
>gi|25808679|gb|AAN74466.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 74.6 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 61/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + ++ L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + +I +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNISHLATSLFVPLIEENILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
E+ + + +V++L CTH+PLI H
Sbjct: 117 ---ELLETCMRYYFAPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 161
>gi|25808765|gb|AAN74509.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 74.6 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 60/168 (35%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
E+ + + +VI+L CTH+PLI
Sbjct: 117 ---ELLETCMRYYFTPLEILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808705|gb|AAN74479.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 74.6 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/168 (16%), Positives = 59/168 (35%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + ++ L ++ACNTA L E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHKIELLIVACNTASALALKEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
E+ + + +V++L CTH+PLI
Sbjct: 117 ---ELLETCMRYYFTPLEILPEVVILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808659|gb|AAN74456.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 74.6 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 63/171 (36%), Gaps = 9/171 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIKLLIVACNTASALALEEMQKHSKIPVVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222
+ ++ + F + +VI+L CTH+PLI L
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMGHFALLTP 164
>gi|25808763|gb|AAN74508.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 74.6 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAA--YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKRQVANKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMGHFAL 161
>gi|25808691|gb|AAN74472.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 74.6 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + ++ L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + S +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVSLIEENILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
E+ + + +V++L CTH+PLI H
Sbjct: 117 ---ELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 161
>gi|25808675|gb|AAN74464.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 74.6 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 63/171 (36%), Gaps = 9/171 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222
+ ++ + F + +VI+L CTH+PLI L
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMGHFALLTP 164
>gi|25808631|gb|AAN74442.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 74.6 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAY--TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKRQVENKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMGHFAL 161
>gi|25808725|gb|AAN74489.1| glutamate racemase [Helicobacter pylori]
gi|25808757|gb|AAN74505.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 74.6 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808751|gb|AAN74502.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 74.6 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 60/168 (35%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAY--TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKRQVENKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
E+ + + +VI+L CTH+PLI
Sbjct: 117 ---ELLETCMRYYFTPLEILPEVIILGCTHFPLIAQKIEGYFMGHFAL 161
>gi|25808687|gb|AAN74470.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 74.6 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 61/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + ++ L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNASILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
E+ + + +V++L CTH+PLI H
Sbjct: 117 ---ELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 161
>gi|25808627|gb|AAN74440.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 74.2 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMGHFAL 161
>gi|25808651|gb|AAN74452.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 74.2 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKRQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808727|gb|AAN74490.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 74.2 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 63/168 (37%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI H
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAHQIEGYFMGHFAL 161
>gi|25808745|gb|AAN74499.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 74.2 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 64/168 (38%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + ++ L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIGPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ + N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSSAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +V++L CTH+PLI H
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVVILGCTHFPLIAHQIEGYFMEHFAL 161
>gi|25808733|gb|AAN74493.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 74.2 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKRQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808723|gb|AAN74488.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 74.2 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAY--TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE ++
Sbjct: 60 IKRQVENKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEGEL 118
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
E ++ I + VI+L CTH+PLI
Sbjct: 119 LETCMRYYFAPLKILPK-----VIILGCTHFPLIARQIEGYFMGHFAL 161
>gi|25808677|gb|AAN74465.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 74.2 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/162 (18%), Positives = 63/162 (38%), Gaps = 9/162 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + ++ L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHKIELLIVACNTASALALEEMQKYSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT+R N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIRSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS 213
+ ++ + F + +V++L CTH+PLI H
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVVILGCTHFPLIAHQIEGYF 155
>gi|25808701|gb|AAN74477.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 74.2 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 63/171 (36%), Gaps = 9/171 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKRQVEDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222
+ ++ + F + +VI+L CTH+PLI L
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIARQIEGYFMGHFALLTP 164
>gi|25808753|gb|AAN74503.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 74.2 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 61/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + ++ L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHKIGLLIVACNTASALALEEMQKHSKIPIVGVIGPSILA 59
Query: 114 AAAYTQ--SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
+ + I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
E+ + + +V++L CTH+PLI H
Sbjct: 117 ---ELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFAL 161
>gi|25808671|gb|AAN74462.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 60/168 (35%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIGLLIVACNTASALALEEMQKHSKIPVVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
E+ + + +VI+L CTH+PLI
Sbjct: 117 ---ELLETCMRYYFTLLEILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|25808771|gb|AAN74512.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIELLIVACNTASALALEEMQKHSKIPVVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|298254739|ref|ZP_06978325.1| glutamate racemase [Streptococcus pneumoniae str. Canada MDR_19A]
Length = 86
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 28/75 (37%), Gaps = 2/75 (2%)
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDD--HALFL 252
++L CTHYPL+ + + + V +D+ R LL ++ R H +
Sbjct: 1 MILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINRGRDAGPLHHRFYT 60
Query: 253 SGKPDIAMRRLMQGF 267
+ + +
Sbjct: 61 TASSQSFAQIGEEWL 75
>gi|261881921|gb|ACY04844.1| glutamate racemase [Helicobacter pylori]
Length = 167
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 62/169 (36%), Gaps = 9/169 (5%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + +K+ + ++ L ++ACNT L +E++ P+I
Sbjct: 1 GTKDPTTIKQFGLEALDFF-KPHKIELLIVACNTVSALALEEMQKHSKIPIVGVIEPSIL 59
Query: 113 QAAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 AIKRQVEDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG- 117
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 118 ---ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIARQIEGYFMGHFAL 162
>gi|25808641|gb|AAN74447.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 73.5 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFIGHFAL 161
>gi|25808769|gb|AAN74511.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 73.5 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIARQIEGYFMGHFAL 161
>gi|25808629|gb|AAN74441.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 73.5 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVEDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMGHFAL 161
>gi|25808639|gb|AAN74446.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 73.5 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 61/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAA--YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
+ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVANKKAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMGHFAL 161
>gi|25808743|gb|AAN74498.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 73.5 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + ++ L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHEIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAY--TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKRQVENKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIARQIEGYFMGHFAL 161
>gi|25808689|gb|AAN74471.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 73.1 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 59/168 (35%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+K+ + +Q L ++ACNTA L E++ P+I
Sbjct: 1 TKGPTTIKQFGLEALDFF-KPHQIGLLIVACNTASALALGEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYTQ--SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
+ + I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEENILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
E+ + + +V++L CTH+PLI H
Sbjct: 117 ---ELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMKHFTL 161
>gi|25808721|gb|AAN74487.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 73.1 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAY--TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKRQVENKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMGHFAL 161
>gi|25808665|gb|AAN74459.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 73.1 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMGHFAL 161
>gi|25808655|gb|AAN74454.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 72.7 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIELLIVACNTASALALEEMQKHSKIPVVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNASILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMGHFAL 161
>gi|332756498|gb|EGJ86849.1| hypothetical protein SF274771_2973 [Shigella flexneri 2747-71]
Length = 161
Score = 72.7 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 31/145 (21%), Positives = 60/145 (41%), Gaps = 4/145 (2%)
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
Q + I++T T++ LI S ++ S LA +EE ++IKK
Sbjct: 5 QYKNVGIIATEFTIKTGCHKELIKKLNSTINVFGEPSKNLAMLIEEGNLNAPAILNDIKK 64
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+ + I+L CTHYP++ + F ++P + +++ + A + L ++N
Sbjct: 65 HVNHLIS---LHPVNEIILGCTHYPIVQNFFEAVAPD-IKFINPAHDQAISIKNHLGQLN 120
Query: 239 THQTRVFDDHALFLSGKPDIAMRRL 263
+ + SG +I L
Sbjct: 121 LLNSSNIGTLQINTSGSMEIYKTVL 145
>gi|25808767|gb|AAN74510.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 72.7 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + ++ L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHEIGLLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNTPILVLGTKATIQSNAYDNALKKQGY-LNVSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMGHFAL 161
>gi|25808729|gb|AAN74491.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 72.7 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 63/168 (37%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIELLIVACNTASALALEEMQKHSKIPVVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI +
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMGHFAF 161
>gi|25808731|gb|AAN74492.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 72.3 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 60/168 (35%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIGLLIVACNTASALALEEMQKHSKIPVVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNASILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
E+ + + +VI+L CTH+PLI
Sbjct: 117 ---ELLETCMRYYFTPLEILPEVIILGCTHFPLIAQKIEGYFMGHFAL 161
>gi|25808625|gb|AAN74439.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 72.3 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 60/168 (35%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTPIKQFGLEALDFF-KPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
E+ + + +VI+L CTH+PLI
Sbjct: 117 ---ELLETCMRYYFTPLEILPEVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|238023769|ref|YP_002908001.1| Aspartate racemase [Burkholderia glumae BGR1]
gi|237878434|gb|ACR30766.1| Aspartate racemase [Burkholderia glumae BGR1]
Length = 509
Score = 72.3 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 38/250 (15%), Positives = 80/250 (32%), Gaps = 38/250 (15%)
Query: 7 PCEKKLQNSILIFDSGIGGL----IV--LQKMRFLMPEYHFIYVADDVG----------F 50
P + I + +GG+ V L+K+ P D
Sbjct: 253 PAAEPGPLRIGV----VGGVGPAATVDFLRKLVDHTPAAR-----DQDHLKVLVEQNPQI 303
Query: 51 P------YGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF 104
P G+ D + ++ L++ L I CNTA ++ +
Sbjct: 304 PDRTAHLIGDGPDPTV---SLYAACKRLEQGGADLVAIPCNTAHAFVERIQPHLGIPIIN 360
Query: 105 LGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEE 164
+ V A + + + +L+T TL + + + + +
Sbjct: 361 MLTVTARRLRERFPALREVGVLATSGTLASGVYRDALAAEGFAQQVPPPALQARVMAAIY 420
Query: 165 YACGIK--IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD--WL 220
G+K E +++I V++L CT PL++ + ++P +
Sbjct: 421 GKFGVKAGFTEGRCREDIGAALDALIAAGAAVVLLGCTELPLLLPMADYVAPDGAHAVLV 480
Query: 221 DNSDSIARRA 230
D ++ +A+
Sbjct: 481 DPTEVLAKAC 490
>gi|25808637|gb|AAN74445.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 71.9 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + ++ L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHKIELLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKRQVKDKNAPILVLGTKATIQSNAYDNALKQQSY-LNVSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMGHFAL 161
>gi|206895393|ref|YP_002246837.1| glutamate racemase, putative [Coprothermobacter proteolyticus DSM
5265]
gi|206738010|gb|ACI17088.1| glutamate racemase, putative [Coprothermobacter proteolyticus DSM
5265]
Length = 268
Score = 71.9 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 39/250 (15%), Positives = 69/250 (27%), Gaps = 35/250 (14%)
Query: 17 LIFDSGIGG--LIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
L++DSGIGG + ++ + ++ AD + FP G + L L F
Sbjct: 19 LVYDSGIGGAWFSL--ELLRRKKAHRVVFYADTLNFPLGLKSETELYNILDQFFGYASVA 76
Query: 75 YQP-----VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ACNT ++ + F IL+T
Sbjct: 77 ATKPAEVFDGIFLACNTISSVYLRYWPVFKKKVPFPIVH-TYAYHNGLIGLPKPLILATE 135
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
AT+R + + +E K ++
Sbjct: 136 ATVRARIYTYFTAGRGVEM--------PATDLIEALQQD---DTQRAKGLVKQTATFARK 184
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD--- 246
+R +VL CTH + +F + + D +L +
Sbjct: 185 ERFSHVVLGCTHLSEVAALFEE---EGLPVYDP-------LAQILGNLKLDNDEGVGANT 234
Query: 247 -DHALFLSGK 255
L +G
Sbjct: 235 QQLILHATGD 244
>gi|25808653|gb|AAN74453.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 61/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNT L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIELLIVACNTVSALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYTQ--SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
+ + I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKQQVKDKNASILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIARQIEGYFMGHFAL 161
>gi|330904118|gb|EGH34690.1| glutamate racemase [Pseudomonas syringae pv. japonica str.
M301072PT]
Length = 44
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVAD 46
+ IFDSG+GGL VL ++R L+P +Y+AD
Sbjct: 11 DAPVGIFDSGVGGLSVLNEVRQLLPSESLLYLAD 44
>gi|168185453|ref|ZP_02620088.1| aspartate racemase [Clostridium botulinum C str. Eklund]
gi|169296186|gb|EDS78319.1| aspartate racemase [Clostridium botulinum C str. Eklund]
Length = 252
Score = 70.8 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/192 (14%), Positives = 56/192 (29%), Gaps = 6/192 (3%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
+ + L + ++ CNTA D+++ K I
Sbjct: 64 ALIETAMKLKLMGADIIIMPCNTAH-FFLDKIQKVVNIPFINMIDEVAKYILNICSDKRI 122
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L+T T + +Y + + DE ++
Sbjct: 123 GLLATQGTYKGKVYETCFKNYNIDVITPREKYKDIILDLIYQVKKGVKSFDE--SLVKRI 180
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL---LPRINTH 240
E + K IVL CT P++ + R ++ ++D +AR L R ++
Sbjct: 181 LKEFKDKNIKTIVLGCTELPILFNDIRFNELKDFRFISSTDILARETVKRALELERRVSY 240
Query: 241 QTRVFDDHALFL 252
+
Sbjct: 241 ERNKCTTDNFCC 252
>gi|323529527|ref|YP_004231679.1| aspartate racemase [Burkholderia sp. CCGE1001]
gi|323386529|gb|ADX58619.1| aspartate racemase [Burkholderia sp. CCGE1001]
Length = 487
Score = 70.8 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/176 (15%), Positives = 56/176 (31%), Gaps = 8/176 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL- 122
++ L++ + I CNTA ++ + + + + +
Sbjct: 306 SLYATCKRLEEGGADIIAIPCNTAHAFVERI--QPYLRVPIVNMLTETVRYVHEHYPAQR 363
Query: 123 -ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK--IKEDEIKKE 179
I +L+T T+ + + Q + + G+K +
Sbjct: 364 KIGVLATSGTMASGVYEKALEAQGLQQIAPEPALQSRVMQAIYGKQGVKAGFTAGACHDD 423
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQL--SPWPVDWLDNSDSIARRARCL 233
I + +VIVL CT PL++ + V +D + +ARR
Sbjct: 424 IAAAVEGLIDEGVEVIVLGCTELPLLLPHAEFVGSGGARVTLIDPTHVLARRCIAY 479
>gi|25808741|gb|AAN74497.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 70.8 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/168 (16%), Positives = 61/168 (36%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + ++ L ++ACNT L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHKIELLIVACNTVSALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + ++ +++ + +EE
Sbjct: 60 IKRQVEDKNAPILVLGTKATIQSNAYDNALKQQGY-LNVSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + +VI+L CTH+PLI
Sbjct: 117 --ELLETCMRYYFTPLKI-LPEVIILGCTHFPLIARQIEGYFMGHFAL 161
>gi|25808661|gb|AAN74457.1| glutamate racemase [Helicobacter pylori]
Length = 166
Score = 70.8 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 60/168 (35%), Gaps = 9/168 (5%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ +K+ + +Q L ++ACNTA L +E++ P+I
Sbjct: 1 TKDPTTIKQFGLEALDFF-KPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILA 59
Query: 114 AAA--YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ I +L T AT++ N + + +++ + +EE
Sbjct: 60 IKRQVANKNAPILVLGTKATIQSNAYDNALKQQGY-LNGSHLATSLFVPLIEESILEG-- 116
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW 219
+ ++ + F + VI+L CTH+PLI
Sbjct: 117 --ELVETCMRYYFTPFKI-LPGVIILGCTHFPLIAQKIEGYFMEHFAL 161
>gi|118476501|ref|YP_893652.1| glutamate racemase [Bacillus thuringiensis str. Al Hakam]
gi|196046990|ref|ZP_03114210.1| glutamate racemase [Bacillus cereus 03BB108]
gi|225862818|ref|YP_002748196.1| glutamate racemase [Bacillus cereus 03BB102]
gi|229183175|ref|ZP_04310405.1| Glutamate racemase [Bacillus cereus BGSC 6E1]
gi|118415726|gb|ABK84145.1| glutamate racemase [Bacillus thuringiensis str. Al Hakam]
gi|196022219|gb|EDX60906.1| glutamate racemase [Bacillus cereus 03BB108]
gi|225789735|gb|ACO29952.1| glutamate racemase [Bacillus cereus 03BB102]
gi|228600314|gb|EEK57904.1| Glutamate racemase [Bacillus cereus BGSC 6E1]
Length = 80
Score = 70.4 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 7/63 (11%), Positives = 19/63 (30%)
Query: 208 VFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
+ ++ V + +++ A +L + H F +G +
Sbjct: 1 MIKKELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFTTGSALSFEHIAERWL 60
Query: 268 GLK 270
G +
Sbjct: 61 GYQ 63
>gi|301052505|ref|YP_003790716.1| glutamate racemase [Bacillus anthracis CI]
gi|300374674|gb|ADK03578.1| glutamate racemase [Bacillus cereus biovar anthracis str. CI]
Length = 80
Score = 70.0 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 7/63 (11%), Positives = 18/63 (28%)
Query: 208 VFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
+ ++ V + +++ A +L + H F +G +
Sbjct: 1 MIKRELGEDVTIISSAEETAIELSTILQHKGILADNLNPKHRFFTTGSALSFEHIAERWL 60
Query: 268 GLK 270
G
Sbjct: 61 GYH 63
>gi|157691918|ref|YP_001486380.1| aspartate racemase [Bacillus pumilus SAFR-032]
gi|157680676|gb|ABV61820.1| aspartate racemase [Bacillus pumilus SAFR-032]
Length = 232
Score = 70.0 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 43/252 (17%)
Query: 12 LQNSILIFDSGIGGL-IV--LQKMRFLMP------EYHFIYVADDVGFPYGNWEDHALKK 62
+ +I I G+G L + ++K+ P H I AD+ +P +
Sbjct: 1 MSTTIGIM-GGMGPLATIDLMKKIISHTPAIKDQDHLHVI--ADN--YP-------QIPD 48
Query: 63 RLMFLF-------------SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP 109
R +F + L++ +IACNTA +++ +ST + +
Sbjct: 49 RTNAIFGKGEDPTEYMIASAKRLERAGADFILIACNTAHFFLENVQQSTH--IPIMNMPL 106
Query: 110 AIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
+ + +L T TL+ +
Sbjct: 107 ETAKHLNKHHYTSVGLLCTDGTLKTKLYQKACAHHKIDVMTPSEELQKNVMNGIYAVKAG 166
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
K+ + E + + + + I+ CT PL++ + V +D + +A+
Sbjct: 167 KLSKGESELALASKI--LINQGAEAIIAGCTEIPLVLRSTKA-----VKVIDPTVILAKE 219
Query: 230 ARCLLPRINTHQ 241
A L+ +
Sbjct: 220 AVKLVYELEKLN 231
>gi|228919689|ref|ZP_04083051.1| Glutamate racemase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|228840043|gb|EEM85322.1| Glutamate racemase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
Length = 80
Score = 69.6 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 8/63 (12%), Positives = 18/63 (28%)
Query: 208 VFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
+ + V + +++ A +L + H F +G Q
Sbjct: 1 MIKSELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTGSVLSFEHIAEQWL 60
Query: 268 GLK 270
G +
Sbjct: 61 GYQ 63
>gi|194014592|ref|ZP_03053209.1| aspartate racemase [Bacillus pumilus ATCC 7061]
gi|194013618|gb|EDW23183.1| aspartate racemase [Bacillus pumilus ATCC 7061]
Length = 235
Score = 69.2 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 38/256 (14%), Positives = 80/256 (31%), Gaps = 43/256 (16%)
Query: 12 LQNSILIFDSGIGGL-IV--LQKMRFLMP------EYHFIYVADDVGFPYGNWEDHALKK 62
+ +I I G+G L + ++K+ P H I AD+ +P +
Sbjct: 1 MSTTIGIM-GGMGPLATIDLMKKIISHTPAIKDQDHIHVI--ADN--YP-------QIPD 48
Query: 63 RLMFLF-------------SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP 109
R +F + L++ +IACNTA +++ + +
Sbjct: 49 RTNAIFGKGEDPTDDMIASAKRLERAGADFILIACNTAHFFLENV--RHSTHIPIMNMPL 106
Query: 110 AIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
+ +L T TL+ + +
Sbjct: 107 ETANYLNKHHYTSVGLLCTDGTLKTQLYQRACAHHKIDVMTPSENLQKNVMNGIYAVKAG 166
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
K+ E E + + + + I+ CT PL++ ++ V +D + +A+
Sbjct: 167 KLSEGESELALAAEI--LINQGAEAIIAGCTEIPLVLRSTKE-----VKVIDPTVILAKE 219
Query: 230 ARCLLPRINTHQTRVF 245
A L+ + +
Sbjct: 220 AVKLVYELEKLNIKST 235
>gi|330819549|ref|YP_004348411.1| Aspartate racemase [Burkholderia gladioli BSR3]
gi|327371544|gb|AEA62899.1| Aspartate racemase [Burkholderia gladioli BSR3]
Length = 504
Score = 69.2 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/241 (16%), Positives = 76/241 (31%), Gaps = 42/241 (17%)
Query: 16 ILIFDSGIGGL----IV--LQKMRFLMPEYHFIYVADDVG----------FP------YG 53
I + +GG+ V L+K+ P D P G
Sbjct: 251 IGV----VGGVGPAATVDFLRKLVHHTPAAR-----DQDHLKLIVEQNPQIPDRTAHLVG 301
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
D + ++ L++ L I CNTA ++ S+ + + +
Sbjct: 302 EGPDPTV---SLYAACKRLEQGGAKLVAIPCNTAHAFVERI--QPRLSIPIVNMLTVTAR 356
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK- 170
++ I +L+T TL + + + + G+K
Sbjct: 357 HLRERFPEAREIGVLATSGTLASGVYREALAAEGFVQLVPPPALQARVMAAIYGEAGVKA 416
Query: 171 -IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP--VDWLDNSDSIA 227
+ +++IE V++L CT PL++ P V +D ++ +A
Sbjct: 417 GFVQGRCREDIEAALDALVAAGARVVLLGCTELPLLLPAGEIAGPGGARVSLVDPTEVLA 476
Query: 228 R 228
R
Sbjct: 477 R 477
Score = 46.1 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 33/183 (18%), Positives = 66/183 (36%), Gaps = 12/183 (6%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ E A +K +F ++ V+ C + T + DELR+ S+A + V A+++
Sbjct: 57 DREASAERKLHVFDLIREFEQRGVTTVVLPCFLSHTFL-DELRANT-SLAIVDLVEAVRE 114
Query: 114 AAAYTQS--GLISILSTPATLRRTYTSNLIHSY----VSQCHIHLVSSMILASRVEEYAC 167
I +L++ AT R + + + ++ A +
Sbjct: 115 HVRRAWPGARRIGVLASAATRERRLFERYFAAPEFSLCHPGEVDGIDAVTEAVYGVDGIR 174
Query: 168 GIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
+ + + + + +VIV T L++ L PV +D + A
Sbjct: 175 EGALDGRPV-ELLRRACASLIEQGAEVIVPGLTEIALVLDALGLL---PVPLVDPNQVYA 230
Query: 228 RRA 230
RR
Sbjct: 231 RRV 233
>gi|171315873|ref|ZP_02905103.1| aspartate racemase [Burkholderia ambifaria MEX-5]
gi|171098969|gb|EDT43757.1| aspartate racemase [Burkholderia ambifaria MEX-5]
Length = 500
Score = 69.2 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/241 (14%), Positives = 73/241 (30%), Gaps = 40/241 (16%)
Query: 15 SILIFDSGIGGL----IV--LQKMRFLMPEYHFIYVADDVGF----------PYGNWEDH 58
I + +GG+ V L K+ P D P + ++
Sbjct: 248 KIGV----VGGVGPAATVDFLDKIVRNTPAAR-----DQDHIKLLVEQNPQIP--DRTEN 296
Query: 59 AL-----KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ ++ L+ + I CNTA + E + + + +
Sbjct: 297 LVGGGADPTISLYATCKKLEDGDADVIAIPCNTAHAFV--EWIQPWLGIPIINMLTVTVA 354
Query: 114 AAAYTQS--GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK- 170
T + +L+T T++ + S + + G+K
Sbjct: 355 HLRDTYPALRQVGVLATSGTIQSGVYQKALESQGLRQVAPAPALQARVMEAIYGTHGVKA 414
Query: 171 -IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS--PWPVDWLDNSDSIA 227
+++I + VIVL CT P+++ ++ +D +D +A
Sbjct: 415 GFTTGRCEEDIGAAIDALMDEGVSVIVLGCTELPILLPGGEYVARNGRRATLVDPTDVLA 474
Query: 228 R 228
R
Sbjct: 475 R 475
>gi|218232186|ref|YP_002365636.1| glutamate racemase [Bacillus cereus B4264]
gi|229068519|ref|ZP_04201820.1| Glutamate racemase [Bacillus cereus F65185]
gi|229078168|ref|ZP_04210744.1| Glutamate racemase [Bacillus cereus Rock4-2]
gi|218160143|gb|ACK60135.1| glutamate racemase [Bacillus cereus B4264]
gi|228705138|gb|EEL57548.1| Glutamate racemase [Bacillus cereus Rock4-2]
gi|228714661|gb|EEL66535.1| Glutamate racemase [Bacillus cereus F65185]
Length = 80
Score = 68.5 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 7/63 (11%), Positives = 18/63 (28%)
Query: 208 VFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
+ + V + +++ A +L + H F +G +
Sbjct: 1 MIKSELGEDVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTGSVLSFEHIAERWL 60
Query: 268 GLK 270
G +
Sbjct: 61 GYQ 63
>gi|172065222|ref|YP_001815934.1| aspartate racemase [Burkholderia ambifaria MC40-6]
gi|171997464|gb|ACB68381.1| aspartate racemase [Burkholderia ambifaria MC40-6]
Length = 489
Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/172 (14%), Positives = 55/172 (31%), Gaps = 8/172 (4%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-- 120
++ L+ + I CNTA ++ + + + + T
Sbjct: 305 ISLYATCKKLEDGDADVIAIPCNTAHAFVERI--QPWLGIPIVNMLSVTVAHLRDTYPAL 362
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK--IKEDEIKK 178
+ +L+T T+ + S + + G+K ++
Sbjct: 363 REVGVLATSGTVESGVYRKALESQGLRQVAPAPALQARVMEAIYGPQGVKAGFTTGRCEE 422
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS--PWPVDWLDNSDSIAR 228
+I + VIVL CT P+++ ++ +D +D +AR
Sbjct: 423 DIGAAIDALMDEGVSVIVLGCTELPILLPGGEYVARNGRRATLVDPTDVLAR 474
>gi|7671531|emb|CAB89281.1| hypothetical protein [Clostridium cellulolyticum H10]
Length = 125
Score = 68.1 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Query: 147 QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIV 206
+ + L E + IKK+++G VL CTH+P+ +
Sbjct: 2 NHVVDYLPFPELVELAENMVFDYEKVIPVIKKKLDGY----NLNNYKTFVLGCTHFPIYI 57
Query: 207 HVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR-VFDDHALFLSG 254
+ F+++ P +D +D S+ R + LL + T + F SG
Sbjct: 58 NAFKEVLPPFIDIIDGSEGTIRYLKLLLEERHLISTNINGGNIVFFDSG 106
>gi|229089909|ref|ZP_04221164.1| Glutamate racemase [Bacillus cereus Rock3-42]
gi|228693534|gb|EEL47240.1| Glutamate racemase [Bacillus cereus Rock3-42]
Length = 80
Score = 68.1 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 7/63 (11%), Positives = 19/63 (30%)
Query: 208 VFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
+ ++ V + +++ A +L + +H F +G +
Sbjct: 1 MIKKELGEDVTIISSAEETAIELNTMLQHKGILSDNLNPEHRFFTTGSALSFEHIAERWL 60
Query: 268 GLK 270
G
Sbjct: 61 GYH 63
>gi|224826368|ref|ZP_03699470.1| aspartate racemase [Lutiella nitroferrum 2002]
gi|224601469|gb|EEG07650.1| aspartate racemase [Lutiella nitroferrum 2002]
Length = 476
Score = 67.3 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/176 (15%), Positives = 55/176 (31%), Gaps = 8/176 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSG 121
+ L+ I CNTA + + + + + Y+
Sbjct: 299 ALLATCQRLEADGAKAIAIPCNTAHAFVAAI--QPYLTTPIVNMLTETIAHIRTRYSGDK 356
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK--IKEDEIKKE 179
+ +L+T T++ + CG+K E E K +
Sbjct: 357 PVGLLATAGTVQSRVYHAAAEQAGIRLIAPEPPFQDKVMNAIYGECGVKAGFTEGESKTD 416
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS--PWPVDWLDNSDSIARRARCL 233
+ ++++L CT PL+ ++ V +D +D +ARR L
Sbjct: 417 LLAAAEHLAQAGAEILILGCTELPLLFPQSHEIELDGRTVALIDPTDILARRCVQL 472
>gi|228951342|ref|ZP_04113452.1| Glutamate racemase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|229189055|ref|ZP_04316083.1| Glutamate racemase [Bacillus cereus ATCC 10876]
gi|228594475|gb|EEK52266.1| Glutamate racemase [Bacillus cereus ATCC 10876]
gi|228808395|gb|EEM54904.1| Glutamate racemase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
Length = 80
Score = 66.9 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 7/63 (11%), Positives = 18/63 (28%)
Query: 208 VFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
+ + V + +++ A +L + H F +G +
Sbjct: 1 MIKSELGEAVTIISSAEETAIELSTILQHKGILSDNLNPKHRFFTTGSVLSFEHIAERWL 60
Query: 268 GLK 270
G +
Sbjct: 61 GYQ 63
>gi|169840381|ref|ZP_02873569.1| glutamate racemase [candidate division TM7 single-cell isolate
TM7a]
Length = 92
Score = 66.9 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 41/94 (43%), Gaps = 5/94 (5%)
Query: 111 IKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
+ A T++G I ++ T AT++ I + + + + + VEE K
Sbjct: 4 ARTAIEATKNGKIGVIGTKATIQSGKYEEEIKLFNKKVEVLQKACPLFVPAVEEGILSGK 63
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPL 204
+ + + I+ + +GK D ++L CTHY
Sbjct: 64 L----VNQIIKTYLDDFKGK-VDTLILGCTHYHY 92
>gi|170699320|ref|ZP_02890368.1| aspartate racemase [Burkholderia ambifaria IOP40-10]
gi|170135750|gb|EDT04030.1| aspartate racemase [Burkholderia ambifaria IOP40-10]
Length = 490
Score = 66.9 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/172 (14%), Positives = 55/172 (31%), Gaps = 8/172 (4%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-- 120
++ L+ + I CNTA ++ + + + + T
Sbjct: 306 ISLYATCKKLEDGDADVIAIPCNTAHAFVERI--QPWLGIPIVNMLTVTVAHLRDTYPAL 363
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK--IKEDEIKK 178
+ +L+T T+ + S + + + G+K ++
Sbjct: 364 REVGVLATSGTIESGVYRKALESQGLRQVAPAPALQARVMEAIYGSHGVKAGFTTGRCEE 423
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS--PWPVDWLDNSDSIAR 228
+I + VIVL CT P+++ + +D +D +AR
Sbjct: 424 DIGAAIDALMDEGVSVIVLGCTELPILLPGGEYVGRNGRRATLVDPTDVLAR 475
>gi|187921369|ref|YP_001890401.1| aspartate racemase [Burkholderia phytofirmans PsJN]
gi|187719807|gb|ACD21030.1| aspartate racemase [Burkholderia phytofirmans PsJN]
Length = 497
Score = 66.9 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 63/184 (34%), Gaps = 11/184 (5%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G+ D + ++ L+ L I CNTA ++ + S+ + +
Sbjct: 298 GDGPDPTI---SLYATCKKLESGDADLIAIPCNTAHAFVERI--QPYLSIPIVNMLTVTV 352
Query: 113 QAAAYTQS--GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
+ T + +L+T T+ + S + + G+K
Sbjct: 353 RHLRETYPALRSVGVLATSGTIASGVYEKALESEGLRQTVPRAELQARVMEAIYGNKGVK 412
Query: 171 --IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHV--FRQLSPWPVDWLDNSDSI 226
+ +I + +VI+L CT PL++ F + V +D +D +
Sbjct: 413 AGFTTGQCLDDISAAIDGLVAEGVEVIILGCTELPLLLPKQSFVGTTGARVSLVDPTDVL 472
Query: 227 ARRA 230
AR+
Sbjct: 473 ARQC 476
>gi|115360958|ref|YP_778095.1| aspartate racemase [Burkholderia ambifaria AMMD]
gi|115286286|gb|ABI91761.1| aspartate racemase [Burkholderia ambifaria AMMD]
Length = 484
Score = 66.5 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/172 (15%), Positives = 56/172 (32%), Gaps = 8/172 (4%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-- 120
++ L+ + I CNTA ++ + + + + T
Sbjct: 305 ISLYATCKKLEDGDADIIAIPCNTAHAFVERI--QPWLRIPIVNMLSVTVAHLRDTYPAL 362
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK--IKEDEIKK 178
+ +L+T T+ + S + + A G+K + ++
Sbjct: 363 QEVGVLATSGTIESGVYRKALESQGLRQVAPAPALQARVMEAIYGAQGVKAGFTTGQCEE 422
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS--PWPVDWLDNSDSIAR 228
+I + VIVL CT P+++ + +D +D +AR
Sbjct: 423 DIGAAIDALMDEGVSVIVLGCTELPILLPGDEYVGRNGRRATLVDPTDVLAR 474
>gi|295681452|ref|YP_003610026.1| aspartate racemase [Burkholderia sp. CCGE1002]
gi|295441347|gb|ADG20515.1| aspartate racemase [Burkholderia sp. CCGE1002]
Length = 488
Score = 66.5 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 63/184 (34%), Gaps = 11/184 (5%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G+ D + ++ L+ L I CNTA ++ + + + +
Sbjct: 301 GDGPDPTI---SLYATCKKLETGGADLIAIPCNTAHAFVERI--QPYLGVPIVNMLTVTV 355
Query: 113 QAAAYTQS--GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
+ + + +L+T TL + S + + + G+K
Sbjct: 356 RYLRESFPALRSVGVLATSGTLASGVYQKALESQGLRQVVPAPALQARVMDAIYGKAGVK 415
Query: 171 --IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLI--VHVFRQLSPWPVDWLDNSDSI 226
+ ++++ + +VIVL CT PL+ + V +D +D +
Sbjct: 416 AGFTAGQCQQDLAAAIDGLIAEGVEVIVLGCTELPLLLREPYVIGANGARVSIVDPTDVL 475
Query: 227 ARRA 230
A++
Sbjct: 476 AKQC 479
>gi|91782822|ref|YP_558028.1| aspartate racemase [Burkholderia xenovorans LB400]
gi|91686776|gb|ABE29976.1| Aspartate racemase [Burkholderia xenovorans LB400]
Length = 518
Score = 66.5 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/186 (15%), Positives = 57/186 (30%), Gaps = 9/186 (4%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QS 120
++ L+ L I CNTA ++ + + + T
Sbjct: 300 LALYAACRTLEDGGADLIAIPCNTAHAFVERI--QPSLGIPIVNMLTCTADYLRETFPGL 357
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK--IKEDEIKK 178
I +L+T TL + + + + G K E +
Sbjct: 358 REIGVLATTGTLASRVYEQSLEARGFVQIVPGEQAQARLMHAVYGPKGAKAGFTSGECRD 417
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHV--FRQLSPWPVDWLDNSDSIARRARCL-LP 235
++ + + VIVL CT PL++ + V +D ++ +A+R L
Sbjct: 418 DLAAAVDDLIAQGVQVIVLGCTELPLLLRDAALACAAGRVVRLVDPTEVLAKRCVAYALG 477
Query: 236 RINTHQ 241
+
Sbjct: 478 ERGAPR 483
>gi|42779389|ref|NP_976636.1| aspartate racemase [Bacillus cereus ATCC 10987]
gi|42735305|gb|AAS39244.1| aspartate racemase [Bacillus cereus ATCC 10987]
Length = 234
Score = 66.1 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 39/244 (15%), Positives = 71/244 (29%), Gaps = 43/244 (17%)
Query: 12 LQNSILIFDSGIGGL-IV--LQKMRFLMP------EYHFIYVADDVGFPYGNWEDHALKK 62
+Q + I G+G L V + K+ P H I AD+ Y +
Sbjct: 1 MQRVVGII-GGMGPLATVDLMNKIISYTPAMKDQDHIHII--ADN----Y-----SQIPD 48
Query: 63 RLMFLFSD-------------ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP 109
R + L VIACNTA K RS ++ L
Sbjct: 49 RTTAILGKGIDPTPYIVQSAQRLQNAGADFLVIACNTAHFFYKAVKRSV--NIPILHMPL 106
Query: 110 AIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
+ + +L+T T++ N Y
Sbjct: 107 ETARFVQENNFRKVGLLATDGTVKAELYQNSCQDYRIDVIDPDKEMQKKVMEGIYAIKSG 166
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
+K + + + + + I+ CT PL++ + +D ++ +A+
Sbjct: 167 DLKTGCLHLSMVA--DKLKESGAEAIIAGCTEVPLVLKS-----SENICVIDPTEIVAKV 219
Query: 230 ARCL 233
+
Sbjct: 220 VIKI 223
>gi|209518824|ref|ZP_03267637.1| aspartate racemase [Burkholderia sp. H160]
gi|209500709|gb|EEA00752.1| aspartate racemase [Burkholderia sp. H160]
Length = 486
Score = 65.8 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 22/176 (12%), Positives = 56/176 (31%), Gaps = 8/176 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSG 121
++ L+ + I CNTA + + + + + + +
Sbjct: 306 SLYATCKKLEDGGADIIAIPCNTAHAFVDRI--QPYLGIPIVNMLTVTVRYLRDSFPGLR 363
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK--IKEDEIKKE 179
+L+T T+ + S + G+K + +++
Sbjct: 364 DFGVLATSGTIGSGVYQKALESQGLHQIAPGAALQARVMDAIYGNNGVKAGFTTGQCQED 423
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS--PWPVDWLDNSDSIARRARCL 233
I + +V++L CT P+++ + V +D ++ +AR+
Sbjct: 424 IIAAVEGLIAEGVEVVLLGCTELPILLPAGEFVGRNGGRVQLVDPTEVLARQCIAY 479
>gi|303257154|ref|ZP_07343168.1| putative aspartate racemase [Burkholderiales bacterium 1_1_47]
gi|302860645|gb|EFL83722.1| putative aspartate racemase [Burkholderiales bacterium 1_1_47]
Length = 484
Score = 65.4 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 39/245 (15%), Positives = 72/245 (29%), Gaps = 37/245 (15%)
Query: 15 SILIFDSGIGGL----IV--LQKMRFLMPEYHFIYVADDVGF----------PYGNWEDH 58
I I +GGL V K+ P + D P + +
Sbjct: 240 KIGI----VGGLGPAATVDLYDKITKATPAKN-----DQEHIKVAVEQNPQIP--DRTKY 288
Query: 59 ALK-----KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
L ++ L+K VIACNTA + + + + V +
Sbjct: 289 LLHGGVDPTLSLYAACRKLEKDAVDAIVIACNTAHAYFETIVPHLSVPLINMQQVTLEEI 348
Query: 114 AAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIK 170
+ +I +++T T+ S + + E+
Sbjct: 349 RDKFGPDVVIGLMATDGTIETGIYGRKAKSMKLAMVVPDKEHQAMVMEAIYGEKGVKAGF 408
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR--QLSPWPVDWLDNSDSIAR 228
+ ++ K ++L CT PLI+ +L +D + S+AR
Sbjct: 409 TDGHCKEVLLKAAEHLVRDKGAQALILGCTELPLILEETDNIKLGDGHAAIVDPTASLAR 468
Query: 229 RARCL 233
R +
Sbjct: 469 RVVKV 473
>gi|56697504|ref|YP_167872.1| aspartate racemase, putative [Ruegeria pomeroyi DSS-3]
gi|56679241|gb|AAV95907.1| aspartate racemase, putative [Ruegeria pomeroyi DSS-3]
Length = 485
Score = 65.4 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 25/172 (14%), Positives = 58/172 (33%), Gaps = 6/172 (3%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
++ L++ I CNTA + ++ + + A A + + G
Sbjct: 303 LALYATCKKLERAGAQAIAIPCNTAHAFVDRIQKNLDIPIISILTETARFIGALHPEIGK 362
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK--IKEDEIKKEI 180
+++L+T T++ + + + + V G+K ++
Sbjct: 363 VAVLATSGTIQSGLYQSALRDQGLDPVLPDAGMQEMVMEVIYGPSGVKAGFTTGRCAAQL 422
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232
G+ +L CT PL+ +P + +D ++ +AR
Sbjct: 423 AQVIAAMTGQGAQAAILGCTELPLVHLP----APAAIRLIDPTEVLARACVQ 470
>gi|331000797|ref|ZP_08324443.1| aspartate racemase [Parasutterella excrementihominis YIT 11859]
gi|329570325|gb|EGG52058.1| aspartate racemase [Parasutterella excrementihominis YIT 11859]
Length = 484
Score = 65.0 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/245 (15%), Positives = 72/245 (29%), Gaps = 37/245 (15%)
Query: 15 SILIFDSGIGGL----IV--LQKMRFLMPEYHFIYVADDVGF----------PYGNWEDH 58
I I +GGL V K+ P + D P + +
Sbjct: 240 KIGI----VGGLGPAATVDLYDKITKATPAKN-----DQEHIKVAVEQNPQIP--DRTKY 288
Query: 59 ALK-----KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
L ++ L+K VIACNTA + + + + V +
Sbjct: 289 LLHGGVDPTLSLYAACRKLEKDAVDAIVIACNTAHAYFETIVPHLSVPLINMQQVTLEEI 348
Query: 114 AAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV---EEYACGIK 170
+ +I +++T T+ S + + E+
Sbjct: 349 RDRFGPDVVIGLMATDGTIETGIYGRKAKSMKLAMVVPDKEHQAMVMEAIYGEKGVKAGF 408
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR--QLSPWPVDWLDNSDSIAR 228
+ ++ K ++L CT PLI+ +L +D + S+AR
Sbjct: 409 TDGHCKEVLLKAAEHLVRDKGAQALILGCTELPLILEETDNIKLGDGHAAIVDPTASLAR 468
Query: 229 RARCL 233
R +
Sbjct: 469 RVVKV 473
>gi|326318025|ref|YP_004235697.1| aspartate racemase [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323374861|gb|ADX47130.1| aspartate racemase [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 263
Score = 65.0 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 51/171 (29%), Gaps = 9/171 (5%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
+ + L IACNTA L+ FP ++ L + +
Sbjct: 85 ALLQATGRLAALGARAVAIACNTAHA-WHRLLQERFPQLSVLHMPREVAALLHAQGRRRV 143
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMI--LASRVEEYACGIKIKEDEIKKEIE 181
+L+T T R + C + + E G + E+
Sbjct: 144 GLLATQGTYRSGLYRRALEQAGIDCLEPDEAGRERLMQGIYEGVKAGDMALARQCFSEVA 203
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232
++ +VIV+ CT PL + + LD + +A
Sbjct: 204 QAL--RDAGGAEVIVMGCTEIPLALDE----AGAGAALLDPARVLADALAR 248
>gi|28210540|ref|NP_781484.1| aspartate racemase [Clostridium tetani E88]
gi|28202977|gb|AAO35421.1| aspartate racemase [Clostridium tetani E88]
Length = 231
Score = 65.0 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 47/167 (28%), Gaps = 4/167 (2%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ L ++ CNTA DEL K + +L+T
Sbjct: 69 ERLKNAGADFLIMPCNTAH-YFYDELYEKLNMPFINMIEEVGKYIVTKHGKIKVGLLATL 127
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T + I S + + K+ E
Sbjct: 128 GTYQGKIYERYCKELGLDIIIPSKEVRQKVSDAVYIVKSGQ--RNFTKEFAMDMLKEFNE 185
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
K + ++L CT PLI +++ ++D +A+ + +
Sbjct: 186 KDVNAVILGCTELPLIFQPLENDL-KDFEFISSTDILAKETIKRVKK 231
>gi|229164447|ref|ZP_04292374.1| Aspartate racemase [Bacillus cereus R309803]
gi|228619020|gb|EEK75919.1| Aspartate racemase [Bacillus cereus R309803]
Length = 238
Score = 65.0 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/245 (15%), Positives = 73/245 (29%), Gaps = 43/245 (17%)
Query: 11 KLQNSILIFDSGIGGL-IV--LQKMRFLMP------EYHFIYVADDVGFPYGNWEDHALK 61
K+Q + I G+G L V + K+ P H I AD+ Y +
Sbjct: 4 KMQRVVGII-GGMGPLATVDLMNKIISYTPAMKDQDHIHII--ADN----Y-----SQIP 51
Query: 62 KRLMFLFSD-------------ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV 108
R + L VIACNTA K RS ++ L
Sbjct: 52 DRTTAILGKGIDPTPYIVQSAQRLQNAGADFLVIACNTAHFFYKAVKRSV--NIPILHMP 109
Query: 109 PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG 168
+ + +L+T T++ N + +
Sbjct: 110 LETARFVQENNFRKVGLLATDGTIKTELYQNSCQNCRIDVIEPDKEMQKKVMKGIYAIKS 169
Query: 169 IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+K + + + + + I+ CT PL++ + ++ ++ +A+
Sbjct: 170 GNLKTGCL--YLSMVADKLKESGAEAIIAGCTEVPLVLKS-----SKNICVINPTEIVAK 222
Query: 229 RARCL 233
+
Sbjct: 223 VVIKI 227
>gi|325123649|gb|ADY83172.1| putative aspartate racemase [Acinetobacter calcoaceticus PHEA-2]
Length = 236
Score = 64.2 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/236 (16%), Positives = 75/236 (31%), Gaps = 34/236 (14%)
Query: 12 LQNSILIFDSGIGGL----IV--LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
+ +I I +GG+ + + K+ P + D P + R
Sbjct: 1 MNKAIGI----LGGMGPQATIDAMNKIIRNTPAH-----CDQEHIPVVTVSIPDIPDRTQ 51
Query: 66 FLFS-------------DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
+ + IL+ Q +I CNTA ++L+ + A+
Sbjct: 52 AIINQDNKPLEKMAEYLKILEAAQVGCIIIPCNTAH-FWFNQLQKRTQTKMISIVESAV- 109
Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172
+Q + IL+T AT+ + + I
Sbjct: 110 HFIQDSQIDEVCILATSATINTELYQSQFIENSIGFSTPSAEMQNKVMQSIYQYKAGNI- 168
Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+ ++ ++ KR +LACT PLI+ + P ++D +D + +
Sbjct: 169 -QQAREMMKEVINFYTNKRNIKFLLACTEIPLILEESIEAYPE--LFIDTTDVLIK 221
>gi|330808542|ref|YP_004353004.1| bifunctional protein: aspartate racemase; glutamate racemase
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|327376650|gb|AEA68000.1| Putative bifunctional protein: aspartate racemase; glutamate
racemase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 486
Score = 63.8 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/182 (16%), Positives = 61/182 (33%), Gaps = 6/182 (3%)
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL-ISI 125
L+ I CNTA + + +++ ++ A SG I +
Sbjct: 302 AACKRLESAGANAIAIPCNTAHAFV-ERIQAHLRVPIVNMLSETVEWIARTYGSGKAIGL 360
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK--IKEDEIKKEIEGC 183
L+T T++ Q V + GIK + K+++
Sbjct: 361 LATSGTVQSQVYHQAARQAGLQVLTPGVDYQAMVMDAIYGPRGIKAGFTQGLCKEQLLLA 420
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFR--QLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
V++L CT PL++ +++ V +D + +A+R L +
Sbjct: 421 AEHLCELGAGVLILGCTELPLVLAHCEAFEINGHRVALVDPTMILAQRCVALAQKAPLSG 480
Query: 242 TR 243
++
Sbjct: 481 SK 482
>gi|261414956|ref|YP_003248639.1| aspartate racemase [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|261371412|gb|ACX74157.1| aspartate racemase [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|302325824|gb|ADL25025.1| aspartate racemase family protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 229
Score = 63.8 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/169 (13%), Positives = 57/169 (33%), Gaps = 6/169 (3%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L+ VIA NT L+ R + L A + +
Sbjct: 63 ILADAAKRLECAGADFIVIATNTMHKLVPQIEREIH--IPILHIADAAATSVIRDGFTKV 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
++L T T+ + + + + + + + + + V + D + E +
Sbjct: 121 ALLGTKFTMTQDFIKDRLKGAGLEVIVPDAPDIEIVNNVIFNELCLGKVLDASRAEYQRI 180
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232
+ + + ++L CT +++ + P D + A+ A
Sbjct: 181 IESLKERGAECVILGCTEIGMLISAEDSVLP----VYDTTIIHAKEAAR 225
>gi|240103398|ref|YP_002959707.1| Aspartate racemase (racD) [Thermococcus gammatolerans EJ3]
gi|239910952|gb|ACS33843.1| Aspartate racemase (racD) [Thermococcus gammatolerans EJ3]
Length = 234
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/245 (16%), Positives = 76/245 (31%), Gaps = 44/245 (17%)
Query: 12 LQNSILIFDSGIGGLIVL---QKMRFLMPEYH-------FIYVADDVGFPYGNWEDHALK 61
++ +I I G+G L +++ P IY P +
Sbjct: 1 MERTIGIL-GGMGPLATAELFRRIVEKTPAKRDQDHPRIIIY-----NNP-------KIP 47
Query: 62 KRLMFLF-------------SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV 108
R F+ + L+ + ++ CNTA R+ + + +
Sbjct: 48 DRTAFILGRGPDPRPELIDSAKKLESWGADFIIMPCNTAHFFADTIQRAIR--IPLVSMI 105
Query: 109 PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG 168
+ +L+T T++ + + L + G
Sbjct: 106 EETAERVKGMGLRKAGLLATDGTIKGLIYHRALLKRGVSIAVPGKKDQRLVMKAIY--EG 163
Query: 169 IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
IK E+ +E+ K +R+DVI+ CT + + V +D D IA
Sbjct: 164 IKAGNLELGRELLLKVAGKLQRRSDVIIAGCTEVSVALKP----EDLSVPLIDPLDVIAE 219
Query: 229 RARCL 233
+A L
Sbjct: 220 KAVKL 224
>gi|50083589|ref|YP_045099.1| putative aspartate racemase [Acinetobacter sp. ADP1]
gi|49529565|emb|CAG67277.1| putative aspartate racemase [Acinetobacter sp. ADP1]
Length = 236
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/236 (16%), Positives = 79/236 (33%), Gaps = 34/236 (14%)
Query: 12 LQNSILIFDSGIGGL----IV--LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
+ +I I +GG+ V + K+ + D P + R
Sbjct: 1 MHKAIGI----LGGMGPQATVDAMNKIIKNTSAHS-----DQEHIPVIIVSIPDIPDRTK 51
Query: 66 FLFSDILDKYQPV-------------LSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
+ + ++ + +I CNTA D+L+ + + + A
Sbjct: 52 SIINHDDKPFEKMREYLKILENANVGCIIIPCNTAH-FWFDQLQQQTHTK-MISIIEATV 109
Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172
+ + + I IL+T AT+ + ++ + + + L + I
Sbjct: 110 RFIQKSNAQEICILATSATINTELYQKELANHQIKFTLPELEIQQLVMQSIYSYKSGNI- 168
Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+E K + E +LACT PLI+ + P ++D +D + R
Sbjct: 169 -EEAKNIMINIINLYEYNPARKFLLACTEIPLILE--DWIIEKPELFIDATDVLIR 221
>gi|57640439|ref|YP_182917.1| aspartate racemase [Thermococcus kodakarensis KOD1]
gi|57158763|dbj|BAD84693.1| aspartate racemase [Thermococcus kodakarensis KOD1]
Length = 232
Score = 63.1 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/244 (15%), Positives = 78/244 (31%), Gaps = 44/244 (18%)
Query: 13 QNSILIFDSGIGGLIVL---QKMRFLMPEYH-------FIYVADDVGFPYGNWEDHALKK 62
+ I I G+G L +++ P IY P +
Sbjct: 3 ERVIGIL-GGMGPLATADLFRRIVERTPARRDQDHPRIIIY-----NNP-------KIPD 49
Query: 63 RLMFLF-------------SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP 109
R F+ + L+ + ++ CNTA + R+ ++ + +
Sbjct: 50 RTAFILGNGPDPRPELIASAKKLESWGADFIIMPCNTAHFFAETIQRAI--NIPLVSMIE 107
Query: 110 AIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
+ + +L+T T++ + + L + G+
Sbjct: 108 ETAKKIESMGLRKVGLLATDGTIKGMVYHRALLKRGIHIAVPNKKDQGLVMKAIY--EGV 165
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
K E+ +E+ +K +R++ I+ CT +++ V +D D IA R
Sbjct: 166 KAGNLELGRELLLKVAKKLERRSEGIIAGCTEVSVVLKS----EDLNVPLIDPMDVIAER 221
Query: 230 ARCL 233
A L
Sbjct: 222 AVKL 225
>gi|304440381|ref|ZP_07400270.1| Asp/Glu/Hydantoin family racemase [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304371133|gb|EFM24750.1| Asp/Glu/Hydantoin family racemase [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 215
Score = 63.1 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/173 (14%), Positives = 61/173 (35%), Gaps = 7/173 (4%)
Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA 115
L + D + + + + + + LR T
Sbjct: 46 SVEELTNIVKEKIEDAKENGAEKIFIYCNSLSVAIDLKYLRETTGMEIITPID---VYKN 102
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
+ I+I++ A + + + I +I + ++ L +E+ +I +
Sbjct: 103 LDKKYKNIAIIA--ANSKSAFKIDQILCEEEFRNIVAIGNLTLVEAIEDKLNPEEIIKLL 160
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
++ F + ++ D+I+L CTH+P I +L+ + LD + + +
Sbjct: 161 ALDKLADYFNNIKREKLDLIILGCTHFPYIKEELERLT--DIKILDPAAEMIK 211
>gi|296159354|ref|ZP_06842179.1| aspartate racemase [Burkholderia sp. Ch1-1]
gi|295890338|gb|EFG70131.1| aspartate racemase [Burkholderia sp. Ch1-1]
Length = 503
Score = 62.7 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/177 (15%), Positives = 54/177 (30%), Gaps = 8/177 (4%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QS 120
++ L+ L I CNTA ++ + + + T
Sbjct: 300 LALYAACRTLEDGGADLIAIPCNTAHAFVERI--QPSLGIPIVNMLTCTADYLRETFPGL 357
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK--IKEDEIKK 178
+ +L+T TL + + + G K E
Sbjct: 358 REVGVLATTGTLASRVYEQSLEARGFVQIAPGEQAQARLMHAVYGPKGAKAGFTSGECCD 417
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVH--VFRQLSPWPVDWLDNSDSIARRARCL 233
++ + + VIVL CT PL++ + + V +D ++ +A+R
Sbjct: 418 DLAAAVDDLIAQGVQVIVLGCTELPLLLRDAMLACAAGRVVRLVDPTEVLAKRCVAY 474
>gi|171321276|ref|ZP_02910240.1| aspartate racemase [Burkholderia ambifaria MEX-5]
gi|171093448|gb|EDT38627.1| aspartate racemase [Burkholderia ambifaria MEX-5]
Length = 233
Score = 62.7 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 37/239 (15%), Positives = 70/239 (29%), Gaps = 30/239 (12%)
Query: 16 ILIFDSGIGGL-IV--LQKMRFLMPEYHFIYVADDVGFPYG----NWEDHALKKRLMFLF 68
I + G+G L V + ++ L D P ++ +
Sbjct: 4 IGVL-GGMGPLATVDFMHRVIRLTRAR-----CDQEHLPMIVANLTQTPDRVRAIVDGGT 57
Query: 69 S---------DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119
+L++ + I CNTA LR ++ L V A A
Sbjct: 58 DPLPALLDGVALLNRCGVDVIAIPCNTAH-HWYAPLRER-SAVPILHIVDASVAALPA-G 114
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+++L+T TL + + + + V++ KI +
Sbjct: 115 LRRVAVLATGGTLVSGLYQAALRARGFEPVMPGVAAQRDIVACIAAVKAGKIDASA--RC 172
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+ + V V+ CT P+ R P +D++ +AR
Sbjct: 173 LTRALATLARRDVGVAVMGCTEIPIAARALRDA---PFALIDSTQELARATVAYAAERG 228
>gi|269138277|ref|YP_003294977.1| putative aspartate racemase [Edwardsiella tarda EIB202]
gi|267983937|gb|ACY83766.1| putative aspartate racemase [Edwardsiella tarda EIB202]
gi|304558313|gb|ADM40977.1| Putative aspartate racemase [Edwardsiella tarda FL6-60]
Length = 239
Score = 62.3 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/159 (20%), Positives = 59/159 (37%), Gaps = 6/159 (3%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L++ VI CNTA DELR + + L V A + I +L+T
Sbjct: 69 QRLEQAGAECIVIPCNTAH-FWFDELRQSC-HVELLNIVEATLNEVCASGQHHIGLLATN 126
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
ATL I ++ +C + ++ +E
Sbjct: 127 ATLYMGLYQQAIEAHGLRCIAPDREGQEQVMESIYALKAG--DAEHARRLMERQADALFA 184
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+ +IVL CT P+I+ ++ P +++++ ++ R
Sbjct: 185 RGAQIIVLGCTEVPVILAEAQRAQPE--RYIESTGALVR 221
>gi|170703014|ref|ZP_02893844.1| aspartate racemase [Burkholderia ambifaria IOP40-10]
gi|170132072|gb|EDT00570.1| aspartate racemase [Burkholderia ambifaria IOP40-10]
Length = 233
Score = 62.3 bits (150), Expect = 8e-08, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 55/167 (32%), Gaps = 8/167 (4%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L++ + I CN+A LR + L V A A +++L+T T
Sbjct: 70 LNRCGVDVIAIPCNSAH-HWYAPLRERSAA-PVLHIVDASVAAVPA-GVRRVAVLATGGT 126
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L + + + + + V++ + KI + + +
Sbjct: 127 LVSGFYQAALRARGFEPVMPAVAAQRDIAACIAAVKAGKIDASVRR--LSRALATLARRD 184
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
V V+ CT PL V R P +D++ +AR
Sbjct: 185 VGVAVMGCTEIPLAARVLRDA---PFALIDSTQELARATVAYAAERG 228
>gi|172063017|ref|YP_001810668.1| aspartate racemase [Burkholderia ambifaria MC40-6]
gi|171995534|gb|ACB66452.1| aspartate racemase [Burkholderia ambifaria MC40-6]
Length = 233
Score = 61.9 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 27/167 (16%), Positives = 54/167 (32%), Gaps = 8/167 (4%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L++ + I CN+A LR + L V A A +++L+T T
Sbjct: 70 LNRCGVDVIAIPCNSAH-HWYAPLRECSAA-PVLHIVDASVAAVPA-GVRRVAVLATGGT 126
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L + + + + + V++ + K+ + + +
Sbjct: 127 LVSGFYQAALRARGFEPVMPAVTAQRDIAACIAAVKAGKVDASVRR--LSRALATLARRD 184
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
V V+ CT P+ R P +D++ +AR
Sbjct: 185 VGVAVMGCTEIPIAARALRDA---PFALIDSTQELARATVAYAAERG 228
>gi|188585267|ref|YP_001916812.1| aspartate racemase [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179349954|gb|ACB84224.1| aspartate racemase [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 244
Score = 61.9 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/187 (13%), Positives = 62/187 (33%), Gaps = 13/187 (6%)
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY-----TQ 119
+ + L+ V+ CNTA KD ++ F+ + + ++
Sbjct: 65 LRDMAKRLENMGADFLVMPCNTAHYFYKDI--QDVVNIPFVNMLECTARYINKLIGNDSK 122
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
G + +L+T TL+ N + + + ++ + G ++
Sbjct: 123 QGKVGLLATSGTLQTEIYQNQLSQFGFEVITPEPYQQLVMEAIYAVKAGDIGTS--TREL 180
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLLPRIN 238
+E + E I++ CT P+I + + +D ++ +A L +
Sbjct: 181 LEKPIKQLENNGAKAIIMGCTEIPVIATTEQT---TQAELIDPTEVLADETVSRALKTGD 237
Query: 239 THQTRVF 245
+
Sbjct: 238 KLEIGKN 244
>gi|115358254|ref|YP_775392.1| aspartate racemase [Burkholderia ambifaria AMMD]
gi|115283542|gb|ABI89058.1| aspartate racemase [Burkholderia ambifaria AMMD]
Length = 233
Score = 61.9 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 54/167 (32%), Gaps = 8/167 (4%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L++ + I CN+A LR + L V A A +++L+T T
Sbjct: 70 LNRCGVDVIAIPCNSAH-HWYAPLRERSAA-PVLHIVDASVAAVPA-GVRRVAVLATGGT 126
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L + + + + + V++ + KI + + +
Sbjct: 127 LVSGFYQAALRARGFEPVMPAVAAQRDIAACIAAVKAGKIDASVRR--LSRALATLARRD 184
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
V V+ CT P+ R P +D++ +AR
Sbjct: 185 VGVAVMGCTEIPIAARALRDA---PFALIDSTQELARATVAYAAERG 228
>gi|319942626|ref|ZP_08016934.1| hypothetical protein HMPREF9464_02153 [Sutterella wadsworthensis
3_1_45B]
gi|319803805|gb|EFW00737.1| hypothetical protein HMPREF9464_02153 [Sutterella wadsworthensis
3_1_45B]
Length = 479
Score = 61.1 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/177 (14%), Positives = 57/177 (32%), Gaps = 9/177 (5%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAI--KQAAAYTQS 120
+F + L+ ++ CNTA + R F + F+ A +
Sbjct: 293 LALFHCAQRLEADGCSTLIVPCNTAHAFLPYLER--FIKIPFINMQQAALDEIQNKLGTR 350
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG---IKIKEDEIK 177
I +L+T T++ + ++ + G +
Sbjct: 351 AKIGLLATTGTVQTGIYGDKANAMGLPMFVPDDVHQERVMAAIYGPQGAKAGYTNGICRE 410
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFR--QLSPWPVDWLDNSDSIARRARC 232
I + + ++L CT PLI+ +++ V +D + ++AR+
Sbjct: 411 DLISAAEYLVKTHGCNCLILGCTELPLILDESDDFEVAGSRVIVVDPTAALARKVVK 467
>gi|254173678|ref|ZP_04880350.1| aspartate racemase [Thermococcus sp. AM4]
gi|214032370|gb|EEB73200.1| aspartate racemase [Thermococcus sp. AM4]
Length = 234
Score = 61.1 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/245 (16%), Positives = 78/245 (31%), Gaps = 44/245 (17%)
Query: 12 LQNSILIFDSGIGGLIVL---QKMRFLMPEYH-------FIYVADDVGFPYGNWEDHALK 61
++ +I I G+G L +++ P IY P +
Sbjct: 1 MERTIGIL-GGMGPLATAELFRRIVVKTPAKRDQDHPRIIIY-----NNP-------KIP 47
Query: 62 KRLMFLF-------------SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV 108
R F+ + L+ + ++ CNTA + R+ + + V
Sbjct: 48 DRTAFILGKGPDPRPELIDSAKKLESWGADFIIMPCNTAHFFAETIQRAIR--IPLVSMV 105
Query: 109 PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG 168
+ + +L+T T++ + + + L R G
Sbjct: 106 EETAERVKEMGLRKVGLLATDGTVKGLVYHRALLKRGISIAVPGKNDQRLVMRGIY--EG 163
Query: 169 IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+K E+ +E+ +K KR + I+ CT + + V +D D IA
Sbjct: 164 VKAGNLELGRELLLKVAKKLEKRVEGIIAGCTEVSVALRP----EDLSVPLIDPMDVIAE 219
Query: 229 RARCL 233
+A L
Sbjct: 220 KAVKL 224
>gi|296129577|ref|YP_003636827.1| aspartate racemase [Cellulomonas flavigena DSM 20109]
gi|296021392|gb|ADG74628.1| aspartate racemase [Cellulomonas flavigena DSM 20109]
Length = 244
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 55/170 (32%), Gaps = 5/170 (2%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
+M + L++ V+ CNTA DE+ + + + AA +
Sbjct: 74 VMAADARRLERLGVGFVVVPCNTAH-HFTDEVAAAVDVPVLSIVDETVDEVAARPGVARV 132
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L+T TL I + + + + + + D +
Sbjct: 133 GVLATSGTLAARVYQRAIEARGLEAVVPDDADQDVVMGIIYDQVKAGRPADV--AALHAV 190
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+ DV+VL CT ++ ++D+ D +ARR
Sbjct: 191 ADRLRERGADVVVLGCTELSVVAA--EHRLLDDARYVDSLDVLARRTVER 238
>gi|269836715|ref|YP_003318943.1| aspartate racemase [Sphaerobacter thermophilus DSM 20745]
gi|269785978|gb|ACZ38121.1| aspartate racemase [Sphaerobacter thermophilus DSM 20745]
Length = 247
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/255 (16%), Positives = 82/255 (32%), Gaps = 24/255 (9%)
Query: 10 KKLQNSILIFDSGIGGLI---VLQKMRFLMP------EYHFIYVADDVGFPYGNWEDHAL 60
+ +I + G+G L + +K+ P H I AD P + + L
Sbjct: 1 MTTKRTIGVL-GGMGPLATADLYRKIIEATPARRDQDHLHVIIDADP-SVP--DRTEALL 56
Query: 61 K---KRLMFLFS--DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA 115
+L + L+ VI CNTA + + + + A + AA
Sbjct: 57 HGGPDPTPWLIAGAQRLEGAGASFIVIPCNTAHAFLGAVRDAVAIPIISMIDETAAEVAA 116
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
+ IL+T T+ + + + + + + +
Sbjct: 117 LLPRGAAAGILATSGTVSAGLYQDALAAAGLRALVPSPDAQAQVMAAIAAVKAGDLSRAT 176
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR-RARCLL 234
+K + + E + ++ ACT PLI+ PV +D + +AR R L
Sbjct: 177 TEKALVAAY-ELIEQGAGALLAACTELPLILQPNDI----PVPLIDPTAVLARAAVREAL 231
Query: 235 PRINTHQTRVFDDHA 249
+ + D
Sbjct: 232 AARSLPEGVTPDAIR 246
>gi|315230092|ref|YP_004070528.1| aspartate racemase [Thermococcus barophilus MP]
gi|315183120|gb|ADT83305.1| aspartate racemase [Thermococcus barophilus MP]
Length = 230
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 57/165 (34%), Gaps = 8/165 (4%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + ++ CNTA + R+ ++ + + + + +L+T
Sbjct: 70 AKKLESWGADFIIMPCNTAHFFADEIQRAI--NIPLINMIEETAEYVKQLGIKRVGLLAT 127
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+ + + I R GIK + E +E+ +K
Sbjct: 128 TGTVVSGIYQRALEKKGIKVIIPNKEEQENVMRGIY--EGIKANKFEFGRELLLEIAKKL 185
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
K ++ I+ CT + + V +D D IA +A L
Sbjct: 186 EKESEGIIAGCTEVSVALKP----EDLEVPLIDPMDVIAEKAVKL 226
>gi|332756371|gb|EGJ86722.1| hypothetical protein SF274771_2972 [Shigella flexneri 2747-71]
gi|333016336|gb|EGK35667.1| hypothetical protein SFK304_3259 [Shigella flexneri K-304]
Length = 42
Score = 60.4 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 9/42 (21%), Positives = 18/42 (42%)
Query: 26 LIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ ++++ L+P IY D++ PYGN +
Sbjct: 1 MTSVKEIINLLPGEDIIYCGDNMNAPYGNRSADDIISLTKKC 42
>gi|332158923|ref|YP_004424202.1| aspartate racemase [Pyrococcus sp. NA2]
gi|331034386|gb|AEC52198.1| aspartate racemase [Pyrococcus sp. NA2]
Length = 228
Score = 60.4 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/243 (15%), Positives = 73/243 (30%), Gaps = 43/243 (17%)
Query: 14 NSILIFDSGIGGLIVL---QKMRFLMPEYHFIYVADDVG----------FP----Y---- 52
I I G+G L +++ P D P Y
Sbjct: 2 RVIGIL-GGMGPLATADLFRRIVEKTPAEK-----DQDHPKIIIFNNPQIPDRTAYILGK 55
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G L + L++ V+ CNTA I+D + + +
Sbjct: 56 GEDPRPQLI-----WTAKKLEECGADFIVMPCNTAHAFIEDI--RKSVKIPVISMIEETA 108
Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172
+ + +++T T+ N ++ + L S V +
Sbjct: 109 KRVKDEGCKKVGLIATTGTIVSKVYHNELNKLGIE---VLTPSEHEQDEVMKGIYQGVKA 165
Query: 173 E--DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ +K + G + E + D I+ CT ++++ ++ +D D IA A
Sbjct: 166 GNLELGRKILLGIAKKLEERGADCIIAGCTEVSVVIN--QEDL--KAKLIDPMDIIAEVA 221
Query: 231 RCL 233
L
Sbjct: 222 VKL 224
>gi|317121724|ref|YP_004101727.1| aspartate racemase [Thermaerobacter marianensis DSM 12885]
gi|315591704|gb|ADU51000.1| aspartate racemase [Thermaerobacter marianensis DSM 12885]
Length = 296
Score = 60.4 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/174 (18%), Positives = 59/174 (33%), Gaps = 14/174 (8%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ-------AAAYTQSGL 122
L L +I CNTA + D L++ P + AA G
Sbjct: 119 RGLVSLGATLILIPCNTAH-VYFDRLQAESPVPILHIMREVARALAPGGDPAAGLAAGGP 177
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK-EDEIKKEIE 181
+ +L+T T+ + Q + + +R GIK ++ +
Sbjct: 178 VGLLATELTVASGLYHRALAEVGLQVLVPEPAYQAQVTRAIFGPDGIKAGVYGPARQRLL 237
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR-RARCLL 234
+ V++ CT PL++ PV W+D ++ +AR +L
Sbjct: 238 EAGAHLVERGARVLIAGCTELPLVLRPGDF----PVPWVDPAEILARAALARVL 287
>gi|319784854|ref|YP_004144330.1| aspartate racemase [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317170742|gb|ADV14280.1| aspartate racemase [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 265
Score = 60.4 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/224 (12%), Positives = 63/224 (28%), Gaps = 24/224 (10%)
Query: 44 VADDVGFPYGNWEDHALKKRLMFLFSDI-------------LDKYQPVLSVIACNTAFTL 90
D+ P L R + + L+ + CNTA
Sbjct: 35 FRDNEHVPAVILSIPQLPDRTEAILAGHDGPLAPLKAAVATLNALGVACVAMPCNTAH-H 93
Query: 91 IKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHI 150
D+L + + + + + G +++L+T TL + + + + + +
Sbjct: 94 WYDQLAANSRAEIIHIGDAVVAETRRSLERGRVAVLATQGTLVSGFYQDRMSAAGFELCL 153
Query: 151 HLVSS-MILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVF 209
+ I + + E E + D +L CT ++
Sbjct: 154 PSNTEFQACVDSAISLVKAGSIVDAAV--ETERALDIAQATGADAALLGCTELSVVAASL 211
Query: 210 RQLSPWPVDWLDNSDSIARRARCLL-----PRINTHQTRVFDDH 248
+ + +D++ ++AR L H
Sbjct: 212 NDV--NGLVVIDSNAALARACLTRLGFGTQEARGLPTVSRPPGH 253
>gi|254253826|ref|ZP_04947143.1| Aspartate racemase [Burkholderia dolosa AUO158]
gi|124898471|gb|EAY70314.1| Aspartate racemase [Burkholderia dolosa AUO158]
Length = 233
Score = 60.0 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 57/167 (34%), Gaps = 8/167 (4%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L++ L I CNTA LR+ + A+ AA +++L+T T
Sbjct: 70 LNRSGVDLIAIPCNTAH-HWYAPLRARSAAPILHIVDTAV--AALPAGVRRVAVLATGGT 126
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L + + + + + ++ + ++ D +++ +
Sbjct: 127 LASGLYQSALRARGIEPVMPGATAQRDIAACIAAVKAGRV--DAAGRQLSRALATLVRRD 184
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
DV V+ CT P+ H P+ +D + +AR
Sbjct: 185 VDVAVMGCTEIPIAAHALGDA---PLALVDTTHELARATVAYAAERG 228
>gi|313901900|ref|ZP_07835319.1| aspartate racemase [Thermaerobacter subterraneus DSM 13965]
gi|313467841|gb|EFR63336.1| aspartate racemase [Thermaerobacter subterraneus DSM 13965]
Length = 309
Score = 60.0 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/172 (19%), Positives = 58/172 (33%), Gaps = 12/172 (6%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA------YTQSGLI 123
L L +I CNTA + D L++ P + A G
Sbjct: 133 QGLVSLGASLILIPCNTAH-VYFDRLQAASPVPILHIMREVARALVAGGAPGLPPAGGPA 191
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE-IKKEIEG 182
+L+T T+ + + + +R A GIK E ++ +
Sbjct: 192 GLLATELTVESGLYHRALAEVGLEVVVPAPEYQAEVTRAIFGADGIKAGVYEPARQRLLE 251
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ V++ CT PL++ PV W+D ++ +AR A L
Sbjct: 252 AGTHLVERGARVLIAGCTELPLVLRPGDF----PVPWVDPAEILARAALQRL 299
>gi|239932810|ref|ZP_04689763.1| glutamate racemase [Streptomyces ghanaensis ATCC 14672]
Length = 98
Score = 60.0 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query: 15 SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSDILDK 74
I + DSGIG L ++R L P+ + D G P+G L R ++
Sbjct: 21 KIALMDSGIGLLAATAEVRRLRPDADLVLSLDPDGMPWGPRTPEDLTGR-ALAVAEAAAA 79
Query: 75 YQPVLSVIACNTAFTL 90
++P ++ CNTA
Sbjct: 80 HRPDALIVGCNTATVH 95
>gi|213861499|ref|ZP_03385969.1| glutamate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. M223]
Length = 84
Score = 59.6 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLR 133
+Y L+V+ACNTA T+ LR F +G VPAIK AA T +G++ +L+T T++
Sbjct: 3 RYPLALAVVACNTASTVSLPALREKF-DFPVVGVVPAIKPAARLTANGIVGLLATRGTVK 61
Query: 134 RTYTSNLIHSYVSQCHIHLVSS 155
R+YT LI + ++C I ++ S
Sbjct: 62 RSYTHELIARFANECQIEMLGS 83
>gi|1545809|dbj|BAA12209.1| aspartate racemase [Desulfurococcus sp. SY]
Length = 235
Score = 59.6 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 42/244 (17%), Positives = 76/244 (31%), Gaps = 44/244 (18%)
Query: 13 QNSILIFDSGIGGLIVL---QKMRFLMP----EYH---FIYVADDVGFP-------Y--- 52
+ I I G+G L +++ P + H IY P Y
Sbjct: 3 ERVIGIL-GGMGPLATAELFRRIVEKTPAKRDQEHPRIIIY-----NNPKIPDRTAYILG 56
Query: 53 -GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAI 111
G L L + + ++ CNTA +D ++ + + V
Sbjct: 57 RGEDPRPELINSARKL-----ESWGADFIIMPCNTAHFFAEDIQKAIR--IPLVSMVEET 109
Query: 112 KQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
+ + +L+T T++ + + L +E G+K
Sbjct: 110 AERVKEMGLRKVGLLATDGTIKGLVYHRALLKRGIAIVTPDRTGQELV--MEGIYRGVKA 167
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP--VDWLDNSDSIARR 229
+E+ +K KR D I+ CT + + P V +D D IA +
Sbjct: 168 GNVAYGRELLLRVAKKLEKRVDGIIAGCTEVSVALK------PDDLSVPLIDPMDVIAEK 221
Query: 230 ARCL 233
+ L
Sbjct: 222 SVKL 225
>gi|209520237|ref|ZP_03269006.1| aspartate racemase [Burkholderia sp. H160]
gi|209499312|gb|EDZ99398.1| aspartate racemase [Burkholderia sp. H160]
Length = 512
Score = 59.6 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 53/177 (29%), Gaps = 8/177 (4%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QS 120
++ L+ L I CNTA ++ + + T
Sbjct: 315 LALYAACKNLEDGGADLIAIPCNTAHAFVERI--RPALRVPVVNMPGCTADYLRETFPGL 372
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK--IKEDEIKK 178
+ +L+T TL + + ++ G K E
Sbjct: 373 REVGVLATSGTLASRVYEQALDARGFVQVAPSAAAQARLMNAIYGPHGAKAGHTSGECCD 432
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLI--VHVFRQLSPWPVDWLDNSDSIARRARCL 233
++ + + VIVLACT PL+ V V +D +D +ARR
Sbjct: 433 DLAAAVDDLVAQGVQVIVLACTELPLLLREPVLACPGGRVVRLVDPTDVLARRCVEY 489
>gi|14521575|ref|NP_127051.1| aspartate racemase [Pyrococcus abyssi GE5]
gi|5458794|emb|CAB50281.1| racD-1 aspartate racemase [Pyrococcus abyssi GE5]
Length = 228
Score = 59.2 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/183 (14%), Positives = 59/183 (32%), Gaps = 16/183 (8%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G L K + L++ ++ CNTA I+D ++ + + +
Sbjct: 56 GEDPRPELIK-----TAKKLEECGADFIIMPCNTAHAFIEDIRKAIR--IPIISMIEETA 108
Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172
+ + +L+T T+ Y + L+ V +
Sbjct: 109 KKVKELGFKKVGLLATTGTIASGVYEKEFSKYGIE---VLIPREDEQEEVMKGIYDGVKA 165
Query: 173 E--DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ K+ + + E + + I+ CT +++ + V +D D IA A
Sbjct: 166 GNLELGKELLIKIARKLEERGAECIIAGCTEVSVVLS--EKDL--KVPLIDPMDVIAEAA 221
Query: 231 RCL 233
+
Sbjct: 222 VKV 224
>gi|145631325|ref|ZP_01787097.1| predicted DNA-binding transcriptional regulator [Haemophilus
influenzae R3021]
gi|144983110|gb|EDJ90610.1| predicted DNA-binding transcriptional regulator [Haemophilus
influenzae R3021]
Length = 230
Score = 59.2 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/241 (19%), Positives = 73/241 (30%), Gaps = 36/241 (14%)
Query: 12 LQNSILIFDSGIGGL----IV--LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
++N I I +GG+ QK P + D P + R
Sbjct: 1 MKNIIGI----LGGMGPAATADMFQKFIQFTPAH-----CDQEHIPLVISSIPDIPDRTT 51
Query: 66 FLFS-------------DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
+ L+ +IACNTA DEL+ + L + +
Sbjct: 52 SILHGGESPLLAMEERIYGLENAGAKCILIACNTAH-YWYDELKEKC-HVDMLNIIDSTI 109
Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172
I IL+T ATL + Y C + +I+
Sbjct: 110 NEVLQMGKTKIGILATDATLATKLYQKTLEKYGLICLLPNEEHQKSVMESIYLYKSGEIQ 169
Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWL-DNSDSIARRAR 231
+ E I+ E +VI+L CT PLI + D++ ++ R A
Sbjct: 170 KAEELMLIQR--DELIRHGAEVIILGCTEIPLI---LKNAMREQPTLYEDSTAALVRAAI 224
Query: 232 C 232
Sbjct: 225 R 225
>gi|242398533|ref|YP_002993957.1| Aspartate racemase [Thermococcus sibiricus MM 739]
gi|242264926|gb|ACS89608.1| Aspartate racemase [Thermococcus sibiricus MM 739]
Length = 231
Score = 58.8 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/166 (15%), Positives = 60/166 (36%), Gaps = 10/166 (6%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+K+ ++ CNTA +D ++ ++ + + + +L+T
Sbjct: 71 ARKLEKWGADFIIMPCNTAHFFAEDIQKAI--NIPLINMIEEAAEHIKNLGLKKAGLLAT 128
Query: 129 PATLRRTYTSNLIHSYVSQCHI-HLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T++ + + + + L + E ++ K +K
Sbjct: 129 EGTVKGLVYHRALLKRGIEIAVPNEKDQKALMDAIYEGIKAGNLEWGRQKML---EVAKK 185
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
KR D ++ CT + + + + V ++D D IA +A L
Sbjct: 186 LEKRCDGLIAGCTEVSVAL----RQEDFEVPFIDPMDVIAEKAVKL 227
>gi|302336070|ref|YP_003801277.1| aspartate racemase [Olsenella uli DSM 7084]
gi|301319910|gb|ADK68397.1| aspartate racemase [Olsenella uli DSM 7084]
Length = 247
Score = 58.8 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 39/247 (15%), Positives = 70/247 (28%), Gaps = 38/247 (15%)
Query: 12 LQNSI-LIFDSGIGGLIV---LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFL 67
+ I I G+G L ++ + P D P + D + R ++
Sbjct: 1 MNKPILGII-GGVGPLATAYFMEMLIKKTPATS-----DQDNMPMIVFNDPQIPDRTAYI 54
Query: 68 FSD--------------ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
L IACNTA + + + +
Sbjct: 55 LDHGRPNPQPEMVKVARWLQDAGADYLAIACNTAHYFYAAI--DDAVDIPVVNIMEETSR 112
Query: 114 AAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
A G + +++T T+R + +C + S + G+K
Sbjct: 113 HIAEKVGHGGRVGLMATEGTVRSEVFQGYFKAMGLECVHPDEADQAQVSSLIYD--GVKA 170
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD-----WLDNSDSI 226
D ++ G D +V CT +I ++ L D+ D +
Sbjct: 171 NADYDPGDLLDIAGRLRGAGCDAVVCGCTELSVI---YQDLLDDKTQTVPCWLFDSLDIL 227
Query: 227 ARRARCL 233
A R L
Sbjct: 228 AERCVQL 234
>gi|307130332|ref|YP_003882348.1| putative aspartate racemase [Dickeya dadantii 3937]
gi|306527861|gb|ADM97791.1| Probable aspartate racemase [Dickeya dadantii 3937]
Length = 256
Score = 58.8 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 38/248 (15%), Positives = 78/248 (31%), Gaps = 34/248 (13%)
Query: 22 GIGGL-IV--LQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL--KKRLMFLFS------- 69
G+G L V LQK+ P D P W + ++R +
Sbjct: 15 GMGPLATVDLLQKIIAATPAER-----DQQHVPVAVWNVPQIPDRQRALAGIGASPLPAL 69
Query: 70 ----DILDKYQPVLSVIACNTAFTLIKDELRST---FPSMAFLGAVPAIKQAAAYTQSGL 122
+ L++ +I CNTA DEL++ + + A A T S
Sbjct: 70 LDGVERLNRLDISHLIIPCNTAH-HWFDELQAASRAPVLHIADVTLIQAQAALADTSSPR 128
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIH--LVSSMILASRVEEYACGIKIKEDEIKKEI 180
+ +++T TL + + + + + + G + ++
Sbjct: 129 VGLIATHGTLAAGWYQRRLAALDIETVLPDEQEMDNLFVPGCYAVKRGDVAAGGGLFGQL 188
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFR-QLSPWPVDWLDNSDSIARRARCLLPRINT 239
+ ++LACT + + + +D+++++AR L
Sbjct: 189 AERLA---ARGATHLILACTEVAPGLAAMQSRWLARS---IDSTEALARHCVALWREQAG 242
Query: 240 HQTRVFDD 247
+ D
Sbjct: 243 GNEKPPDG 250
>gi|292494120|ref|YP_003533263.1| aspartate racemase [Haloferax volcanii DS2]
gi|291369140|gb|ADE01370.1| aspartate racemase [Haloferax volcanii DS2]
Length = 245
Score = 58.4 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 47/166 (28%), Gaps = 8/166 (4%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L+ V+A NT + S+ FL V A A + +L T AT
Sbjct: 81 LEAGGADFVVMATNTMHRVAPRI--EAALSIPFLHIVDAAADAILADGLETVGVLGTRAT 138
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + + S R+ + + + +
Sbjct: 139 MDGAFYRERFEEHGIDVIVPEESRRDEIDRIVFEELTKGEIREASRDYYLKAVDQLVERG 198
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237
D IVL CT L+V + V D A + R
Sbjct: 199 ADGIVLGCTEIELLVEQADR---PDVPLFDT---TALHVERAVERS 238
>gi|262280271|ref|ZP_06058055.1| aspartate racemase [Acinetobacter calcoaceticus RUH2202]
gi|262258049|gb|EEY76783.1| aspartate racemase [Acinetobacter calcoaceticus RUH2202]
Length = 236
Score = 58.4 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/236 (16%), Positives = 78/236 (33%), Gaps = 34/236 (14%)
Query: 12 LQNSILIFDSGIGGL----IV--LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
+ +I I +GG+ + + K+ P + D P + R
Sbjct: 1 MNKAIGI----LGGMGPQATIDAMNKIIKNTPAH-----CDQEHIPVITVSIPDIPDRTQ 51
Query: 66 FLFS-------------DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
+ + IL+ Q +I CNTA ++L+ + A+
Sbjct: 52 SIINHDDKPLEKMAEYLKILEAAQVGCIIIPCNTAH-FWFNQLQQRTQTKMISIIESAV- 109
Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172
+Q + IL+T AT+ + + V + I
Sbjct: 110 HFIQDSQIAEVCILATSATISTQLYQSQFIQNNIRFSTPSVEMQHKVMQSIYQYKAGNI- 168
Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
++ K+ + ++ +LACT PLI+ Q +P ++D +D + +
Sbjct: 169 -EKSKQLMSEVIHFYRQNKSIKFLLACTEIPLILQDSIQDNPE--LFVDATDLLIK 221
>gi|260582417|ref|ZP_05850209.1| aspartate racemase [Haemophilus influenzae NT127]
gi|260094568|gb|EEW78464.1| aspartate racemase [Haemophilus influenzae NT127]
Length = 230
Score = 58.4 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 46/239 (19%), Positives = 73/239 (30%), Gaps = 36/239 (15%)
Query: 12 LQNSILIFDSGIGGL----IV--LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
++N I I +GG+ QK P + D P + R
Sbjct: 1 MKNIIGI----LGGMGPAATADMFQKFIQFTPAH-----CDQEHIPLVISSIPDIPDRTT 51
Query: 66 FLFS-------------DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
+ L+ +IACNTA DEL+ + L + +
Sbjct: 52 SILHGGESPLLAMEERIYGLENAGAKCILIACNTAH-YWYDELKEKC-HVDMLNIIDSTI 109
Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172
I IL+T ATL + Y C + +I+
Sbjct: 110 NEVLQMGKTKIGILATDATLATKLYQKTLEKYGLICLLPNEEHQKSVMESIYLYKSGEIQ 169
Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWL-DNSDSIARRA 230
+ E I+ E +VI+L CT PLI + D++ ++ R A
Sbjct: 170 KAEELMLIQR--DELIRHGAEVIILGCTEIPLI---LKNAMREQPTLYEDSTAALVRAA 223
>gi|224159171|ref|XP_002338051.1| predicted protein [Populus trichocarpa]
gi|222870507|gb|EEF07638.1| predicted protein [Populus trichocarpa]
Length = 239
Score = 58.4 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/157 (13%), Positives = 44/157 (28%), Gaps = 7/157 (4%)
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ACNTA +L++ FP + L + +L+T T
Sbjct: 75 GVRSVALACNTAHA-WHGQLQALFPQLHVLHIARQAALHMQAGGAQQAIVLATQGTYDSG 133
Query: 136 YTSNLIHSYVSQC-HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ L + + + + + DV
Sbjct: 134 LYDAALAECGITALQPDAQGRARLMQGIYDGVKQGDMDLAA--RCFGEVLAPLLQRHGDV 191
Query: 195 -IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+++ CT PL + + +D + +A+
Sbjct: 192 PVIMGCTEIPLALP--QSPLARGAKLVDPAWILAQAL 226
>gi|298254740|ref|ZP_06978326.1| glutamate racemase [Streptococcus pneumoniae str. Canada MDR_19A]
Length = 92
Score = 58.4 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 35/97 (36%), Gaps = 5/97 (5%)
Query: 104 FLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE 163
+P A +Q G I ++ TP T++ IH + ++ A VE
Sbjct: 1 MGVILPGASAAIKSSQGGKIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVE 60
Query: 164 EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACT 200
A + + + + + + D ++L CT
Sbjct: 61 SGALSTSVTKKVVYETLRPLVGK-----VDSLILGCT 92
>gi|186470440|ref|YP_001861758.1| aspartate racemase [Burkholderia phymatum STM815]
gi|184196749|gb|ACC74712.1| aspartate racemase [Burkholderia phymatum STM815]
Length = 499
Score = 58.1 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/173 (14%), Positives = 59/173 (34%), Gaps = 8/173 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL- 122
++ L++ + I CNTA ++ + + + + + G
Sbjct: 306 SLYATCKRLEEGDADIIAIPCNTAHAFVERI--QPHLGIPIVNMLTETVRFVRESWPGYR 363
Query: 123 -ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK--IKEDEIKKE 179
I +L+T T+ + S + + G+K +++
Sbjct: 364 DIGVLATSGTISSGVYEKALQSQGLRQVTPGEALQTRVMEAIYGNNGVKAGFTTGRCQED 423
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD--WLDNSDSIARRA 230
I + ++I+L CT PL++ + + +D ++ +ARR
Sbjct: 424 IAAAVEGMIAEGVEIIILGCTELPLLLPLAEFIGKNGKRAWLVDPTNVLARRC 476
>gi|295676130|ref|YP_003604654.1| aspartate racemase [Burkholderia sp. CCGE1002]
gi|295435973|gb|ADG15143.1| aspartate racemase [Burkholderia sp. CCGE1002]
Length = 519
Score = 58.1 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 56/177 (31%), Gaps = 8/177 (4%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QS 120
++ L++ L I CNTA ++ + + + T
Sbjct: 315 LALYAACKTLEEGGADLIAIPCNTAHAFVERL--QPALRVPIVNMLTCTADYLRETFPGL 372
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK--IKEDEIKK 178
+ +L+T TL ++ + ++ G K E
Sbjct: 373 REVGVLATSGTLASRVYEQVLDARGLAQIAPSAAAQARLMNAIYGPRGAKAGHTSGECCD 432
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLI--VHVFRQLSPWPVDWLDNSDSIARRARCL 233
++ + + VIVLACT PL+ V V +D +D +ARR
Sbjct: 433 DLAAAVDDLVAQGVQVIVLACTELPLLLREPVLASPGGRVVRLVDPTDVLARRCVAY 489
>gi|18977352|ref|NP_578709.1| putative aspartate racemase [Pyrococcus furiosus DSM 3638]
gi|18893031|gb|AAL81104.1| putative aspartate racemase [Pyrococcus furiosus DSM 3638]
Length = 228
Score = 58.1 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/247 (16%), Positives = 71/247 (28%), Gaps = 44/247 (17%)
Query: 14 NSILIFDSGIGGL-IV--LQKMRFLMPEYH-------FIYVADDVGFP-------Y---- 52
I I G+G L V +++ P IY P Y
Sbjct: 2 KVIGIL-GGMGPLATVELFKRIVEKTPAKRDQDHPKIIIY-----NNPQIPDRTAYILGR 55
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G L + L+K V+ CNTA I D R + + +
Sbjct: 56 GEDPRPQLI-----WTAKKLEKCGADFIVMPCNTAHAFIDDIRREV--GIPVISMIEETA 108
Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172
+ A +L+T T+ + Y + L + V +
Sbjct: 109 KRIASLGIKKAGLLATTGTIVSGVYHKELEKYGLE---ILTPTEEEQELVMKGIYEGVKA 165
Query: 173 E--DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR-R 229
D + + E + + I+ CT +++ + S V +D + IA
Sbjct: 166 GNLDLGRNLLLQIARILEERGAEAIIAGCTEVSVVI----KESDLRVMLIDPMNVIAEVA 221
Query: 230 ARCLLPR 236
+ L
Sbjct: 222 VKMALEE 228
>gi|89095413|ref|ZP_01168326.1| aspartate racemase [Oceanospirillum sp. MED92]
gi|89080320|gb|EAR59579.1| aspartate racemase [Oceanospirillum sp. MED92]
Length = 258
Score = 58.1 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/215 (15%), Positives = 69/215 (32%), Gaps = 28/215 (13%)
Query: 12 LQNSILIFDSGIGGLIVL---QKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLF 68
+ ++ + G+G L L K+ P D P + R L
Sbjct: 23 MFKTLGVL-GGMGPLATLDFAHKIIQNTPAQR-----DQEHIPMLIRSIPQIPDRTDCLM 76
Query: 69 SD-------------ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA 115
+D L I CNTA + +L++ P + A ++
Sbjct: 77 NDSASPLTAMLQGLEELLSAGVEAIAIPCNTAH-FWQPDLQAKSP-VPVFHIAHACSESL 134
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
Q +++++T TL+ + ++ Q + + ++ +K
Sbjct: 135 QQLQISKVTLMATDGTLKAGFYPEILSRQGIQ---LELPPADIQQKIMRGIYSVKSGNIA 191
Query: 176 I-KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVF 209
+ K + F + + ++L CT PL +
Sbjct: 192 LGGKLLNNAFQSLLNQGFERVILGCTEIPLALDHL 226
>gi|48243626|gb|AAT40775.1| putative aspartate racemase [Haemophilus influenzae]
Length = 230
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 46/241 (19%), Positives = 74/241 (30%), Gaps = 36/241 (14%)
Query: 12 LQNSILIFDSGIGGL----IV--LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLM 65
++N I I +GG+ QK P + D P + R
Sbjct: 1 MKNIIGI----LGGMGPAATADMFQKFIQFTPAH-----CDQEHIPLVISSIPDIPDRTT 51
Query: 66 FLFS-------------DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
+ L+ +IACNTA DEL+ + L + +
Sbjct: 52 SILHGGESPLLAMEERIYGLENAGAKCILIACNTAH-YWYDELKEKC-HVDMLNIIDSTI 109
Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172
I IL+T ATL + Y C + +I+
Sbjct: 110 NEVLQMGKTKIGILATDATLATKLYQKTLEKYGLICLLPNEEHQKSVMESIYLYKSGEIQ 169
Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWL-DNSDSIARRAR 231
+ E I+ E ++VI+L CT PLI + D++ ++ R A
Sbjct: 170 KAEELMLIQR--DELIRHGSEVIILGCTEIPLI---LKNAMREQPILYEDSTAALVRAAI 224
Query: 232 C 232
Sbjct: 225 R 225
>gi|160895521|ref|YP_001561103.1| aspartate racemase [Delftia acidovorans SPH-1]
gi|160361105|gb|ABX32718.1| aspartate racemase [Delftia acidovorans SPH-1]
Length = 253
Score = 57.3 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/158 (13%), Positives = 44/158 (27%), Gaps = 7/158 (4%)
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ACNTA +L++ FP + L + +L+T T
Sbjct: 91 GVRSVALACNTAHA-WHGQLQALFPQLHVLHIARQAALHLQAGGAQQAIVLATQGTYDSG 149
Query: 136 YTSNLIHSYVSQC-HIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ L + + + + + DV
Sbjct: 150 LYDAALAECGITALQPDAQGRARLMQGIYDGVKQGDMDLAA--RCFGEVLAPLLQRHGDV 207
Query: 195 -IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
+++ CT PL + + +D + +A+
Sbjct: 208 PVIMGCTEIPLALP--QSPLARGAGLVDPAWILAQALA 243
>gi|306820339|ref|ZP_07453978.1| Asp/Glu/Hydantoin family racemase [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304551668|gb|EFM39620.1| Asp/Glu/Hydantoin family racemase [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 216
Score = 57.3 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/186 (13%), Positives = 66/186 (35%), Gaps = 10/186 (5%)
Query: 47 DVGFPYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLG 106
Y + L + + CN+ + + E + ++ +
Sbjct: 39 QARLQY--FSKDELYDLFYSTCEKAIKLGAAK-IFLYCNSLSSSVDYEKVAKSLNIEIIT 95
Query: 107 AVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYA 166
+ K +Y ++ ++ + + N+IH Y + + +M + +E+
Sbjct: 96 PLETYKSLPSYCKN---IVILSANGVSAYNIDNIIHKYNKDVNTISIGNMSIVESIEDKK 152
Query: 167 CGIKIKEDEIKKEIEGCFIEKEGKRT--DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSD 224
+I E+ + + D ++L CTH+P + + L+ ++ +D +D
Sbjct: 153 SPRQIMEELNLEGFIKYLENINHPKYKTDTLILGCTHFPYLKKEIKLLT--TLNIIDTND 210
Query: 225 SIARRA 230
+ RR
Sbjct: 211 DMIRRL 216
>gi|241896564|ref|ZP_04783860.1| aspartate racemase [Weissella paramesenteroides ATCC 33313]
gi|241870286|gb|EER74037.1| aspartate racemase [Weissella paramesenteroides ATCC 33313]
Length = 241
Score = 57.3 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 49/165 (29%), Gaps = 8/165 (4%)
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT-QSGLISILSTPATLRR 134
VI CNTA + EL+ F A+K T +S + I++T T+
Sbjct: 83 GVSFIVITCNTAHYFL-PELQKQSEVPIFSMPELAVKACKKETNKSIRVGIMATNGTISA 141
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILAS-RVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ I L + E + E ++ F E D
Sbjct: 142 GIYQKALIGKNVTPVIPDEYQQNLVMSLIYEDIKNRNFVDQEKYYQLIEYF--FEECECD 199
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
I+L CT + +D +A+ + +
Sbjct: 200 YIILGCTELSVAQEQTHY---PSEYVIDAQFELAKYVVNQVKQAG 241
>gi|330827247|ref|YP_004390550.1| aspartate racemase [Alicycliphilus denitrificans K601]
gi|329312619|gb|AEB87034.1| aspartate racemase [Alicycliphilus denitrificans K601]
Length = 246
Score = 57.3 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 49/165 (29%), Gaps = 7/165 (4%)
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L + CNTA L+ P + L A +++L+T
Sbjct: 83 QLAGLGARAVAMPCNTAHA-WHAALQERVPQVELLHMPRETAAALRAQGQERVALLATEG 141
Query: 131 TLRRTYTSNLIHSYVSQCHIH-LVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
+ R + C + + L + + + + + G
Sbjct: 142 SYRIGLYEQAFAAQGIACVLPDAKARQWLMQGIYDGVKAGDMALAQQRFVAVG--QALRA 199
Query: 190 KRTD-VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+ D + +ACT PL + + W +D + +AR
Sbjct: 200 QHGDIALAMACTEIPLALPQAPEAQGW--TLIDPTAILARALARR 242
>gi|259046771|ref|ZP_05737172.1| glutamate racemase [Granulicatella adiacens ATCC 49175]
gi|259036539|gb|EEW37794.1| glutamate racemase [Granulicatella adiacens ATCC 49175]
Length = 223
Score = 56.9 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/182 (13%), Positives = 61/182 (33%), Gaps = 9/182 (4%)
Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
+ +++ + + L + V + + + D L+ + P
Sbjct: 47 EDEEREQYIRNVINGLKNDIDAVFVYCNSLSSVVNFDSLQEEY---RLPMITPMQMYRTL 103
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
+ +++++ + +NL + V+ + L +E +I +
Sbjct: 104 GVEHDYLAVMAANSHGLTGVENNLY-IANPNLKVFGVTMLELVKAIETGKPEEEIIKQFD 162
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPR 236
+ + F E + +VL CTH+P + QL + +D + R + +
Sbjct: 163 FQSLFHYF---ESTEIEAVVLGCTHFPYVKSELEQL--SNIPIIDVGVYMIDRLKSHIQE 217
Query: 237 IN 238
N
Sbjct: 218 EN 219
>gi|120610346|ref|YP_970024.1| aspartate racemase [Acidovorax citrulli AAC00-1]
gi|120588810|gb|ABM32250.1| aspartate racemase [Acidovorax citrulli AAC00-1]
Length = 254
Score = 56.9 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/155 (15%), Positives = 48/155 (30%), Gaps = 9/155 (5%)
Query: 82 IACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
++CNTA L+ P + L ++L+T T
Sbjct: 101 MSCNTAHA-WHAALQERVPGVELLHIARETAAELQRRGIRRAALLATQGTYGMGLYDEAF 159
Query: 142 HSYVSQCHIHLVSSMILASRVEEYACGIKIKED--EIKKEIEGCFIEKEGKRTDV-IVLA 198
++ + ++ S + D ++ + DV +V+A
Sbjct: 160 ATHGVE---CVLPSAKAKELLMAGIYDGVKAGDMALARRRFAEAGQAVRAQHGDVPLVMA 216
Query: 199 CTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
CT PL + + + W +D S+ +A
Sbjct: 217 CTEIPLALPDAPEAAGW--TLVDPSEILAAALVRR 249
>gi|206896546|ref|YP_002247561.1| aspartate racemase [Coprothermobacter proteolyticus DSM 5265]
gi|206739163|gb|ACI18241.1| aspartate racemase [Coprothermobacter proteolyticus DSM 5265]
Length = 239
Score = 56.9 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 64/167 (38%), Gaps = 10/167 (5%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAI--KQAAAYTQSGLISIL 126
+ +L+ +ACNTA D + F+ V ++ + ++Q+ I +
Sbjct: 71 ARLLESAGVNAICMACNTAHIFESDI--KAHIHVDFISIVDSVLNELKGTFSQAKSIGLA 128
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T + + L ++ + ++ + E+ + E
Sbjct: 129 GTMGVFSSHLYDEPL--MQRGYKLILPTNELQEELMKVIYSIKQGCIKEVIDKAEELLQW 186
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+ ++ DV+++ACT PL++ P+ +D+++++A+
Sbjct: 187 YKDQKADVLIMACTELPLVLDYLV----PPIPVVDSTEALAKSVVRY 229
>gi|91787877|ref|YP_548829.1| aspartate racemase [Polaromonas sp. JS666]
gi|91697102|gb|ABE43931.1| Aspartate racemase [Polaromonas sp. JS666]
Length = 251
Score = 56.9 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 58/153 (37%), Gaps = 7/153 (4%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L +ACNTA EL+ FP + L + QA A + +L+T T
Sbjct: 87 LAALGASTVAVACNTAHA-WHAELQERFPQLEVLHVAREVAQALASRGVREVGLLATEGT 145
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
R + QCHI L + ++ G+K+ + ++ + +R
Sbjct: 146 YRAGLYDQALRQAGLQCHIPL--AEERERLMDGIYHGVKVGNMALARDCFASVAQALARR 203
Query: 192 --TDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222
+VL CT PL + ++ +D +D
Sbjct: 204 HGLSTLVLGCTEIPLALGAVPEM--DELDLVDP 234
>gi|269104255|ref|ZP_06156951.1| aspartate racemase [Photobacterium damselae subsp. damselae CIP
102761]
gi|268160895|gb|EEZ39392.1| aspartate racemase [Photobacterium damselae subsp. damselae CIP
102761]
Length = 353
Score = 56.5 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/194 (15%), Positives = 59/194 (30%), Gaps = 15/194 (7%)
Query: 59 ALKKRLMFLFSDILDKY-QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
L+K ++ L +Y + +ACN+A L + L P A+
Sbjct: 62 ELRKYATATYTLRLMQYLDVKVMGLACNSAHELFRTILPQI-PVHFVDMIKQTA--ASLE 118
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV----EEYACGIKIKE 173
I ++ + + + + + + + E KI
Sbjct: 119 GSEDTILVMGVNSLVDSGLYQSALADQGVKSTKPSLENQQKVMDAIYHPEFGIKTAKITP 178
Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACTHYPL-------IVHVFRQLSPWPVDWLDNSDSI 226
+ E E + IVL CT PL + + L P + +D S +
Sbjct: 179 QAEQLLCEVICDELAKQGCTKIVLGCTELPLALTAESCLRFKQQGLLPPEITVIDASMVL 238
Query: 227 ARRARCLLPRINTH 240
A+ L ++
Sbjct: 239 AQSLISTLGDASSL 252
>gi|4001718|dbj|BAA35091.1| aspartate racemase [Thermococcus sp. KS-8]
Length = 232
Score = 56.5 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 56/165 (33%), Gaps = 8/165 (4%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L++ ++ CNTA + + + + + +L+T
Sbjct: 69 ARKLEECGADFIIMPCNTAHFFAGTI--QSSVIYPLVSMIEETAKRIEEMGLRKVGLLAT 126
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T++ + + L + G+K E+ +E+ +K
Sbjct: 127 DGTIKGMVYHRALLKRGIHIAVPNKKDQGLVMKAIY--EGVKAGNLELGRELLLKVAKKL 184
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+R++ I+ CT +++ V +D D IA RA L
Sbjct: 185 ERRSEGIIAGCTEVSVVLKPGDL----TVPLIDPMDVIAERAVKL 225
>gi|317484334|ref|ZP_07943255.1| aspartate racemase [Bilophila wadsworthia 3_1_6]
gi|316924412|gb|EFV45577.1| aspartate racemase [Bilophila wadsworthia 3_1_6]
Length = 250
Score = 56.5 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 46/251 (18%), Positives = 80/251 (31%), Gaps = 37/251 (14%)
Query: 10 KKLQNSILIFDSGIG---GLIVLQKMRFLMPEYHFIYVADDVGFP---Y------GNWED 57
+ I I G+G GL + +K+ AD P Y G
Sbjct: 1 MRQDERIGIV-GGVGPHAGLDLTRKLFDHTRAE-----ADQEHLPVMLYSFPDRIGERPA 54
Query: 58 HALKK------RLMFLFSDILDKYQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLG 106
L K + L + + + CNTA + ++L +T + F+
Sbjct: 55 FLLGKTADNPGEAIGDIMAELARAGATVIGMPCNTAHSPRILDAALEKLNATGRPVRFVH 114
Query: 107 AVPAIKQAAAYTQSGLISI--LSTPATLRRTYTSNLIHSYVSQC-HIHLVSSMILASRVE 163
+ A+ + + LST ATL + + + H + +
Sbjct: 115 MIDAVVRHVRQRCGEGARVGILSTLATLETRLYQDSLERAGLEALHPAPDGCARVQEAIS 174
Query: 164 EYACGIKIKEDEIKKEIEGCFIE--KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221
GIK + ++ E + D I+L CT PL + + V +D
Sbjct: 175 NREYGIKARNPVTERARADLLDEARRLAGNADAIILGCTEIPLALP--EKELG-GVPLID 231
Query: 222 NSDSIARRARC 232
+D +AR
Sbjct: 232 ATDVLARELVR 242
>gi|163856639|ref|YP_001630937.1| putative aspartate racemase [Bordetella petrii DSM 12804]
gi|163260367|emb|CAP42669.1| putative aspartate racemase [Bordetella petrii]
Length = 245
Score = 56.5 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/174 (21%), Positives = 62/174 (35%), Gaps = 6/174 (3%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILS 127
L + I CNTA L D+L + P + L + A+ Q G I ++
Sbjct: 73 RFLHAAGARVIAIPCNTAH-LWYDQLCAATP-LPILHIIDAVAQDLRRLGLAHGRIGLMG 130
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TPATL + + QC + + I V +
Sbjct: 131 TPATLALGLYQTRLERHGYQCIVPD-ADEIERYCVAPIRAVKAGDLPAAVEPAMQGVRLL 189
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D +VL CT PL + ++ + V D+ D++AR A + H+
Sbjct: 190 RARGADAVVLGCTELPLAIPHAQRAA-LGVLLTDSIDALARAAIDYWRQTPEHR 242
>gi|325475083|gb|EGC78269.1| Asp/Glu/Hydantoin family Racemase [Treponema denticola F0402]
Length = 224
Score = 56.1 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 68/171 (39%), Gaps = 8/171 (4%)
Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA 115
AL+ + ++ + K + VI CN+ + I E ++ + K+ A
Sbjct: 36 SQEALENLFIKNSNEAIKK-GADIIVIYCNSLSSAIDYEKIQRLLNIQIFSPLDTYKKLA 94
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
++ I+IL+ L +I Y + + + +M + +E +I +
Sbjct: 95 DDCKN--IAILAANG-LAAYTIDKIIQKYNREKNTIPIGNMSIVQLIENGLPPAEIIKLL 151
Query: 176 IKKEIEGCF--IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSD 224
K IE + D ++L CTH+P I + ++ + + +D ++
Sbjct: 152 NLKGFLSYLENIEISEYKIDSLMLGCTHFPYIKNELQKHT--SIRIVDPAE 200
>gi|89901877|ref|YP_524348.1| aspartate racemase [Rhodoferax ferrireducens T118]
gi|89346614|gb|ABD70817.1| Aspartate racemase [Rhodoferax ferrireducens T118]
Length = 259
Score = 56.1 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 53/160 (33%), Gaps = 7/160 (4%)
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ACNTA DEL++ P + L + + + +L+T T R
Sbjct: 101 GVCAVAMACNTAHA-WHDELQARIPLIELLHMPREVVAYLRALRLREVGLLATQGTYRTG 159
Query: 136 YTSNLIHSYVSQCHI-HLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ CH+ + L + + + G+ DV
Sbjct: 160 LYEAALAQAGITCHLPYEAERETLMRGIYDGVKTG--DMAYAQSCFVDVAQRLIGRHGDV 217
Query: 195 -IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+++ CT PL + Q + W ++ + +A+
Sbjct: 218 PLIMGCTEIPLTLTSAPQAAKW--TLVNPAQVLAQALASR 255
>gi|186474121|ref|YP_001861463.1| aspartate racemase [Burkholderia phymatum STM815]
gi|184196453|gb|ACC74417.1| aspartate racemase [Burkholderia phymatum STM815]
Length = 487
Score = 56.1 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/188 (14%), Positives = 60/188 (31%), Gaps = 8/188 (4%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
++ L+ L I CNTA I + + + T +
Sbjct: 284 LALYATCRKLEDGGANLIAIPCNTAHAFIAPI--EARLRIPIVNMMSVTADFLRATFPSV 341
Query: 123 ISI--LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK--IKEDEIKK 178
+ I L+T T+ + + + + + A G+K E
Sbjct: 342 LRIGLLATDGTIASGVYREALEARGLAEVLPPPAMQARVTNAIYGARGVKAGFTSGECVD 401
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLS--PWPVDWLDNSDSIARRARCLLPR 236
+I ++ ++I+LACT PL+ ++ ++D +D +A+
Sbjct: 402 DIIAAVESLLLQQVEIILLACTELPLLFPQAITVTRHGRTAQFVDPADVLAKSCVEFARG 461
Query: 237 INTHQTRV 244
+ +
Sbjct: 462 KPLAERKT 469
>gi|42527702|ref|NP_972800.1| racemase [Treponema denticola ATCC 35405]
gi|41818530|gb|AAS12719.1| racemase, Asp/Glu/Hydantoin family [Treponema denticola ATCC 35405]
Length = 224
Score = 56.1 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 67/171 (39%), Gaps = 8/171 (4%)
Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA 115
AL+ + ++ + K + VI CN+ + I E ++ + K+
Sbjct: 36 SQEALENLFIKNSNEAIKK-GADIIVIYCNSLSSAIDYEKIQRLLNIQIFSPLDTYKKLT 94
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
++ I+IL+ L +I Y + + + +M + +E +I +
Sbjct: 95 DDCKN--IAILAANG-LAAYTIDKIIQKYNREKNTIPIGNMSIVQLIENGLPPAEIIKLL 151
Query: 176 IKKEIEGCF--IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSD 224
K IE + D ++L CTH+P I + ++ + + +D ++
Sbjct: 152 NLKGFLSYLENIEINDYKIDSLMLGCTHFPYIKNELQKHT--SIRIVDPAE 200
>gi|227551698|ref|ZP_03981747.1| aspartate racemase [Enterococcus faecium TX1330]
gi|257887166|ref|ZP_05666819.1| aspartate racemase [Enterococcus faecium 1,141,733]
gi|257895703|ref|ZP_05675356.1| aspartate racemase [Enterococcus faecium Com12]
gi|293377687|ref|ZP_06623876.1| aspartate racemase [Enterococcus faecium PC4.1]
gi|293571882|ref|ZP_06682898.1| aspartate racemase [Enterococcus faecium E980]
gi|227179139|gb|EEI60111.1| aspartate racemase [Enterococcus faecium TX1330]
gi|257823220|gb|EEV50152.1| aspartate racemase [Enterococcus faecium 1,141,733]
gi|257832268|gb|EEV58689.1| aspartate racemase [Enterococcus faecium Com12]
gi|291608136|gb|EFF37442.1| aspartate racemase [Enterococcus faecium E980]
gi|292643687|gb|EFF61808.1| aspartate racemase [Enterococcus faecium PC4.1]
Length = 243
Score = 56.1 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/164 (16%), Positives = 53/164 (32%), Gaps = 8/164 (4%)
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
P V+ CNTA +EL++ A + +G ++IL T +++
Sbjct: 77 PNFIVLTCNTAH-YFFEELQAATDIPILHMPREAANELVRQHTTGRVAILGTEGSMKAGI 135
Query: 137 TSNLIHSYVSQCHIHLVS-SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ + + I + + + E+ EI +E+ + +
Sbjct: 136 YEREVKNLGFETVIPDTALQEKINYLIYHEIKESDHLNQELYYEILEEAVERLN--CEKV 193
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPRIN 238
+L CT L+ +D +A R L N
Sbjct: 194 ILGCTELSLMHEFAED---NHYPVIDAQSILADRTIERALAERN 234
>gi|257898273|ref|ZP_05677926.1| aspartate racemase [Enterococcus faecium Com15]
gi|257836185|gb|EEV61259.1| aspartate racemase [Enterococcus faecium Com15]
Length = 243
Score = 56.1 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/164 (16%), Positives = 53/164 (32%), Gaps = 8/164 (4%)
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
P V+ CNTA +EL++ A + +G ++IL T +++
Sbjct: 77 PNFIVLTCNTAH-YFFEELQAATDIPILHMPREAANELVRQHTTGRVAILGTEGSMKAGI 135
Query: 137 TSNLIHSYVSQCHIHLVS-SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ + + I + + + E+ EI +E+ + +
Sbjct: 136 YEREVKNLGFETVIPDTALQEKINYLIYHEIKESDHLNQELYYEILEEAVERLN--CEKV 193
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPRIN 238
+L CT L+ +D +A R L N
Sbjct: 194 ILGCTELSLMHEFAED---NHYPVIDAQSILADRTIERALAERN 234
>gi|218507901|ref|ZP_03505779.1| probable aspartate racemase protein [Rhizobium etli Brasil 5]
Length = 261
Score = 55.7 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 21/161 (13%), Positives = 48/161 (29%), Gaps = 2/161 (1%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
R + ++ L +I NT + + + S+ + + ++
Sbjct: 93 ARRLGDVAERLQAAGAGCILICTNTMHLIADEV--AAKVSVPLIHIIDETAKSLHAAGRK 150
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+L+T T+ + + + S + + + D ++++
Sbjct: 151 RPLLLATRYTMEHGFYAERMKSLGLDIMVPEAADRTTVHDIIFNELCAGRVHDRSREKLI 210
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222
D I+L CT LI+ R P D
Sbjct: 211 DIIDRAVENGADSIILGCTEICLILDPDRLPLPGLRHHHDP 251
>gi|114284|sp|P29079|RACD_ENTFC RecName: Full=Aspartate racemase
gi|47644|emb|CAA43598.1| aspartate racemase [Streptococcus thermophilus]
Length = 243
Score = 55.7 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/164 (16%), Positives = 53/164 (32%), Gaps = 8/164 (4%)
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
P V+ CNTA +EL++ A + +G ++IL T +++
Sbjct: 77 PNFIVLTCNTAH-YFFEELQAATDIPILHMPREAANELVRQHTTGRVAILGTEGSMKAGI 135
Query: 137 TSNLIHSYVSQCHIHLVS-SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ + + I + + + E+ EI +E+ + +
Sbjct: 136 YEREVKNLGFETVIPDTALQEKINYLIYHEIKESDHLNQELYYEILEEAVERLN--CEKV 193
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPRIN 238
+L CT L+ +D +A R L N
Sbjct: 194 ILGCTELSLMNEFAED---NHYPVIDAQSILADRTIERALAERN 234
>gi|226357715|ref|YP_002787454.1| aspartate racemase [Deinococcus deserti VCD115]
gi|226319957|gb|ACO47950.1| putative aspartate racemase [Deinococcus deserti VCD115]
Length = 243
Score = 55.7 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 61/172 (35%), Gaps = 9/172 (5%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L V+ CNTA +D L ++ F+ + + AA Q GL
Sbjct: 63 VLAQMARGLQASGADFLVMVCNTAHAFEEDIL--NATTLPFVSLIEETRDAALREQPGLQ 120
Query: 124 SI--LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ L+T L + Y + L S + Y ++ E+
Sbjct: 121 RVGLLATSTCLGAGLYQSAFAPYGV-STLALEGSALARFMDLLYQIKAGDTGPRVRAEMR 179
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+E +V+V CT PL++ PV ++++D + R
Sbjct: 180 TLALELVDSGAEVLVAGCTEVPLVLD----AQDVPVPLVNSTDVLVERTLQY 227
>gi|256545541|ref|ZP_05472901.1| aspartate racemase [Anaerococcus vaginalis ATCC 51170]
gi|256398752|gb|EEU12369.1| aspartate racemase [Anaerococcus vaginalis ATCC 51170]
Length = 238
Score = 55.7 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 30/166 (18%), Positives = 53/166 (31%), Gaps = 9/166 (5%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
+ +DK P VI CNTA D+L+ + + I I +T
Sbjct: 70 ESVDKLNPDFYVITCNTAH-FFYDDLQKLTKKPIINMIELVENKLNKIKKPSTIGIFATE 128
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ +N+I + + + E +K K + E
Sbjct: 129 GTIKSKLFNNIIERCSHKAFVSSRKIQDNIN--ECLYGDVKEKGTINFERYHNTLKEMMD 186
Query: 190 KRTDVIVLACTHYPLI--VHVFRQLSPWPVDWLDNSDSIARRARCL 233
+ D I++ CT I L P +D+ + + L
Sbjct: 187 QGCDYIIIGCTEASYINSKDENSNLYP----LIDSEKELVNESLKL 228
>gi|157146318|ref|YP_001453637.1| hypothetical protein CKO_02076 [Citrobacter koseri ATCC BAA-895]
gi|157083523|gb|ABV13201.1| hypothetical protein CKO_02076 [Citrobacter koseri ATCC BAA-895]
Length = 239
Score = 55.7 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/168 (16%), Positives = 56/168 (33%), Gaps = 12/168 (7%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA-YTQSGLISILST 128
+ L++ VIACNTA E + L V A + + +++T
Sbjct: 71 EQLNRAGASHIVIACNTAH--HWYEALAQHSDAPLLHIVDATLAVFEGKEKPRRVGLIAT 128
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMI--LASRVEEYACGIKIKEDEIKKEIEGCFIE 186
TL + + S + + G E+
Sbjct: 129 QGTLDAGWFQHGFASMGIESVQPTPEELRQWFVPGCYAVKRGELRTGGELLSLQAQAL-- 186
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW-LDNSDSIARRARCL 233
+ + +VLACT P+ +++ + +D ++++A++ L
Sbjct: 187 -RDRGAERLVLACTEVPVA---LAEVTSPHLAVSIDPAEALAQQCARL 230
>gi|186470782|ref|YP_001862100.1| aspartate racemase [Burkholderia phymatum STM815]
gi|184197091|gb|ACC75054.1| aspartate racemase [Burkholderia phymatum STM815]
Length = 233
Score = 55.7 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/174 (14%), Positives = 61/174 (35%), Gaps = 8/174 (4%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
D+L++ L I CN+A ++ + + + I AA + +++L+T
Sbjct: 68 DMLNRNSVGLIAIPCNSAH-HWYAQICAHSAAPVLN--IAEICVAAVPPTAKRVAVLATG 124
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
L + + + + L + + D +E
Sbjct: 125 GALVSGFYQRALAERDIEPVTPDETVQPLVAVCIDAVKSG--DLDAAAMHLETALAMLVK 182
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
+ + +LACT PL ++++ + +D+S +AR ++ +
Sbjct: 183 QGVTMALLACTEIPLAA---QRIAAPALPLIDSSLELARATVKYACERGWNRPQ 233
>gi|239814554|ref|YP_002943464.1| aspartate racemase [Variovorax paradoxus S110]
gi|239801131|gb|ACS18198.1| aspartate racemase [Variovorax paradoxus S110]
Length = 245
Score = 55.4 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 54/154 (35%), Gaps = 5/154 (3%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L IACNTA L+ FP + L + + A +G +++++T T
Sbjct: 83 LAALGSQAVAIACNTAHA-WHARLQERFPQVELLHMAREVARHLAAQGTGSVALMATEGT 141
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASR-VEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
R + CH+ L + +R + + ++ E E
Sbjct: 142 YRVRLYEQALAEAGLDCHVPLAEERRIITRGIFDGVKAGNMQLAEACFSQVA-LRLAERH 200
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSD 224
I++ CT PL + ++ + +D +
Sbjct: 201 GPVTIIMGCTEVPLGLQGSAAVAG--LSLVDPAQ 232
>gi|225574214|ref|ZP_03782824.1| hypothetical protein RUMHYD_02278 [Blautia hydrogenotrophica DSM
10507]
gi|225038582|gb|EEG48828.1| hypothetical protein RUMHYD_02278 [Blautia hydrogenotrophica DSM
10507]
Length = 237
Score = 55.4 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 47/163 (28%), Gaps = 9/163 (5%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L + V++CNTA + + L + + + +L+T T
Sbjct: 75 LQGMGADVLVMSCNTAHYFYDSIVPYF--DIPLLHMIRETAKHLKAQEIQKAGLLATSGT 132
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILAS-RVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
L + + + + + D + E + +
Sbjct: 133 LNCGVYREAMKREGIELLTPDGEDQEAVMGMIYQGVKAGRTDLDTRR--FERAMEKLLER 190
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+V++L CT P+ V + W D + +A
Sbjct: 191 GAEVLILGCTELPVAVSRY----GWDYPVADPTQILAESVVHY 229
>gi|73541409|ref|YP_295929.1| aspartate racemase [Ralstonia eutropha JMP134]
gi|72118822|gb|AAZ61085.1| aspartate racemase [Ralstonia eutropha JMP134]
Length = 233
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/159 (15%), Positives = 55/159 (34%), Gaps = 8/159 (5%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L++ Q L VI CN+ +LR + + + AA + +++L+T
Sbjct: 70 LNRNQVGLVVIPCNS-SHHWYRQLRERSSAPILH--IASTCVAALPHGTRRVAVLATRGA 126
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L + + Q + + + + + ++ +
Sbjct: 127 LASRIYQDALAERDIQPVVPDEAEQVQVDTCIRSV--KAGAFEAAGEALQAVLASLAARN 184
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
V ++ CT P+ + R P+ +D++ +AR
Sbjct: 185 IGVAIMGCTEIPVALRQLRSA---PLTMIDSTLELARAT 220
>gi|239616913|ref|YP_002940235.1| aspartate racemase [Kosmotoga olearia TBF 19.5.1]
gi|239505744|gb|ACR79231.1| aspartate racemase [Kosmotoga olearia TBF 19.5.1]
Length = 230
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/180 (14%), Positives = 54/180 (30%), Gaps = 14/180 (7%)
Query: 62 KRLMFLF---SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT 118
+R+ L + + K ++ NT +L + +L + A
Sbjct: 59 QRVADLMVASAHKVAKTGADFAICPDNTIHHAF--DLVVEKSPIPWLHIAEEVAAEAKRK 116
Query: 119 QSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKK 178
+ IL T + + + I + + + E +
Sbjct: 117 NYKCLGILGTRFLMESPVYPAKLDAAGIGYRIPETKNRERINEIIFNELVYGRFYPESRA 176
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDW--LDNSDSIAR-RARCLLP 235
+ + + D +VL CT PL+ + P LD++ +AR + L
Sbjct: 177 YFNEVIGKLKDQGCDAVVLGCTEIPLL------VIPEESPLPTLDSTRILARAALKKALE 230
>gi|326316506|ref|YP_004234178.1| aspartate racemase [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323373342|gb|ADX45611.1| aspartate racemase [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 254
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/154 (14%), Positives = 47/154 (30%), Gaps = 7/154 (4%)
Query: 82 IACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLI 141
++CNTA L+ P + L ++L+T T
Sbjct: 101 MSCNTAHA-WHAALQERVPGVELLHIARETAAELQRRGIRRAALLATQGTYGMGLYDEAF 159
Query: 142 HSYVSQCHIHLVSSMIL-ASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV-IVLAC 199
++ +C + + + + ++ + DV +V+AC
Sbjct: 160 DTHGVECVLPSAEAKEWLMEGIYDGVKAG--DMALARRRFAEVGQAVRAQHGDVPLVMAC 217
Query: 200 THYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
T PL + + + W +D S +A
Sbjct: 218 TEIPLALPDAPEAAGW--TLVDPSGILAAALVRR 249
>gi|212223817|ref|YP_002307053.1| aspartate racemase [Thermococcus onnurineus NA1]
gi|212008774|gb|ACJ16156.1| aspartate racemase [Thermococcus onnurineus NA1]
Length = 229
Score = 54.6 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 39/246 (15%), Positives = 71/246 (28%), Gaps = 48/246 (19%)
Query: 13 QNSILIFDSGIGGLIVL---QKMRFLMPEYH-------FIYVADDVGFPYGNWEDHALKK 62
+ I I G+G L +++ P IY P +
Sbjct: 3 ERVIGIL-GGMGPLATAELFRRIIEKTPAKRDQDHPRIIIY-----NNP-------KIPD 49
Query: 63 RLMFLF-------------SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP 109
R F+ + L+ + ++ CNTA + R S+ + V
Sbjct: 50 RTAFILGEGEDPRPELVESARKLESWGADFIIMPCNTAHFFAESIQRKI--SIPLVSMVE 107
Query: 110 AIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILAS--RVEEYAC 167
+ + +L+T T++ + Q + + L E
Sbjct: 108 ETAKRIEEMGLKKVGLLATDGTIKGLVYHRALLDRGIQIAVPIKKDQELVMKGIYEGVKA 167
Query: 168 GIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
G E+ + KR++ I+ CT + + V +D D IA
Sbjct: 168 GNLELGRELLLRVARRL----EKRSEGIIAGCTEVSVALKP----EDLSVPLIDPLDVIA 219
Query: 228 RRARCL 233
A L
Sbjct: 220 EMAVRL 225
>gi|282883367|ref|ZP_06291960.1| racemase [Peptoniphilus lacrimalis 315-B]
gi|281296778|gb|EFA89281.1| racemase [Peptoniphilus lacrimalis 315-B]
Length = 217
Score = 54.6 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/200 (14%), Positives = 65/200 (32%), Gaps = 21/200 (10%)
Query: 42 IYVADDVGFPYGNWEDHALKKRLMFLFSDILDK-------YQPVLSVIACNTAFTLIKDE 94
++AD E L+ + + I CN+ + +
Sbjct: 30 FFLADS------PKEQSRLQYYSKEILEKKFKNLSRQALSWGAEKFFIYCNSLSAAL--D 81
Query: 95 LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVS 154
++ + P + I IL+ A Y + I S +I +
Sbjct: 82 VKRLSKELDIQIICPFDVYENLDEKYKNIFILAANAL--AAYKEDEILSKTFHRNIISMG 139
Query: 155 SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT--DVIVLACTHYPLIVHVFRQL 212
++ + +E +I E K + + ++ I+L CTH+P + ++
Sbjct: 140 NLSIVENIEVDRPAEEIIEKLNLKGLMNYINNIKDEKYKIQAIILGCTHFPYLKDELKKY 199
Query: 213 SPWPVDWLDNSDSIARRARC 232
+ +D +D + + + +
Sbjct: 200 T--SIDIIDPATEMIKLLKN 217
>gi|293557294|ref|ZP_06675840.1| aspartate racemase [Enterococcus faecium E1039]
gi|293568099|ref|ZP_06679436.1| aspartate racemase [Enterococcus faecium E1071]
gi|294616494|ref|ZP_06696275.1| aspartate racemase [Enterococcus faecium E1636]
gi|294617425|ref|ZP_06697059.1| aspartate racemase [Enterococcus faecium E1679]
gi|291589181|gb|EFF20992.1| aspartate racemase [Enterococcus faecium E1071]
gi|291590642|gb|EFF22370.1| aspartate racemase [Enterococcus faecium E1636]
gi|291596331|gb|EFF27590.1| aspartate racemase [Enterococcus faecium E1679]
gi|291600546|gb|EFF30852.1| aspartate racemase [Enterococcus faecium E1039]
Length = 243
Score = 54.6 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 53/164 (32%), Gaps = 8/164 (4%)
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
QP V+ CNTA +EL++ A + +G ++IL T +++
Sbjct: 76 QPNFIVLTCNTAH-YFFEELQAATDIPILHMPREAANELVRQHTTGRVAILGTEGSMKAG 134
Query: 136 YTSNLIHSYVSQCHIH-LVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDV 194
+ + + I V + + E+ EI +E+ +
Sbjct: 135 IYEREVKNLGFETVIPDTVLQEKINYLIYHEIKESDYLNQELYYEILEEAVERLN--CEK 192
Query: 195 IVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPRI 237
++L CT L+ +D +A R L
Sbjct: 193 VILGCTELSLMHEFAED---NHYPVIDAQSILADRTIERALAER 233
>gi|197106374|ref|YP_002131751.1| aspartate racemase [Phenylobacterium zucineum HLK1]
gi|196479794|gb|ACG79322.1| aspartate racemase [Phenylobacterium zucineum HLK1]
Length = 237
Score = 54.6 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/170 (17%), Positives = 60/170 (35%), Gaps = 9/170 (5%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + + CNTA +L + + + +AAA + +
Sbjct: 65 VLAEMAGALRGAGADVLAMPCNTAHAHS--DLIQRASGLPLIDMIDLAAEAAAESGAVRA 122
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L T L+ + L A Y E+ ++++
Sbjct: 123 GVLGTKGALKLYREYLAARGLGM---VSLPPERQEAFMETLYRIKGGDLSPEVSRQMKAF 179
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
E +V+V CT PL++ + + V+ +D +D +ARR +
Sbjct: 180 ADELVKGGAEVLVAGCTELPLVLDP-QDV---KVELVDPADLLARRCVAV 225
>gi|257878492|ref|ZP_05658145.1| aspartate racemase [Enterococcus faecium 1,230,933]
gi|257882913|ref|ZP_05662566.1| aspartate racemase [Enterococcus faecium 1,231,502]
gi|257884377|ref|ZP_05664030.1| aspartate racemase [Enterococcus faecium 1,231,501]
gi|257889308|ref|ZP_05668961.1| aspartate racemase [Enterococcus faecium 1,231,410]
gi|257894321|ref|ZP_05673974.1| aspartate racemase [Enterococcus faecium 1,231,408]
gi|258615982|ref|ZP_05713752.1| aspartate racemase [Enterococcus faecium DO]
gi|260560081|ref|ZP_05832259.1| aspartate racemase [Enterococcus faecium C68]
gi|261207431|ref|ZP_05922117.1| aspartate racemase [Enterococcus faecium TC 6]
gi|289566469|ref|ZP_06446894.1| aspartate racemase [Enterococcus faecium D344SRF]
gi|293560166|ref|ZP_06676668.1| aspartate racemase [Enterococcus faecium E1162]
gi|294621572|ref|ZP_06700738.1| aspartate racemase [Enterococcus faecium U0317]
gi|314939955|ref|ZP_07847155.1| aspartate racemase [Enterococcus faecium TX0133a04]
gi|314942564|ref|ZP_07849398.1| aspartate racemase [Enterococcus faecium TX0133C]
gi|314947462|ref|ZP_07850877.1| aspartate racemase [Enterococcus faecium TX0082]
gi|314952486|ref|ZP_07855487.1| aspartate racemase [Enterococcus faecium TX0133A]
gi|314992417|ref|ZP_07857843.1| aspartate racemase [Enterococcus faecium TX0133B]
gi|314996257|ref|ZP_07861316.1| aspartate racemase [Enterococcus faecium TX0133a01]
gi|257812720|gb|EEV41478.1| aspartate racemase [Enterococcus faecium 1,230,933]
gi|257818571|gb|EEV45899.1| aspartate racemase [Enterococcus faecium 1,231,502]
gi|257820215|gb|EEV47363.1| aspartate racemase [Enterococcus faecium 1,231,501]
gi|257825668|gb|EEV52294.1| aspartate racemase [Enterococcus faecium 1,231,410]
gi|257830700|gb|EEV57307.1| aspartate racemase [Enterococcus faecium 1,231,408]
gi|260073916|gb|EEW62240.1| aspartate racemase [Enterococcus faecium C68]
gi|260078322|gb|EEW66027.1| aspartate racemase [Enterococcus faecium TC 6]
gi|289161734|gb|EFD09609.1| aspartate racemase [Enterococcus faecium D344SRF]
gi|291598877|gb|EFF29928.1| aspartate racemase [Enterococcus faecium U0317]
gi|291605838|gb|EFF35270.1| aspartate racemase [Enterococcus faecium E1162]
gi|313589579|gb|EFR68424.1| aspartate racemase [Enterococcus faecium TX0133a01]
gi|313593052|gb|EFR71897.1| aspartate racemase [Enterococcus faecium TX0133B]
gi|313595392|gb|EFR74237.1| aspartate racemase [Enterococcus faecium TX0133A]
gi|313598668|gb|EFR77513.1| aspartate racemase [Enterococcus faecium TX0133C]
gi|313640789|gb|EFS05369.1| aspartate racemase [Enterococcus faecium TX0133a04]
gi|313646012|gb|EFS10592.1| aspartate racemase [Enterococcus faecium TX0082]
Length = 243
Score = 54.6 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/163 (15%), Positives = 52/163 (31%), Gaps = 8/163 (4%)
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
P V+ CNTA +EL++ A + +G ++IL T +++
Sbjct: 77 PNFIVLTCNTAH-YFFEELQAATDIPILHMPREAANELVRQHTTGRVAILGTEGSMKAGI 135
Query: 137 TSNLIHSYVSQCHIHLVS-SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ + + I + + + E+ EI +E+ + +
Sbjct: 136 YEREVKNLGFETVIPDTALQEKINYLIYHEIKESDYLNQELYYEILEEAVERLN--CEKV 193
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPRI 237
+L CT L+ +D +A R L
Sbjct: 194 ILGCTELSLMHEFAED---NHYPVIDAQSILADRTIERALAER 233
>gi|295701003|ref|YP_003608896.1| aspartate racemase [Burkholderia sp. CCGE1002]
gi|295440216|gb|ADG19385.1| aspartate racemase [Burkholderia sp. CCGE1002]
Length = 233
Score = 54.6 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/243 (15%), Positives = 78/243 (32%), Gaps = 30/243 (12%)
Query: 16 ILIFDSGIGGL-IV--LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFS--- 69
I I G+G L V + K+ L + +D P ++ R +
Sbjct: 4 IGIL-GGMGPLATVDFMDKIVRLT-HAN----SDQEHLPLLVANLPHIEDRSSAIIDGGA 57
Query: 70 ----------DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119
D+L++ L I CN+A + +R+ + A + +
Sbjct: 58 DPLPALLDGIDLLNRNGVGLIAIPCNSAH-HWYEPMRARSKAPVLHIAQTCVAAVPRAAR 116
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+++L+T L + + + + S + + K+ D
Sbjct: 117 --RVALLATGGALVSGFYQQALADLDIEPVLPDESMQLRVAACIREVKAGKL--DAAGAH 172
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINT 239
+E I + ++ACT PL + P+ +D+S +AR
Sbjct: 173 LEDVLIALASQGVGTALMACTEIPLAARHI---ASPPLILVDSSLELARATVKYACERGW 229
Query: 240 HQT 242
++
Sbjct: 230 NRP 232
>gi|14590552|ref|NP_142620.1| aspartate racemase [Pyrococcus horikoshii OT3]
gi|21465704|pdb|1JFL|A Chain A, Crystal Structure Determination Of Aspartate Racemase From
An Archaea
gi|21465705|pdb|1JFL|B Chain B, Crystal Structure Determination Of Aspartate Racemase From
An Archaea
gi|3257078|dbj|BAA29761.1| 228aa long hypothetical aspartate racemase [Pyrococcus horikoshii
OT3]
Length = 228
Score = 54.6 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/170 (13%), Positives = 55/170 (32%), Gaps = 9/170 (5%)
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
+ + L++ ++ CNTA + +++R + + + +
Sbjct: 63 LIWTAKRLEECGADFIIMPCNTAHAFV-EDIRKAIK-IPIISMIEETAKKVKELGFKKAG 120
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASR-VEEYACGIKIKEDEIKKEIEGC 183
+L+T T+ Y + R + E +K ++ +
Sbjct: 121 LLATTGTIVSGVYEKEFSKYGVEIMTPTEDEQKDVMRGIYEGVKAGNLKLG--RELLLKT 178
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
E + + I+ CT +++ + V +D D IA A +
Sbjct: 179 AKILEERGAECIIAGCTEVSVVLK--QDDL--KVPLIDPMDVIAEVAVKV 224
>gi|187919407|ref|YP_001888438.1| aspartate racemase [Burkholderia phytofirmans PsJN]
gi|187717845|gb|ACD19068.1| aspartate racemase [Burkholderia phytofirmans PsJN]
Length = 233
Score = 54.2 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/159 (15%), Positives = 52/159 (32%), Gaps = 8/159 (5%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L++ L I CN+A + + L A A + + +++L T T
Sbjct: 70 LNRNGVGLIAIPCNSAH--HWYAQIAARSAAPVLHIAEACVAAVPAS-ARRVAVLGTGGT 126
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
L+ + + + + + + + S ++ + +
Sbjct: 127 LKSGFYQAALSARDIEPLVP--GADLQQSIATCIREVKAGALEQAAGHLSTVLGALAAQD 184
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
V+ACT P+ P+ +D+S +AR
Sbjct: 185 VRAAVMACTEIPVAARHLSN---PPLTLIDSSLELARAT 220
>gi|319765055|ref|YP_004128992.1| aspartate racemase [Alicycliphilus denitrificans BC]
gi|317119616|gb|ADV02105.1| aspartate racemase [Alicycliphilus denitrificans BC]
Length = 246
Score = 54.2 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/164 (14%), Positives = 48/164 (29%), Gaps = 5/164 (3%)
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L + CNTA L+ P + L A +++L+T
Sbjct: 83 QLAGLGARAVAMPCNTAHA-WHAALQERVPQVELLHMPRETAAALRAQGQERVALLATEG 141
Query: 131 TLRRTYTSNLIHSYVSQCHIH-LVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
+ R + C + + L + + + + + G + +
Sbjct: 142 SYRIGLYEQAFAAQGIACVLPDAKARQWLMQGIYDGVKAGDMALAQQRFVAVGQALRAQH 201
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+ +ACT PL + + +D + +AR
Sbjct: 202 GGI-ALAMACTEIPLALPQAPEA--QDWALIDPTAILARALARR 242
>gi|330948253|gb|EGH48513.1| glutamate racemase [Pseudomonas syringae pv. pisi str. 1704B]
Length = 36
Score = 54.2 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 12/24 (50%), Positives = 17/24 (70%)
Query: 13 QNSILIFDSGIGGLIVLQKMRFLM 36
+ IFDSG+GGL VL ++R L+
Sbjct: 11 DAPVGIFDSGVGGLSVLNEIRQLL 34
>gi|271965998|ref|YP_003340194.1| aspartate racemase [Streptosporangium roseum DSM 43021]
gi|270509173|gb|ACZ87451.1| aspartate racemase [Streptosporangium roseum DSM 43021]
Length = 301
Score = 54.2 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/213 (16%), Positives = 64/213 (30%), Gaps = 27/213 (12%)
Query: 46 DDVGFPYGNWEDHALKKRLMFLFS-------------DILDKYQPVLSVIACNTAFTLIK 92
D P W D + R + L + L + L + CNTA +
Sbjct: 43 DQGHVPVVIWGDPRVPDRSLSLLGGGEDPTPYLRRGVEALKQAGCELLAVPCNTAHAFVP 102
Query: 93 DELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHL 152
+ + + + A A +L+T TL ++ +
Sbjct: 103 RL--ADEAGLELVSIIEVTADALAADGVRAAGVLATSGTLHAGLYADALRRRGVAVIEPD 160
Query: 153 VSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQL 212
+ + + ++ + + + +V ACT L + R
Sbjct: 161 EPGQRQVTAAIGAVKSGGV-QPAHRRALAELSRSLADRGAERVVTACTELVLALDRSR-- 217
Query: 213 SPWPVDWLDNSDSIARRA-------RCLLPRIN 238
PV LD + +ARR + LLPR +
Sbjct: 218 --VPVPVLDPARLLARRVVGLALGAQRLLPRRH 248
>gi|20808149|ref|NP_623320.1| aspartate racemase [Thermoanaerobacter tengcongensis MB4]
gi|254479423|ref|ZP_05092754.1| aspartate racemase subfamily protein [Carboxydibrachium pacificum
DSM 12653]
gi|20516738|gb|AAM24924.1| Aspartate racemase [Thermoanaerobacter tengcongensis MB4]
gi|214034647|gb|EEB75390.1| aspartate racemase subfamily protein [Carboxydibrachium pacificum
DSM 12653]
Length = 234
Score = 53.8 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 9/171 (5%)
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
+ + L K VI CNTA + R + + + +
Sbjct: 67 LIATAKNLVKAGADFIVIPCNTAHYFLDYLKREV--DIPIINMIEETARYVRNNYPYAEC 124
Query: 125 I--LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ L+T T++ + + A EE + ++ ++ ++
Sbjct: 125 VGLLATSGTIKSNLYHKAFKKFGISVLAGDEKKTMEAIYGEEGIKAGNL-GEKPRRLLKE 183
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
E + VI+ CT L++ P +D +A+ A L
Sbjct: 184 AAQELIRRGAQVIIAGCTEISLVLGEEDVSLP----LVDPLTILAKVAVEL 230
>gi|49478746|ref|YP_038797.1| aspartate racemase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|49330302|gb|AAT60948.1| aspartate racemase [Bacillus thuringiensis serovar konkukian str.
97-27]
Length = 224
Score = 53.8 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 59/165 (35%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L +EL+ + +K T+ +++L+T
Sbjct: 67 AQKLESTGASFIAMPCNTAH-LYFEELQQSLSIPILNIVDETLKAIPENTK--RVALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + + + G E +E+ + +
Sbjct: 124 EATVQSGIYQDGIAKRNIEYIHYEQWQESINQIITYIKSGEV----EEARELWSALVLQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT ++ D++D+S +A+ +
Sbjct: 180 KDEVDTAIIACTDLNVLASE---------DFIDSSQCLAKAVVRM 215
>gi|28210162|ref|NP_781106.1| putative glutamate racemase [Clostridium tetani E88]
gi|28202598|gb|AAO35043.1| putative glutamate racemase [Clostridium tetani E88]
Length = 212
Score = 53.8 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/174 (12%), Positives = 59/174 (33%), Gaps = 9/174 (5%)
Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
L++ ++ +I + + + + + + D+L+ + P
Sbjct: 47 PDRLREMVIEKIKEIKREKIKNIYIHCNSLSGAVDMDKLKEEYE---INIITPLQIYREM 103
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
Q I +L+ I + ++ + + L + +E+ I ED
Sbjct: 104 ANQFDTIGVLAAN-NQSTFGIERTIQEVNPKAYVIGIGILPLVNAIEKSLPVKDIVEDFA 162
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+E + I+L CTH+P + + + + +D + + ++
Sbjct: 163 ---LEKTIEFFIKNNCEAIILGCTHFPYLYKELQ--AKSFIKIIDPAMEMIKKL 211
>gi|268317965|ref|YP_003291684.1| aspartate racemase [Rhodothermus marinus DSM 4252]
gi|262335499|gb|ACY49296.1| aspartate racemase [Rhodothermus marinus DSM 4252]
Length = 254
Score = 53.8 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/251 (15%), Positives = 71/251 (28%), Gaps = 40/251 (15%)
Query: 13 QNSILIFDSGIG---GLIVLQKMRFLMPEYHFIYVADDVGFP-----YGNWEDH------ 58
I + G+G GL +++ + D P G+
Sbjct: 3 DKVIGVI-GGMGPYAGLELVRHIFDQTLAAS-----DQEHLPVVLFSMGDRVPDRSAFLF 56
Query: 59 ----ALKKRLMFLFSDILDKYQPVLSVIACNTAFT-----LIKDELRSTFPSMAFLGAVP 109
+ + + V+ I CNTA ++ +EL T + L +
Sbjct: 57 GKTSENPAYAIAEQIRMAESVGAVVVGIPCNTAHAPSIFNVMLEELARTGSRVRVLHLIE 116
Query: 110 AIKQAAAYTQSG--LISILSTPATLRRTYTSNLIHSYVSQCHI-HLVSSMILASRVEE-- 164
+ + +LST AT R + + + I + +R
Sbjct: 117 ETVRFLREHYPDVKRVGVLSTLATYRLGLYRKALEAAGYEAVIADESVQETIVNRAIFDP 176
Query: 165 ---YACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221
++ + K + +VL CT PL V + +D
Sbjct: 177 SYGIKAQSHPVSKIARQSVLTGIEHLRQKGVEAVVLGCTELPLAVPEPEV---DGIPIID 233
Query: 222 NSDSIARRARC 232
S ++AR
Sbjct: 234 PSLALARALIR 244
>gi|295676959|ref|YP_003605483.1| aspartate racemase [Burkholderia sp. CCGE1002]
gi|295436802|gb|ADG15972.1| aspartate racemase [Burkholderia sp. CCGE1002]
Length = 231
Score = 53.4 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/148 (14%), Positives = 50/148 (33%), Gaps = 3/148 (2%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L++ L ++A NT + + ++ ++ FL A + +L
Sbjct: 67 AARQLERGGADLVILATNTMHRVYESIEQAI--TVPFLHIADPTGAALRAAGVERVGLLG 124
Query: 128 TPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T+ +T+ + L Y + R+ +D +K +
Sbjct: 125 TRYTMEQTFYTGRLRERYGLDTLVPDDDERTDVHRIIYDELCHGNVDDASRKVYQRVIEH 184
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSP 214
+ ++L CT L++ + P
Sbjct: 185 LAARGAQAVILGCTEITLLIKPEDSVLP 212
>gi|313887691|ref|ZP_07821373.1| XkdX family protein [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312846300|gb|EFR33679.1| XkdX family protein [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 212
Score = 53.4 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/175 (16%), Positives = 73/175 (41%), Gaps = 8/175 (4%)
Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA 115
L + + D K + + + + ++ D+L S ++ + + K+
Sbjct: 46 SREDLTRLVEEKIVDAKAKGAEKIFIYCNSLSASIDIDDL-SRRQAIQIITPLDFYKE-- 102
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
++ + IL+ A + Y + + + + + L +E+ +I +
Sbjct: 103 LDSKYKKLIILA--ANSKSAYGVDALVCEKNFRDTISLGILSLVEEIEKKTQPEEIVKKL 160
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+++ F + E D I+LACTH+P + F++L+ ++ LD ++ + +R
Sbjct: 161 DLRDLFNFFNKMED-VPDGIILACTHFPYMKEEFKKLT--DIEILDPAEDMIKRL 212
>gi|209520721|ref|ZP_03269470.1| aspartate racemase [Burkholderia sp. H160]
gi|209498846|gb|EDZ98952.1| aspartate racemase [Burkholderia sp. H160]
Length = 232
Score = 53.4 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/148 (14%), Positives = 50/148 (33%), Gaps = 3/148 (2%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L++ L ++A NT + + ++ ++ FL A + +L
Sbjct: 67 AARQLERGGADLVILATNTMHRVCESIEQAI--TVPFLHIADPTGAALRAAGVERVGLLG 124
Query: 128 TPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T+ +T+ + L Y + R+ +D +K +
Sbjct: 125 TRYTMEQTFYTGRLRERYGLDTLVPDDDERADVHRIIYDELCHGNVDDASRKVYQRVIEH 184
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSP 214
+ ++L CT L++ + P
Sbjct: 185 LAARGAQAVILGCTEITLLIKPEDSVLP 212
>gi|212697323|ref|ZP_03305451.1| hypothetical protein ANHYDRO_01892 [Anaerococcus hydrogenalis DSM
7454]
gi|212675772|gb|EEB35379.1| hypothetical protein ANHYDRO_01892 [Anaerococcus hydrogenalis DSM
7454]
Length = 238
Score = 53.4 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/179 (13%), Positives = 51/179 (28%), Gaps = 6/179 (3%)
Query: 55 WEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA 114
+ L +DK P VI CNTA D+L+ +
Sbjct: 56 KSEENPYDFLKEDVE-SVDKLNPDFYVITCNTAH-FFYDDLQKLTKKPIINMIELVENKL 113
Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174
+ I + +T T++ +++I + + + +K
Sbjct: 114 NELKKPSTIGLFATEGTIKSRLFTDIIERCGHKALVSSKELQENINA--CLYKDVKESGQ 171
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
K + + D I++ CT I + +D+ + + L
Sbjct: 172 INFKRYHKILDKMLEEGADYIIIGCTEASYINSEDEK--RDSYPIIDSEKELVNESLKL 228
>gi|170694718|ref|ZP_02885869.1| aspartate racemase [Burkholderia graminis C4D1M]
gi|170140349|gb|EDT08526.1| aspartate racemase [Burkholderia graminis C4D1M]
Length = 232
Score = 53.4 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/148 (14%), Positives = 50/148 (33%), Gaps = 3/148 (2%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L++ L ++A NT + + R+ + FL A + +L
Sbjct: 67 AARQLERGGAGLVMLATNTMHRVYESIERAIH--VPFLHIADPTGNALRAAGVERVGLLG 124
Query: 128 TPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T+ + + + L Y + + + R+ + E + +G
Sbjct: 125 TRYTMEQAFYTGRLRERYGLETLVPEEAQRADVHRIIYDELCHGNVKSESRAIYQGVIES 184
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSP 214
+ ++L CT L++ + P
Sbjct: 185 LAARGAQAVILGCTEITLLIKAEDSVLP 212
>gi|221633082|ref|YP_002522307.1| aspartate racemase [Thermomicrobium roseum DSM 5159]
gi|221156758|gb|ACM05885.1| aspartate racemase [Thermomicrobium roseum DSM 5159]
Length = 245
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 78/248 (31%), Gaps = 43/248 (17%)
Query: 10 KKLQNSILIFDSGIGGL-IV--LQKMRFLMPEYHFIYVADDVGF-------PYGNWEDHA 59
++ I I G+G L V +K+ P D P +
Sbjct: 1 MTRRSIIGIL-GGMGPLATVDLYRKIIEATPAER-----DQDHLHVIIDADP-------S 47
Query: 60 LKKRLMFLFS-------------DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLG 106
+ R L + L++ V+ CNTA + +R++
Sbjct: 48 IPDRTAALLTGGPDPTPWLLAGAQRLERAGADFIVVPCNTAHAFLPR-VRASISIPILSM 106
Query: 107 AVPAIKQAAAYTQS-GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEY 165
++AAA + ++ +L+TP T+ + +C + +
Sbjct: 107 IAATAERAAAVAPTGSVVGLLATPGTIASRLYQQALAERRLRCIVPDPQWQERVTEAIAL 166
Query: 166 ACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDS 225
+ + E+ + + ++L CT P++ ++ V LD +
Sbjct: 167 VKAGR-TDREVAALVLETGRQLIAHGAAALILGCTELPIVFP-ITEV---SVPVLDATRI 221
Query: 226 IARRARCL 233
+A A +
Sbjct: 222 LAETAVRI 229
>gi|332344731|gb|AEE58065.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 230
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 54/168 (32%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + ++ + S+ FL A +A +
Sbjct: 63 ILAEAAFGLQRAGAEGIVLCTNTMHKV--ADVIESRCSLPFLHIADATGRAITGAGMTRV 120
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 121 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYYAQ 180
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 181 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLP----VFDTAAIHAEDA 224
>gi|116492431|ref|YP_804166.1| aspartate racemase [Pediococcus pentosaceus ATCC 25745]
gi|116102581|gb|ABJ67724.1| Aspartate racemase [Pediococcus pentosaceus ATCC 25745]
Length = 235
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/163 (18%), Positives = 54/163 (33%), Gaps = 9/163 (5%)
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-GLISILSTPATLRR 134
P VIACNTA D+L+ +K + I I+ TP T
Sbjct: 76 NPAFFVIACNTAH-FFYDDLQKATDVPIVHMPRETVKHIKEQYPNAKKIGIIGTPGTTSD 134
Query: 135 TYTSNLIHSYVSQCHIHLVSSMILAS-RVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTD 193
+ + + + L S + + + + E+ I +E + D
Sbjct: 135 GIYDRELLAEGFEVVKPTKAIQDLTSKLIFDDIKEQNLVDAELFYHILKMMVE--EQGAD 192
Query: 194 VIVLACTHYPLIVHVFRQ----LSPWPVDWLDNSDSIARRARC 232
V++L CT + ++ +D S +A + R
Sbjct: 193 VVILGCTELSYAQEMAHDHSFPVADSQSVLVDKSIEMALKLRK 235
>gi|167040409|ref|YP_001663394.1| Asp/Glu racemase [Thermoanaerobacter sp. X514]
gi|256752253|ref|ZP_05493116.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter ethanolicus CCSD1]
gi|300914493|ref|ZP_07131809.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter sp. X561]
gi|307724271|ref|YP_003904022.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter sp. X513]
gi|166854649|gb|ABY93058.1| Asp/Glu racemase [Thermoanaerobacter sp. X514]
gi|256748821|gb|EEU61862.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter ethanolicus CCSD1]
gi|300889428|gb|EFK84574.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter sp. X561]
gi|307581332|gb|ADN54731.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter sp. X513]
Length = 217
Score = 52.7 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/168 (11%), Positives = 57/168 (33%), Gaps = 10/168 (5%)
Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
AL ++++ + D + + + + + + + ++ +P P +
Sbjct: 52 PDALTQKVISIIGDFQKQNIRKVMIYCNSLSAAIDLELVKQKYPD--TNIVTPLQVYHSL 109
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
++ + IL+ + + I V+++ + +E I +
Sbjct: 110 ASRYKRLVILAANG-QSLKTIEKIFYENNPTIQIIGVTTLPVIRAIENLEIPEIIIDKFN 168
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSD 224
++ + + +VL CTH P + Q V +D ++
Sbjct: 169 LADLVP-----KNFNAEGLVLGCTHLPYLKEKLEQKL--NVPIIDPAE 209
>gi|167037747|ref|YP_001665325.1| Asp/Glu racemase [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|320116162|ref|YP_004186321.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|166856581|gb|ABY94989.1| Asp/Glu racemase [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|319929253|gb|ADV79938.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 217
Score = 52.7 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/168 (11%), Positives = 57/168 (33%), Gaps = 10/168 (5%)
Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
AL ++++ + D + + + + + + + ++ +P P +
Sbjct: 52 PDALTQKVISIIGDFQKQNIRKVMIYCNSLSAAIDLELVKQKYPD--TNIVTPLQVYHSL 109
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
++ + IL+ + + I V+++ + +E I +
Sbjct: 110 ASRYKRLVILAANG-QSLKTIEKIFYENNPTIQIIGVTTLPVIRAIENLEIPEIIIDKFN 168
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSD 224
++ + + +VL CTH P + Q V +D ++
Sbjct: 169 LADLVP-----KNFNAEGLVLGCTHLPYLKEKLEQKL--NVPIIDPAE 209
>gi|229491591|ref|ZP_04385412.1| aspartate racemase [Rhodococcus erythropolis SK121]
gi|229321272|gb|EEN87072.1| aspartate racemase [Rhodococcus erythropolis SK121]
Length = 265
Score = 52.7 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 53/177 (29%), Gaps = 10/177 (5%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI--L 126
+ +L + I CNTA + S+ + + + + + S+ L
Sbjct: 88 ARVLRESGATTLAIPCNTAHAFLPAI--SSQLGHPVVHMIDEVARHIRTLSPAVTSVGLL 145
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVS-SMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
+T T+R + Y + + L + ++ K + +
Sbjct: 146 ATTGTVRTGLYQQWLSEYSIDVLVPGPAIQDELVMPAIRAIKSGNVGDETTDKLVRAADL 205
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
V+V CT PL + +D + +AR + H +
Sbjct: 206 -LVESGAQVVVAGCTEIPLGLP----ADATTCQIIDPATILARALLRRVADARRHPS 257
>gi|293605594|ref|ZP_06687974.1| aspartate racemase [Achromobacter piechaudii ATCC 43553]
gi|292815974|gb|EFF75075.1| aspartate racemase [Achromobacter piechaudii ATCC 43553]
Length = 247
Score = 52.7 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 56/166 (33%), Gaps = 12/166 (7%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILS 127
L++ L I CNTA D + + L + A+ G I ++
Sbjct: 74 RFLEQAGAQLIAIPCNTAHLWYHDI--AAATGVPVLHIIQAVIDDLRRLGLPKGRIGLMG 131
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEY--ACGIKIKEDEIKKEIEGCFI 185
T ATL+ + + +C + R + +E C
Sbjct: 132 TAATLKLGLYQKHLLAQGYECIV---PDDDEVERYCMGSIRAVKGNRLEEAFAPAAECIS 188
Query: 186 EKEGKRTDVIVLACTHYPLIVHV-FRQLSPWPVDWLDNSDSIARRA 230
+ + D +VL CT PL V R V D+ D++AR A
Sbjct: 189 RLKARGADAVVLGCTELPLAVPHALRASLG--VTLTDSIDALARAA 232
>gi|293449164|ref|ZP_06663585.1| aspartate racemase [Escherichia coli B088]
gi|300815740|ref|ZP_07095964.1| aspartate racemase [Escherichia coli MS 107-1]
gi|291322254|gb|EFE61683.1| aspartate racemase [Escherichia coli B088]
gi|300531669|gb|EFK52731.1| aspartate racemase [Escherichia coli MS 107-1]
gi|323183385|gb|EFZ68782.1| aspartate racemase family protein [Escherichia coli 1357]
gi|323946524|gb|EGB42548.1| Asp/Glu/Hydantoin racemase [Escherichia coli H120]
Length = 230
Score = 52.7 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 54/168 (32%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + ++ FL A +A +
Sbjct: 63 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCTLPFLHIADATGRAITGAGMTRV 120
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L+ + C I +++ + + +
Sbjct: 121 ALLGTRYTMEQDFYRGRLMEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYYAQ 180
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 181 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLP----VFDTAAIHAEDA 224
>gi|317129519|ref|YP_004095801.1| aspartate racemase [Bacillus cellulosilyticus DSM 2522]
gi|315474467|gb|ADU31070.1| aspartate racemase [Bacillus cellulosilyticus DSM 2522]
Length = 236
Score = 52.7 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/165 (13%), Positives = 52/165 (31%), Gaps = 8/165 (4%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISIL-- 126
+ L+ +I C+TA EL+ + + T++ +L
Sbjct: 71 AKTLEAAGADFIIIPCHTAH-YWFRELQDQLNIPIINMIDNTVNYINSLTKNESQKVLIL 129
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T T+ N + + S+ ++ ++ + ++
Sbjct: 130 ATRGTIYSKIFQNEFMIKRIPYVVPNSEEQEIVSKAIDFTKSNLVETNPYISKLNNMIDN 189
Query: 187 KE-GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
G I+ CT L++ +D+S +A+RA
Sbjct: 190 YITGNHITCILAGCTEISLLLPYLTHKCSK----IDSSLLLAKRA 230
>gi|116513165|ref|YP_812072.1| aspartate racemase [Lactococcus lactis subsp. cremoris SK11]
gi|125625258|ref|YP_001033741.1| RacD protein [Lactococcus lactis subsp. cremoris MG1363]
gi|116108819|gb|ABJ73959.1| Aspartate racemase [Lactococcus lactis subsp. cremoris SK11]
gi|124494066|emb|CAL99067.1| RacD protein [Lactococcus lactis subsp. cremoris MG1363]
gi|300072068|gb|ADJ61468.1| aspartate racemase [Lactococcus lactis subsp. cremoris NZ9000]
Length = 240
Score = 52.3 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/176 (14%), Positives = 55/176 (31%), Gaps = 7/176 (3%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY-TQSGLISILST 128
I + P V+ CNTA DE++ A+ + + + +++L+T
Sbjct: 70 KIHSQLSPKFFVVPCNTAH-YYFDEMQKATEIPILHMPRIAVDSIGRHFSDAKRVAVLAT 128
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED-EIKKEIEGCFIEK 187
T+ + + I +R+ + E+ EI K
Sbjct: 129 EGTILTGVYREALEEQGYEAVIPDEELQEKVNRLIYQEVKENRNLNFELYHEILSDVASK 188
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
+V +L CT ++ + + +D R ++ + +
Sbjct: 189 MN--CEVTILGCTELSVLYDAYD--LTKEYNIIDAQAETVHRTLSMMGKNDLLDDN 240
>gi|300813990|ref|ZP_07094283.1| Asp/Glu/Hydantoin racemase [Peptoniphilus sp. oral taxon 836 str.
F0141]
gi|300511884|gb|EFK39091.1| Asp/Glu/Hydantoin racemase [Peptoniphilus sp. oral taxon 836 str.
F0141]
Length = 217
Score = 52.3 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/200 (14%), Positives = 65/200 (32%), Gaps = 21/200 (10%)
Query: 42 IYVADDVGFPYGNWEDHALKKRLMFLFSDILDK-------YQPVLSVIACNTAFTLIKDE 94
++AD E L+ + + I CN+ + +
Sbjct: 30 FFLADS------PKEQSRLQYYSKDMLEKKFKNLSRQALSWGAEKFFIYCNSLSAAL--D 81
Query: 95 LRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVS 154
++ + P + I IL+ A Y + I S +I +
Sbjct: 82 VKRLSKELDIQIICPFDVYENLDEKYKNIFILAANAL--AAYKEDEILSKTFHRNIISMG 139
Query: 155 SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRT--DVIVLACTHYPLIVHVFRQL 212
++ + +E +I E K + + ++ I+L CTH+P + ++
Sbjct: 140 NLSIVENIEVDTPAEEIIEKLNLKGLMNYINNIKDEKYKIQAIILGCTHFPYLKDELKKY 199
Query: 213 SPWPVDWLDNSDSIARRARC 232
+ +D +D + + + +
Sbjct: 200 T--SIDIIDPATEMIKLLKN 217
>gi|261492724|ref|ZP_05989272.1| putative aspartate racemase [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261495661|ref|ZP_05992107.1| putative aspartate racemase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261308768|gb|EEY10025.1| putative aspartate racemase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261311577|gb|EEY12732.1| putative aspartate racemase [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 231
Score = 51.9 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/198 (14%), Positives = 68/198 (34%), Gaps = 19/198 (9%)
Query: 46 DDVGFPYGNWEDHALKKRLMFLFS-------------DILDKYQPVLSVIACNTAFTLIK 92
D P + R ++ + + L+ +IACNTA
Sbjct: 33 DQAHIPLLISSIPDIPDRTRYILANGENPAPVMEKYIEGLESAGATCIIIACNTAH-YWF 91
Query: 93 DELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHL 152
+ L++ + L + + + +L+T ATL + +
Sbjct: 92 EHLKA-KSQVEMLSMIDCVVDEVLKCGKRRVGLLATDATLAVELYKKQLEAQGLTFICPT 150
Query: 153 VSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQL 212
+ ++ ++ + + E +VI+L CT P+I+ +++
Sbjct: 151 ENGQKAVMDSIYLLKSGEL--EKATELMLQQRDELIRLGAEVIILGCTEVPIILA--QEI 206
Query: 213 SPWPVDWLDNSDSIARRA 230
P+ ++D++ + ++A
Sbjct: 207 EREPMRYVDSTLVLVKKA 224
>gi|331654323|ref|ZP_08355323.1| putative resistance protein [Escherichia coli M718]
gi|331047705|gb|EGI19782.1| putative resistance protein [Escherichia coli M718]
Length = 230
Score = 51.9 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/168 (13%), Positives = 53/168 (31%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + ++ FL A +A +
Sbjct: 63 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCTLPFLHIADATGRAITGAGMTRV 120
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 121 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYYAQ 180
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L++ R + P D + A A
Sbjct: 181 VIARLAEQGAQGVIFGCTEIGLLMPEERSVLP----VFDTAAIHAEDA 224
>gi|119945765|ref|YP_943445.1| aspartate racemase [Psychromonas ingrahamii 37]
gi|119864369|gb|ABM03846.1| aspartate racemase [Psychromonas ingrahamii 37]
Length = 229
Score = 51.9 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/173 (12%), Positives = 51/173 (29%), Gaps = 7/173 (4%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
++ + + +I NT + ++ + L A +
Sbjct: 61 AEILIEAAKNVQSAGADFLLICTNTMHKVAPQIEKAI--DIPLLHIADATAEVLVKNGIK 118
Query: 122 LISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
+ +L T T+ + + L +Y + + V + K E
Sbjct: 119 TVGLLGTAFTMEQDFYKSRLSENYGLTVLVPNEIDRAIIHNVIYKELCLGKMLPASKVEY 178
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+ + ++L CT ++V + V LD + A++A
Sbjct: 179 LRIIESLANQGAEAVILGCTEIGMLVEQ----ADTKVTLLDTAAIHAQKAVEY 227
>gi|218706334|ref|YP_002413853.1| putative racemase [Escherichia coli UMN026]
gi|218433431|emb|CAR14333.1| putative racemase [Escherichia coli UMN026]
Length = 355
Score = 51.9 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 53/168 (31%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + S+ FL A +A +
Sbjct: 188 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCSLPFLHIADATGRAITGAGMTRV 245
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 246 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYYAQ 305
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 306 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLP----VFDTAAIHAEDA 349
>gi|326392486|ref|ZP_08213869.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter ethanolicus JW 200]
gi|325991473|gb|EGD50082.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter ethanolicus JW 200]
Length = 96
Score = 51.9 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 35/96 (36%), Gaps = 3/96 (3%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
+ + + VIACNT +I +S + + F + AA YT + I ++T T
Sbjct: 1 MREQKVKAVVIACNTTCAVIN---KSEYDVVLFDVLKAGAESAALYTINKKIGAIATTRT 57
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC 167
+ I ++ + +E+
Sbjct: 58 VESKSYEKNIKIIDKNIEVYQKACPEFVPLIEKGYI 93
>gi|297518306|ref|ZP_06936692.1| putative racemase [Escherichia coli OP50]
Length = 230
Score = 51.9 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 54/168 (32%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + ++ FL A +A A +
Sbjct: 63 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCTLPFLHIADATGRAIAGAGMTRV 120
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 121 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYYAQ 180
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 181 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLP----VFDTAAIHAEDA 224
>gi|294102668|ref|YP_003554526.1| aspartate racemase [Aminobacterium colombiense DSM 12261]
gi|293617648|gb|ADE57802.1| aspartate racemase [Aminobacterium colombiense DSM 12261]
Length = 237
Score = 51.9 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 50/167 (29%), Gaps = 7/167 (4%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L ++ + + CNTA D R P ++ AA ++ +L+T T
Sbjct: 78 LARWGADILAVPCNTAH-YFIDSFREELPVPFVHIIEATVELAAERSR-EGAWLLATSGT 135
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
R + E + E ++G + +R
Sbjct: 136 KRSGMYERYAEKKGYPFFLPTEEDQGKVQ--ETIILVKANRLREAGLLLQGVVEKLWKER 193
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
IV ACT PL + + + ++A LL N
Sbjct: 194 EVPIVAACTELPLAYDASDL---PELGMVSSLGALAEGCLRLLYSNN 237
>gi|158428132|pdb|2DX7|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Ot3 Aspartate
Racemase Complex With Citric Acid
gi|158428133|pdb|2DX7|B Chain B, Crystal Structure Of Pyrococcus Horikoshii Ot3 Aspartate
Racemase Complex With Citric Acid
Length = 228
Score = 51.9 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/170 (12%), Positives = 54/170 (31%), Gaps = 9/170 (5%)
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLIS 124
+ + L++ ++ NTA + +++R + + + +
Sbjct: 63 LIWTAKRLEECGADFIIMPANTAHAFV-EDIRKAIK-IPIISMIEETAKKVKELGFKKAG 120
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASR-VEEYACGIKIKEDEIKKEIEGC 183
+L+T T+ Y + R + E +K ++ +
Sbjct: 121 LLATTGTIVSGVYEKEFSKYGVEIMTPTEDEQKDVMRGIYEGVKAGNLKLG--RELLLKT 178
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
E + + I+ CT +++ + V +D D IA A +
Sbjct: 179 AKILEERGAECIIAGCTEVSVVLK--QDDL--KVPLIDPMDVIAEVAVKV 224
>gi|220922696|ref|YP_002497998.1| aspartate racemase [Methylobacterium nodulans ORS 2060]
gi|219947303|gb|ACL57695.1| aspartate racemase [Methylobacterium nodulans ORS 2060]
Length = 236
Score = 51.9 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/164 (16%), Positives = 48/164 (29%), Gaps = 7/164 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
M L+ I CNTA S+ L V A+ Q G I
Sbjct: 60 AMRATVRWLETAGATCIAIPCNTAH--HWHAALQAETSVRILHIVDAV-ADTLAGQGGCI 116
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L+T T++ + C + R ++ E +
Sbjct: 117 GVLATSGTVKAGIYQKRLALRGFSCRTPDAAGQAEVMRAIRLVKAGQLA--EATTILRAQ 174
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
+V+ACT P+ + +D ++++A
Sbjct: 175 AEAMVAAGCRQVVMACTEIPVALATVNGALRSV--LVDATEALA 216
>gi|315289395|gb|EFU48790.1| aspartate racemase [Escherichia coli MS 110-3]
Length = 267
Score = 51.9 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 53/168 (31%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + S+ FL A +A +
Sbjct: 100 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCSLPFLHIADATGRAITGAGMTRV 157
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 158 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYYAQ 217
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 218 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLP----VFDTAAIHAEDA 261
>gi|324005610|gb|EGB74829.1| aspartate racemase [Escherichia coli MS 57-2]
Length = 262
Score = 51.9 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 53/168 (31%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + S+ FL A +A +
Sbjct: 95 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCSLPFLHIADATGRAITGAGMTRV 152
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 153 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYYAQ 212
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 213 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLP----VFDTAAIHAEDA 256
>gi|300898098|ref|ZP_07116464.1| aspartate racemase [Escherichia coli MS 198-1]
gi|300358156|gb|EFJ74026.1| aspartate racemase [Escherichia coli MS 198-1]
gi|315293828|gb|EFU53180.1| aspartate racemase [Escherichia coli MS 153-1]
Length = 263
Score = 51.9 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 53/168 (31%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + S+ FL A +A +
Sbjct: 96 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCSLPFLHIADATGRAITGAGMTRV 153
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 154 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYYAQ 213
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 214 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLP----VFDTAAIHAEDA 257
>gi|310778942|ref|YP_003967275.1| aspartate racemase [Ilyobacter polytropus DSM 2926]
gi|309748265|gb|ADO82927.1| aspartate racemase [Ilyobacter polytropus DSM 2926]
Length = 233
Score = 51.9 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/173 (16%), Positives = 54/173 (31%), Gaps = 9/173 (5%)
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY-TQ 119
K ++ L + ++ CNTA EL K+ +
Sbjct: 60 VKYMLEAALK-LQVMGSDVIIMPCNTAH-YFYKELTEHLTIPFINMIEETAKEIKEIDPE 117
Query: 120 SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKE 179
+ I + ST T + + +Y + S + + + I K
Sbjct: 118 TKKIFLFSTQGTYKAKIYDKVFENYGLEILRPEKSVQSVVTDIIYSIKKGDTALKNIDKN 177
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232
I +IE + I+L CT P+ + + +D + +A+ A
Sbjct: 178 ILTSYIESIEGKN--IILGCTELPVAFD----ILGIKKNCIDPTKILAKSAIR 224
>gi|293416084|ref|ZP_06658724.1| aspartate racemase [Escherichia coli B185]
gi|291432273|gb|EFF05255.1| aspartate racemase [Escherichia coli B185]
Length = 230
Score = 51.9 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 53/168 (31%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + ++ FL A +A +
Sbjct: 63 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCTLPFLHIADATGRAITGAGMTRV 120
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 121 ALLGTRYTMEQDFYRGRLTEQFAINCLIPEADERAKINQIIFEELCLGQFTEASRTYYAQ 180
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 181 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLP----VFDTAAIHAEDA 224
>gi|281179865|dbj|BAI56195.1| conserved hypothetical protein [Escherichia coli SE15]
Length = 230
Score = 51.9 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 53/168 (31%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + S+ FL A +A +
Sbjct: 63 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCSLPFLHIADATGRAITGAGMTRV 120
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 121 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADDRAKINQIIFEELCLGQFTEASRAYYAQ 180
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 181 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLP----VFDTAAIHAEDA 224
>gi|161504935|ref|YP_001572047.1| hypothetical protein SARI_03065 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160866282|gb|ABX22905.1| hypothetical protein SARI_03065 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 244
Score = 51.9 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/188 (15%), Positives = 63/188 (33%), Gaps = 7/188 (3%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R + + +L+ VI CNTA D+L++ + + + A + + +
Sbjct: 62 RYLERYLHMLEDAGAECIVIPCNTAH-YWFDDLQNVAKA-RMISILDATLEDIPPS-ARH 118
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +L+T ATL ++ + L + + + +
Sbjct: 119 VGLLATNATLATGLYQKKAQAHGLTLIQPEDAGQALVMQAIYTLKRG--DKPAAQALLLP 176
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ I++ CT PLIV + +D++ S+ R A +
Sbjct: 177 QIDSLVARGVQAIIMGCTEIPLIVAGYEDAV--ACPMIDSTASLVRAAIRWYESWPDTRA 234
Query: 243 RVFDDHAL 250
V + L
Sbjct: 235 TVAGEQRL 242
>gi|16130744|ref|NP_417317.1| conserved protein, Asp/Glu_racemase family [Escherichia coli str.
K-12 substr. MG1655]
gi|89109623|ref|AP_003403.1| predicted racemase [Escherichia coli str. K-12 substr. W3110]
gi|170082408|ref|YP_001731728.1| racemase [Escherichia coli str. K-12 substr. DH10B]
gi|238901976|ref|YP_002927772.1| putative racemase [Escherichia coli BW2952]
gi|140681|sp|P03813|YGEA_ECOLI RecName: Full=Uncharacterized protein YgeA
gi|145322|gb|AAA23470.1| ORF X [Escherichia coli]
gi|882733|gb|AAB40487.1| alternate name ygeA; orfX of J03732; ORF_f230 [Escherichia coli
str. K-12 substr. MG1655]
gi|1128956|gb|AAA83863.1| unknown protein [Escherichia coli]
gi|1789205|gb|AAC75879.1| conserved protein, Asp/Glu_racemase family [Escherichia coli str.
K-12 substr. MG1655]
gi|85675656|dbj|BAE76909.1| predicted racemase [Escherichia coli str. K12 substr. W3110]
gi|169890243|gb|ACB03950.1| predicted racemase [Escherichia coli str. K-12 substr. DH10B]
gi|238863065|gb|ACR65063.1| predicted racemase [Escherichia coli BW2952]
gi|260448111|gb|ACX38533.1| aspartate racemase [Escherichia coli DH1]
gi|315137444|dbj|BAJ44603.1| putative racemase [Escherichia coli DH1]
Length = 230
Score = 51.9 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 53/168 (31%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + ++ FL A +A +
Sbjct: 63 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCTLPFLHIADATGRAITGAGMTRV 120
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 121 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYCAQ 180
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 181 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLP----VFDTAAIHAEDA 224
>gi|315295750|gb|EFU55067.1| aspartate racemase [Escherichia coli MS 16-3]
Length = 269
Score = 51.9 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 53/168 (31%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + S+ FL A +A +
Sbjct: 102 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCSLPFLHIADATGRAITGAGMTRV 159
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 160 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYYAQ 219
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 220 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLP----VFDTAAIHAEDA 263
>gi|301049366|ref|ZP_07196330.1| aspartate racemase [Escherichia coli MS 185-1]
gi|300298808|gb|EFJ55193.1| aspartate racemase [Escherichia coli MS 185-1]
Length = 269
Score = 51.9 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 53/168 (31%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + S+ FL A +A +
Sbjct: 102 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCSLPFLHIADATGRAITGAGMTRV 159
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 160 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYYAQ 219
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 220 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLP----VFDTAAIHAEDA 263
>gi|26249272|ref|NP_755312.1| putative racemase [Escherichia coli CFT073]
gi|91212238|ref|YP_542224.1| putative racemase [Escherichia coli UTI89]
gi|117625092|ref|YP_854080.1| putative racemase [Escherichia coli APEC O1]
gi|215488159|ref|YP_002330590.1| putative racemase [Escherichia coli O127:H6 str. E2348/69]
gi|218559852|ref|YP_002392765.1| racemase [Escherichia coli S88]
gi|218690966|ref|YP_002399178.1| putative racemase [Escherichia coli ED1a]
gi|218701555|ref|YP_002409184.1| putative racemase [Escherichia coli IAI39]
gi|227888406|ref|ZP_04006211.1| racemase [Escherichia coli 83972]
gi|237706498|ref|ZP_04536979.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|293406329|ref|ZP_06650255.1| ygeA protein [Escherichia coli FVEC1412]
gi|298382065|ref|ZP_06991662.1| ygeA protein [Escherichia coli FVEC1302]
gi|306812255|ref|ZP_07446453.1| putative racemase [Escherichia coli NC101]
gi|312964883|ref|ZP_07779123.1| aspartate racemase family protein [Escherichia coli 2362-75]
gi|331648601|ref|ZP_08349689.1| putative resistance protein [Escherichia coli M605]
gi|331658988|ref|ZP_08359930.1| putative resistance protein [Escherichia coli TA206]
gi|26109679|gb|AAN81882.1|AE016765_284 Hypothetical protein ygeA [Escherichia coli CFT073]
gi|91073812|gb|ABE08693.1| hypothetical protein YgeA [Escherichia coli UTI89]
gi|115514216|gb|ABJ02291.1| conserved hypothetical protein [Escherichia coli APEC O1]
gi|215266231|emb|CAS10658.1| predicted racemase [Escherichia coli O127:H6 str. E2348/69]
gi|218366621|emb|CAR04375.1| putative racemase [Escherichia coli S88]
gi|218371541|emb|CAR19379.1| putative racemase [Escherichia coli IAI39]
gi|218428530|emb|CAR09457.2| putative racemase [Escherichia coli ED1a]
gi|222034555|emb|CAP77297.1| Uncharacterized protein ygeA [Escherichia coli LF82]
gi|226899538|gb|EEH85797.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|227834675|gb|EEJ45141.1| racemase [Escherichia coli 83972]
gi|284922777|emb|CBG35865.1| putative Asp/Glu/Hydantoin racemase [Escherichia coli 042]
gi|291426335|gb|EFE99367.1| ygeA protein [Escherichia coli FVEC1412]
gi|294489793|gb|ADE88549.1| aspartate racemase family protein [Escherichia coli IHE3034]
gi|298277205|gb|EFI18721.1| ygeA protein [Escherichia coli FVEC1302]
gi|305854293|gb|EFM54731.1| putative racemase [Escherichia coli NC101]
gi|307554835|gb|ADN47610.1| aspartate racemase family protein [Escherichia coli ABU 83972]
gi|307625568|gb|ADN69872.1| putative racemase [Escherichia coli UM146]
gi|312290439|gb|EFR18319.1| aspartate racemase family protein [Escherichia coli 2362-75]
gi|312947392|gb|ADR28219.1| putative racemase [Escherichia coli O83:H1 str. NRG 857C]
gi|320194976|gb|EFW69605.1| Aspartate racemase [Escherichia coli WV_060327]
gi|323188743|gb|EFZ74028.1| aspartate racemase family protein [Escherichia coli RN587/1]
gi|323951702|gb|EGB47577.1| Asp/Glu/Hydantoin racemase [Escherichia coli H252]
gi|323957420|gb|EGB53142.1| Asp/Glu/Hydantoin racemase [Escherichia coli H263]
gi|330908893|gb|EGH37407.1| aspartate racemase [Escherichia coli AA86]
gi|331042348|gb|EGI14490.1| putative resistance protein [Escherichia coli M605]
gi|331053570|gb|EGI25599.1| putative resistance protein [Escherichia coli TA206]
Length = 230
Score = 51.9 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 53/168 (31%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + S+ FL A +A +
Sbjct: 63 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCSLPFLHIADATGRAITGAGMTRV 120
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 121 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYYAQ 180
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 181 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLP----VFDTAAIHAEDA 224
>gi|300980448|ref|ZP_07175003.1| aspartate racemase [Escherichia coli MS 45-1]
gi|300409255|gb|EFJ92793.1| aspartate racemase [Escherichia coli MS 45-1]
Length = 268
Score = 51.9 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 53/168 (31%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + S+ FL A +A +
Sbjct: 101 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCSLPFLHIADATGRAITGAGMTRV 158
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 159 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYYAQ 218
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 219 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLP----VFDTAAIHAEDA 262
>gi|52140751|ref|YP_086078.1| aspartate racemase [Bacillus cereus E33L]
gi|51974220|gb|AAU15770.1| aspartate racemase [Bacillus cereus E33L]
Length = 224
Score = 51.9 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 62/165 (37%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA ++ RS S+ L V +A T +++L+T
Sbjct: 67 AQKLESTGASFIAMPCNTAHLYFEELQRSL--SIPILNIVDETLKAIPETAKK-VALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + + + G E +E+ + +
Sbjct: 124 EATVQSGIYQDGIAKRNIEYIHYEQWQESINQIITYIKSGEV----EEARELWSALVLQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D +++ACT ++ + D++D+S +A+ +
Sbjct: 180 KDEVDTVIIACTDLNVVANE---------DFVDSSQCLAKAVVRM 215
>gi|71083965|ref|YP_266685.1| aspartate racemase [Candidatus Pelagibacter ubique HTCC1062]
gi|71063078|gb|AAZ22081.1| Aspartate racemase [Candidatus Pelagibacter ubique HTCC1062]
Length = 248
Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/166 (18%), Positives = 58/166 (34%), Gaps = 8/166 (4%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISIL 126
L+K VI CNTA ++LR + + + + ++ I +L
Sbjct: 81 CKSLEKSGCKFIVIPCNTAH-YWYEDLRKKIK-IPIINMPKEVFIQTKKSCKKNSKIGLL 138
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T TL+ + ++ ++ IK E K I+
Sbjct: 139 ATEGTLKTEIYDKIFKKDYVLIKPLSNLQTSSVNKTIKHVKMGNIKLAE--KTIKPAIKY 196
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD--WLDNSDSIARRA 230
++ I+L CT P+ + ++ L V +LD + +A
Sbjct: 197 LIKQKCKKIILGCTEIPIAIFAYKSLQNAKVSKLYLDPNLILANSC 242
>gi|15803360|ref|NP_289393.1| putative racemase [Escherichia coli O157:H7 EDL933]
gi|12517329|gb|AAG57952.1|AE005512_11 putative resistance proteins [Escherichia coli O157:H7 str. EDL933]
Length = 230
Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 53/168 (31%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + ++ FL A +A +
Sbjct: 63 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCTLPFLHIADATGRAITGAGMTRV 120
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 121 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQXTEASRAYYAQ 180
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 181 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLP----VFDTAAIHAEDA 224
>gi|323966822|gb|EGB62253.1| Asp/Glu/Hydantoin racemase [Escherichia coli M863]
gi|323978543|gb|EGB73625.1| Asp/Glu/Hydantoin racemase [Escherichia coli TW10509]
gi|327251588|gb|EGE63274.1| aspartate racemase family protein [Escherichia coli STEC_7v]
Length = 230
Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 53/168 (31%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + S+ FL A +A +
Sbjct: 63 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCSLPFLHIADATGRAIIRAGMTRV 120
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 121 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRTYYAQ 180
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 181 VIARLAEQGAQGVIFGCTEIGLLVPDERSVLP----VFDTAAIHAEDA 224
>gi|300923174|ref|ZP_07139230.1| aspartate racemase [Escherichia coli MS 182-1]
gi|300420534|gb|EFK03845.1| aspartate racemase [Escherichia coli MS 182-1]
Length = 249
Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 53/168 (31%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + ++ FL A +A +
Sbjct: 82 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCTLPFLHIADATGRAITGAGMTRV 139
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 140 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYYAQ 199
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 200 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLP----VFDTAAIHAEDA 243
>gi|218905985|ref|YP_002453819.1| probable amino-acid racemase [Bacillus cereus AH820]
gi|218539387|gb|ACK91785.1| probable amino-acid racemase [Bacillus cereus AH820]
Length = 224
Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 63/165 (38%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L +EL+ + S+ L V +A T + +++L+T
Sbjct: 67 AQKLESTGASFIAMPCNTAH-LYFEELQQSL-SIPILNIVDETLKAIPET-AKRVALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + + + G E +E+ + +
Sbjct: 124 EATVQSGIYQDGIAKRNIEYIHYEQWQESINQIITYIKSGEV----EEARELWSALVLQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT ++ D++D+S +A+ +
Sbjct: 180 KDEVDTAIIACTDLNVLASE---------DFVDSSQCLAKAVVRM 215
>gi|301326170|ref|ZP_07219556.1| aspartate racemase [Escherichia coli MS 78-1]
gi|300847135|gb|EFK74895.1| aspartate racemase [Escherichia coli MS 78-1]
Length = 252
Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 53/168 (31%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + ++ FL A +A +
Sbjct: 85 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCTLPFLHIADATGRAITGAGMTRV 142
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 143 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYYAQ 202
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 203 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLP----VFDTAAIHAEDA 246
>gi|170681384|ref|YP_001745009.1| putative racemase [Escherichia coli SMS-3-5]
gi|293412186|ref|ZP_06654909.1| racemase [Escherichia coli B354]
gi|170519102|gb|ACB17280.1| aspartate racemase family protein [Escherichia coli SMS-3-5]
gi|291468957|gb|EFF11448.1| racemase [Escherichia coli B354]
Length = 230
Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 53/168 (31%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + S+ FL A +A +
Sbjct: 63 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCSLPFLHIADATGRAIIRAGMTRV 120
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 121 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRTYYAQ 180
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 181 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLP----VFDTAAIHAEDA 224
>gi|110806776|ref|YP_690296.1| putative resistance proteins [Shigella flexneri 5 str. 8401]
gi|110616324|gb|ABF04991.1| putative resistance proteins [Shigella flexneri 5 str. 8401]
Length = 337
Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 53/168 (31%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + ++ FL A +A +
Sbjct: 170 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCTLPFLHIADATGRAITGAGMTRV 227
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 228 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYYAQ 287
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 288 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLP----VFDTAAIHAEDA 331
>gi|256024658|ref|ZP_05438523.1| putative racemase [Escherichia sp. 4_1_40B]
Length = 230
Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 53/168 (31%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + ++ FL A +A +
Sbjct: 63 ILAEAALGLQRTGAEGIVLCTNTMHKV--ADAIESRCTLPFLHIADATGRAITGAGMTRV 120
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 121 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYYAQ 180
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 181 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLP----VFDTAAIHAEDA 224
>gi|168785666|ref|ZP_02810673.1| aspartate racemase family protein [Escherichia coli O157:H7 str.
EC869]
gi|261226139|ref|ZP_05940420.1| predicted racemase [Escherichia coli O157:H7 str. FRIK2000]
gi|261256605|ref|ZP_05949138.1| putative racemase [Escherichia coli O157:H7 str. FRIK966]
gi|189374059|gb|EDU92475.1| aspartate racemase family protein [Escherichia coli O157:H7 str.
EC869]
Length = 230
Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 53/168 (31%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + ++ FL A +A +
Sbjct: 63 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCTLPFLHIADATGRAITGAGMTRV 120
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 121 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYYAQ 180
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 181 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLP----VFDTAAIHAEDA 224
>gi|300920302|ref|ZP_07136741.1| aspartate racemase [Escherichia coli MS 115-1]
gi|300412685|gb|EFJ95995.1| aspartate racemase [Escherichia coli MS 115-1]
Length = 262
Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 53/168 (31%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + ++ FL A +A +
Sbjct: 95 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCTLPFLHIADATGRAITGAGMTRV 152
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 153 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYYAQ 212
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 213 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLP----VFDTAAIHAEDA 256
>gi|300936234|ref|ZP_07151167.1| aspartate racemase [Escherichia coli MS 21-1]
gi|300458559|gb|EFK22052.1| aspartate racemase [Escherichia coli MS 21-1]
Length = 266
Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 53/168 (31%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + S+ FL A +A +
Sbjct: 99 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCSLPFLHIADATGRAITGAGMTRV 156
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 157 ALLGTRYTMEQAFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYYAQ 216
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 217 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLP----VFDTAAIHAEDA 260
>gi|300931306|ref|ZP_07146645.1| aspartate racemase [Escherichia coli MS 187-1]
gi|300460890|gb|EFK24383.1| aspartate racemase [Escherichia coli MS 187-1]
Length = 264
Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 53/168 (31%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + ++ FL A +A +
Sbjct: 97 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCTLPFLHIADATGRAITGAGMTRV 154
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 155 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYYAQ 214
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 215 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLP----VFDTAAIHAEDA 258
>gi|193063521|ref|ZP_03044610.1| aspartate racemase family protein [Escherichia coli E22]
gi|194426441|ref|ZP_03058996.1| aspartate racemase family protein [Escherichia coli B171]
gi|260845503|ref|YP_003223281.1| putative racemase [Escherichia coli O103:H2 str. 12009]
gi|192930798|gb|EDV83403.1| aspartate racemase family protein [Escherichia coli E22]
gi|194415749|gb|EDX32016.1| aspartate racemase family protein [Escherichia coli B171]
gi|257760650|dbj|BAI32147.1| predicted racemase [Escherichia coli O103:H2 str. 12009]
gi|323160017|gb|EFZ45981.1| aspartate racemase family protein [Escherichia coli E128010]
Length = 230
Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 53/168 (31%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + ++ FL A +A +
Sbjct: 63 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCTLPFLHIADATGRAITGAGMTRV 120
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 121 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYYAQ 180
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 181 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLP----VFDTAAIHAEDA 224
>gi|15832951|ref|NP_311724.1| racemase [Escherichia coli O157:H7 str. Sakai]
gi|157157912|ref|YP_001464176.1| putative racemase [Escherichia coli E24377A]
gi|157162293|ref|YP_001459611.1| putative racemase [Escherichia coli HS]
gi|168747700|ref|ZP_02772722.1| aspartate racemase family protein [Escherichia coli O157:H7 str.
EC4113]
gi|168753758|ref|ZP_02778765.1| aspartate racemase family protein [Escherichia coli O157:H7 str.
EC4401]
gi|168759949|ref|ZP_02784956.1| aspartate racemase family protein [Escherichia coli O157:H7 str.
EC4501]
gi|168766814|ref|ZP_02791821.1| aspartate racemase family protein [Escherichia coli O157:H7 str.
EC4486]
gi|168775698|ref|ZP_02800705.1| aspartate racemase family protein [Escherichia coli O157:H7 str.
EC4196]
gi|168778835|ref|ZP_02803842.1| aspartate racemase family protein [Escherichia coli O157:H7 str.
EC4076]
gi|168799954|ref|ZP_02824961.1| aspartate racemase family protein [Escherichia coli O157:H7 str.
EC508]
gi|170018917|ref|YP_001723871.1| putative racemase [Escherichia coli ATCC 8739]
gi|187731529|ref|YP_001881419.1| putative racemase [Shigella boydii CDC 3083-94]
gi|191165970|ref|ZP_03027806.1| aspartate racemase family protein [Escherichia coli B7A]
gi|193071423|ref|ZP_03052337.1| aspartate racemase family protein [Escherichia coli E110019]
gi|194439967|ref|ZP_03072027.1| aspartate racemase family protein [Escherichia coli 101-1]
gi|195936444|ref|ZP_03081826.1| putative racemase [Escherichia coli O157:H7 str. EC4024]
gi|208807210|ref|ZP_03249547.1| Asp/Glu/Hydantoin racemase [Escherichia coli O157:H7 str. EC4206]
gi|208813793|ref|ZP_03255122.1| Asp/Glu/Hydantoin racemase [Escherichia coli O157:H7 str. EC4045]
gi|208821520|ref|ZP_03261840.1| Asp/Glu/Hydantoin racemase [Escherichia coli O157:H7 str. EC4042]
gi|209397579|ref|YP_002272304.1| Asp/Glu/Hydantoin racemase [Escherichia coli O157:H7 str. EC4115]
gi|209920288|ref|YP_002294372.1| putative racemase [Escherichia coli SE11]
gi|217327498|ref|ZP_03443581.1| Asp/Glu/Hydantoin racemase [Escherichia coli O157:H7 str. TW14588]
gi|218555389|ref|YP_002388302.1| putative racemase [Escherichia coli IAI1]
gi|218696436|ref|YP_002404103.1| putative racemase [Escherichia coli 55989]
gi|253772305|ref|YP_003035136.1| racemase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254037893|ref|ZP_04871951.1| aspartate racemase [Escherichia sp. 1_1_43]
gi|254162768|ref|YP_003045876.1| putative racemase [Escherichia coli B str. REL606]
gi|254794779|ref|YP_003079616.1| putative racemase [Escherichia coli O157:H7 str. TW14359]
gi|256019364|ref|ZP_05433229.1| putative racemase [Shigella sp. D9]
gi|260856953|ref|YP_003230844.1| putative racemase [Escherichia coli O26:H11 str. 11368]
gi|260869520|ref|YP_003235922.1| putative racemase [Escherichia coli O111:H- str. 11128]
gi|291284167|ref|YP_003500985.1| putative resistance protein [Escherichia coli O55:H7 str. CB9615]
gi|300820630|ref|ZP_07100781.1| aspartate racemase [Escherichia coli MS 119-7]
gi|301026180|ref|ZP_07189648.1| aspartate racemase [Escherichia coli MS 196-1]
gi|307139524|ref|ZP_07498880.1| putative racemase [Escherichia coli H736]
gi|307310549|ref|ZP_07590197.1| aspartate racemase [Escherichia coli W]
gi|309793889|ref|ZP_07688314.1| aspartate racemase [Escherichia coli MS 145-7]
gi|312972939|ref|ZP_07787112.1| aspartate racemase family protein [Escherichia coli 1827-70]
gi|331643526|ref|ZP_08344657.1| putative resistance protein [Escherichia coli H736]
gi|331669573|ref|ZP_08370419.1| putative resistance protein [Escherichia coli TA271]
gi|331678819|ref|ZP_08379493.1| putative resistance protein [Escherichia coli H591]
gi|332280482|ref|ZP_08392895.1| aspartate racemase [Shigella sp. D9]
gi|13363169|dbj|BAB37120.1| putative resistance proteins [Escherichia coli O157:H7 str. Sakai]
gi|157067973|gb|ABV07228.1| aspartate racemase family protein [Escherichia coli HS]
gi|157079942|gb|ABV19650.1| aspartate racemase family protein [Escherichia coli E24377A]
gi|169753845|gb|ACA76544.1| aspartate racemase [Escherichia coli ATCC 8739]
gi|187428521|gb|ACD07795.1| Asp/Glu/Hydantoin racemase [Shigella boydii CDC 3083-94]
gi|187768792|gb|EDU32636.1| aspartate racemase family protein [Escherichia coli O157:H7 str.
EC4196]
gi|188017930|gb|EDU56052.1| aspartate racemase family protein [Escherichia coli O157:H7 str.
EC4113]
gi|189003427|gb|EDU72413.1| aspartate racemase family protein [Escherichia coli O157:H7 str.
EC4076]
gi|189358541|gb|EDU76960.1| aspartate racemase family protein [Escherichia coli O157:H7 str.
EC4401]
gi|189363880|gb|EDU82299.1| aspartate racemase family protein [Escherichia coli O157:H7 str.
EC4486]
gi|189369290|gb|EDU87706.1| aspartate racemase family protein [Escherichia coli O157:H7 str.
EC4501]
gi|189377623|gb|EDU96039.1| aspartate racemase family protein [Escherichia coli O157:H7 str.
EC508]
gi|190903918|gb|EDV63631.1| aspartate racemase family protein [Escherichia coli B7A]
gi|192955240|gb|EDV85729.1| aspartate racemase family protein [Escherichia coli E110019]
gi|194421116|gb|EDX37143.1| aspartate racemase family protein [Escherichia coli 101-1]
gi|208727011|gb|EDZ76612.1| Asp/Glu/Hydantoin racemase [Escherichia coli O157:H7 str. EC4206]
gi|208735070|gb|EDZ83757.1| Asp/Glu/Hydantoin racemase [Escherichia coli O157:H7 str. EC4045]
gi|208741643|gb|EDZ89325.1| Asp/Glu/Hydantoin racemase [Escherichia coli O157:H7 str. EC4042]
gi|209158979|gb|ACI36412.1| Asp/Glu/Hydantoin racemase [Escherichia coli O157:H7 str. EC4115]
gi|209760918|gb|ACI78771.1| putative resistance proteins [Escherichia coli]
gi|209760920|gb|ACI78772.1| putative resistance proteins [Escherichia coli]
gi|209760922|gb|ACI78773.1| putative resistance proteins [Escherichia coli]
gi|209760924|gb|ACI78774.1| putative resistance proteins [Escherichia coli]
gi|209760926|gb|ACI78775.1| putative resistance proteins [Escherichia coli]
gi|209913547|dbj|BAG78621.1| conserved hypothetical protein [Escherichia coli SE11]
gi|217319865|gb|EEC28290.1| Asp/Glu/Hydantoin racemase [Escherichia coli O157:H7 str. TW14588]
gi|218353168|emb|CAU99036.1| putative racemase [Escherichia coli 55989]
gi|218362157|emb|CAQ99766.1| putative racemase [Escherichia coli IAI1]
gi|226839517|gb|EEH71538.1| aspartate racemase [Escherichia sp. 1_1_43]
gi|242378388|emb|CAQ33166.1| predicted racemase [Escherichia coli BL21(DE3)]
gi|253323349|gb|ACT27951.1| aspartate racemase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253974669|gb|ACT40340.1| predicted racemase [Escherichia coli B str. REL606]
gi|253978834|gb|ACT44504.1| predicted racemase [Escherichia coli BL21(DE3)]
gi|254594179|gb|ACT73540.1| predicted racemase [Escherichia coli O157:H7 str. TW14359]
gi|257755602|dbj|BAI27104.1| predicted racemase [Escherichia coli O26:H11 str. 11368]
gi|257765876|dbj|BAI37371.1| predicted racemase [Escherichia coli O111:H- str. 11128]
gi|290764040|gb|ADD58001.1| Putative resistance protein [Escherichia coli O55:H7 str. CB9615]
gi|299879807|gb|EFI88018.1| aspartate racemase [Escherichia coli MS 196-1]
gi|300526894|gb|EFK47963.1| aspartate racemase [Escherichia coli MS 119-7]
gi|306909444|gb|EFN39939.1| aspartate racemase [Escherichia coli W]
gi|308122296|gb|EFO59558.1| aspartate racemase [Escherichia coli MS 145-7]
gi|309703195|emb|CBJ02529.1| putative Asp/Glu/Hydantoin racemase [Escherichia coli ETEC H10407]
gi|310332881|gb|EFQ00095.1| aspartate racemase family protein [Escherichia coli 1827-70]
gi|315062147|gb|ADT76474.1| predicted racemase [Escherichia coli W]
gi|315615228|gb|EFU95865.1| aspartate racemase family protein [Escherichia coli 3431]
gi|320185571|gb|EFW60336.1| Aspartate racemase [Shigella flexneri CDC 796-83]
gi|320189170|gb|EFW63829.1| Aspartate racemase [Escherichia coli O157:H7 str. EC1212]
gi|320202481|gb|EFW77051.1| Aspartate racemase [Escherichia coli EC4100B]
gi|320640488|gb|EFX10027.1| putative racemase [Escherichia coli O157:H7 str. G5101]
gi|320645734|gb|EFX14719.1| putative racemase [Escherichia coli O157:H- str. 493-89]
gi|320651034|gb|EFX19474.1| putative racemase [Escherichia coli O157:H- str. H 2687]
gi|320656530|gb|EFX24426.1| putative racemase [Escherichia coli O55:H7 str. 3256-97 TW 07815]
gi|320667124|gb|EFX34087.1| putative racemase [Escherichia coli O157:H7 str. LSU-61]
gi|323154818|gb|EFZ41012.1| aspartate racemase family protein [Escherichia coli EPECa14]
gi|323167949|gb|EFZ53639.1| aspartate racemase family protein [Shigella sonnei 53G]
gi|323180277|gb|EFZ65829.1| aspartate racemase family protein [Escherichia coli 1180]
gi|323377273|gb|ADX49541.1| aspartate racemase [Escherichia coli KO11]
gi|323935800|gb|EGB32103.1| Asp/Glu/Hydantoin racemase [Escherichia coli E1520]
gi|323941550|gb|EGB37731.1| Asp/Glu/Hydantoin racemase [Escherichia coli E482]
gi|323960716|gb|EGB56339.1| Asp/Glu/Hydantoin racemase [Escherichia coli H489]
gi|323971630|gb|EGB66860.1| Asp/Glu/Hydantoin racemase [Escherichia coli TA007]
gi|324016304|gb|EGB85523.1| aspartate racemase [Escherichia coli MS 117-3]
gi|324119880|gb|EGC13759.1| Asp/Glu/Hydantoin racemase [Escherichia coli E1167]
gi|326339091|gb|EGD62906.1| Aspartate racemase [Escherichia coli O157:H7 str. 1044]
gi|326343027|gb|EGD66795.1| Aspartate racemase [Escherichia coli O157:H7 str. 1125]
gi|331036997|gb|EGI09221.1| putative resistance protein [Escherichia coli H736]
gi|331063241|gb|EGI35154.1| putative resistance protein [Escherichia coli TA271]
gi|331073649|gb|EGI44970.1| putative resistance protein [Escherichia coli H591]
gi|332102834|gb|EGJ06180.1| aspartate racemase [Shigella sp. D9]
Length = 230
Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 53/168 (31%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + ++ FL A +A +
Sbjct: 63 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCTLPFLHIADATGRAITGAGMTRV 120
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 121 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYYAQ 180
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 181 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLP----VFDTAAIHAEDA 224
>gi|320662049|gb|EFX29450.1| putative racemase [Escherichia coli O55:H7 str. USDA 5905]
Length = 230
Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 54/168 (32%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + ++ FL A +A +
Sbjct: 63 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCTLPFLHIADATGRAITGAGMTRV 120
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 121 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYYAQ 180
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
G+ ++ CT L+V R + P D + A A
Sbjct: 181 VIARLAGQGAQGVIFGCTEIGLLVPEERSVLP----VFDTAAIHAEDA 224
>gi|24114119|ref|NP_708629.1| putative racemase [Shigella flexneri 2a str. 301]
gi|30064181|ref|NP_838352.1| putative racemase [Shigella flexneri 2a str. 2457T]
gi|194432999|ref|ZP_03065282.1| aspartate racemase family protein [Shigella dysenteriae 1012]
gi|24053255|gb|AAN44336.1| putative resistance proteins [Shigella flexneri 2a str. 301]
gi|30042438|gb|AAP18162.1| putative resistance proteins [Shigella flexneri 2a str. 2457T]
gi|194418726|gb|EDX34812.1| aspartate racemase family protein [Shigella dysenteriae 1012]
gi|313647904|gb|EFS12350.1| aspartate racemase family protein [Shigella flexneri 2a str. 2457T]
gi|320182252|gb|EFW57155.1| Aspartate racemase [Shigella boydii ATCC 9905]
gi|332087339|gb|EGI92467.1| aspartate racemase family protein [Shigella boydii 5216-82]
gi|332088670|gb|EGI93783.1| aspartate racemase family protein [Shigella dysenteriae 155-74]
gi|332753561|gb|EGJ83941.1| aspartate racemase family protein [Shigella flexneri 4343-70]
gi|332753697|gb|EGJ84076.1| aspartate racemase family protein [Shigella flexneri K-671]
gi|332754558|gb|EGJ84924.1| aspartate racemase family protein [Shigella flexneri 2747-71]
gi|332765795|gb|EGJ96008.1| racemase [Shigella flexneri 2930-71]
gi|333000207|gb|EGK19790.1| aspartate racemase family protein [Shigella flexneri K-218]
gi|333015137|gb|EGK34480.1| aspartate racemase family protein [Shigella flexneri K-304]
Length = 230
Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 53/168 (31%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + ++ FL A +A +
Sbjct: 63 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCTLPFLHIADATGRAITGAGMTRV 120
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 121 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYYAQ 180
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 181 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLP----VFDTAAIHAEDA 224
>gi|301645191|ref|ZP_07245144.1| aspartate racemase [Escherichia coli MS 146-1]
gi|301076461|gb|EFK91267.1| aspartate racemase [Escherichia coli MS 146-1]
Length = 268
Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 53/168 (31%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + ++ FL A +A +
Sbjct: 101 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCTLPFLHIADATGRAITGAGMTRV 158
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 159 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYYAQ 218
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 219 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLP----VFDTAAIHAEDA 262
>gi|331664403|ref|ZP_08365309.1| putative resistance protein [Escherichia coli TA143]
gi|331058334|gb|EGI30315.1| putative resistance protein [Escherichia coli TA143]
Length = 230
Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 52/168 (30%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + S+ FL A +A +
Sbjct: 63 ILAEAALGLQRAGAEGIVLCTNTMHKVANAI--ESRCSLPFLHIADATGRAIIRAGMTRV 120
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 121 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRTYYAQ 180
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 181 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLP----VFDTAAIHAEDA 224
>gi|300995823|ref|ZP_07181255.1| aspartate racemase [Escherichia coli MS 200-1]
gi|300304678|gb|EFJ59198.1| aspartate racemase [Escherichia coli MS 200-1]
gi|324011691|gb|EGB80910.1| aspartate racemase [Escherichia coli MS 60-1]
Length = 265
Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 52/168 (30%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + S+ FL A A +
Sbjct: 98 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCSLPFLHIADATGCAITGAGMTRV 155
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 156 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYYAQ 215
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 216 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLP----VFDTAAIHAEDA 259
>gi|226308962|ref|YP_002768922.1| aspartate racemase [Rhodococcus erythropolis PR4]
gi|226188079|dbj|BAH36183.1| probable aspartate racemase [Rhodococcus erythropolis PR4]
Length = 243
Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/165 (14%), Positives = 51/165 (30%), Gaps = 10/165 (6%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISI--L 126
+ +L + I CNTA + S+ + + + + + + S+ L
Sbjct: 69 ARVLRESGATTLAIPCNTAHAFLPAI--SSQLGLPVVHMIDEVARHIRTLSPAVTSVGLL 126
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVS-SMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
+T T+R + Y + + L + ++ K + +
Sbjct: 127 ATTGTVRTGLYQQWLSEYSIDVLVPGPAIQDELVMPAIRAIKSGNVGDETTDKLVRAADL 186
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
V+V CT PL + +D + +AR
Sbjct: 187 -LVESGAQVVVAGCTEIPLGLP----ADATTCQIIDPATILARAL 226
>gi|307700261|ref|ZP_07637301.1| aspartate racemase [Mobiluncus mulieris FB024-16]
gi|307614472|gb|EFN93701.1| aspartate racemase [Mobiluncus mulieris FB024-16]
Length = 237
Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/167 (13%), Positives = 54/167 (32%), Gaps = 8/167 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
+M + L VI CNTA ++ + + + + + G+
Sbjct: 63 IMAADARKLQDAGAEFLVIPCNTATNFLQAVVEAVDIEV-VNIVAETVAEIGRKNAGGIK 121
Query: 124 SI--LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ ++T T+ + + + V S + +K + ++
Sbjct: 122 RVAIMATEGTIASEIYQETLQLAGYEALVPSVQLQKEISGIIYGY--VKAGQPVSRELFF 179
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
G + D ++ CT ++ + P +D+ ++AR
Sbjct: 180 GIINKLRQNEADAVICGCTELSVVYKDLQITDP---TIVDSLATLAR 223
>gi|228917407|ref|ZP_04080958.1| amino-acid racemase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|228842249|gb|EEM87346.1| amino-acid racemase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
Length = 230
Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 63/165 (38%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L +EL+ + S+ L V +A T + +++L+T
Sbjct: 73 AQKLESTGASFIAMPCNTAH-LYFEELQQSL-SIPILNIVDETLKAIPET-AKRVALLAT 129
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + + + IK E E + + +
Sbjct: 130 EATVQSGIYQDGIAKRNIEY----IHYEQWQESINKIITYIKSGEVEEAHRLWEALVLQL 185
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT ++ D++D++ +A+ +
Sbjct: 186 KDEVDTAIIACTDLNVVASE---------DFVDSAQCLAKAVVRM 221
>gi|229169488|ref|ZP_04297193.1| amino-acid racemase [Bacillus cereus AH621]
gi|228613987|gb|EEK71107.1| amino-acid racemase [Bacillus cereus AH621]
Length = 224
Score = 51.1 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 63/165 (38%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L +EL+ + +K T+ ++I++T
Sbjct: 67 AQKLESTGVDFIAMPCNTAH-LYFEELQRSITIPILNIVDETLKAIPENTK--RVAIIAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + V + + + IK E E +++ + +
Sbjct: 124 EATVQAGIYQDGIAKRNIEY----VHNEQWQEMINQIISCIKGGEIEEARKLWSVLVLQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT ++V D++D++ +A+ +
Sbjct: 180 KDEVDTAIIACTDLNVVVSE---------DFVDSAQCLAKAVVRM 215
>gi|110643008|ref|YP_670738.1| putative racemase [Escherichia coli 536]
gi|191173257|ref|ZP_03034788.1| aspartate racemase family protein [Escherichia coli F11]
gi|331684484|ref|ZP_08385076.1| putative resistance protein [Escherichia coli H299]
gi|110344600|gb|ABG70837.1| hypothetical protein YgeA (putative aspartate/glutamate racemase
[Escherichia coli 536]
gi|190906508|gb|EDV66116.1| aspartate racemase family protein [Escherichia coli F11]
gi|331078099|gb|EGI49305.1| putative resistance protein [Escherichia coli H299]
Length = 230
Score = 51.1 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 52/168 (30%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + S+ FL A A +
Sbjct: 63 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCSLPFLHIADATGCAITGAGMTRV 120
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 121 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYYAQ 180
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 181 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLP----VFDTAAIHAEDA 224
>gi|229124324|ref|ZP_04253514.1| amino-acid racemase [Bacillus cereus 95/8201]
gi|228659147|gb|EEL14797.1| amino-acid racemase [Bacillus cereus 95/8201]
Length = 224
Score = 51.1 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 63/165 (38%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L DEL+ + S+ L V +A T + +++L+T
Sbjct: 67 AQKLESTGASFIAMPCNTAH-LYFDELQQSL-SIPILNIVDETLKAIPET-AKRVALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + + + G E +E+ + +
Sbjct: 124 EATVQAGIYQDGIAKRNIEYTHYEQWQESINQIITYIKSGEV----EEARELWSALVLQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT ++ D++D++ +A+ +
Sbjct: 180 KDEVDTAIIACTDLNVVASE---------DFVDSAQCLAKAVVRM 215
>gi|319792375|ref|YP_004154015.1| aspartate racemase [Variovorax paradoxus EPS]
gi|315594838|gb|ADU35904.1| aspartate racemase [Variovorax paradoxus EPS]
Length = 251
Score = 51.1 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 51/154 (33%), Gaps = 5/154 (3%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L IACNTA L+ FP + L Q A + +++++T T
Sbjct: 84 LAALGSRAVAIACNTAHA-WHANLQERFPQVELLHMARETAQQLAAQGATEVALMATEGT 142
Query: 132 LRRTYTSNLIHSYVSQCHIHLV-SSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGK 190
R + CH+ L + + + + E E E
Sbjct: 143 YRVRLYEQALAEAGLGCHVPLADERQTIMRGIFDGVKAGNMPLAEQCFS-EVALRLAERH 201
Query: 191 RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSD 224
I++ CT PL + ++ + +D ++
Sbjct: 202 GPVSIIMGCTEVPLGLQGSAAVAG--LSLVDPAE 233
>gi|300906631|ref|ZP_07124320.1| aspartate racemase [Escherichia coli MS 84-1]
gi|300401532|gb|EFJ85070.1| aspartate racemase [Escherichia coli MS 84-1]
Length = 248
Score = 51.1 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 53/168 (31%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + ++ FL A +A +
Sbjct: 81 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCTLPFLHIADATGRAITGAGMTRV 138
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 139 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEVSRAYYAQ 198
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 199 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLP----VFDTAAIHAEDA 242
>gi|254362765|ref|ZP_04978847.1| possible aspartate racemase [Mannheimia haemolytica PHL213]
gi|153094394|gb|EDN75243.1| possible aspartate racemase [Mannheimia haemolytica PHL213]
Length = 231
Score = 51.1 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/198 (14%), Positives = 68/198 (34%), Gaps = 19/198 (9%)
Query: 46 DDVGFPYGNWEDHALKKRLMFLFS-------------DILDKYQPVLSVIACNTAFTLIK 92
D P + R ++ + + L+ +IACNTA
Sbjct: 33 DQAHIPLLISSIPDIPDRTRYILANGENPAPVMEKYIEGLESAGATCIIIACNTAH-YWF 91
Query: 93 DELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHL 152
+ L++ + L + + + +L+T ATL + +
Sbjct: 92 EHLKA-KSQVEMLSMIDCVVDEVLKCGKWRVGLLATDATLAVDLYKKQLEAQGLTFICPT 150
Query: 153 VSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQL 212
+ ++ ++ + + E +VI+L CT P+I+ +++
Sbjct: 151 ENGQKAVMDSIYLLKSGEL--EKATELMLQQRDELIRLGAEVIILGCTEVPIILA--QEI 206
Query: 213 SPWPVDWLDNSDSIARRA 230
P+ ++D++ + ++A
Sbjct: 207 EREPMRYVDSTLVLVKKA 224
>gi|229013961|ref|ZP_04171086.1| amino-acid racemase [Bacillus mycoides DSM 2048]
gi|228747334|gb|EEL97212.1| amino-acid racemase [Bacillus mycoides DSM 2048]
Length = 224
Score = 51.1 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 64/165 (38%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L +EL+ + +K T+ +++L+T
Sbjct: 67 AQKLESTGVDFIAMPCNTAH-LYFEELQRSITIPILNIVDETLKAIPENTK--RVALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + + I + + + + + IK E E +++ + +
Sbjct: 124 EATVQASIYQDGITKRDIEY----IHNEQWQEMINQIITCIKGGEIEEARKLWSLLVLQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT ++V D++D++ +A+ +
Sbjct: 180 KDEVDTAIIACTDLNVVVSE---------DFVDSAQCLAKAVVRI 215
>gi|163942483|ref|YP_001647367.1| aspartate racemase [Bacillus weihenstephanensis KBAB4]
gi|163864680|gb|ABY45739.1| aspartate racemase [Bacillus weihenstephanensis KBAB4]
Length = 224
Score = 51.1 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 64/165 (38%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L +EL+ + +K T+ +++L+T
Sbjct: 67 AQKLESTGVDFIAMPCNTAH-LYFEELQRSITIPILNIVDETLKAIPENTK--RVALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + + I + + + + + IK E E +++ + +
Sbjct: 124 EATVQASIYQDGITKRDIEY----IHNEQWQEMINQIITCIKGGEIEEARKLWSLLVLQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT ++V D++D++ +A+ +
Sbjct: 180 KDEVDTAIIACTDLNVVVSE---------DFVDSAQCLAKAVVRI 215
>gi|301302978|ref|ZP_07209105.1| aspartate racemase [Escherichia coli MS 124-1]
gi|300841642|gb|EFK69402.1| aspartate racemase [Escherichia coli MS 124-1]
gi|315256702|gb|EFU36670.1| aspartate racemase [Escherichia coli MS 85-1]
Length = 230
Score = 51.1 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 53/168 (31%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + ++ FL A +A +
Sbjct: 63 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCTLPFLHIADATGRAITGAGMTRV 120
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 121 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEVSRAYYAQ 180
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 181 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLP----VFDTAAIHAEDA 224
>gi|229019989|ref|ZP_04176779.1| amino-acid racemase [Bacillus cereus AH1273]
gi|229026224|ref|ZP_04182584.1| amino-acid racemase [Bacillus cereus AH1272]
gi|228735070|gb|EEL85705.1| amino-acid racemase [Bacillus cereus AH1272]
gi|228741310|gb|EEL91520.1| amino-acid racemase [Bacillus cereus AH1273]
Length = 224
Score = 51.1 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 66/165 (40%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L +EL+ + +K T+ +++L+T
Sbjct: 67 AQKLESTGVDFIAMPCNTAH-LYFEELQRSITIPILNIVDETLKAIPENTKK--VALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I ++ +I + + + + IK E E +++ + +
Sbjct: 124 EATVQAGIYQDGI----TKRNIEYIHNEQWQEMINQIITCIKGGEIEKARKLWSVLVLQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT +++ D++D+S +A+ +
Sbjct: 180 KDEVDTAIIACTDLNVVLSE---------DFVDSSQCLAKAVVRM 215
>gi|307264783|ref|ZP_07546345.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter wiegelii Rt8.B1]
gi|326389915|ref|ZP_08211478.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter ethanolicus JW 200]
gi|306920041|gb|EFN50253.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter wiegelii Rt8.B1]
gi|325993975|gb|EGD52404.1| Asp/Glu/hydantoin racemase [Thermoanaerobacter ethanolicus JW 200]
Length = 216
Score = 51.1 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/169 (11%), Positives = 56/169 (33%), Gaps = 10/169 (5%)
Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
L ++++ + D + + + + + + + ++ +P P +
Sbjct: 52 PDVLTQKVISIIGDFKKENIKKIMIYCNSLSAAIDLELVKQKYPD--TNIVTPLQVYHSV 109
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
++ + I + + + I + + + I + +I E I
Sbjct: 110 ASKYNRLVIWAANS-----QSLEAIEKIFYENNPLVQIIGITMLPIIRAIENFEIPEVII 164
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDS 225
+K + + D IVL CTH P + + + +D ++
Sbjct: 165 EKFSLADLVP-KNFNADGIVLGCTHLPYLKEKLAEKL--NMHIIDPAEE 210
>gi|229152950|ref|ZP_04281132.1| amino-acid racemase [Bacillus cereus m1550]
gi|228630563|gb|EEK87210.1| amino-acid racemase [Bacillus cereus m1550]
Length = 235
Score = 51.1 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/183 (16%), Positives = 68/183 (37%), Gaps = 17/183 (9%)
Query: 52 YGNWEDH-ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA 110
Y + K+ + + L+ + CNTA L +EL+ +
Sbjct: 60 YMDRPIDHETMKKAIIEGAQKLESTGVDFIAMPCNTAH-LYFEELQRSLSIPILNIVDET 118
Query: 111 IKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
+K T+ +++L+T AT++ + I + +I + + + IK
Sbjct: 119 LKTIPENTK--RVALLATEATIQAGIYQDGI----IKRNIEYIHHEKWQEMISQIITSIK 172
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
E E +E+ + + D ++ACT ++ +++D+S +A+
Sbjct: 173 SGEVEEARELWNTLVLQLKDEVDTAIIACTDLNVVASE---------NFVDSSQCLAKAV 223
Query: 231 RCL 233
+
Sbjct: 224 VRM 226
>gi|229032411|ref|ZP_04188381.1| amino-acid racemase [Bacillus cereus AH1271]
gi|228728913|gb|EEL79919.1| amino-acid racemase [Bacillus cereus AH1271]
Length = 225
Score = 50.7 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/175 (17%), Positives = 68/175 (38%), Gaps = 16/175 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L +EL S+ L V QA + +++L+T
Sbjct: 67 AQKLESTGVEFIAMPCNTAH-LYFEEL-QHSLSIPVLNIVDETLQAIPE-NTKRVALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I ++ +I + + + + IK E E +E+ + +
Sbjct: 124 EATIQAGIYQDGI----TKRNIEYIHHEKWQTMINQIITCIKGGEIEEARELWSVLVVQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTR 243
D ++ACT + ++ ++D++ +A + + ++
Sbjct: 180 KAEVDTAIIACTDLNV-------VAGED--FVDSAQCLAEAVVRMYAKNGSNPNS 225
>gi|56965360|ref|YP_177092.1| aspartate racemase [Bacillus clausii KSM-K16]
gi|56911604|dbj|BAD66131.1| aspartate racemase [Bacillus clausii KSM-K16]
Length = 226
Score = 50.7 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/178 (15%), Positives = 64/178 (35%), Gaps = 12/178 (6%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
+ + + L+K I CNTA + D+++++ IK+ +++
Sbjct: 60 EMAIINGAKRLEKTGVDFIAIPCNTAH-VYFDQVKNSLSIPLLNMVEETIKRVPEHSKK- 117
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++L+T T++ + + + +E+ G + E+ E+
Sbjct: 118 -VALLATIPTVQSGIFQEALAKEGYEFLHQDDWQTCINQIIEKIKQGQISESLELWDELY 176
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR-ARCLLPRIN 238
+ D ++ACT ++ S + +D+S +A L N
Sbjct: 177 LQLAD----TIDTAIIACTDLNVVTDK----SSGDISLVDSSTCLAEAIVHKYLSLKN 226
>gi|237732212|ref|ZP_04562693.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|226907751|gb|EEH93669.1| conserved hypothetical protein [Citrobacter sp. 30_2]
Length = 229
Score = 50.7 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/197 (19%), Positives = 59/197 (29%), Gaps = 21/197 (10%)
Query: 46 DDVGFPYGNWEDHALKKRLMFLFSD-------------ILDKYQPVLSVIACNTAFTLIK 92
D P + R L L+ VI CNTA
Sbjct: 22 DQEHIPLIISSIPDIPDRTDALMHHGHSPLPAMRDYMHKLEDAGAECIVIPCNTAH-FWF 80
Query: 93 DELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCH-IH 151
+EL+ + L V I +L+T ATL I S C
Sbjct: 81 NELKECCHT-ELLSIVETTMNEVKNCGKSRIGLLATNATLYMGLYQKGIESLGLTCISPD 139
Query: 152 LVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ 211
+ + G + + E + +IVL CT P+I+ +
Sbjct: 140 SSGQEKVMESIYCLKAGDLKRAQTLMNEQAEVLF---SRGAQIIVLGCTEVPVILADAVR 196
Query: 212 LSPWPVDWLDNSDSIAR 228
SP ++D++ S+ R
Sbjct: 197 KSPD--KYIDSTGSLVR 211
>gi|307729191|ref|YP_003906415.1| aspartate racemase [Burkholderia sp. CCGE1003]
gi|307583726|gb|ADN57124.1| aspartate racemase [Burkholderia sp. CCGE1003]
Length = 232
Score = 50.7 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 50/148 (33%), Gaps = 3/148 (2%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L++ L ++A NT + + R+ + FL A + +L
Sbjct: 67 AARQLERGGAQLVMLATNTMHRVYESIERAIH--VPFLHIADPTGSALRAAGVERVGLLG 124
Query: 128 TPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T+ +T+ + L Y + R+ + E ++ +G
Sbjct: 125 TRYTMEQTFYTGRLRERYGLDTLAPDEADRADVHRIIYDELCHGDVKRESREVYQGVIES 184
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSP 214
+ ++L CT L++ + P
Sbjct: 185 LRERGAQAVILGCTEITLLIKPEHSVLP 212
>gi|228941934|ref|ZP_04104478.1| amino-acid racemase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228974865|ref|ZP_04135427.1| amino-acid racemase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228981458|ref|ZP_04141756.1| amino-acid racemase [Bacillus thuringiensis Bt407]
gi|228778283|gb|EEM26552.1| amino-acid racemase [Bacillus thuringiensis Bt407]
gi|228784869|gb|EEM32886.1| amino-acid racemase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228817767|gb|EEM63848.1| amino-acid racemase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|326942539|gb|AEA18435.1| aspartate racemase [Bacillus thuringiensis serovar chinensis CT-43]
Length = 224
Score = 50.7 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 67/183 (36%), Gaps = 17/183 (9%)
Query: 52 YGNWEDH-ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA 110
Y + K+ + + L+ + CNTA ++ RS S+ L V
Sbjct: 49 YMDRPIDHETMKKAIIEGAQKLESTGVDFIAMPCNTAHLYFEELQRSL--SIPILNIVDE 106
Query: 111 IKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
QA + +++L+T AT++ N I + + + + IK
Sbjct: 107 TLQAIPE-NTKKVALLATEATVQAGIYQNGIAKRNIEY----IHHEKWQEMINQIITYIK 161
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
E E +E+ + + D ++ACT ++ + D++D++ +A
Sbjct: 162 SGEVEEARELWNALVLQLKDEVDTAIIACTDLNVVANE---------DFVDSAQCLAEAV 212
Query: 231 RCL 233
+
Sbjct: 213 VEM 215
>gi|332999596|gb|EGK19181.1| aspartate racemase family protein [Shigella flexneri VA-6]
Length = 230
Score = 50.7 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 53/168 (31%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + ++ FL A +A +
Sbjct: 63 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCTLPFLHIADATGRAITGAGMTRV 120
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 121 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGKFTEASRAYYAQ 180
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 181 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLP----VFDTASIHAEDA 224
>gi|196032953|ref|ZP_03100366.1| probable amino-acid racemase [Bacillus cereus W]
gi|195994382|gb|EDX58337.1| probable amino-acid racemase [Bacillus cereus W]
Length = 224
Score = 50.7 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 61/165 (36%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L +EL+ + S+ L V +A T + +++L+T
Sbjct: 67 AQKLESTGASFIAMPCNTAH-LYFEELQQSL-SIPILNIVDETLKAIPET-AKRVALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+R + I + + + G + + + +
Sbjct: 124 EATVRAEIYQDGIAKRNIDYIYYEQWQESINQIITYIKSGEVKE----AHRLWDALVLQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT ++ + D++D++ +A+ +
Sbjct: 180 KDEVDTAIIACTDLNVVANE---------DFVDSAQCLAKAVVKM 215
>gi|163734796|ref|ZP_02142234.1| aspartate racemase, probable [Roseobacter litoralis Och 149]
gi|161391901|gb|EDQ16232.1| aspartate racemase, probable [Roseobacter litoralis Och 149]
Length = 235
Score = 50.7 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 52/167 (31%), Gaps = 7/167 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L++ + CNTA RS + + + A + Q ++
Sbjct: 67 VLAEMAVRLEQAGAKALAMPCNTAHLYAPQIKRSVSIPLLHMPELACAYAARSMKQGEIV 126
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
IL++PAT +L + + D +E
Sbjct: 127 GILASPATNSTGLFKDL---CAQNGTVSIFPEEENDILAAIRRIKNAGPGDADIDLLERE 183
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ + + +++ C+ + L PV +D D +A
Sbjct: 184 AQKLQSRGATCVIIGCSEFSLASQRLA----SPVPVVDTLDVLAHAV 226
>gi|110678174|ref|YP_681181.1| aspartate racemase [Roseobacter denitrificans OCh 114]
gi|109454290|gb|ABG30495.1| aspartate racemase, probable [Roseobacter denitrificans OCh 114]
Length = 237
Score = 50.7 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/239 (15%), Positives = 75/239 (31%), Gaps = 36/239 (15%)
Query: 14 NSILIFDSGIGGLIV------LQKMRFLMPEYHFIYVADDVGFPY----GNWEDHALKKR 63
I I +GG+ V ++++ P D P ++
Sbjct: 5 RRIGI----LGGMGVEATLELMKRVHAATPAED-----DQDHVPMFVDMNPQVPSRIRHV 55
Query: 64 ----------LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
++ + L+ + + CNTA + S+ + + +
Sbjct: 56 IEKTGPDPGPVLAQMAARLELAGAQVLAMPCNTAHLYATQIEDAVGISLLNMPKLACAQA 115
Query: 114 AAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE 173
A + G++ IL++PAT N + + Q ILAS G +
Sbjct: 116 AQGMKRGGIVGILASPATNSSGLFGNFLARHEVQSAFPENEDGILASIRRIKKSGPTQTD 175
Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232
+ +E + + +++ C+ + L+ R PV LD D +
Sbjct: 176 ITL---LEREAASLVRRGAERVIIGCSEFSLVSERIRC----PVPILDTLDVLVSEIVS 227
>gi|47565179|ref|ZP_00236222.1| aspartate racemase, putative [Bacillus cereus G9241]
gi|47557965|gb|EAL16290.1| aspartate racemase, putative [Bacillus cereus G9241]
Length = 224
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 60/165 (36%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L +EL+ + ++ T+ +++L+T
Sbjct: 67 AQKLESTGVEFIAMPCNTAH-LYFEELQRSLSVPILNIVDETLQAIPENTK--RVALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + + + IK E E E+ + +
Sbjct: 124 EATVQAGIYQDGIAKRNIEY----IHHETWQEMINQIITCIKSGEIEKAHELWNTLVLQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT ++ D++D++ +A+ +
Sbjct: 180 RDEVDTAIIACTDLNVVASE---------DFVDSAQCLAKAVVKM 215
>gi|301027485|ref|ZP_07190822.1| aspartate racemase [Escherichia coli MS 69-1]
gi|300394993|gb|EFJ78531.1| aspartate racemase [Escherichia coli MS 69-1]
Length = 230
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 53/168 (31%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + S+ FL A +A +
Sbjct: 63 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCSLPFLHIADATGRAIIRAGMTRV 120
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 121 ALLGTRYTMEQVFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRTYYAQ 180
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 181 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLP----VFDTAAIHAEDA 224
>gi|229062440|ref|ZP_04199756.1| amino-acid racemase [Bacillus cereus AH603]
gi|228716911|gb|EEL68598.1| amino-acid racemase [Bacillus cereus AH603]
Length = 224
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 64/165 (38%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L +EL+ + +K T++ +++L+T
Sbjct: 67 AQKLESTGVDFIAMPCNTAH-LYFEELQRSITIPILNIVDETLKAIPENTKT--VALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + V + + + IK E E +++ + +
Sbjct: 124 EATVQAGIYQDGIAKRNIEY----VHNEQWQEMINQIISCIKGGEIEEARKLWSLLVLQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT ++V D++D++ +A+ +
Sbjct: 180 KDEVDTAIIACTDLNVVVSE---------DFVDSAQCLAKAFVRM 215
>gi|333008508|gb|EGK27978.1| aspartate racemase [Shigella flexneri K-272]
gi|333020629|gb|EGK39889.1| aspartate racemase [Shigella flexneri K-227]
Length = 239
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/196 (18%), Positives = 56/196 (28%), Gaps = 19/196 (9%)
Query: 46 DDVGFPYGNWEDHALKKRLMFLFSD-------------ILDKYQPVLSVIACNTAFTLIK 92
D P + R L L+ VI CNTA
Sbjct: 32 DQEHIPLIISSIPDIPDRTDALMHHGRSPLPVMRDYMHKLEDAGAECIVIPCNTAH-YWF 90
Query: 93 DELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHL 152
EL+ + L V I +L+T ATL I S C
Sbjct: 91 KELKDAC-HIDILSIVETTINEVRACGKTRIGLLATNATLYMGLYQKGIESLGFTCVSPD 149
Query: 153 VSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQL 212
I + K + + +++VL CT P+I+ +
Sbjct: 150 ADGQKKVMESIYSLKAGNIAHAQ--KLMNEQAEILFSRGAEILVLGCTEIPVILAQAVKE 207
Query: 213 SPWPVDWLDNSDSIAR 228
P ++D++ S+ R
Sbjct: 208 QPS--RYIDSTASLVR 221
>gi|333006274|gb|EGK25783.1| aspartate racemase [Shigella flexneri K-218]
Length = 239
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/196 (18%), Positives = 56/196 (28%), Gaps = 19/196 (9%)
Query: 46 DDVGFPYGNWEDHALKKRLMFLFSD-------------ILDKYQPVLSVIACNTAFTLIK 92
D P + R L L+ VI CNTA
Sbjct: 32 DQEHIPLIISSIPDIPDRTDALMHHGCSPLPVMRDYMHKLEDAGAECIVIPCNTAH-YWF 90
Query: 93 DELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHL 152
EL+ + L V I +L+T ATL I S C
Sbjct: 91 KELKDAC-HIDILSIVETTINEVRACGKTRIGLLATNATLYMGLYQKGIESLGFTCVSPD 149
Query: 153 VSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQL 212
I + K + + +++VL CT P+I+ +
Sbjct: 150 ADGQKKVMESIYSLKAGNIAHAQ--KLMNEQAEILFSRGAEILVLGCTEIPVILAQAVKE 207
Query: 213 SPWPVDWLDNSDSIAR 228
P ++D++ S+ R
Sbjct: 208 QPS--RYIDSTASLVR 221
>gi|306479758|emb|CBV36003.1| glutamate racemase [Helicobacter pylori]
Length = 109
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 33/108 (30%), Gaps = 8/108 (7%)
Query: 166 ACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQL------SPWPVDW 219
I E E+ + + +VI+L CTH+PLI P P
Sbjct: 2 LIEESILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMGHFALPTPPLL 61
Query: 220 LDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
+ + D+I + N F SG ++ +
Sbjct: 62 IHSGDAIVEYLQQKYALKN--NAHAFPKVEFHASGDVIWLEKQAKEWL 107
>gi|211639250|emb|CAR94649.1| hypothetical protein [Escherichia coli]
Length = 229
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/196 (18%), Positives = 55/196 (28%), Gaps = 19/196 (9%)
Query: 46 DDVGFPYGNWEDHALKKRLMFLFSD-------------ILDKYQPVLSVIACNTAFTLIK 92
D P + R L L+ VI CNTA
Sbjct: 22 DQEHIPLIISSIPDIPDRTDALMHHGRSPLPVMRDYMHKLEDAGAECIVIPCNTAH-YWF 80
Query: 93 DELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHL 152
EL+ + L V I +L+T ATL I S C
Sbjct: 81 KELKDAC-HIDILSIVETTINEVRACGKTRIGLLATNATLYMGLYQKGIESLGFTCVSPD 139
Query: 153 VSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQL 212
I + K + + +++VL CT P I+ +
Sbjct: 140 ADGQKKVMESIYSLKAGNIAHAQ--KLMNEQAEILFSRGAEILVLGCTEIPDILAQAVKE 197
Query: 213 SPWPVDWLDNSDSIAR 228
P ++D++ S+ R
Sbjct: 198 QPS--RYIDSAASLVR 211
>gi|188495564|ref|ZP_03002834.1| Asp/Glu/Hydantoin racemase [Escherichia coli 53638]
gi|188490763|gb|EDU65866.1| Asp/Glu/Hydantoin racemase [Escherichia coli 53638]
Length = 230
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 52/168 (30%), Gaps = 7/168 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + ++ FL A A +
Sbjct: 63 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCTLPFLHIADATGLAITGAGMTRV 120
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 121 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYYAQ 180
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 181 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLP----VFDTAAIHAEDA 224
>gi|30022823|ref|NP_834454.1| aspartate racemase [Bacillus cereus ATCC 14579]
gi|229130032|ref|ZP_04258996.1| amino-acid racemase [Bacillus cereus BDRD-Cer4]
gi|29898382|gb|AAP11655.1| Aspartate racemase [Bacillus cereus ATCC 14579]
gi|228653476|gb|EEL09350.1| amino-acid racemase [Bacillus cereus BDRD-Cer4]
Length = 224
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 65/165 (39%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L +EL+ + S+ L V QA T + +++L+T
Sbjct: 67 AQKLESTGASFIAMPCNTAH-LYFEELQDSL-SIPILHIVDETLQAIPET-AKRVALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + + + IK E E E+ + +
Sbjct: 124 EATVQADIYQDGIAKRNIEY----IHHETWQEMINQIITCIKSGEIEKAHELWNALVLQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+ D ++ACT ++ +++D+S +A+ +
Sbjct: 180 REEVDTAIIACTDLNVVASE---------NFVDSSQCLAKAVVRM 215
>gi|170765686|ref|ZP_02900497.1| aspartate racemase family protein [Escherichia albertii TW07627]
gi|170124832|gb|EDS93763.1| aspartate racemase family protein [Escherichia albertii TW07627]
Length = 230
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/170 (13%), Positives = 53/170 (31%), Gaps = 7/170 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + K + S+ FL A +A +
Sbjct: 63 ILAGAALGLQRAGAEGIVLCTNTMHKVAKTI--ESRCSLPFLHIADATGRAIRRAGMTRV 120
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C + +++ + + +
Sbjct: 121 ALLGTRYTMEQDFYRGRLAEQFSINCLVPAADEREKINQIIFEELCLGQFTEASRAYYAQ 180
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232
+ ++ CT L++ R + P D + A A
Sbjct: 181 VIARLAEQGAQGVIFGCTEIGLLLPEERSVLP----VFDTTAIHAEDAVS 226
>gi|15674208|ref|NP_268383.1| aspartate racemase [Lactococcus lactis subsp. lactis Il1403]
gi|281492904|ref|YP_003354884.1| aspartate racemase [Lactococcus lactis subsp. lactis KF147]
gi|12725293|gb|AAK06324.1|AE006451_5 aspartate racemase [Lactococcus lactis subsp. lactis Il1403]
gi|281376556|gb|ADA66042.1| Aspartate racemase [Lactococcus lactis subsp. lactis KF147]
gi|326407815|gb|ADZ64886.1| aspartate racemase [Lactococcus lactis subsp. lactis CV56]
Length = 240
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/176 (13%), Positives = 56/176 (31%), Gaps = 9/176 (5%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY-TQSGLISILST 128
I + P V+ CNTA DE++ A+ + + ++ +++L+T
Sbjct: 70 KIHSQLSPKFFVVPCNTAH-YYFDEMQKATEIPILHMPRIAVDSISHHFPKAKRVAVLAT 128
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYA--CGIKIKEDEIKKEIEGCFIE 186
T+ + + I +R+ + + K+ + E
Sbjct: 129 EGTILTGVYRKALEEQGYEAVIPDDQLQEKVNRLIYQEVKENRNLNFELYKEILSDVASE 188
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+V +L CT ++ + + +D R ++ + +
Sbjct: 189 M---NCEVTILGCTELSVLYEAYD--LTKEYNIIDAQAETVHRTISMMGKKDLLDD 239
>gi|300946728|ref|ZP_07160978.1| aspartate racemase [Escherichia coli MS 116-1]
gi|300976693|ref|ZP_07173549.1| aspartate racemase [Escherichia coli MS 200-1]
gi|15808704|gb|AAL08433.1|AF326777_8 unknown [Shigella flexneri 2a]
gi|300308501|gb|EFJ63021.1| aspartate racemase [Escherichia coli MS 200-1]
gi|300453611|gb|EFK17231.1| aspartate racemase [Escherichia coli MS 116-1]
Length = 229
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/196 (18%), Positives = 56/196 (28%), Gaps = 19/196 (9%)
Query: 46 DDVGFPYGNWEDHALKKRLMFLFSD-------------ILDKYQPVLSVIACNTAFTLIK 92
D P + R L L+ VI CNTA
Sbjct: 22 DQEHIPLIISSIPDIPDRTDALMHHGRSPLPVMRDYMHKLEDAGAECIVIPCNTAH-YWF 80
Query: 93 DELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHL 152
EL+ + L V I +L+T ATL I S C
Sbjct: 81 KELKDAC-HIDILSIVETTINEVRACGKTRIGLLATNATLYMGLYQKGIESLGFTCVSPD 139
Query: 153 VSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQL 212
I + K + + +++VL CT P+I+ +
Sbjct: 140 ADGQKKVMESIYSLKAGNIAHAQ--KLMNEQAEILFSRGAEILVLGCTEIPVILAQAVKE 197
Query: 213 SPWPVDWLDNSDSIAR 228
P ++D++ S+ R
Sbjct: 198 QPS--RYIDSTASLVR 211
>gi|229076262|ref|ZP_04209229.1| amino-acid racemase [Bacillus cereus Rock4-18]
gi|228706911|gb|EEL59117.1| amino-acid racemase [Bacillus cereus Rock4-18]
Length = 235
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 63/165 (38%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L +EL+ S+ L V +A T +++L+T
Sbjct: 78 AQKLESAGVDFIAMPCNTAH-LYFEELQ-HSLSIPILNIVDETLRAIPET-VKRVALLAT 134
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + + + + IK E E +++ + +
Sbjct: 135 EATVQAGIYQDGIAKRNIEY----LHNEKWQEMINQIITCIKSGEVEEARKLWSALVLQL 190
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT ++ +++D++ +A +
Sbjct: 191 KDEIDTAIIACTDLNVVASE---------NFVDSAQCLAEAVVWM 226
>gi|255994450|ref|ZP_05427585.1| aspartate racemase [Eubacterium saphenum ATCC 49989]
gi|255993163|gb|EEU03252.1| aspartate racemase [Eubacterium saphenum ATCC 49989]
Length = 249
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/187 (12%), Positives = 54/187 (28%), Gaps = 14/187 (7%)
Query: 54 NWEDHALKKRLMFLFSDILDKY------QPVLSVIACNTAFTLI---KDELRSTFPSMAF 104
+ + + + + + VI CNT+ I L+
Sbjct: 58 DRTEAIIADETDEIVYKLYRDFKFLVQSGADKIVIPCNTSHVFIKKVFAFLKGMDNITGS 117
Query: 105 LGAVPAIKQAAA-YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVE 163
+ I +G + + +T T+ + H+ L +V
Sbjct: 118 EYFLDMIDGVLKNLNGAGDVYLWATDGTVMSGVYEERLADVGVSLHLPEKLEQELVMKVI 177
Query: 164 EYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNS 223
E ++I+ + ++L CT ++ L + ++D
Sbjct: 178 YDYIKKGKTPPE--EDIKILERKVFSGDARSVILGCTELSMLKKSG--LLSDEIRYIDPI 233
Query: 224 DSIARRA 230
+ IA+ A
Sbjct: 234 EIIAKEA 240
>gi|309388341|gb|ADO76221.1| Asp/Glu/hydantoin racemase [Halanaerobium praevalens DSM 2228]
Length = 219
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/180 (13%), Positives = 62/180 (34%), Gaps = 13/180 (7%)
Query: 54 NWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
+ + + + L + +I CN+ ++ + ++ + + K
Sbjct: 53 PKKLEEI---TLEKIEN-LKIKEAEYIIIYCNSLSAVLDKKKLEKLSAIRIITPLDIYKN 108
Query: 114 AAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE 173
+ I+IL+ + + + + + + +E+ I +
Sbjct: 109 LVIDKK--RIAILAANS-QSAAKIEKMFMQKNPKLEYVSAGILPIVNYIEQRVDPATIVK 165
Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+ EI F + E + IVL CTH+P + ++ P ++ + I R+ +
Sbjct: 166 EYGLLEIISSFKKMEIAK---IVLGCTHFPYLEKEIMKIFPE---IINPAQEIVRQIKNY 219
>gi|302384307|ref|YP_003820130.1| aspartate racemase [Brevundimonas subvibrioides ATCC 15264]
gi|302194935|gb|ADL02507.1| aspartate racemase [Brevundimonas subvibrioides ATCC 15264]
Length = 223
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 49/152 (32%), Gaps = 10/152 (6%)
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
+ + CNTA + + + F+ + A A + + IL+TP
Sbjct: 71 GAQVLAMPCNTAHAQKAGIVAA---GLPFIDMIAATVAAVGGHDARAVGILATPGG--EA 125
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ + + + L A Y + E+ D I
Sbjct: 126 LYRPALEAEGIKP-VLLQGGDREAFMACVYGVKRGDTGAANRAEMARLAQALTVAGADAI 184
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
+ CT PL++ S V +D+++ +A
Sbjct: 185 IAGCTEVPLLLD----ASDVSVPLVDSAEVLA 212
>gi|229175471|ref|ZP_04302982.1| amino-acid racemase [Bacillus cereus MM3]
gi|228608003|gb|EEK65314.1| amino-acid racemase [Bacillus cereus MM3]
Length = 224
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 67/165 (40%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA ++ RS S+ L V QA T +++L+T
Sbjct: 67 AQKLESTGVSFIAMPCNTAHLYFEELQRSI--SIPILNIVDETLQAIPETAKK-VTLLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I ++ +I + + + IK E E +E+ + +
Sbjct: 124 EATIQAGIYQDGI----TKRNIEYIHHEKWQEMISQIITFIKSGEVEEARELWNALVLQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+ D +++ACT ++ D++D+S +A+ +
Sbjct: 180 REEVDTVIIACTDLNVVASE---------DFVDSSQCLAKAVVRM 215
>gi|229093861|ref|ZP_04224955.1| amino-acid racemase [Bacillus cereus Rock3-42]
gi|228689540|gb|EEL43351.1| amino-acid racemase [Bacillus cereus Rock3-42]
Length = 230
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 64/165 (38%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L +EL+ + S+ L V +A T + +++L+T
Sbjct: 73 AQKLESTGASFIAMPCNTAH-LYFEELQQSL-SIPILNIVDETLKAIPET-AKRVALLAT 129
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + + + IK E E E+ + +
Sbjct: 130 EATVQSGIYQDGIAKRNIEY----IHYEQWQESINQIISYIKGGEIEKAHELWNTLVLQL 185
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT ++ D++D+S +A+ +
Sbjct: 186 RDEVDTAIIACTDLNVVASE---------DFVDSSQCLAKAVVRM 221
>gi|228929809|ref|ZP_04092825.1| amino-acid racemase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|228829866|gb|EEM75487.1| amino-acid racemase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
Length = 224
Score = 50.0 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 63/165 (38%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L +EL+ + S+ L V +A T + +++L+T
Sbjct: 67 AQKLESTGASFIAMPCNTAH-LYFEELQQSL-SIPILNIVDETLKAIPET-AKRVALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + + + G E +E+ + +
Sbjct: 124 EATVQAGIYQDGIAKRNIEYIHYEQWQESINQIITYIKSGEV----EEARELWSALVLQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT ++ D++D++ +A+ +
Sbjct: 180 KDEVDTAIIACTDLNVVASE---------DFVDSAQCLAKAVVRM 215
>gi|301056262|ref|YP_003794473.1| aspartate racemase [Bacillus anthracis CI]
gi|300378431|gb|ADK07335.1| aspartate racemase [Bacillus cereus biovar anthracis str. CI]
Length = 224
Score = 50.0 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 63/165 (38%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L +EL+ + S+ L V +A T + +++L+T
Sbjct: 67 AQKLESTGASFIAMPCNTAH-LYFEELQQSL-SIPILNIVDETLKAIPET-AKRVALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + + + G E +E+ + +
Sbjct: 124 EATVQAGIYQDGIAKRNIEYIHYEQWQESINQIITYIKSGEV----EEARELWSALVLQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT ++ D++D++ +A+ +
Sbjct: 180 KDEVDTAIIACTDLNVVASE---------DFVDSAQCLAKAVVRM 215
>gi|227875832|ref|ZP_03993958.1| possible aspartate racemase [Mobiluncus mulieris ATCC 35243]
gi|306819113|ref|ZP_07452827.1| possible aspartate racemase [Mobiluncus mulieris ATCC 35239]
gi|227843580|gb|EEJ53763.1| possible aspartate racemase [Mobiluncus mulieris ATCC 35243]
gi|304648089|gb|EFM45400.1| possible aspartate racemase [Mobiluncus mulieris ATCC 35239]
Length = 259
Score = 50.0 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/167 (12%), Positives = 53/167 (31%), Gaps = 8/167 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
+M + L VI CNTA ++ + + + + + G+
Sbjct: 85 IMAADARKLQDAGAEFLVIPCNTATNFLQAVVEAVDIEV-VNIVTETVAEIGRKNAGGIK 143
Query: 124 SI--LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ ++T T+ + + + S + +K + ++
Sbjct: 144 RVAIMATEGTIASEIYQETLQLAGYEALVPSAQLQKEISGIIYGY--VKAGQPVSRELFF 201
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
G + D ++ CT ++ + P +D+ ++AR
Sbjct: 202 GIINKLRQNEADAVICGCTELSVVYKDLQITDP---TIVDSLATLAR 245
>gi|311106491|ref|YP_003979344.1| aspartate racemase family protein 2 [Achromobacter xylosoxidans A8]
gi|310761180|gb|ADP16629.1| aspartate racemase family protein 2 [Achromobacter xylosoxidans A8]
Length = 244
Score = 50.0 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 56/166 (33%), Gaps = 12/166 (7%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--SGLISILS 127
L L I CNTA + + + + L + A+ +G I ++
Sbjct: 74 RFLQDAGARLIAIPCNTAH--LWYDQIAASTGVPVLHIIQAVIDDLRRLGLSAGRIGLMG 131
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEY--ACGIKIKEDEIKKEIEGCFI 185
T ATL+ + + QC + R + ++ C
Sbjct: 132 TAATLKLGLYQQHLEAQGYQCIV---PDDDEVERYCMGSIRAVKANRLEDAYAPAAECIA 188
Query: 186 EKEGKRTDVIVLACTHYPLIVHV-FRQLSPWPVDWLDNSDSIARRA 230
+ + D +VL CT PL V R V D+ D++AR A
Sbjct: 189 RLKARGADAVVLGCTELPLAVPHALRPSLG--VTLTDSIDALARAA 232
>gi|228948505|ref|ZP_04110786.1| amino-acid racemase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228811185|gb|EEM57525.1| amino-acid racemase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
Length = 224
Score = 50.0 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 63/165 (38%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L +EL+ + S+ L V +A T + +++L+T
Sbjct: 67 AQKLESTGASFIAMPCNTAH-LYFEELQQSL-SIPILNIVDETLKAIPET-AKRVALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + + + G E +E+ + +
Sbjct: 124 EATVQAGIYQDGIAKRNIEYIHYEQWQESINQIITYIKSGEV----EEARELWSALVLQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT ++ D++D++ +A+ +
Sbjct: 180 KDEVDTAIIACTDLNVVASE---------DFVDSAQCLAKAVVRM 215
>gi|269977467|ref|ZP_06184439.1| aspartate racemase [Mobiluncus mulieris 28-1]
gi|269934383|gb|EEZ90945.1| aspartate racemase [Mobiluncus mulieris 28-1]
Length = 237
Score = 50.0 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/167 (12%), Positives = 53/167 (31%), Gaps = 8/167 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
+M + L VI CNTA ++ + + + + + G+
Sbjct: 63 IMAADARKLQDAGAEFLVIPCNTATNFLQAVVEAVDIEV-VNIVTETVAEIGRKNAGGIK 121
Query: 124 SI--LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ ++T T+ + + + S + +K + ++
Sbjct: 122 RVAIMATEGTIASEIYQETLQLAGYEALVPSAQLQKEISGIIYGY--VKAGQPVSRELFF 179
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
G + D ++ CT ++ + P +D+ ++AR
Sbjct: 180 GIINKLRQNEADAVICGCTELSVVYKDLQITDP---TIVDSLATLAR 223
>gi|149185927|ref|ZP_01864242.1| Aspartate racemase [Erythrobacter sp. SD-21]
gi|148830488|gb|EDL48924.1| Aspartate racemase [Erythrobacter sp. SD-21]
Length = 222
Score = 50.0 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 63/178 (35%), Gaps = 6/178 (3%)
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS 120
++ + L+ VIA NT + + S+ L A+ A A +
Sbjct: 51 IASILVESARRLEAAGAQGIVIAANTMHKVYDRV--AEGISIPVLHIADAVGVAMAEAKC 108
Query: 121 GLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEI 180
++L T + ++ + S+ + + L + + + ++ +
Sbjct: 109 ENAALLGTRFVMTESFYRQRLVSHGVDLLPPDPNDVELVDGIIYKELMLGRVTRDAERAL 168
Query: 181 EGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+ K+ + D IVLACT L+V + P D++D R A + +
Sbjct: 169 KTVITMKDKEGADAIVLACTELELVVDTDANVLP----VFDSTDIHCRAATDWIMQDG 222
>gi|154148024|ref|YP_001406048.1| aspartate racemase [Campylobacter hominis ATCC BAA-381]
gi|153804033|gb|ABS51040.1| aspartate racemase [Campylobacter hominis ATCC BAA-381]
Length = 226
Score = 50.0 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 56/166 (33%), Gaps = 12/166 (7%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-GLISILS 127
+ L + +ACNTA D L A + ++ +++LS
Sbjct: 67 AKRLKQSGCDAFCMACNTAH-FFADRLVEQSGLPILHIAKITVNAIKKEYKNVKKVAVLS 125
Query: 128 TPATLRRTYTSNLIHSYVS-QCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
T T + N + I ++ L S + + KI++ K + E
Sbjct: 126 TIGTQKAGIYDNELKKNGFLTADISQIAMKKLMSCIYDGVKAGKIEDFVPK--FKEILNE 183
Query: 187 KEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232
+ D+ + ACT PL + +D ++ +A+
Sbjct: 184 IDA---DIYIAACTEIPLFLPYI----GDDKIIIDATNELAKEIIR 222
>gi|299143380|ref|ZP_07036460.1| racemase, Asp/Glu/Hydantoin family [Peptoniphilus sp. oral taxon
386 str. F0131]
gi|298517865|gb|EFI41604.1| racemase, Asp/Glu/Hydantoin family [Peptoniphilus sp. oral taxon
386 str. F0131]
Length = 218
Score = 49.6 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/177 (13%), Positives = 55/177 (31%), Gaps = 8/177 (4%)
Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA 115
L+ + +DK L + + + + ++ + P +
Sbjct: 48 SKEELENLFIEKAKSAIDKGADKLLINCNSLSCAIDYKKIEEL---IKLEIITPLETYKS 104
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
I+I+ L +I + V +M + +E +I E
Sbjct: 105 LPKGCNNIAIIGANG-LSAYTIDKIIKESDETKNTISVGNMSIVQMIEAGFTPKEIVEGL 163
Query: 176 IKKEIEGCFIEKEGKRT--DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ + D I+L CTH+P I ++ + + +D ++ + R
Sbjct: 164 NLDGFLNYLENIKIGKYKVDSIILGCTHFPYIRDELKKRT--SLIIIDPAEKMLERI 218
>gi|229099232|ref|ZP_04230164.1| amino-acid racemase [Bacillus cereus Rock3-29]
gi|229118246|ref|ZP_04247603.1| amino-acid racemase [Bacillus cereus Rock1-3]
gi|228665218|gb|EEL20703.1| amino-acid racemase [Bacillus cereus Rock1-3]
gi|228684213|gb|EEL38159.1| amino-acid racemase [Bacillus cereus Rock3-29]
Length = 235
Score = 49.6 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 63/165 (38%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L +EL+ S+ L V +A T +++L+T
Sbjct: 78 AQKLESAGVDFIAMPCNTAH-LYFEELQ-HSLSIPILNIVDETLRAIPET-VKRVALLAT 134
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + + + + IK E E +++ + +
Sbjct: 135 EATVQAGIYQDGIAKRNIEY----LHNEKWQEMINQIITCIKSGEVEEARKLWSALVLQL 190
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT ++ D++D++ +A +
Sbjct: 191 KDEIDTAIIACTDLNVVASE---------DFVDSAQCLAEAVVWM 226
>gi|328552173|gb|AEB22665.1| aspartate racemase [Bacillus amyloliquefaciens TA208]
Length = 226
Score = 49.6 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/187 (14%), Positives = 61/187 (32%), Gaps = 22/187 (11%)
Query: 52 YGNWE------DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL 105
Y N + A+ + + L +K I CNTA + + L+
Sbjct: 49 YINKPLNHTDMEKAIIEGAVKL-----EKTGVDFIAIPCNTAH-IYFNSLKKLISVPLLN 102
Query: 106 GAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEY 165
IK+ ++ ++L+T T++ + + +E+
Sbjct: 103 MVDETIKKIPKGSKK--AALLATSPTVQSGIFQEALIRENYDFLHQDSWQTCVDQIIEKI 160
Query: 166 ACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDS 225
G + + E+ E + D ++ACT ++ + ++D+S
Sbjct: 161 KQGQINESITLFDELHRELAE----KVDTAIIACTDLNVVTDKKS----SDITFVDSSAC 212
Query: 226 IARRARC 232
+A+
Sbjct: 213 LAQAIVN 219
>gi|116696357|ref|YP_841933.1| aspartate racemase [Ralstonia eutropha H16]
gi|113530856|emb|CAJ97203.1| aspartate racemase [Ralstonia eutropha H16]
Length = 240
Score = 49.6 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 40/244 (16%), Positives = 78/244 (31%), Gaps = 33/244 (13%)
Query: 3 IDNYPCEKKLQNSILIFDSGIGGL-IV--LQKMRFLMPEYHFIYVADDVGFPYG------ 53
++N + I + G+G L V L ++ L D P
Sbjct: 1 MNNGSTGMTM---IGVL-GGMGPLATVDFLDRVVRLTDAVR-----DQDHLPMVVAHLPQ 51
Query: 54 --NWEDHALKKRLMFL-----FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLG 106
+ L + L ++L++ Q L VI CNT +L + +
Sbjct: 52 TPDRSRSILAGDALPLPYLLRGIELLNRNQVGLVVIPCNT-SHHWYAQLSAHSAAPILHI 110
Query: 107 AVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYA 166
A I AA +G ++IL+T L + + + +
Sbjct: 111 AR--ICVAALPADTGSVAILATRGALASGIYQAALDARGIAAVVPPEPVQLQVDACIRAV 168
Query: 167 CGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI 226
+ D+ + + ++ CT P+ R L+ P+ +D+++ +
Sbjct: 169 KAGAL--DQAGEALGSALARIAALGVGAAIMGCTEIPVAA---RGLAAPPLMLVDSTNEL 223
Query: 227 ARRA 230
AR
Sbjct: 224 ARAT 227
>gi|196041448|ref|ZP_03108741.1| probable amino-acid racemase [Bacillus cereus NVH0597-99]
gi|196027696|gb|EDX66310.1| probable amino-acid racemase [Bacillus cereus NVH0597-99]
Length = 224
Score = 49.6 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 65/165 (39%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L +EL+ + S+ L V +A T + +++L+T
Sbjct: 67 AQKLESTGASFIAMPCNTAH-LYFEELQQSL-SIPILNIVDETLKAIPET-AKRVALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + + + IK E E +++ + +
Sbjct: 124 EATVQSGIYQDGIAKRNIEY----IHYEQWQESINQIISYIKGGEIEKARKLWNALVLQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT ++ D++D+S +A+ +
Sbjct: 180 RDEVDTAIIACTDLNVVASE---------DFVDSSQCLAKAVVRM 215
>gi|306480141|emb|CBV36372.1| glutamate racemase [Helicobacter pylori]
Length = 105
Score = 49.6 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 31/105 (29%), Gaps = 8/105 (7%)
Query: 169 IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDN 222
I E E+ + + +V++L CTH+PLI H + +
Sbjct: 1 ENILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHS 60
Query: 223 SDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
D+I + F SG ++ +
Sbjct: 61 GDAIVEYLQQ--KYALKKNACAFPKVEFHASGDVIWLEKQAKEWL 103
>gi|170765513|ref|ZP_02900324.1| aspartate racemase [Escherichia albertii TW07627]
gi|170124659|gb|EDS93590.1| aspartate racemase [Escherichia albertii TW07627]
Length = 239
Score = 49.6 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 38/197 (19%), Positives = 59/197 (29%), Gaps = 21/197 (10%)
Query: 46 DDVGFPYGNWEDHALKKRLMFLFSD-------------ILDKYQPVLSVIACNTAFTLIK 92
D P + R L L+ VI CNTA
Sbjct: 32 DQEHIPLIISSIPNIPDRTDALMHHGRSPLPVMRDYMHKLEDAGAECIVIPCNTAH-YWF 90
Query: 93 DELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHL 152
EL+ + L V I +L+T ATL I S C
Sbjct: 91 KELKDAC-HIDILSIVETTINEVRDCGKTRIGLLATNATLYMGLYQKGIESLGLTCIRPD 149
Query: 153 VSSMILA-SRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ 211
S + G ++ E + +V+VL CT P+I+ +
Sbjct: 150 ADSQKKVMESIYSLKAGDMTHAQQLMSEQAEILF---SRGAEVLVLGCTEIPVIL--VQA 204
Query: 212 LSPWPVDWLDNSDSIAR 228
+ P ++D++ S+ R
Sbjct: 205 VKERPSHYIDSTASLVR 221
>gi|291085128|ref|ZP_06352145.2| putative aspartate racemase [Citrobacter youngae ATCC 29220]
gi|291072057|gb|EFE10166.1| putative aspartate racemase [Citrobacter youngae ATCC 29220]
Length = 229
Score = 49.6 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 40/196 (20%), Positives = 60/196 (30%), Gaps = 19/196 (9%)
Query: 46 DDVGFPYGNWEDHALKKRLMFLF-------------SDILDKYQPVLSVIACNTAFTLIK 92
D P + R L L+ VI CNTA
Sbjct: 22 DQEHIPLIISSIPDIPDRTDALMRHGNSPLPAMRDYMHKLEDAGAECIVIPCNTAH-FWF 80
Query: 93 DELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHL 152
+EL+ + + L V I +L+T ATL I S C
Sbjct: 81 NELKESCHT-ELLSIVETTLNEVKNCGKSRIGLLATNATLYMGLYQKGIESLGLTCVSPD 139
Query: 153 VSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQL 212
SS IK + + + +VIVL CT P+I+ +
Sbjct: 140 SSSQEKVMESIYCLKAGDIKRAQT--LMNEQAEALFSRGAEVIVLGCTEVPVILA--EAV 195
Query: 213 SPWPVDWLDNSDSIAR 228
P ++D++ S+ R
Sbjct: 196 KKSPAKYIDSTGSLVR 211
>gi|162404920|gb|ABX88891.1| glutamate racemase [Edwardsiella ictaluri 93-146]
Length = 74
Score = 49.6 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
Query: 205 IVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLS--GKPDIAMRR 262
+ Q+ P +D+ +IARR L+ T + + A + + A+
Sbjct: 1 LRDELAQVLPAGTRLVDSGAAIARRVAWLIANQATLPGKDMRNVA-YATQCDAQTAALLP 59
Query: 263 LMQGFGLKS 271
+++ G ++
Sbjct: 60 VLRQLGFET 68
>gi|308172351|ref|YP_003919056.1| amino acid racemase [Bacillus amyloliquefaciens DSM 7]
gi|307605215|emb|CBI41586.1| amino acid racemase [Bacillus amyloliquefaciens DSM 7]
gi|328910442|gb|AEB62038.1| amino acid racemase [Bacillus amyloliquefaciens LL3]
Length = 226
Score = 49.6 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/187 (14%), Positives = 64/187 (34%), Gaps = 22/187 (11%)
Query: 52 YGNWE------DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFL 105
Y N + A+ + + L +K I CNTA + ++L+ +
Sbjct: 49 YVNKPLNHTDMEKAIIEGAVKL-----EKTGVDFIAIPCNTAH-IYFNQLKKSISVPLLN 102
Query: 106 GAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEY 165
IK+ ++ I++L+T T++ + + +E+
Sbjct: 103 MVDETIKKIPKDSKK--IALLATSPTVQSGIFQEALIRENYDFLHQDSWQTCVDQIIEKI 160
Query: 166 ACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDS 225
G + + E+ E + D ++ACT ++ + ++D+S
Sbjct: 161 KQGQINESITLFDELHRELAE----KVDTAIIACTDLNVVTDKKS----SDIPFVDSSAC 212
Query: 226 IARRARC 232
+A+
Sbjct: 213 LAQAIVN 219
>gi|81427712|ref|YP_394710.1| aspartate racemase [Lactobacillus sakei subsp. sakei 23K]
gi|78609352|emb|CAI54398.1| Aspartate racemase [Lactobacillus sakei subsp. sakei 23K]
Length = 238
Score = 49.2 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 51/154 (33%), Gaps = 8/154 (5%)
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-GLISILSTPATLRRT 135
P VIACNTA D+L++ + +K I IL T T+
Sbjct: 81 PAFFVIACNTAH-YFYDDLQAAASAPIVHMPRETVKSIQTTYPDAKRIGILGTKGTVTDG 139
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ + + + S+ L R + + ++K E + + + D I
Sbjct: 140 IYDEALLAEGYE---VVKPSLDLQERTMDLIFNDIKGQSQMKPEKYHAILAEMQTQCDAI 196
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
+L CT L +D+ + R
Sbjct: 197 ILGCTELSLAQEW---APDHDFPVVDSQSVLVDR 227
>gi|260459913|ref|ZP_05808166.1| aspartate racemase [Mesorhizobium opportunistum WSM2075]
gi|259034124|gb|EEW35382.1| aspartate racemase [Mesorhizobium opportunistum WSM2075]
Length = 269
Score = 49.2 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/223 (13%), Positives = 61/223 (27%), Gaps = 24/223 (10%)
Query: 46 DDVGFPYGNWEDHALKKRLMFLFSDI-------------LDKYQPVLSVIACNTAFTLIK 92
D+ P L R + + L++ + CNTA
Sbjct: 37 DNDHVPAVILSVPQLPDRTEAILGNHDGPLAALIAAVSTLNELGVSCIAVPCNTAH-HWY 95
Query: 93 DELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHL 152
D+L + + + + G ++IL+T TL + + + + +
Sbjct: 96 DQLAANSQARILHIGDAVVAETRRSLDRGQVAILATRGTLVSGFYQDRMSAAGFGLCLPA 155
Query: 153 -VSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQ 211
I + I E E + D +L CT ++
Sbjct: 156 DTEFQHCVDSAISLVKAGSIADAAI--ETERALDIAQAAGADAALLGCTELSVVAASLND 213
Query: 212 LSPWPVDWLDNSDSIARRARCLL-----PRINTHQTRVFDDHA 249
+ + +D++ ++AR L H
Sbjct: 214 V--SGLVVIDSNAALARACLTRLGFGAQDARGLPTVSRLPGHE 254
>gi|82545142|ref|YP_409089.1| racemase [Shigella boydii Sb227]
gi|81246553|gb|ABB67261.1| putative resistance proteins [Shigella boydii Sb227]
gi|332091847|gb|EGI96925.1| aspartate racemase family protein [Shigella boydii 3594-74]
Length = 230
Score = 49.2 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 55/167 (32%), Gaps = 6/167 (3%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + ++ FL A +A +
Sbjct: 63 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCTLPFLHIADATGRAITGAGMTRV 120
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 121 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYYAQ 180
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP--WPVDWLDNSDSIA 227
+ ++ CT L+V R + P V + D++A
Sbjct: 181 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLPVFDTVA-IHAEDAVA 226
>gi|229105387|ref|ZP_04236032.1| amino-acid racemase [Bacillus cereus Rock3-28]
gi|228678044|gb|EEL32276.1| amino-acid racemase [Bacillus cereus Rock3-28]
Length = 258
Score = 49.2 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 61/165 (36%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA ++ RS S+ L V +A T +++L+T
Sbjct: 101 AQKLESTGVDFIAMPCNTAHLYFEELQRSL--SIPILNIVDETLRAIPET-VKRVALLAT 157
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + + + + IK E E +++ + +
Sbjct: 158 EATVQAGIYQDGIAKRNIEY----LHNEKWQEMINQIITCIKSGEVEEARKLWSALVLQL 213
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT ++ ++D+S +A +
Sbjct: 214 KDEIDTAIIACTDLNVVASEG---------FVDSSQCLAEAVVRM 249
>gi|206969422|ref|ZP_03230376.1| aspartate racemase family protein [Bacillus cereus AH1134]
gi|206735110|gb|EDZ52278.1| aspartate racemase family protein [Bacillus cereus AH1134]
Length = 224
Score = 49.2 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 68/183 (37%), Gaps = 17/183 (9%)
Query: 52 YGNWEDH-ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA 110
Y + K+ + + L+ + CNTA ++ RS S+ L V
Sbjct: 49 YIDRPIDYEAMKKAIIEGAQKLESTGASFIAMPCNTAHLYFEELQRSL--SIPILNIVDE 106
Query: 111 IKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
+A T + +++L+T AT++ + I + + + + + IK
Sbjct: 107 TLKAIPET-AKRVALLATEATVQAGIYQDGIAKRNIEY----IHYEKWQTMINQIITYIK 161
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
E E ++ + + D ++ACT ++ D++D+S +A+
Sbjct: 162 SGEVEEAHKLWNALVVQLKDEVDTAIIACTDLNVVASE---------DFVDSSQCLAKAV 212
Query: 231 RCL 233
+
Sbjct: 213 VRI 215
>gi|167647143|ref|YP_001684806.1| aspartate racemase [Caulobacter sp. K31]
gi|167349573|gb|ABZ72308.1| aspartate racemase [Caulobacter sp. K31]
Length = 220
Score = 49.2 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 59/170 (34%), Gaps = 10/170 (5%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + IACNTA D++R+ + + + AA + +
Sbjct: 59 VLAQMAVGLRDAGAQVLAIACNTAHAYA-DQVRA--SGLPLVDLIETAGLAAKADGAQRV 115
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L T L + + L + Y ++ +
Sbjct: 116 GVLGTGGALA--LYRRTFSHLGIEA-VTLDDHEQVEFMALLYRIKHGDVGPASRETMAAL 172
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
GK V+V CT PL++ S V ++D ++++ARR +
Sbjct: 173 AHRLVGKGAQVVVAGCTEVPLVMS----ASDLTVPFIDATEALARRCVEV 218
>gi|300958160|ref|ZP_07170317.1| aspartate racemase [Escherichia coli MS 175-1]
gi|300315182|gb|EFJ64966.1| aspartate racemase [Escherichia coli MS 175-1]
Length = 271
Score = 48.8 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/166 (13%), Positives = 54/166 (32%), Gaps = 4/166 (2%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + ++ FL A +A +
Sbjct: 104 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCTLPFLHIADATGRAITGAGMTRV 161
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 162 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYYAQ 221
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW-PVDWLDNSDSIA 227
+ ++ CT L+V R + P + D++A
Sbjct: 222 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLPVFETAAIHAEDAVA 267
>gi|300950579|ref|ZP_07164484.1| aspartate racemase [Escherichia coli MS 116-1]
gi|300450107|gb|EFK13727.1| aspartate racemase [Escherichia coli MS 116-1]
Length = 256
Score = 48.8 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/166 (13%), Positives = 54/166 (32%), Gaps = 4/166 (2%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + V+ NT + + + ++ FL A +A +
Sbjct: 89 ILAEAALGLQRAGAEGIVLCTNTMHKV--ADAIESRCTLPFLHIADATGRAITGAGMTRV 146
Query: 124 SILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
++L T T+ + + L + C I +++ + + +
Sbjct: 147 ALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASRAYYAQ 206
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPW-PVDWLDNSDSIA 227
+ ++ CT L+V R + P + D++A
Sbjct: 207 VIARLAEQGAQGVIFGCTEIGLLVPEERSVLPVFETAAIHAEDAVA 252
>gi|306479961|emb|CBV36198.1| glutamate racemase [Helicobacter pylori]
Length = 102
Score = 48.8 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 16/101 (15%), Positives = 30/101 (29%), Gaps = 8/101 (7%)
Query: 173 EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSI 226
E E+ + + +V++L CTH+PLI H + + D+I
Sbjct: 2 EGELLETCMRYYFTPLEILPEVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAI 61
Query: 227 ARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
+ F SG ++ +
Sbjct: 62 VEYLQQ--KYALKKNACAFPKVEFHASGDVIWLEKQAKEWL 100
>gi|264679908|ref|YP_003279817.1| aspartate racemase [Comamonas testosteroni CNB-2]
gi|262210423|gb|ACY34521.1| aspartate racemase [Comamonas testosteroni CNB-2]
Length = 242
Score = 48.8 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 18/143 (12%), Positives = 43/143 (30%), Gaps = 3/143 (2%)
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ NT + + S+ FL + A ++ +L T T+
Sbjct: 83 QAGGADCVLLCTNTMHKVADQV--AAAVSIPFLHIADPVGATARAAGVQVLGLLGTRFTM 140
Query: 133 RRTYTSNLIHS-YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + + + + + R+ D +K + +
Sbjct: 141 EQPFMRERLEQQFGLKVLVPGEAERAQVHRIIYEELCAGQISDVSRKLYQRAIESLAARG 200
Query: 192 TDVIVLACTHYPLIVHVFRQLSP 214
+VL CT L++ + P
Sbjct: 201 AQAVVLGCTEIGLLIKSEDSVLP 223
>gi|222098225|ref|YP_002532282.1| aspartate racemase family protein [Bacillus cereus Q1]
gi|221242283|gb|ACM14993.1| aspartate racemase family protein [Bacillus cereus Q1]
Length = 224
Score = 48.8 bits (115), Expect = 9e-04, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 61/165 (36%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L +EL+ + ++ + +++L+T
Sbjct: 67 TQKLESTGVDFIAMPCNTAH-LYFEELQQSLSIPILNIVDETLQTIPKNVK--RVALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I ++ I + + + IK E E E+ + +
Sbjct: 124 EATVQAGIYQDGI----TKRDIQYIHHEKWQEMINQIITWIKSGELEEAHELWNALVLQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT ++ D++D+S +A+ +
Sbjct: 180 RDEVDTAIIACTDLNVVASE---------DFVDSSQCLAKAVVRM 215
>gi|184154717|ref|YP_001843057.1| aspartate racemase [Lactobacillus fermentum IFO 3956]
gi|260663254|ref|ZP_05864146.1| aspartate racemase [Lactobacillus fermentum 28-3-CHN]
gi|183226061|dbj|BAG26577.1| aspartate racemase [Lactobacillus fermentum IFO 3956]
gi|260552446|gb|EEX25497.1| aspartate racemase [Lactobacillus fermentum 28-3-CHN]
Length = 237
Score = 48.8 bits (115), Expect = 9e-04, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 54/166 (32%), Gaps = 8/166 (4%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-GLISILST 128
QP V+ CNTA KD L++ +K+ + +L+T
Sbjct: 70 KQQSLLQPEFFVLICNTAHYFFKD-LQAATEIPILNMLEETVKEIKKIKPDAKKVGLLAT 128
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
P T+ + I + + + + + D K E E
Sbjct: 129 PGTVESGIYDHYIQAAGYEELKPTQEILDATEDLIYHDIKEAGHSDGAKYH-ELVRKMVE 187
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWL-DNSDSIARRARCL 233
+ DV++L CT +L+P + D+ IA R L
Sbjct: 188 EQGADVVILGCTELSYA----EELNPETTYPVADSQSIIADRTLEL 229
>gi|229163751|ref|ZP_04291696.1| amino-acid racemase [Bacillus cereus R309803]
gi|228619718|gb|EEK76599.1| amino-acid racemase [Bacillus cereus R309803]
Length = 224
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 60/165 (36%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA ++ RS S+ L V QA + +++L+T
Sbjct: 67 AQKLESTGVEFIAMPCNTAHLYFEELQRSL--SIPILNIVDETLQAIPE-NTKRVALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + H ++ + G E +++ + +
Sbjct: 124 EATVQAGIYQDGIAKRNIEYIHHEKWQTMINQIIIYIKSGEV----EEARKLWSTLVLQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT ++ + D++D+ +A +
Sbjct: 180 KDEVDTAIIACTDLNVVANE---------DFVDSGQCLAEAVVRM 215
>gi|227513984|ref|ZP_03944033.1| aspartate racemase [Lactobacillus fermentum ATCC 14931]
gi|227087628|gb|EEI22940.1| aspartate racemase [Lactobacillus fermentum ATCC 14931]
Length = 241
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 54/166 (32%), Gaps = 8/166 (4%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-GLISILST 128
QP V+ CNTA KD L++ +K+ + +L+T
Sbjct: 74 KQQSLLQPEFFVLICNTAHYFFKD-LQAATEIPILNMLEETVKEIKKIKPDAKKVGLLAT 132
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
P T+ + I + + + + + D K E E
Sbjct: 133 PGTVESGIYDHYIQAAGYEELKPTQEILDATEDLIYHDIKEAGHSDGAKYH-ELVRKMVE 191
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWL-DNSDSIARRARCL 233
+ DV++L CT +L+P + D+ IA R L
Sbjct: 192 EQGADVVILGCTELSYA----EELNPETTYPVADSQSIIADRTLEL 233
>gi|118479884|ref|YP_897035.1| aspartate racemase [Bacillus thuringiensis str. Al Hakam]
gi|118419109|gb|ABK87528.1| aspartate racemase [Bacillus thuringiensis str. Al Hakam]
Length = 224
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 60/165 (36%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L EL+ + ++ T+ +++L+T
Sbjct: 67 AQKLESTGASFIAMPCNTAH-LYFKELQQSISIPILNIVDETLQVIPENTK--RVALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + + + IK E E +E+ + +
Sbjct: 124 EATVQAGIYQDGIAKRNIEY----IHHEKWQESINQIISCIKGGEIEKARELWNALVLQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT ++ +++D+S +A+ +
Sbjct: 180 KDEVDTAIIACTDLNVVASE---------NFVDSSQCLAKAVVRM 215
>gi|225866744|ref|YP_002752122.1| aspartate racemase family protein [Bacillus cereus 03BB102]
gi|225790790|gb|ACO31007.1| aspartate racemase family protein [Bacillus cereus 03BB102]
Length = 224
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 60/165 (36%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L EL+ + ++ T+ +++L+T
Sbjct: 67 AQKLESTGASFIAMPCNTAH-LYFKELQQSISIPILNIVDETLQVIPENTK--RVALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + + + IK E E +E+ + +
Sbjct: 124 EATVQAGIYQDGIAKRNIEY----IHHEKWQESINQIISCIKGGEIEKARELWNALVLQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT ++ D++D++ +A+ +
Sbjct: 180 KDEVDTAIIACTDLNVVASE---------DFVDSAQCLAKAVVKM 215
>gi|197251317|ref|YP_002149466.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197215020|gb|ACH52417.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
Length = 244
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 61/188 (32%), Gaps = 7/188 (3%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R + + +L+ VI CNTA D+L++ + + + A + +
Sbjct: 62 RYLERYLHMLEDAGAECIVIPCNTAH-YWFDDLQNVAKA-RMISILDATLGDIPPS-ARH 118
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +L+T ATL + + L + + + +
Sbjct: 119 VGLLATNATLATGLYQKKALARGLTLIQPEDAGQALVMQAIYTLKRG--DKTAAQALLLP 176
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ I++ CT PLIV + +D++ S+ R A +
Sbjct: 177 QIDSLIARGAQTIIMGCTEIPLIVAGHERAI--ACPMIDSTASLVRAAIRWYESWPDTRA 234
Query: 243 RVFDDHAL 250
+ + L
Sbjct: 235 SLTGEQRL 242
>gi|257869226|ref|ZP_05648879.1| aspartate racemase [Enterococcus gallinarum EG2]
gi|257803390|gb|EEV32212.1| aspartate racemase [Enterococcus gallinarum EG2]
Length = 234
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 30/166 (18%), Positives = 53/166 (31%), Gaps = 10/166 (6%)
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
QP V+ CNTA D+L+ P A K +G ++ L T +++
Sbjct: 76 QPNFIVLTCNTAH-YFFDQLQEATPIPLLHMPREAAKSLQKEGVTGKVAFLGTEGSIKAG 134
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE-GCFIEKEGK-RTD 193
+ + + + L +V + D + +++ E K +
Sbjct: 135 IYEAELRACGFDVY---LPEPQLQQKVNTLIYDRIKESDTLDQDLYFEILEEVTHKIGCE 191
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA-RCLLPRIN 238
VL CT L+ P +D + R L N
Sbjct: 192 KSVLGCTELSLMEEFTEN---NPYPVVDAQSILVDRTIEKALTYRN 234
>gi|312143810|ref|YP_003995256.1| Asp/Glu/hydantoin racemase [Halanaerobium sp. 'sapolanicus']
gi|311904461|gb|ADQ14902.1| Asp/Glu/hydantoin racemase [Halanaerobium sp. 'sapolanicus']
Length = 220
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 27/168 (16%), Positives = 57/168 (33%), Gaps = 8/168 (4%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L K + +I CN+ +++ + S + L + A+ + + ++IL+
Sbjct: 61 RHLKKAGANIIIIYCNSLSAVLEVDKISALTDIPILTPL-AVYKNLDLSSLDKLAILAAN 119
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
+ N+I M + + +E E + ++ +
Sbjct: 120 S-QSAAKIENIIAEKNPHLEFVSAGIMPIINAIE---AQKDPTEILAEAGLQELLVAFRT 175
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237
D ++L CTH P + + +D +D I A LL
Sbjct: 176 MGADTLLLGCTHLPYLKEEIKGFYEN---IIDPADKIKVMAEKLLAHK 220
>gi|197264432|ref|ZP_03164506.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197242687|gb|EDY25307.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
Length = 244
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 60/188 (31%), Gaps = 7/188 (3%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R + + +L+ VI CNTA D+L++ + + + A + +
Sbjct: 62 RYLERYLHMLEDAGAECIVIPCNTAH-YWFDDLQNVAKA-RMISILDATLGDIPPS-ARH 118
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +L+T ATL + L + + + +
Sbjct: 119 VGLLATNATLATGLYQKKALERGLTLIQPEEAGQALVMQAIYTLKRG--DKTAAQALLLP 176
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ I++ CT PLIV + +D++ S+ R A +
Sbjct: 177 QIDSLIARGAQAIIMGCTEIPLIVAGHERAI--ACPMIDSTASLVRAAIRWYESWPDTRA 234
Query: 243 RVFDDHAL 250
+ + L
Sbjct: 235 SLTGEQRL 242
>gi|298529163|ref|ZP_07016566.1| aspartate racemase [Desulfonatronospira thiodismutans ASO3-1]
gi|298510599|gb|EFI34502.1| aspartate racemase [Desulfonatronospira thiodismutans ASO3-1]
Length = 248
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 27/183 (14%), Positives = 53/183 (28%), Gaps = 6/183 (3%)
Query: 65 MFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS--GL 122
+ + L+ + + CNT+ +D S+ L + Q Q
Sbjct: 70 LQDMARCLEAWGADFLAMPCNTSHYYFQDI--QGAVSIPMLNLIEITVQEVLRQQPGIDK 127
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ IL + A + + + + + + + D E
Sbjct: 128 VGILGSTALILTGLYQQAFAASGVRVVYPETACQDRVMVLIKDIKKGAM--DLAFPVFES 185
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
E + +V+ACT L+ + P+ D+SD +AR N
Sbjct: 186 SVSSLETQGAQALVIACTELSLLPDASLSSAHQPLPRYDSSDILARDIIRTCKVKNLKSI 245
Query: 243 RVF 245
Sbjct: 246 GPP 248
>gi|225572984|ref|ZP_03781739.1| hypothetical protein RUMHYD_01175 [Blautia hydrogenotrophica DSM
10507]
gi|225039635|gb|EEG49881.1| hypothetical protein RUMHYD_01175 [Blautia hydrogenotrophica DSM
10507]
Length = 214
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 54/169 (31%), Gaps = 14/169 (8%)
Query: 59 ALK-KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
++ R+ L + + + + T+ + L + P + A
Sbjct: 48 EVRTNRIQRLIQSAQSDGMNAMMIYCNSLSSTVDMEML---SRKLGIKIVTPLMAYACYA 104
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
Q ++S+L+ I C + S + + +E +I E K
Sbjct: 105 KQYQVLSVLAGN-NQGLAGIERAILQSNLSCTVVGASLLPMVVEIEAQTLPEQIVE---K 160
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD--WLDNSD 224
+ F E + +L CTH+ R++ V LD +D
Sbjct: 161 FHLMSLFEFFESAGAEAFILGCTHF----PYIRRVLDEKVRIPILDPAD 205
>gi|207093195|ref|ZP_03240982.1| glutamate racemase [Helicobacter pylori HPKX_438_AG0C1]
Length = 105
Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 30/105 (28%), Gaps = 8/105 (7%)
Query: 169 IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDN 222
I E E+ + + +VI+L CTH+PLI + +
Sbjct: 1 ESILEGELLETCMRYYFTPLKILPEVIILGCTHFPLIAQKIEGYFMGHFALSTPPLLIHS 60
Query: 223 SDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
D+I + F SG ++ +
Sbjct: 61 GDAIVEYLQQ--KYALKKNACAFPKVEFHASGDVVWLEKQAKEWL 103
>gi|300119117|ref|ZP_07056822.1| aspartate racemase [Bacillus cereus SJ1]
gi|298723511|gb|EFI64248.1| aspartate racemase [Bacillus cereus SJ1]
Length = 223
Score = 48.0 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 61/165 (36%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ I CNTA L +EL+ + S+ L V +A T + +++L+T
Sbjct: 67 AQKLESTGASFIAIPCNTAH-LYFEELQQSL-SIPILNIVDETLKAIPET-AKRVALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT+R + I + + + G + + + +
Sbjct: 124 EATVRAEIYQDGIAKRNIDYIHYEQWQESINQIITYIKSGEVKE----AHRLWDALVLQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT ++ + D++D+S +A+ +
Sbjct: 180 KNEVDTAIIACTDLNVVANE---------DFVDSSQCLAKAVVRM 215
>gi|228961020|ref|ZP_04122648.1| amino-acid racemase [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|228798653|gb|EEM45638.1| amino-acid racemase [Bacillus thuringiensis serovar pakistani str.
T13001]
Length = 224
Score = 48.0 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 63/165 (38%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA ++ RS S+ L V QA + +++L+T
Sbjct: 67 AQKLESTGVSFIAMPCNTAHLYFEELQRSL--SIPILNIVDETLQAIPE-NTKRVALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + + + + IK E E +++ + +
Sbjct: 124 EATVQAGIYQDGIAKRNIEY----IHYEKWQTMINQIITYIKSGEVEKARKLWSALVGQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT ++ +++D+S +A+ +
Sbjct: 180 KDEVDTAIIACTDLNVVASE---------NFVDSSQCLAKAVVRM 215
>gi|325570019|ref|ZP_08145944.1| aspartate racemase [Enterococcus casseliflavus ATCC 12755]
gi|325156847|gb|EGC69018.1| aspartate racemase [Enterococcus casseliflavus ATCC 12755]
Length = 236
Score = 48.0 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 52/155 (33%), Gaps = 7/155 (4%)
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
P V+ CNTA DEL++ A K +G ++ L T +++
Sbjct: 77 PNFIVLTCNTAH-YFFDELQAATEIEILHMPREAAKVVFEKGVTGKVAFLGTEGSVKAGI 135
Query: 137 TSNLIHSYVSQCHIHLVSSMILAS-RVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ ++ + + + + + E+ EI E+ + +
Sbjct: 136 YEKELRQLGLDVYLPEPAIQKKVNTLIYDRIKENDHLDQELYFEILEEVTERI--GCESV 193
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
VL CT L+ ++ P +D + R
Sbjct: 194 VLGCTELSLMDEF---VTDNPYPVVDAQSILVDRT 225
>gi|229135597|ref|ZP_04264377.1| amino-acid racemase [Bacillus cereus BDRD-ST196]
gi|228647870|gb|EEL03925.1| amino-acid racemase [Bacillus cereus BDRD-ST196]
Length = 217
Score = 48.0 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 64/165 (38%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L +EL+ + +K T+ +++L+T
Sbjct: 60 AQKLESTGVDFIAMPCNTAH-LYFEELQRSITIPILNIVDETLKAIPENTK--RVALLAT 116
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + + I + + + + + IK E E +++ + +
Sbjct: 117 EATVQASIYQDGITKRDIEY----IHNEQWQEMINQIITCIKGGEIEEARKLWSLLVLQL 172
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT ++V D++D++ +A+ +
Sbjct: 173 KDEIDTAIIACTDLNVVVSE---------DFVDSAQCLAKAGVRI 208
>gi|213648841|ref|ZP_03378894.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. J185]
Length = 226
Score = 48.0 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 58/172 (33%), Gaps = 7/172 (4%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R + + +L+ VI CNTA D+L++ + + + A + +
Sbjct: 62 RYLERYLHMLEDAGAECIVIPCNTAH-YWFDDLQNVAKA-RMISILDATLGDIPPS-ARH 118
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +L+T ATL + + L + + + +
Sbjct: 119 VGLLATNATLATGLYQKKALARGLTLIQPEDAGQALVMQAIYTLKRG--DKTAAQALLLP 176
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ I++ CT PLIV + +D++ S+ R A L
Sbjct: 177 QIDSLIARGAQAIIMGCTEIPLIVAGHERAI--ACPMIDSTASLVRAAIRWL 226
>gi|213052215|ref|ZP_03345093.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E00-7866]
Length = 246
Score = 48.0 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 41/260 (15%), Positives = 79/260 (30%), Gaps = 35/260 (13%)
Query: 10 KKLQNSILIFDSGIGGL----IV--LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKR 63
K ++++I I +GG+ L+K L D P + R
Sbjct: 1 KAMKHTIGI----LGGMGPAATADMLEKFVELR-HVSC----DQQHIPLIVSSIPDIPDR 51
Query: 64 LMFLFS-------------DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA 110
L S +L+ VI CNTA D+L++ + + + A
Sbjct: 52 TACLLSGGPSPYRYLERYLHMLEDAGAECIVIPCNTAH-YWFDDLQNVAKA-RMISILDA 109
Query: 111 IKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
+ + + +L+T ATL + + L +
Sbjct: 110 TLGDIPPS-ARHVGLLATNATLATGLYQKKALARGLTLIQPEDAGQALVMQAIYTLKRG- 167
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ + + + I++ CT PLIV + +D++ S+ R A
Sbjct: 168 -DKTAAQALLLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAI--ACPMIDSTASLVRAA 224
Query: 231 RCLLPRINTHQTRVFDDHAL 250
+ + + L
Sbjct: 225 IRWYESWPDTRASLTGEQRL 244
>gi|62182935|ref|YP_219352.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|161617810|ref|YP_001591776.1| hypothetical protein SPAB_05674 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|168464587|ref|ZP_02698490.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|194442279|ref|YP_002043753.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|198244578|ref|YP_002218382.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|200389289|ref|ZP_03215901.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|224586336|ref|YP_002640135.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|62130568|gb|AAX68271.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|161367174|gb|ABX70942.1| hypothetical protein SPAB_05674 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194400942|gb|ACF61164.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|195632992|gb|EDX51446.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|197939094|gb|ACH76427.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|199606387|gb|EDZ04932.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|224470864|gb|ACN48694.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|322717439|gb|EFZ09010.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
gi|326626189|gb|EGE32534.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
Length = 244
Score = 48.0 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 61/188 (32%), Gaps = 7/188 (3%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R + + +L+ VI CNTA D+L++ + + + A + +
Sbjct: 62 RYLERYLHMLEDAGAECIVIPCNTAH-YWFDDLQNVAKA-RMISILDATLGDIPPS-ARH 118
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +L+T ATL + + L + + + +
Sbjct: 119 VGLLATNATLATGLYQKKALARGLTLIQPEEAGQALVMQAIYTLKRG--DKTAAQALLLP 176
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ I++ CT PLIV + +D++ S+ R A +
Sbjct: 177 QIDSLIARGAQAIIMGCTEIPLIVAGHERAI--ACPMIDSTASLVRAAIRWYESWPDTRA 234
Query: 243 RVFDDHAL 250
+ + L
Sbjct: 235 SLTGEQRL 242
>gi|306480020|emb|CBV36255.1| glutamate racemase [Helicobacter pylori]
Length = 95
Score = 48.0 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 13/94 (13%), Positives = 26/94 (27%), Gaps = 8/94 (8%)
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCL 233
+ +V++L CTH+PLI + + D+I + +
Sbjct: 2 CMRYYFTPLEILPEVVILGCTHFPLIAQKIESYFMEHFALSTPPLLIHSGDAIVKYLQQ- 60
Query: 234 LPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
F SG ++ +
Sbjct: 61 -KYALKKNACAFPKVEFHASGDVVWLEKQAKEWL 93
>gi|196044013|ref|ZP_03111250.1| probable amino-acid racemase [Bacillus cereus 03BB108]
gi|229187012|ref|ZP_04314163.1| amino-acid racemase [Bacillus cereus BGSC 6E1]
gi|196025349|gb|EDX64019.1| probable amino-acid racemase [Bacillus cereus 03BB108]
gi|228596464|gb|EEK54133.1| amino-acid racemase [Bacillus cereus BGSC 6E1]
Length = 224
Score = 48.0 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 60/165 (36%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L EL+ + ++ T+ +++L+T
Sbjct: 67 AQKLESTGASFIAMPCNTAH-LYFKELQQSISIPILNIVDETLQVIPENTK--RVALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + + + IK E E +E+ + +
Sbjct: 124 EATVQAGIYQDGIAKRNIEY----IHHEKWQESINQIISCIKGGEIEKARELWNALVLQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT ++ D++D+S +A+ +
Sbjct: 180 KDEVDTAIIACTDLNVVASE---------DFVDSSQCLAKAVVRM 215
>gi|205355237|ref|YP_002229038.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|205275018|emb|CAR40102.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|326630400|gb|EGE36743.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 240
Score = 48.0 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 61/188 (32%), Gaps = 7/188 (3%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R + + +L+ VI CNTA D+L++ + + + A + +
Sbjct: 58 RYLERYLHMLEDAGAECIVIPCNTAH-YWFDDLQNVAKA-RMISILDATLGDIPPS-ARH 114
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +L+T ATL + + L + + + +
Sbjct: 115 VGLLATNATLATGLYQKKALARGLTLIQPEEAGQALVMQAIYTLKRG--DKTVAQALLLP 172
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ I++ CT PLIV + +D++ S+ R A +
Sbjct: 173 QIDSLIARGAQAIIMGCTEIPLIVAGHERAI--ACPMIDSTASLVRAAIRWYESWPDTRA 230
Query: 243 RVFDDHAL 250
+ + L
Sbjct: 231 SLTGEQRL 238
>gi|217962242|ref|YP_002340812.1| probable amino-acid racemase [Bacillus cereus AH187]
gi|229141490|ref|ZP_04270026.1| amino-acid racemase [Bacillus cereus BDRD-ST26]
gi|217067288|gb|ACJ81538.1| probable amino-acid racemase [Bacillus cereus AH187]
gi|228641975|gb|EEK98270.1| amino-acid racemase [Bacillus cereus BDRD-ST26]
Length = 224
Score = 48.0 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 65/165 (39%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L +EL+ + S+ L V +A T + +++L+T
Sbjct: 67 AQKLESTGASFIAMPCNTAH-LYFEELQQSL-SIPILNIVDETLKAIPET-AKRVALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + + + IK + E +E+ + +
Sbjct: 124 EATVQAGIYQDGIAKRNIEY----IHHEKWQDMINQIITYIKSGKVEEARELWNALVLQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+ D ++ACT ++ ++D+S +A+ +
Sbjct: 180 REEVDTAIIACTDLNVVA--IED-------FVDSSQCLAKAVVRM 215
>gi|229072257|ref|ZP_04205463.1| amino-acid racemase [Bacillus cereus F65185]
gi|229082009|ref|ZP_04214498.1| amino-acid racemase [Bacillus cereus Rock4-2]
gi|228701308|gb|EEL53805.1| amino-acid racemase [Bacillus cereus Rock4-2]
gi|228710865|gb|EEL62834.1| amino-acid racemase [Bacillus cereus F65185]
Length = 224
Score = 48.0 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 64/165 (38%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L +EL S+ L V QA T + +++L+T
Sbjct: 67 AQKLESTGASFIAMPCNTAH-LYFEEL-QHSLSIPILNIVDETLQAIPET-TKRVALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + + + + IK E E +++ + +
Sbjct: 124 EATVQAGIYQDGIAKRNIEY----IHYEKWQTMINQIITYIKSGEVEEARKLWNALVVQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT ++ D++D+S +A+ +
Sbjct: 180 KDEVDTAIIACTDLNVVASE---------DFVDSSQCLAKAVVRM 215
>gi|229198914|ref|ZP_04325604.1| amino-acid racemase [Bacillus cereus m1293]
gi|228584551|gb|EEK42679.1| amino-acid racemase [Bacillus cereus m1293]
Length = 224
Score = 48.0 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 65/165 (39%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L +EL+ + S+ L V +A T + +++L+T
Sbjct: 67 AQKLESTGASFIAMPCNTAH-LYFEELQQSL-SIPILNIVDETLKAIPET-AKRVALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + + + IK + E +E+ + +
Sbjct: 124 EATVQAGIYQDGIAKRNIEY----IHHEKWQDMINQIITYIKSGKVEEARELWNALVLQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+ D ++ACT ++ ++D+S +A+ +
Sbjct: 180 REEVDTAIIACTDLNVVA--IED-------FVDSSQCLAKAVVRM 215
>gi|299529910|ref|ZP_07043338.1| aspartate racemase [Comamonas testosteroni S44]
gi|298722082|gb|EFI63011.1| aspartate racemase [Comamonas testosteroni S44]
Length = 265
Score = 48.0 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 19/143 (13%), Positives = 44/143 (30%), Gaps = 3/143 (2%)
Query: 73 DKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATL 132
++ NT + + S+ FL + AA ++ +L T T+
Sbjct: 106 QAGGADCVLLCTNTMHKVADRV--AAAVSIPFLHIADPVGAAARAAGVQVLGLLGTRFTM 163
Query: 133 RRTYTSNLIHS-YVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
+ + + + + + + R+ D +K + +
Sbjct: 164 EQPFMRERLEQQFGLKVLVPGEAERAQVHRIIYEELCAGQISDVSRKLYQRAIESLAARG 223
Query: 192 TDVIVLACTHYPLIVHVFRQLSP 214
+VL CT L++ + P
Sbjct: 224 AQAVVLGCTEIGLLIKSEDSVLP 246
>gi|332978050|gb|EGK14788.1| glutamate racemase [Desmospora sp. 8437]
Length = 72
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 7/52 (13%), Positives = 17/52 (32%), Gaps = 3/52 (5%)
Query: 219 WLDNSDSIARRARCLLPRINTHQTRVF---DDHALFLSGKPDIAMRRLMQGF 267
+ +++ R +L + ++H F SG+P +
Sbjct: 1 LISSAEETTRELIAILRGDGLLREGPPCGPEEHLFFTSGRPSSFRDIAERWL 52
>gi|206977308|ref|ZP_03238205.1| probable amino-acid racemase [Bacillus cereus H3081.97]
gi|206744459|gb|EDZ55869.1| probable amino-acid racemase [Bacillus cereus H3081.97]
Length = 224
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 65/165 (39%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L +EL+ + S+ L V QA T + +++L+T
Sbjct: 67 AQKLESTGASFIAMPCNTAH-LYFEELQQSL-SIPILNIVDETLQAIPET-AKRVALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + + + IK + E +E+ + +
Sbjct: 124 EATVQAGIYQDGIAKRNIEY----IHHEKWQDMINQIITYIKSGKVEEARELWNALVLQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+ D ++ACT ++ ++D+S +A+ +
Sbjct: 180 REEVDTAIIACTDLNVVA--IED-------FVDSSQCLAKAVVRM 215
>gi|257865939|ref|ZP_05645592.1| aspartate racemase [Enterococcus casseliflavus EC30]
gi|257872272|ref|ZP_05651925.1| aspartate racemase [Enterococcus casseliflavus EC10]
gi|257875566|ref|ZP_05655219.1| aspartate racemase [Enterococcus casseliflavus EC20]
gi|257799873|gb|EEV28925.1| aspartate racemase [Enterococcus casseliflavus EC30]
gi|257806436|gb|EEV35258.1| aspartate racemase [Enterococcus casseliflavus EC10]
gi|257809732|gb|EEV38552.1| aspartate racemase [Enterococcus casseliflavus EC20]
Length = 236
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 53/155 (34%), Gaps = 7/155 (4%)
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
P V+ CNTA DEL++ A K +G ++ L T +++
Sbjct: 77 PNFIVLTCNTAH-YFFDELQAATEIEILHMPREAAKVVFEKGVTGKVAFLGTEGSVKAGI 135
Query: 137 TSNLIHSYVSQCHIHLVSSMILAS-RVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ + ++ + + + + + E+ EI E+ + +
Sbjct: 136 YEKELRKFGLDVYLPEPTIQKKVNTLIYDRIKENDHLDQELYFEILEEVTERI--GCESV 193
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
VL CT L+ ++ P +D + R
Sbjct: 194 VLGCTELSLMDEF---VTDNPYPVVDAQSILVDRT 225
>gi|48477221|ref|YP_022927.1| aspartate racemase [Picrophilus torridus DSM 9790]
gi|48429869|gb|AAT42734.1| aspartate racemase [Picrophilus torridus DSM 9790]
Length = 232
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 56/167 (33%), Gaps = 14/167 (8%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
+ L+ +ACNTA + FL + + +
Sbjct: 63 AINNGIKYLESIGIDTIGMACNTAHI----WFKEFVYKSNFLNMIDLTASVLKKSGFKNV 118
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+LST AT+ + + Y I V + +K+ + ++ +E
Sbjct: 119 LLLSTNATVSSGIYTGKLRDYNINTVIPDQ------DIVMKSIHYVKVNDTKMARETIEP 172
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
I D ++LACT P+I+ + +D+ +++A
Sbjct: 173 VINGHRNEVDALLLACTEMPVIISEKTY----NIPVIDSDEALAAAL 215
>gi|207859637|ref|YP_002246288.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|206711440|emb|CAR35824.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
Length = 244
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 61/188 (32%), Gaps = 7/188 (3%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R + + +L+ VI CNTA D+L++ + + + A + +
Sbjct: 62 RYLERYLHMLEDAGAECIVIPCNTAH-YWFDDLQNVAKA-RMISILDATLGDIPPS-ARH 118
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +L+T ATL + + L + + + +
Sbjct: 119 VGLLATNATLATGLYQKKALARGLTLIQPEEAGQALVMQAIYTLKRG--DKTVAQALLLP 176
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ I++ CT PLIV + +D++ S+ R A +
Sbjct: 177 QIDSLIARGAQAIIMGCTEIPLIVAGHERAI--ACPMIDSTASLVRAAIRWYESWPDTRA 234
Query: 243 RVFDDHAL 250
+ + L
Sbjct: 235 SLTGEQRL 242
>gi|168262443|ref|ZP_02684416.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|205348837|gb|EDZ35468.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
Length = 244
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 61/188 (32%), Gaps = 7/188 (3%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R + + +L+ VI CNTA D+L++ + + + A + +
Sbjct: 62 RYLERYLHMLEDAGAECIVIPCNTAH-YWFDDLQNVAKA-RMISILDATLGDIPPS-ARY 118
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +L+T ATL + + L + + + +
Sbjct: 119 VGLLATNATLATGLYQKKALARGLTLIQPEEAGQALVMQAIYTLKRG--DKTAAQALLLP 176
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ I++ CT PLIV + +D++ S+ R A +
Sbjct: 177 QIDSLIARGAQAIIMGCTEIPLIVAGHERAI--ACPMIDSTASLVRAAIRWYESWPDTRA 234
Query: 243 RVFDDHAL 250
+ + L
Sbjct: 235 SLTGEQRL 242
>gi|228955032|ref|ZP_04117048.1| amino-acid racemase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|228804658|gb|EEM51261.1| amino-acid racemase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
Length = 235
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 62/165 (37%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA ++ RS S+ L V QA T + +++L+T
Sbjct: 78 AQKLESTGASFIAMPCNTAHLYFEELQRSL--SIPILNIVDETLQAIPET-AKRVALLAT 134
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + ++ + G E +++ I +
Sbjct: 135 EATVQAGIYQDGIAKRNIEYIHYEKWQTMINQIIMYIKSGEV----EEARKLWSALIVQL 190
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT ++ D++D+S +A+ +
Sbjct: 191 KDEVDTAIIACTDLNVVASE---------DFVDSSQCLAKAVVRM 226
>gi|306479879|emb|CBV36120.1| glutamate racemase [Helicobacter pylori]
Length = 100
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 15/99 (15%), Positives = 29/99 (29%), Gaps = 9/99 (9%)
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIAR 228
++ + F E +V++L CTH+PLI + + D+I
Sbjct: 3 IVRTCMRYYFTPLEI-LPEVVILGCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVE 61
Query: 229 RARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
+ F SG ++ +
Sbjct: 62 YLQQ--KYALKKNACAFPKVEFHASGDVIWLEKQAKEWL 98
>gi|301597799|ref|ZP_07242807.1| glutamate racemase [Acinetobacter baumannii AB059]
Length = 75
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 6/65 (9%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Query: 205 IVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH-QTRVFDDHALFLSGKPDIAMRRL 263
+ +++ + ++ S+++ + L + + + ++ +H ++ S P
Sbjct: 1 VSDTIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLNSESPNEGNHIIWTSSDPLEVADIT 60
Query: 264 MQGFG 268
G
Sbjct: 61 FSLLG 65
>gi|213029645|ref|ZP_03344092.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 199
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 61/188 (32%), Gaps = 7/188 (3%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R + + +L+ VI CNTA D+L++ + + + A + +
Sbjct: 17 RYLERYLHMLEDAGAECIVIPCNTAH-YWFDDLQNVAKA-RMISILDATLGDIPPS-ARH 73
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +L+T ATL + + L + + + +
Sbjct: 74 VGLLATNATLATGLYQKKALARGLTLIQPEDAGQALVMQAIYTLKRG--DKTAAQALLLP 131
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ I++ CT PLIV + +D++ S+ R A +
Sbjct: 132 QIDSLIARGAQAIIMGCTEIPLIVAGHERAI--ACPMIDSTASLVRAAIRWYESWPDTRA 189
Query: 243 RVFDDHAL 250
+ + L
Sbjct: 190 SLTGEQRL 197
>gi|154488878|ref|ZP_02029727.1| hypothetical protein BIFADO_02186 [Bifidobacterium adolescentis
L2-32]
gi|154083015|gb|EDN82060.1| hypothetical protein BIFADO_02186 [Bifidobacterium adolescentis
L2-32]
Length = 230
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 18/166 (10%), Positives = 48/166 (28%), Gaps = 11/166 (6%)
Query: 74 KYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAI-KQAAAYTQSGLISI--LSTPA 130
V+ CNTA D+ ++ A+ + A Y ++ + L T
Sbjct: 64 TMGASFIVLTCNTAH-YFYDDFQALTTVPILHMPRGAVARMAQRYPKNRFPRVGFLGTVG 122
Query: 131 TLRRTYTSNLIHSYVSQCH--IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
+ + + + + I + ++ ++ + + +
Sbjct: 123 SRKSGVYKRAVEEAGYTFVEPTDELQARITSLIYDDVKGSGELNLERYESVLRDMLDPAG 182
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSP-WPVDWLDNSDSIARRARCL 233
D ++L CT ++ + P + +D +
Sbjct: 183 PCACDTLILGCTELSVL----NEAFPLPQLPVIDAQAVLVEDTVAR 224
>gi|324328651|gb|ADY23911.1| aspartate racemase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 224
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 62/165 (37%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA ++ RS S+ L V QA +++L+T
Sbjct: 67 AQKLESTGASFIAMPCNTAHLYFEELQRSL--SIPILNIVDETLQAIPK-NVKRVALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + + + IK E E +E+ + K
Sbjct: 124 EATVQAGIYQDGITKRDIEY----IHHETWQEMINQIITWIKSGEIEEARELWNALVLKL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+ D ++ACT ++ D++D+S +A+ +
Sbjct: 180 REEVDTAIIACTDLNVVASE---------DFVDSSQCLAKAIVRM 215
>gi|121611642|ref|YP_999449.1| aspartate racemase [Verminephrobacter eiseniae EF01-2]
gi|121556282|gb|ABM60431.1| aspartate racemase [Verminephrobacter eiseniae EF01-2]
Length = 246
Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 30/155 (19%), Positives = 54/155 (34%), Gaps = 7/155 (4%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L IACNTA L+ FP + L Q+ A + +++++T T
Sbjct: 84 LAALGSRAVAIACNTAHA-WHANLQERFPQVELLHIARETAQSLAAQGATEVALMATEGT 142
Query: 132 LRRTYTSNLIHSYVSQCHIHL--VSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
R + CH+ L I+ + G + E+ E+ G
Sbjct: 143 YRVRLYEQALAEAGLGCHVPLADERQTIMRGIFDGVKAGNMPLAGQCFSEVALRLAERHG 202
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSD 224
I++ CT PL + ++ + +D +
Sbjct: 203 SV--TIIMGCTEVPLGLQGSAAMAG--LSLVDPAQ 233
>gi|16763318|ref|NP_458935.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. CT18]
gi|29144796|ref|NP_808138.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|213428375|ref|ZP_03361125.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E02-1180]
gi|213581046|ref|ZP_03362872.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-0664]
gi|213609708|ref|ZP_03369534.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-2068]
gi|289825451|ref|ZP_06544682.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-3139]
gi|25512393|pir||AD1067 probable aspartate racemase [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16505627|emb|CAD03355.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29140435|gb|AAO71998.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 244
Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 61/188 (32%), Gaps = 7/188 (3%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R + + +L+ VI CNTA D+L++ + + + A + +
Sbjct: 62 RYLERYLHMLEDAGAECIVIPCNTAH-YWFDDLQNVAKA-RMISILDATLGDIPPS-ARH 118
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +L+T ATL + + L + + + +
Sbjct: 119 VGLLATNATLATGLYQKKALARGLTLIQPEDAGQALVMQAIYTLKRG--DKTAAQALLLP 176
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ I++ CT PLIV + +D++ S+ R A +
Sbjct: 177 QIDSLIARGAQAIIMGCTEIPLIVAGHERAI--ACPMIDSTASLVRAAIRWYESWPDTRA 234
Query: 243 RVFDDHAL 250
+ + L
Sbjct: 235 SLTGEQRL 242
>gi|168234643|ref|ZP_02659701.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194735758|ref|YP_002117430.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|204926710|ref|ZP_03217912.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|194711260|gb|ACF90481.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197291651|gb|EDY31001.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|204323375|gb|EDZ08570.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
Length = 244
Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 61/188 (32%), Gaps = 7/188 (3%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R + + +L+ VI CNTA D+L++ + + + A + +
Sbjct: 62 RYLERYLHMLEDAGAECIVIPCNTAH-YWFDDLQNVAKA-RMISILDATLGDIPPS-ARH 118
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +L+T ATL + + L + + + +
Sbjct: 119 VGLLATNATLATGLYQKKALARGLTLIQPEDAGQALVMQAIYTLKRG--DKTAAQALLLP 176
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ I++ CT PLIV + +D++ S+ R A +
Sbjct: 177 QIDSLIARGAQAIIMGCTEIPLIVAGHERAI--ACPMIDSTASLVRAAIRWYESWPDTRA 234
Query: 243 RVFDDHAL 250
+ + L
Sbjct: 235 SLTGEQRL 242
>gi|262166638|ref|ZP_06034375.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Vibrio
mimicus VM223]
gi|262026354|gb|EEY45022.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Vibrio
mimicus VM223]
Length = 423
Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/246 (11%), Positives = 62/246 (25%), Gaps = 29/246 (11%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMP-EYHFIYVADDVGF------PY---GNWEDHALK 61
++ +I + +G+GG+ V+ ++R +P ++ I +++ F P+ G +
Sbjct: 1 MKRTI-VIGAGLGGMSVVYELRQRLPKDHEVILISESNEFHFIPSNPWVALGERTKEQVI 59
Query: 62 KRLMFLFSDILDKYQPVLS--------VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
L + P + + D L AVP
Sbjct: 60 LDLTPYAQKFKIPFNPTGVTQIQPEENTVISGDGESYHYDYLVICTGPKLAFEAVPGAGP 119
Query: 114 AAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE 173
YTQS + A LI + + + E
Sbjct: 120 ETGYTQSICTVDHAVKAH---EAYQELITNPGPVLVGAMQGASCFGPAYEYILTLESQLR 176
Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACT-------HYPLIVHVFRQLSPWPVDWLDNSDSI 226
++ + L + + + V D+ +
Sbjct: 177 KLKIRDKIPITFVTSEPYVGHMGLGGVGDSKALMEHEFRDRGIKWVCNARVTQFDSDTAH 236
Query: 227 ARRARC 232
Sbjct: 237 IEELNR 242
>gi|16767754|ref|NP_463369.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|56416294|ref|YP_153369.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|167551230|ref|ZP_02344985.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|167991305|ref|ZP_02572404.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168232862|ref|ZP_02657920.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|168243994|ref|ZP_02668926.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|194451334|ref|YP_002048531.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194469149|ref|ZP_03075133.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|197365218|ref|YP_002144855.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|238910673|ref|ZP_04654510.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|16423076|gb|AAL23328.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|56130551|gb|AAV80057.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|194409638|gb|ACF69857.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194455513|gb|EDX44352.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|197096695|emb|CAR62317.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|205323833|gb|EDZ11672.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|205330368|gb|EDZ17132.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205333029|gb|EDZ19793.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|205337028|gb|EDZ23792.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|261249596|emb|CBG27465.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267996863|gb|ACY91748.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301160993|emb|CBW20529.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312915607|dbj|BAJ39581.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|321222517|gb|EFX47589.1| Aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|323132850|gb|ADX20280.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|332991319|gb|AEF10302.1| putative aspartate racemase [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 244
Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 61/188 (32%), Gaps = 7/188 (3%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R + + +L+ VI CNTA D+L++ + + + A + +
Sbjct: 62 RYLERYLHMLEDAGAECIVIPCNTAH-YWFDDLQNVAKA-RMISILDATLGDIPPS-ARH 118
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +L+T ATL + + L + + + +
Sbjct: 119 VGLLATNATLATGLYQKKALARGLTLIQPEDAGQALVMQAIYTLKRG--DKTAAQALLLP 176
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ I++ CT PLIV + +D++ S+ R A +
Sbjct: 177 QIDSLIARGAQAIIMGCTEIPLIVAGHERAI--ACPMIDSTASLVRAAIRWYESWPDTRA 234
Query: 243 RVFDDHAL 250
+ + L
Sbjct: 235 SLTGEQRL 242
>gi|42783941|ref|NP_981188.1| aspartate racemase family protein [Bacillus cereus ATCC 10987]
gi|42739871|gb|AAS43796.1| aspartate racemase family protein [Bacillus cereus ATCC 10987]
Length = 225
Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L +EL S+ L V Q +++L+T
Sbjct: 67 AQKLESTGVDFIAMPCNTAH-LYFEEL-QHSLSIPILNIVDETLQIIPK-NVKRVALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + + + IK E E +E+ + +
Sbjct: 124 EATVQAGIYQDGITKRDIEY----IHHETWQEMINQIITYIKYGEVEEARELWNALVLQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+ D ++ACT ++ D++D+S +A+ +
Sbjct: 180 REEVDTAIIACTDLNVVASE---------DFVDSSQCLAKAVVRM 215
>gi|306480324|emb|CBV36548.1| glutamate racemase [Helicobacter pylori]
Length = 84
Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 27/82 (32%), Gaps = 8/82 (9%)
Query: 192 TDVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+VI+L CTH+PLI P P + + D+I + T F
Sbjct: 3 PEVIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVEYLQQ--KYALKKNTHAF 60
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 61 PKVEFHASGDVIWLEKQAKEWL 82
>gi|257460061|ref|ZP_05625165.1| aspartate racemase [Campylobacter gracilis RM3268]
gi|257442502|gb|EEV17641.1| aspartate racemase [Campylobacter gracilis RM3268]
Length = 226
Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 30/203 (14%), Positives = 57/203 (28%), Gaps = 25/203 (12%)
Query: 45 ADDVGFPYGNWEDHALKKRLMFLFSD-------------ILDKYQPVLSVIACNTAFTLI 91
D P ++ R F+ L +ACNTA
Sbjct: 30 GDQENIPLVIDSYPQIEDRTAFILGKGENPLPRLSESAVRLKNAGCRAFAMACNTAHFFA 89
Query: 92 KDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISILSTPATLRRTYTSNLIHSYVSQCH 149
D + + +A + I++L+T T + + +
Sbjct: 90 DDV--EAAAEIPLIHIAEVTVKAIRKNYPNAHKIAVLATIGTKKAKIYDDPLKEAGL-IS 146
Query: 150 IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVF 209
+ L Y K E E + + D+ V+ACT PL + +
Sbjct: 147 VDLGEENQAVLMDCIYKGVKAGKTAEYVGAFENLLGKIDA---DIYVVACTELPLFLPLI 203
Query: 210 RQLSPWPVDWLDNSDSIARRARC 232
+ ++D + +A+
Sbjct: 204 K----SDKIFVDPTRELAKAIVE 222
>gi|306479692|emb|CBV35939.1| glutamate racemase [Helicobacter pylori]
Length = 94
Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 28/95 (29%), Gaps = 9/95 (9%)
Query: 179 EIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARC 232
+ F + +VI+L CTH+PLI + + D+I +
Sbjct: 1 CMRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMGHFALSTPPLLIHSGDAIVEYLQQ 59
Query: 233 LLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
T F SG ++ +
Sbjct: 60 --KYALKKNTHAFPKVEFHASGDVIWLEKQAKEWL 92
>gi|322615680|gb|EFY12600.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322618740|gb|EFY15629.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322621846|gb|EFY18696.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322627571|gb|EFY24362.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322630877|gb|EFY27641.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322637904|gb|EFY34605.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322642267|gb|EFY38874.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322643862|gb|EFY40410.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322651060|gb|EFY47445.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322656685|gb|EFY52973.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322659891|gb|EFY56134.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322661900|gb|EFY58116.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322666353|gb|EFY62531.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322672772|gb|EFY68883.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322676202|gb|EFY72273.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322680686|gb|EFY76724.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322684420|gb|EFY80424.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|323194243|gb|EFZ79440.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323197389|gb|EFZ82529.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323201494|gb|EFZ86558.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323206008|gb|EFZ90970.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|323213019|gb|EFZ97821.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323215392|gb|EGA00136.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323219375|gb|EGA03860.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323226196|gb|EGA10413.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323228849|gb|EGA12978.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323236540|gb|EGA20616.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323239960|gb|EGA24007.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323241994|gb|EGA26023.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323247859|gb|EGA31796.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323251502|gb|EGA35373.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323258132|gb|EGA41809.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323263725|gb|EGA47246.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323265681|gb|EGA49177.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323270126|gb|EGA53574.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
Length = 244
Score = 46.9 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 61/188 (32%), Gaps = 7/188 (3%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R + + +L+ VI CNTA D+L++ + + + A + +
Sbjct: 62 RYLERYLHMLEDAGAECIVIPCNTAH-YWFDDLQNVAKA-RMISILDATLGDIPPS-ARH 118
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +L+T ATL + + L + + + +
Sbjct: 119 VGLLATNATLATGLYQKKALARGLTLIQPEDAGQALVMQAIYTLKRG--DKTVAQALLLP 176
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ I++ CT PLIV + +D++ S+ R A +
Sbjct: 177 QIDSLIARGAQAIIMGCTEIPLIVAGHERAI--ACPMIDSTASLVRAAIRWYESWPDTRA 234
Query: 243 RVFDDHAL 250
+ + L
Sbjct: 235 SLTGEQRL 242
>gi|229193040|ref|ZP_04319996.1| amino-acid racemase [Bacillus cereus ATCC 10876]
gi|228590487|gb|EEK48350.1| amino-acid racemase [Bacillus cereus ATCC 10876]
Length = 224
Score = 46.9 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 64/165 (38%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA K+ RS S+ L V +A T + +++L+T
Sbjct: 67 AQKLESTGASFIAMPCNTAHLYFKELQRSL--SIPILNIVDETLKAIPET-AKRVALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + + + + IK E E +++ + +
Sbjct: 124 EATVQAGIYQDGIAKRNIEY----IHYEKWQTMINQIITYIKSGEVEEARKLWSALVVQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT ++ D++D+S +A+ +
Sbjct: 180 KDEVDTAIIACTDLNVVASE---------DFVDSSQCLAKAVVRM 215
>gi|154685011|ref|YP_001420172.1| hypothetical protein RBAM_005490 [Bacillus amyloliquefaciens FZB42]
gi|154350862|gb|ABS72941.1| RacX [Bacillus amyloliquefaciens FZB42]
Length = 226
Score = 46.9 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 23/176 (13%), Positives = 64/176 (36%), Gaps = 16/176 (9%)
Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
+ A+ + + L +K I CNTA + ++++ + I +
Sbjct: 60 EKAIIEGAVKL-----EKTGVDFIAIPCNTAH-IYFNQIKKSISVPLLNMVDETINKIPK 113
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
++ ++L+T T++ ++ + + + +E+ G + +
Sbjct: 114 GSKK--AALLATVPTVQSGIFQEALNREGYDFLHQVSWQIYVDHIIEKIKQGQINEAGTL 171
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232
E+ E + D +++ACT ++ + ++D+S +A+
Sbjct: 172 YDELHRELAE----KVDTVIIACTDLNMVTDQKS----SELTFVDSSACLAQAIVN 219
>gi|306479723|emb|CBV35969.1| glutamate racemase [Helicobacter pylori]
Length = 84
Score = 46.9 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 26/82 (31%), Gaps = 8/82 (9%)
Query: 192 TDVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
+VI+L CTH+PLI P P + + D+I + F
Sbjct: 3 PEVIILGCTHFPLIAQKIESYFMGHFSLPTPPLLIHSGDAIVEYLQQ--KYALKKNAHAF 60
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 61 PKVEFHASGDVIWLEKQAKEWL 82
>gi|241889778|ref|ZP_04777076.1| putative glutamate racemase [Gemella haemolysans ATCC 10379]
gi|241863400|gb|EER67784.1| putative glutamate racemase [Gemella haemolysans ATCC 10379]
Length = 219
Score = 46.9 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 27/177 (15%), Positives = 62/177 (35%), Gaps = 10/177 (5%)
Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNT-AFTLIKDELRSTFPSMAFLGAVPAIKQAA 115
+ ++ ++ D L + + CN+ + + D L P
Sbjct: 47 EDEERENIIVKIIDELKEKDCYAIFVYCNSLSSVVDFDRLAEKM---NISIITPMQMYRN 103
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
+ +++++ + +NL + + +S + L +EE +I ED
Sbjct: 104 LGFEYKYLAVMAANSHGLTGVENNLY-VSNPRLRVLGLSMLELVKAIEEGNKPEQILEDF 162
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232
K + F E + +VL CTH+P I +++ + +D + +
Sbjct: 163 NFKTLFNYF---ELTNVEAVVLGCTHFPYIKQELEKIT--NLHIIDVGVFMIESLKN 214
>gi|168821040|ref|ZP_02833040.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205342298|gb|EDZ29062.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|320084589|emb|CBY94380.1| probable aspartate racemase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
Length = 244
Score = 46.9 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 61/188 (32%), Gaps = 7/188 (3%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R + + +L+ VI CNTA D+L++ + + + A + +
Sbjct: 62 RYLERYLHMLEDAGAECIVIPCNTAH-YWFDDLQNVAKA-RMISILDATLGDIPPS-ARH 118
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +L+T ATL + + L + + + +
Sbjct: 119 VGLLATNATLATGLYQKKALARGLTLIQPEDAGQALVMQAIYTLKRG--DKTAAQALLLP 176
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+ I++ CT PLIV + +D++ S+ R A +
Sbjct: 177 QIDSLIARGAQAIIMGCTEIPLIVAGHERAI--ACPMIDSTASLVRAAIRWYESWPDTRV 234
Query: 243 RVFDDHAL 250
+ + L
Sbjct: 235 SLTGEQRL 242
>gi|254456471|ref|ZP_05069900.1| aspartate racemase [Candidatus Pelagibacter sp. HTCC7211]
gi|207083473|gb|EDZ60899.1| aspartate racemase [Candidatus Pelagibacter sp. HTCC7211]
Length = 248
Score = 46.5 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 27/166 (16%), Positives = 57/166 (34%), Gaps = 8/166 (4%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT--QSGLISIL 126
+L+K + VI CNTA D+L+ +++ + + + ++ I +L
Sbjct: 81 CKLLEKNKCKFIVIPCNTAH-YWFDDLQKKV-NISIINMPKEVFKFTKQNCKKNSKIGLL 138
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T TL N + ++ + +K +
Sbjct: 139 ATEGTLNTGVYHNFFNKNYDLVQPSQTLQKKSVNKAIKLVKMGNVKAAAKAIK--PAINS 196
Query: 187 KEGKRTDVIVLACTHYPLIVHVFR--QLSPWPVDWLDNSDSIARRA 230
+ I+L CT P+ + F+ + +LD + +A A
Sbjct: 197 LLKMKCKKIILGCTELPIAIFAFKSFENVKSSKIFLDPNLILANSA 242
>gi|306480416|emb|CBV36636.1| glutamate racemase [Helicobacter pylori]
Length = 81
Score = 46.5 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 25/81 (30%), Gaps = 8/81 (9%)
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+V++L CTH+PLI H + + D+I + F
Sbjct: 1 EVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFP 58
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 KVEFHASGDVVWLEKQAKEWL 79
>gi|329888424|ref|ZP_08267022.1| aspartate racemase [Brevundimonas diminuta ATCC 11568]
gi|328846980|gb|EGF96542.1| aspartate racemase [Brevundimonas diminuta ATCC 11568]
Length = 220
Score = 46.5 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 57/168 (33%), Gaps = 10/168 (5%)
Query: 63 RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL 122
R + + L + + CNTA + F+ + +AA T +
Sbjct: 58 RTLGEMARALKAAGAQVLAMPCNTAHAHAGAI---RAAGLPFIDMIAETAKAAGATGARR 114
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
+ +L+TP + + + + ++ +V + D+ + +
Sbjct: 115 VGVLATPG--AALLYAEALAAEGLEMVAPSLAERERFMQVVFGVKAGDVGPDQ-RAAMRD 171
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT PL++ +P +D+++ +AR
Sbjct: 172 LAKALIAAGAEAVIGGCTEVPLLLDQGDVDAP----LIDSAEVLARAC 215
>gi|312897382|ref|ZP_07756806.1| aspartate racemase [Megasphaera micronuciformis F0359]
gi|310621443|gb|EFQ04979.1| aspartate racemase [Megasphaera micronuciformis F0359]
Length = 228
Score = 46.5 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 24/179 (13%), Positives = 49/179 (27%), Gaps = 8/179 (4%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIK 112
G + L L ++ L + + NT + S + + +V
Sbjct: 51 GQKDYAGLTAYLDKGITN-LVAGGAQVVAMTGNTPHIVFDKL--SEKSHVPLVSSVAVTA 107
Query: 113 QAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK 172
A +L T T+R + + + + + + E
Sbjct: 108 HYVAEQGLKRPLLLGTLFTMREDFFKKAFRDKGIEAIVPEEADQLKVHKFIEKELEAGSI 167
Query: 173 EDEIKKEIEGCFIEKEGKR-TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ +K E G D ++L CT + + V +D +D
Sbjct: 168 TETAQKYFSNLVEEMIGSHHIDTLILGCTEL----PILFKTMNISVPVVDVTDVHVEAL 222
>gi|302390707|ref|YP_003826528.1| Asp/Glu/hydantoin racemase [Thermosediminibacter oceani DSM 16646]
gi|302201335|gb|ADL08905.1| Asp/Glu/hydantoin racemase [Thermosediminibacter oceani DSM 16646]
Length = 219
Score = 46.5 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 31/172 (18%), Positives = 61/172 (35%), Gaps = 10/172 (5%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
AL ++++ + D K +I CN+ I EL S A P
Sbjct: 53 DALTRKVIAIIGDF-QKLDIKNVMIYCNSLSAAIDLELVKHECS-AVNIVTPLQVYRNLA 110
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
++ + + + +++ I VS + + +E E +K
Sbjct: 111 SRYRRLVVWAANG-RCLQTIEKILYENNPAIQIIGVSLLPVIVAIENLER----PETIVK 165
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
K + +G + +VL CTH P + ++ PV +D ++ + R
Sbjct: 166 KFDLADLV-FKGFNPEGLVLGCTHLPYLKEKLEEIFSAPV--IDPAEEMLRD 214
>gi|306479990|emb|CBV36226.1| glutamate racemase [Helicobacter pylori]
Length = 94
Score = 46.5 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 26/94 (27%), Gaps = 8/94 (8%)
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCL 233
+ +V++L CTH+PLI H + + D+I +
Sbjct: 1 CMRYYFAPLEILPEVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ- 59
Query: 234 LPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
F SG ++ +
Sbjct: 60 -KYALKKNACAFPKVEFHASGDVIWLEKQAKEWL 92
>gi|260583752|ref|ZP_05851500.1| glutamate racemase [Granulicatella elegans ATCC 700633]
gi|260158378|gb|EEW93446.1| glutamate racemase [Granulicatella elegans ATCC 700633]
Length = 215
Score = 46.5 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 25/173 (14%), Positives = 59/173 (34%), Gaps = 10/173 (5%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
+ ++ KY + V + + + D+L + P
Sbjct: 53 AFMREKVEELRAKYDA-IFVYCNSLSSVVDFDQLSQEYE---MPMITPMQMYRQLAMDYQ 108
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++++ + +NL + + ++ + L +E +I IK +
Sbjct: 109 QVAVMAANSHGLMGVENNLYKA-NPSLQVIGITLLELVKSIEANLSPKEI---AIKFDFS 164
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
F G + ++L CTH+P I L+ + +D + + R + L
Sbjct: 165 SLFTFFNGSNVEAVILGCTHFPYIKEELESLT--KLPIIDVGEYMVRTLKEKL 215
>gi|302542803|ref|ZP_07295145.1| aspartate racemase [Streptomyces hygroscopicus ATCC 53653]
gi|302460421|gb|EFL23514.1| aspartate racemase [Streptomyces himastatinicus ATCC 53653]
Length = 257
Score = 46.5 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 22/172 (12%), Positives = 39/172 (22%), Gaps = 19/172 (11%)
Query: 29 LQKMRFLMPEYHFIYVADDVGFPYGNWEDHALKKRLMFLFSD-------------ILDKY 75
K+ P D P W D + R L +
Sbjct: 34 YAKLIRATPAAR-----DQDHVPVVIWADPTIPDRTAALLDHGADPSPWLKRGAHYVALA 88
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
L + CNTA + + P ++ A + IL+T TL
Sbjct: 89 GANLIAVPCNTAHAFLGAVRSAAAPVPVLDMVAETAEEVARSQPGATVGILATTGTLTAE 148
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
N + + I ++ ++ +
Sbjct: 149 LYQNALSRCGLKPLIPDSTAQQAVMSAIRQVKAGG-DLAHARRLMSPALRSL 199
>gi|75763381|ref|ZP_00743116.1| Aspartate racemase [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|74489131|gb|EAO52612.1| Aspartate racemase [Bacillus thuringiensis serovar israelensis ATCC
35646]
Length = 235
Score = 46.5 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA ++ RS S+ L V QA + +++L+T
Sbjct: 78 AQKLESTGVSFIAMPCNTAHLYFEELQRSL--SIPILNIVDETLQAIPE-NTKRVALLAT 134
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + + + IK E E +E+ + +
Sbjct: 135 EATVQARIYQDGIAKRNIEY----IHHEKWQESINQIITCIKSGEIEEARELWNTLVLQL 190
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT ++ D++D+S +A +
Sbjct: 191 RDEIDTAIIACTDLNVVASE---------DFIDSSQCLADAVVEM 226
>gi|228903273|ref|ZP_04067405.1| amino-acid racemase [Bacillus thuringiensis IBL 4222]
gi|228856374|gb|EEN00902.1| amino-acid racemase [Bacillus thuringiensis IBL 4222]
Length = 224
Score = 46.5 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA ++ RS S+ L V QA + +++L+T
Sbjct: 67 AQKLESTGVSFIAMPCNTAHLYFEELQRSL--SIPILNIVDETLQAIPE-NTKRVALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + + + IK E E +E+ + +
Sbjct: 124 EATVQARIYQDGIAKRNIEY----IHHEKWQESINQIITCIKSGEIEEARELWNTLVLQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT ++ D++D+S +A +
Sbjct: 180 RDEIDTAIIACTDLNVVASE---------DFIDSSQCLADAVVEM 215
>gi|228988009|ref|ZP_04148113.1| amino-acid racemase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|228771726|gb|EEM20188.1| amino-acid racemase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
Length = 224
Score = 46.1 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 62/165 (37%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L +EL+ + ++ T+ +++L+T
Sbjct: 67 AQKLESTGVEFLAMPCNTAH-LYFEELQRSLSVPILNIVDETLQAIPENTK--RVALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + +I + + + IK + E E+ + +
Sbjct: 124 EATVQAGIYQDGI----IKRNIEYIHHEKWQESINQIISCIKGGKIEKAHELWNVLVLQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT ++ D++D++ +A+ +
Sbjct: 180 RDEVDTAIIACTDLNVVASE---------DFVDSAQCLAKAVVKM 215
>gi|282852139|ref|ZP_06261496.1| conserved domain protein [Lactobacillus gasseri 224-1]
gi|282556703|gb|EFB62308.1| conserved domain protein [Lactobacillus gasseri 224-1]
Length = 38
Score = 46.1 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 13 QNSILIFDSGIGGLIVLQK 31
I + DSG+GGL VL+K
Sbjct: 20 NRPIGVLDSGLGGLTVLKK 38
>gi|227539078|ref|ZP_03969127.1| aspartate racemase [Sphingobacterium spiritivorum ATCC 33300]
gi|227241082|gb|EEI91097.1| aspartate racemase [Sphingobacterium spiritivorum ATCC 33300]
Length = 248
Score = 46.1 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 65/192 (33%), Gaps = 20/192 (10%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTL-----IKDELRSTFPSMAFLGAVPAI-KQAA 115
M L+K ++ I C+TA + I+ EL++ + L V A
Sbjct: 60 AYAMADIISELEKSGATVAAIPCHTAHAVPIFDIIRYELQNKEHKIRLLHMVEETSDYIA 119
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIK--- 172
+ S ++ IL+T +++ + + + +++ +
Sbjct: 120 THFTSPVVGILTTTGIRNTGLYNHVFAAKGLKVI---QPAEEWQEKIQAAIHDEQYGIKA 176
Query: 173 -----EDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
+ K+E+ G E + + VIVL CT R+ + +D + +A
Sbjct: 177 SSSPVTNRAKEELVGAIHELKKEGATVIVLGCTELSWA---LREKEISGLPLVDPNRILA 233
Query: 228 RRARCLLPRINT 239
R +
Sbjct: 234 RALIRTVAPEKL 245
>gi|228967857|ref|ZP_04128869.1| amino-acid racemase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228791823|gb|EEM39413.1| amino-acid racemase [Bacillus thuringiensis serovar sotto str.
T04001]
Length = 224
Score = 46.1 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 60/165 (36%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA ++ RS S+ L V QA + +++L+T
Sbjct: 67 AQKLESTGVSFIAMPCNTAHLYFEELQRSL--SIPILNIVDETLQAIPE-NTKRVALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + + + K E E +E+ + +
Sbjct: 124 EATVQARIYQDGIAKRNIEY----IHHEKWQESINQIITCSKSGEIEEARELWNTLVLQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT ++ D++D+S +A +
Sbjct: 180 RDEIDTAIIACTDLNVVASE---------DFVDSSQCLADAVVEM 215
>gi|119026105|ref|YP_909950.1| aspartate racemase [Bifidobacterium adolescentis ATCC 15703]
gi|118765689|dbj|BAF39868.1| aspartate racemase [Bifidobacterium adolescentis ATCC 15703]
Length = 241
Score = 46.1 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 18/165 (10%), Positives = 47/165 (28%), Gaps = 11/165 (6%)
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAI-KQAAAYTQSGLISI--LSTPAT 131
V+ CNTA D+ ++ A+ + A Y + + L T +
Sbjct: 76 MGASFIVLTCNTAH-YFYDDFQALTTVPILHMPRGAVARMAQRYPKDRFPRVGFLGTVGS 134
Query: 132 LRRTYTSNLIHSYVSQCH--IHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
+ + + + I + ++ ++ + + +
Sbjct: 135 RKSGVYKRAVEEAGYTFVEPTDELQARITSLIYDDVKGSGELNLERYESVLRDMLDPAGP 194
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSP-WPVDWLDNSDSIARRARCL 233
D ++L CT ++ + P + +D +
Sbjct: 195 CACDTLILGCTELSVL----NEAFPLPQLPVIDAQAVLVEDTVAR 235
>gi|91762966|ref|ZP_01264931.1| Aspartate racemase [Candidatus Pelagibacter ubique HTCC1002]
gi|91718768|gb|EAS85418.1| Aspartate racemase [Candidatus Pelagibacter ubique HTCC1002]
Length = 248
Score = 46.1 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 57/165 (34%), Gaps = 6/165 (3%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA-IKQAAAYTQSGLISILS 127
L+K VI CNTA ++L+ I+ + ++ I +L+
Sbjct: 81 CKSLEKSGCKFIVIPCNTAH-YWYEDLKKKIKIPIINMPKEVFIQTKKSCKKNSKIGLLA 139
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
T TL+ + ++ ++ IK E K I+
Sbjct: 140 TEGTLKTEIYDKIFKKDYVLIKPLSNLQTSSVNKTIKHVKMGNIKLAE--KTIKPAIKYL 197
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVD--WLDNSDSIARRA 230
++ I+L CT P+ + ++ L V +LD + +A
Sbjct: 198 IKQKCKKIILGCTEIPIAIFAYKSLQNAKVSKLYLDPNLILANSC 242
>gi|210621999|ref|ZP_03292942.1| hypothetical protein CLOHIR_00888 [Clostridium hiranonis DSM 13275]
gi|210154444|gb|EEA85450.1| hypothetical protein CLOHIR_00888 [Clostridium hiranonis DSM 13275]
Length = 215
Score = 45.7 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 59/168 (35%), Gaps = 8/168 (4%)
Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
K+ M + + + + CN+ + + E S ++ + + A K+ A
Sbjct: 47 PQETKELEMKKIINKIKECGIKKIFVYCNSLSSAVDMEKLSKEENIVIVTPMDAYKKIAV 106
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
S + + + I C++ + + + VE I D
Sbjct: 107 DYNS--VGVFAAN-NQGLAGIERTIVEKNKNCNVIGIGILPVVLDVEAKKQAQDIIAD-- 161
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSD 224
++ E + + I+L CTH+P ++ + ++ ++ S+
Sbjct: 162 -NHLDLAVEFFEKNKVEAIILGCTHFPYFEKELKKCT--ELEIINPSE 206
>gi|306480232|emb|CBV36460.1| glutamate racemase [Helicobacter pylori]
Length = 93
Score = 45.7 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 18/94 (19%), Positives = 29/94 (30%), Gaps = 9/94 (9%)
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCL 233
+ F + VI+L CTH+PLI P P + + D+I +
Sbjct: 1 MRYYFTPLKI-LPKVIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVEYLQQK 59
Query: 234 LPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
N F SG ++ +
Sbjct: 60 YALKN--NACAFPKVEFHASGDVIWLEKQAKEWL 91
>gi|218236145|ref|YP_002369551.1| aspartate racemase family protein [Bacillus cereus B4264]
gi|218164102|gb|ACK64094.1| aspartate racemase family protein [Bacillus cereus B4264]
Length = 224
Score = 45.7 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 64/165 (38%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L +EL+ S+ L V QA + +++L+T
Sbjct: 67 AQKLESTGASFIAMPCNTAH-LYFEELQ-HSLSIPILNIVDETLQAIPK-NAKRVALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + + + + IK E E +++ + +
Sbjct: 124 EATVQAGIYQDGIAKRNIEY----IHYEKWQTMINQIITYIKSGEVEKARKLWSALVVQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT ++ +++D+S +A+ +
Sbjct: 180 KDEVDTAIIACTDLNVVASE---------NFVDSSQCLAKAVVRM 215
>gi|218899907|ref|YP_002448318.1| probable amino-acid racemase [Bacillus cereus G9842]
gi|218545086|gb|ACK97480.1| probable amino-acid racemase [Bacillus cereus G9842]
Length = 224
Score = 45.7 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA ++ RS S+ L V QA + +++L+T
Sbjct: 67 AQKLESTGVSFIAMPCNTAHLYFEELQRSL--SIPILNIVDETLQAIPE-NTKRVALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + + + IK E E +E+ + +
Sbjct: 124 EATVQARIYQDGIAKRNIEY----IHHEKWQESINQIITCIKSGEIEEARELWNTLVLQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT ++ D++D+S +A +
Sbjct: 180 RDEIDTAIIACTDLNVVASE---------DFVDSSQCLADAVVEM 215
>gi|329767103|ref|ZP_08258631.1| hypothetical protein HMPREF0428_00328 [Gemella haemolysans M341]
gi|328837828|gb|EGF87453.1| hypothetical protein HMPREF0428_00328 [Gemella haemolysans M341]
Length = 217
Score = 45.7 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 27/177 (15%), Positives = 62/177 (35%), Gaps = 10/177 (5%)
Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTL-IKDELRSTFPSMAFLGAVPAIKQAA 115
+ ++ ++ D L + + CN+ ++ D L P
Sbjct: 47 EDEERENIIVKIIDELKEKDCGAIFVYCNSLSSVADFDRLAEKM---NISIITPMQMYRN 103
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
+ +++++ + +NL + + +S + L +EE +I ED
Sbjct: 104 LGLEYKYLAVMAANSHGLTGVENNLY-VSNPRLRVLGLSMLELVKAIEEGNKPEQIVEDF 162
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232
K + F E + +VL CTH+P I +++ + +D + +
Sbjct: 163 NFKTLFNYF---ELTNVEAVVLGCTHFPYIKKELEKIT--KLPIIDVGVFMIESLKR 214
>gi|306480080|emb|CBV36313.1| glutamate racemase [Helicobacter pylori]
Length = 82
Score = 45.7 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 24/82 (29%), Gaps = 8/82 (9%)
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVF 245
+V++L CTH+PLI + + D+I + F
Sbjct: 1 IEVVILGCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAF 58
Query: 246 DDHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 PKVEFHASGDVVWLEKQAKEWL 80
>gi|300770584|ref|ZP_07080463.1| aspartate racemase [Sphingobacterium spiritivorum ATCC 33861]
gi|300763060|gb|EFK59877.1| aspartate racemase [Sphingobacterium spiritivorum ATCC 33861]
Length = 247
Score = 45.7 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 27/189 (14%), Positives = 59/189 (31%), Gaps = 14/189 (7%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTL-----IKDELRSTFPSMAFLGAVPAI-KQAA 115
+ L++ + I C+TA + I+ EL+ + L V A
Sbjct: 60 AYAIAEIISELEQSGATVVGIPCHTAHAVPIFDIIRYELQKKEHKVRLLHMVEETSDYIA 119
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE-- 173
A+ + ++ IL+T +++ + +
Sbjct: 120 AHFTAPVVGILTTTGIRNTGLYNHVFAAKGLKVIQPPEEWQEKIQAAIHDEQYGIKASSS 179
Query: 174 ---DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ K+E+ E + + VI+L CT + R+ + +D + +AR
Sbjct: 180 PVTNRAKEELVAAIHELKKEGATVIILGCTE---LSGALREKEISGLPLVDPNRILARAL 236
Query: 231 RCLLPRINT 239
+
Sbjct: 237 IRTVAPEKL 245
>gi|270291607|ref|ZP_06197827.1| aspartate racemase [Pediococcus acidilactici 7_4]
gi|270279926|gb|EFA25764.1| aspartate racemase [Pediococcus acidilactici 7_4]
Length = 235
Score = 45.7 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 26/170 (15%), Positives = 54/170 (31%), Gaps = 11/170 (6%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ-SGLISILST 128
+ P VIACNTA D+L+ +KQ + I I+ T
Sbjct: 70 QQQSRLNPAFFVIACNTAH-YFYDDLQKATEIPIVHMPRETVKQIKKEFPAAKRIGIIGT 128
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK- 187
P T + + + + + + + ++++ ++ +
Sbjct: 129 PGTTTDGIYDRELIAEGYE---VVKPTPEIQDLTSKLIFEDIKAQNKVDAQLFYQILRLM 185
Query: 188 -EGKRTDVIVLACTHYPLIVHVFRQ----LSPWPVDWLDNSDSIARRARC 232
E + V++L CT + + +D S +A + R
Sbjct: 186 TEERGAQVVILGCTELSYAQEMAHDHSYPVVDSQSVLVDRSIELALKLRK 235
>gi|134101592|ref|YP_001107253.1| aspartate racemase [Saccharopolyspora erythraea NRRL 2338]
gi|291009953|ref|ZP_06567926.1| aspartate racemase [Saccharopolyspora erythraea NRRL 2338]
gi|133914215|emb|CAM04328.1| aspartate racemase [Saccharopolyspora erythraea NRRL 2338]
Length = 251
Score = 45.7 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 26/162 (16%), Positives = 53/162 (32%), Gaps = 7/162 (4%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ +L + + CNTA + + + + + AA + +L+T
Sbjct: 87 ARVLAAGGADVIAVPCNTAHAFLPAVVERVGVPLVHMIEQTSRHLAALRPPVRKVGLLAT 146
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
T+R + + + S A V IK +D+ + +
Sbjct: 147 TGTVRARLYETWLATAGIALLVP--DSTSQAEEVMAAIRSIKAGKDD-RGLLARAARRLV 203
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ I+ CT PL + + PV +D + +A
Sbjct: 204 DRDARAIIAGCTEIPLGLETGQL----PVPVVDPTQVLAEAV 241
>gi|306480495|emb|CBV36712.1| glutamate racemase [Helicobacter pylori v225d]
Length = 81
Score = 45.7 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 25/81 (30%), Gaps = 8/81 (9%)
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+V++L CTH+PLI H + + D+I R F
Sbjct: 1 EVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLRQ--KYALKKNACAFP 58
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 KVEFHASGDVIWLEKQAKEWL 79
>gi|115436938|ref|XP_001217683.1| hypothetical protein ATEG_09061 [Aspergillus terreus NIH2624]
gi|114188498|gb|EAU30198.1| hypothetical protein ATEG_09061 [Aspergillus terreus NIH2624]
Length = 600
Score = 45.7 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 22/157 (14%), Positives = 46/157 (29%), Gaps = 11/157 (7%)
Query: 81 VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG---LISILSTPATLRRTYT 137
A A +R+ + I +A+ YT +++T A + +T
Sbjct: 425 YDAFLVACYSDHPLIRALREELTAPVI--GIMEASLYTARMVGNRFGVVATSARSQVMHT 482
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ + + + + S + +E G + K + E K D + L
Sbjct: 483 DAVRNYGLEGFCVGVKSCGLGVLELEGKEEG------AVVKAMCRAARELVDKGADTLTL 536
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
C + V +D + +L
Sbjct: 537 GCAGMTTLKTAVETAVGKDVQVIDGVIAGVHHLVGIL 573
>gi|306480201|emb|CBV36430.1| glutamate racemase [Helicobacter pylori]
Length = 81
Score = 45.3 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 25/81 (30%), Gaps = 8/81 (9%)
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+V++L CTH+PLI H + + D+I + F
Sbjct: 1 EVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFP 58
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 KVEFHASGDVIWLEKQAKEWL 79
>gi|306480447|emb|CBV36666.1| glutamate racemase [Helicobacter pylori]
Length = 93
Score = 45.3 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 27/94 (28%), Gaps = 9/94 (9%)
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCL 233
+ F + +VI+L CTH+PLI + + D+I +
Sbjct: 1 MRYYFTPLKI-LPEVIILGCTHFPLIAQKIEGYFMGHFALSTPPLLIHSGDAIVEYLQK- 58
Query: 234 LPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
F SG ++ +
Sbjct: 59 -NYALKKNAHAFPKVEFHASGDVIWLEKQAKEWL 91
>gi|306479661|emb|CBV35909.1| glutamate racemase [Helicobacter pylori]
Length = 80
Score = 45.3 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 23/80 (28%), Gaps = 8/80 (10%)
Query: 194 VIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFDD 247
V++L CTH+PLI + + D+I + F
Sbjct: 1 VVILGCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFPK 58
Query: 248 HALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 VEFHASGDVVWLEKQAKEWL 78
>gi|229048455|ref|ZP_04194020.1| amino-acid racemase [Bacillus cereus AH676]
gi|228722885|gb|EEL74265.1| amino-acid racemase [Bacillus cereus AH676]
Length = 235
Score = 45.3 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 62/165 (37%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L +EL+ + ++ T+ +++L+T
Sbjct: 78 AQKLESTGASFIAMPCNTAH-LYFEELQRSLSIPILNIVDETLQSIPENTK--RVALLAT 134
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + + + + IK E E +++ + +
Sbjct: 135 EATVQAGIYQDGIAKRNIEY----IHYEKWQTMINQIITYIKSGEVEKARKLWSALVVQL 190
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D +++ACT ++ D++D+S +A +
Sbjct: 191 KDEVDTVIIACTDLNVVASE---------DFVDSSQCLANAVVRM 226
>gi|306480172|emb|CBV36402.1| glutamate racemase [Helicobacter pylori]
Length = 78
Score = 45.3 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 24/78 (30%), Gaps = 8/78 (10%)
Query: 196 VLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+L CTH+PLI P P + + D+I + + F
Sbjct: 1 ILGCTHFPLIARQIEGYFMGHFALPTPPLLIHSGDAIVEYLQQ--KYTLKNNAHAFPKVE 58
Query: 250 LFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 FHASGDVIWLEKQAKEWL 76
>gi|313139820|ref|ZP_07802013.1| monomeric aspartate racemase [Bifidobacterium bifidum NCIMB 41171]
gi|313132330|gb|EFR49947.1| monomeric aspartate racemase [Bifidobacterium bifidum NCIMB 41171]
Length = 241
Score = 45.3 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 21/165 (12%), Positives = 43/165 (26%), Gaps = 11/165 (6%)
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT---QSGLISILSTPAT 131
V+ CNTA D +S P A+ A + + L T +
Sbjct: 76 MGASFIVLTCNTAH-YFYDHFQSLTPVPILHMPRGAVAHMAGQYPKERFHRVGFLGTMGS 134
Query: 132 LRRTYTSNLIHSYVSQC-HIHLVSSMILASRVEEYACG-IKIKEDEIKKEIEGCFIEKEG 189
+ + S + + G + + ++
Sbjct: 135 RASGVYRQAVEEAGYTFVEPDDELQERITSLIYDDVKGTGDLNLQRYESVLQAMLDPAGT 194
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSP-WPVDWLDNSDSIARRARCL 233
R D ++L CT ++ + P + +D +
Sbjct: 195 CRCDTLMLGCTELSVL----NEAFPLPQLPIIDAQAVLVEDTVSR 235
>gi|224282662|ref|ZP_03645984.1| aspartate racemase [Bifidobacterium bifidum NCIMB 41171]
gi|311063986|ref|YP_003970711.1| aspartate racemase [Bifidobacterium bifidum PRL2010]
gi|310866305|gb|ADP35674.1| Aspartate racemase [Bifidobacterium bifidum PRL2010]
Length = 230
Score = 45.3 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 21/165 (12%), Positives = 43/165 (26%), Gaps = 11/165 (6%)
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT---QSGLISILSTPAT 131
V+ CNTA D +S P A+ A + + L T +
Sbjct: 65 MGASFIVLTCNTAH-YFYDHFQSLTPVPILHMPRGAVAHMAGQYPKERFHRVGFLGTMGS 123
Query: 132 LRRTYTSNLIHSYVSQC-HIHLVSSMILASRVEEYACG-IKIKEDEIKKEIEGCFIEKEG 189
+ + S + + G + + ++
Sbjct: 124 RASGVYRQAVEEAGYTFVEPDDELQERITSLIYDDVKGTGDLNLQRYESVLQAMLDPAGT 183
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSP-WPVDWLDNSDSIARRARCL 233
R D ++L CT ++ + P + +D +
Sbjct: 184 CRCDTLMLGCTELSVL----NEAFPLPQLPIIDAQAVLVEDTVSR 224
>gi|304384561|ref|ZP_07366907.1| aspartate racemase [Pediococcus acidilactici DSM 20284]
gi|304328755|gb|EFL95975.1| aspartate racemase [Pediococcus acidilactici DSM 20284]
Length = 235
Score = 45.0 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 26/170 (15%), Positives = 54/170 (31%), Gaps = 11/170 (6%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ-SGLISILST 128
+ P VIACNTA D+L+ +KQ + I I+ T
Sbjct: 70 QQQSRLNPAFFVIACNTAH-YFYDDLQKATEFPIVHMPRETVKQIKKEFPAAKRIGIIGT 128
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK- 187
P T + + + + + + + ++++ ++ +
Sbjct: 129 PGTTTDGIYDRELIAEGYE---VVKPTPEIQDLTSKLIFEDIKAQNKVDAQLFYQILRLM 185
Query: 188 -EGKRTDVIVLACTHYPLIVHVFRQ----LSPWPVDWLDNSDSIARRARC 232
E + V++L CT + + +D S +A + R
Sbjct: 186 TEERGAQVVILGCTELSYAQEMAHDHSYPVVDSQSVLVDRSIELALKLRK 235
>gi|188586853|ref|YP_001918398.1| Asp/Glu/hydantoin racemase [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179351540|gb|ACB85810.1| Asp/Glu/hydantoin racemase [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 228
Score = 45.0 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 59/168 (35%), Gaps = 11/168 (6%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L +I CN+ + + + + + K+ A Q+ +
Sbjct: 65 KELRDLGAEGVIIYCNSLSASLDLDKLKKLSPLPIVTPLDIYKEIANDFQTIALM----S 120
Query: 130 ATLRRTYT-SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT T ++ S + S + + ++E+ KI + K++ + +
Sbjct: 121 ATNSSNITIEKVMRQNNSYITVLGFSLLPVVLQIEKGVAPEKIVHEVGIKDLLAAISKLK 180
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLS---PWPVDWLDNSDSIARRARCL 233
+ ++LACTH+P +L + + +D ++ + +
Sbjct: 181 ---VESLILACTHFPYFKDEVDELISEQGYTFELIDPAEKMVEKFLNY 225
>gi|229112217|ref|ZP_04241757.1| amino-acid racemase [Bacillus cereus Rock1-15]
gi|228671201|gb|EEL26505.1| amino-acid racemase [Bacillus cereus Rock1-15]
Length = 224
Score = 45.0 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 62/165 (37%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L +EL S+ L V QA +++L+T
Sbjct: 67 AQKLESTGASFIAMPCNTAH-LYFEEL-QHSLSIPILNIVDETLQAIPK-NIKRVALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + + + + IK E E +++ + +
Sbjct: 124 EATVQAGIYQDGIAKRNIEY----IHYEKWQTMINQIITYIKSGEVEKARKLWSALVVQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D +++ACT ++ D++D+S +A +
Sbjct: 180 KDEVDTVIIACTDLNVVASE---------DFVDSSQCLANAVVRM 215
>gi|229181072|ref|ZP_04308405.1| amino-acid racemase [Bacillus cereus 172560W]
gi|228602400|gb|EEK59888.1| amino-acid racemase [Bacillus cereus 172560W]
Length = 224
Score = 45.0 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 65/165 (39%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA ++ RS S+ L V QA +++L+T
Sbjct: 67 AQKLESTGASFIAMPCNTAHLYFEELQRSL--SIPILNIVDETLQAIPE-NIKRVALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I ++ +I + + + IK E E +E+ + +
Sbjct: 124 EATVQSRIYQDGI----TKRNIEYIHHEKWQESINQIITCIKSGEIEEARELWNALVLQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+ D +++ACT ++ D++ +S +A+ +
Sbjct: 180 REEVDTVIIACTDLNVVASE---------DFVASSQCLAKAVVRM 215
>gi|91790218|ref|YP_551170.1| aspartate racemase [Polaromonas sp. JS666]
gi|91699443|gb|ABE46272.1| aspartate racemase [Polaromonas sp. JS666]
Length = 241
Score = 45.0 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 56/160 (35%), Gaps = 6/160 (3%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQ--AAAYTQSGLISILS 127
L+ +VI CNTA +L M + V ++ + A G I +L
Sbjct: 69 QFLESSGCSCAVIPCNTAH-YWYPDL-QMSVKMPLIHIVSSVVENLHARGIDGGRIGLLG 126
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK 187
TPAT+ + + + + +L V + + E +
Sbjct: 127 TPATVNSGLYKDKL-TNAGYTVLPYTEDDVLQLCVRPIQAVKQNRLREAGTALADSVRVL 185
Query: 188 EGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
+ ++L CT P+ Q + + +D+ DS+A
Sbjct: 186 YDRGATAVILGCTELPIAHASLSQEALE-LPVVDSIDSLA 224
>gi|228923509|ref|ZP_04086791.1| amino-acid racemase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|228836147|gb|EEM81506.1| amino-acid racemase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
Length = 235
Score = 45.0 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 63/165 (38%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L +EL+ S+ L V QA + +++L+T
Sbjct: 78 AQKLESTGASFIAMPCNTAH-LYFEELQ-HSLSIPILNIVDETLQAIPK-NTKRVALLAT 134
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + ++ + G +E +K ++ +
Sbjct: 135 EATIQAGIYQDGIAKRNIEYIYYEKWQTMINQIITYIKSGEV---EEARKLWSALVVQLK 191
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+ ++ACT ++ D++D+S +A+ +
Sbjct: 192 DEVA-TAIIACTDLNVVASE---------DFVDSSQCLAKAVVRM 226
>gi|56790013|dbj|BAD82810.1| monomeric aspartate racemase [Bifidobacterium bifidum]
Length = 241
Score = 45.0 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 21/164 (12%), Positives = 43/164 (26%), Gaps = 11/164 (6%)
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT---QSGLISILSTPAT 131
V+ CNTA D +S P A+ A + + L T +
Sbjct: 76 MGASFIVLTCNTAH-YFYDHFQSLTPVPILHMPRGAVAHMAGQYPKERFHRVGFLGTMGS 134
Query: 132 LRRTYTSNLIHSYVSQC-HIHLVSSMILASRVEEYACG-IKIKEDEIKKEIEGCFIEKEG 189
+ + S + + G + + ++
Sbjct: 135 RASGVYRQAVEEAGYTFVEPDDELQERITSLIYDDVKGTGDLNLQRYESVLQAMLDPAGT 194
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSP-WPVDWLDNSDSIARRARC 232
R D ++L CT ++ + P + +D +
Sbjct: 195 CRCDTLMLGCTELSVL----NEAFPLPQLPIIDAQAVLVEDTVS 234
>gi|229158366|ref|ZP_04286431.1| amino-acid racemase [Bacillus cereus ATCC 4342]
gi|228625113|gb|EEK81875.1| amino-acid racemase [Bacillus cereus ATCC 4342]
Length = 224
Score = 45.0 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 62/165 (37%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L +EL+ + ++ T+ +++L+T
Sbjct: 67 AQKLESTGVEFLAMPCNTAH-LYFEELQRSLSVPILNIVDETLQAIPENTK--RVALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + +I + + + IK + E E+ + +
Sbjct: 124 EATVQAGIYQDGI----IKRNIEYIHHEKWQESINQIISCIKGGKIEKAHELWNALVLQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT ++ D++D++ +A+ +
Sbjct: 180 RDEVDTAIIACTDLNVVASE---------DFVDSTQCLAKAVVKM 215
>gi|299770779|ref|YP_003732805.1| aspartate racemase [Acinetobacter sp. DR1]
gi|298700867|gb|ADI91432.1| aspartate racemase [Acinetobacter sp. DR1]
Length = 241
Score = 45.0 bits (105), Expect = 0.012, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 48/144 (33%), Gaps = 7/144 (4%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-GLISILST 128
IL++ I CNTA +L+ P ++Q QS + IL+T
Sbjct: 74 KILERSGVSKIAIPCNTAH-FWHSDLQQHTPIEILNMVEITVQQILKNYQSGDKVGILAT 132
Query: 129 PATLRRTYTSNLIHSYVSQCHIH--LVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
L + + + I+ V K + +E+ I
Sbjct: 133 KGALSTQLYQHELSKHDIPFVINSDEEIEQEFMPAVYAVKRNESAKAGIVFQELSQRLI- 191
Query: 187 KEGKRTDVIVLACTHYPLIVHVFR 210
+ I+LACT P+ +H +
Sbjct: 192 --DQGAGSIILACTEIPIGLHAIQ 213
>gi|296505218|ref|YP_003666918.1| aspartate racemase [Bacillus thuringiensis BMB171]
gi|296326270|gb|ADH09198.1| aspartate racemase [Bacillus thuringiensis BMB171]
Length = 224
Score = 45.0 bits (105), Expect = 0.012, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 63/165 (38%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L +EL+ S+ L V QA +++L+T
Sbjct: 67 AQKLESTGASFIAMPCNTAH-LYFEELQ-HSLSIPILNIVDETLQAIPK-NVKRVALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + + + + IK E E +++ + +
Sbjct: 124 EATVQAGIYQDGIAKRNIEY----IHYEKWQTMINQIITYIKSGEVEKARKLWSALVVQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D +++ACT ++ D++D+S +A +
Sbjct: 180 KDEVDTVIIACTDLNVVASE---------DFVDSSQCLADAVVRM 215
>gi|157163967|ref|YP_001466390.1| aspartate racemase [Campylobacter concisus 13826]
gi|112801614|gb|EAT98958.1| aspartate racemase [Campylobacter concisus 13826]
Length = 230
Score = 45.0 bits (105), Expect = 0.012, Method: Composition-based stats.
Identities = 30/237 (12%), Positives = 79/237 (33%), Gaps = 42/237 (17%)
Query: 14 NSILIFDSGIGGLI---VLQKMRFLMP----EYHFIYVADDVGFPYGNWEDHALKKRLMF 66
++ I G+G L + +K+ + P + H V D Y ++ R F
Sbjct: 2 KTLGII-GGMGPLATADLYKKIIDITPATCDQEHLHIVIDS----Y-----AQIEDRTKF 51
Query: 67 LF-------------SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSM--AFLGAVPAI 111
+ + +L ++ACNTA + + + A+
Sbjct: 52 IMGEGESPLPKLIQSAKLLKNAGCEAMLMACNTAHYFAPSIEKEAGVKILHIAKVTIDAL 111
Query: 112 KQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
++ + ++ I++++T T + ++ + + + +
Sbjct: 112 QKKYPHAKN--IAVIATSGTKKAGVYDQILKERGLKSVDFSKETQDVIMECIYK----GV 165
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
K ++++ + + DV + CT P+ + ++D + +A+
Sbjct: 166 KAGKLEEYVPVFYEVLSNIEADVYIAGCTEIPMFLPFISSEY----KFIDATFELAK 218
>gi|306480355|emb|CBV36577.1| glutamate racemase [Helicobacter pylori]
Length = 81
Score = 45.0 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 14/81 (17%), Positives = 25/81 (30%), Gaps = 8/81 (9%)
Query: 193 DVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLPRINTHQTRVFD 246
+V++L CTH+PLI H + + D+I + F
Sbjct: 1 EVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFP 58
Query: 247 DHALFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 RVEFHASGDVIWLEKQAKEWL 79
>gi|310287122|ref|YP_003938380.1| aspartate racemase [Bifidobacterium bifidum S17]
gi|309251058|gb|ADO52806.1| aspartate racemase [Bifidobacterium bifidum S17]
Length = 241
Score = 45.0 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 21/165 (12%), Positives = 43/165 (26%), Gaps = 11/165 (6%)
Query: 75 YQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYT---QSGLISILSTPAT 131
V+ CNTA D +S P A+ A + + L T +
Sbjct: 76 MGASFIVLTCNTAH-YFYDHFQSLTPVPILHMPRGAVAHMAGQYPKERFHRVGFLGTMGS 134
Query: 132 LRRTYTSNLIHSYVSQC-HIHLVSSMILASRVEEYACG-IKIKEDEIKKEIEGCFIEKEG 189
+ + S + + G + + ++
Sbjct: 135 RASGVYRQAVEEAGYTFVEPDDELQERITSLIYDDVKGTGDLNLQRYESVLQSMLDPAGT 194
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSP-WPVDWLDNSDSIARRARCL 233
R D ++L CT ++ + P + +D +
Sbjct: 195 CRCDTLMLGCTELSVL----NEAFPLPQLPIIDAQAVLVEDTVSR 235
>gi|213864776|ref|ZP_03386895.1| aspartate racemase [Salmonella enterica subsp. enterica serovar
Typhi str. M223]
Length = 172
Score = 44.6 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 55/175 (31%), Gaps = 7/175 (4%)
Query: 76 QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRT 135
VI CNTA D+L++ + + + A + + + +L+T ATL
Sbjct: 3 GAECIVIPCNTAH-YWFDDLQNVAKA-RMISILDATLGDIPPS-ARHVGLLATNATLATG 59
Query: 136 YTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVI 195
+ + L + + + + + I
Sbjct: 60 LYQKKALARGLTLIQPEDAGQALVMQAIYTLKRG--DKTAAQALLLPQIDSLIARGAQAI 117
Query: 196 VLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHAL 250
++ CT PLIV + +D++ S+ R A + + + L
Sbjct: 118 IMGCTEIPLIVAGHERAI--ACPMIDSTASLVRAAIRWYESWPDTRASLTGEQRL 170
>gi|19075929|ref|NP_588429.1| hydantoin racemase family (predicted) [Schizosaccharomyces pombe
972h-]
gi|74582589|sp|O74886|YQE2_SCHPO RecName: Full=Uncharacterized protein C576.02
gi|3687457|emb|CAA21181.1| hydantoin racemase family (predicted) [Schizosaccharomyces pombe]
Length = 236
Score = 44.6 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 30/190 (15%), Positives = 57/190 (30%), Gaps = 12/190 (6%)
Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA 115
+ L L+F +AC + L+ D +R +F ++ +G V A +A
Sbjct: 50 TEATLTAALVFQALTPSVLDGVDAIAVACYSPTPLV-DMIRESF-ALPCMGIVQASVLSA 107
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYV--SQCHIHLVSSMILASRVEEYACGIKIKE 173
+ + ST R + S+ + ++S +
Sbjct: 108 LSVGQRIGILTST---YRSECLLYELLDSFGVSRTRVAAIASTGRTVL----QLSQMPSQ 160
Query: 174 DEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+ ++ K DVI L I + + +D A
Sbjct: 161 ERETLLVQKAQELANTKGADVICLGGAALAAIRDQIQVAVGPNIPIID-GVHAAVELLAG 219
Query: 234 LPRINTHQTR 243
L R N H ++
Sbjct: 220 LARQNLHTSK 229
>gi|19115408|ref|NP_594496.1| hydantoin racemase family (predicted) [Schizosaccharomyces pombe
972h-]
gi|1351671|sp|Q09921|YAKA_SCHPO RecName: Full=Uncharacterized protein C1F7.10
gi|1067212|emb|CAA91957.1| hydantoin racemase family (predicted) [Schizosaccharomyces pombe]
Length = 238
Score = 44.6 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 28/197 (14%), Positives = 59/197 (29%), Gaps = 14/197 (7%)
Query: 53 GNWEDHALKK--RLMFLFSDILDKY--QPVLSVIACNTAFTLIKDELRSTFPSMAFLGAV 108
G + R + + + Q +++C + L+ LR T+
Sbjct: 42 GPKAIECVSDGVRSAAVLMKYFEDHPPQVDAFLVSCYSDHPLVT-TLRETYRKPCTGIMQ 100
Query: 109 PAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHL-VSSMILASRVEEYAC 167
+I A + + + T ++ IH+ + ++S LA
Sbjct: 101 ASILTALSLGRKVSV---VTTTKRYEPLLTDGIHAMGISDSVFAGIASTGLAPL----EL 153
Query: 168 GIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIA 227
K + + DVI L C + HV + + +D + +
Sbjct: 154 DSKPRAEVDALLARTALRAVNEMGADVICLGCAGMTHMAHVLEKAVGPNIPIIDGTKAGV 213
Query: 228 RRARCLLPRINTHQTRV 244
L R+N ++
Sbjct: 214 ELLAS-LVRMNLFTSKQ 229
>gi|293573127|ref|ZP_06684065.1| putative glutamate racemase [Enterococcus faecium E980]
gi|291606796|gb|EFF36180.1| putative glutamate racemase [Enterococcus faecium E980]
Length = 216
Score = 44.6 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 24/171 (14%), Positives = 61/171 (35%), Gaps = 10/171 (5%)
Query: 65 MFLFSDILDKYQPVLSVIACNTAFT-LIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
+ + L + L ++ CN+ + D L + P A + I
Sbjct: 55 IEVKIKDLQSKKIDLLLVYCNSLSASIDFDFLAKKYSMKI---ITPFQVYADLAQKHERI 111
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L T +++ + S ++ V+++ VE I E +
Sbjct: 112 GVL-TANGQGAAGIESVLVQHHSTIRVYNVTNLDWVHAVEAKIHPSIIVEQF---GLTDS 167
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ + I++ CTH+P + ++ + + ++ D++ + + +L
Sbjct: 168 MSFFMKNQVEAILIGCTHFPYFLTEYQSRT--RIPCINPDDALIEKVKSIL 216
>gi|257885954|ref|ZP_05665607.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
gi|257821810|gb|EEV48940.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
Length = 213
Score = 44.6 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 24/171 (14%), Positives = 61/171 (35%), Gaps = 10/171 (5%)
Query: 65 MFLFSDILDKYQPVLSVIACNTAFT-LIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
+ + L + L ++ CN+ + D L + P A + I
Sbjct: 52 IEVKIKDLQSKKIDLLLVYCNSLSASIDFDFLAKKYSMKI---ITPFQVYADLAQKHERI 108
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L T +++ + S ++ V+++ VE I E +
Sbjct: 109 GVL-TANGQGAAGIESVLVQHHSTIRVYNVTNLDWVHAVEAKIHPSIIVEQF---GLTDS 164
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ + I++ CTH+P + ++ + + ++ D++ + + +L
Sbjct: 165 MSFFMKNQVEAILIGCTHFPYFLTEYQSRT--RIPCINPDDALIEKVKSIL 213
>gi|257897472|ref|ZP_05677125.1| conserved hypothetical protein [Enterococcus faecium Com12]
gi|257834037|gb|EEV60458.1| conserved hypothetical protein [Enterococcus faecium Com12]
Length = 213
Score = 44.6 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 24/171 (14%), Positives = 61/171 (35%), Gaps = 10/171 (5%)
Query: 65 MFLFSDILDKYQPVLSVIACNTAFT-LIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
+ + L + L ++ CN+ + D L + P A + I
Sbjct: 52 IEVKIKDLQSKKIDLLLVYCNSLSASIDFDFLAKKYSMKI---ITPFQVYADLAQKHERI 108
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L T +++ + S ++ V+++ VE I E +
Sbjct: 109 GVL-TANGQGAAGIESVLVQHHSTIRVYNVTNLDWVHAVEAKIHPSIIVEQF---GLTDS 164
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ + I++ CTH+P + ++ + + ++ D++ + + +L
Sbjct: 165 MSFFMKNQVEAILIGCTHFPYFLTEYQSRT--RIPCINPDDALIEKVKSIL 213
>gi|227550146|ref|ZP_03980195.1| glutamate racemase [Enterococcus faecium TX1330]
gi|227180713|gb|EEI61685.1| glutamate racemase [Enterococcus faecium TX1330]
Length = 219
Score = 44.6 bits (104), Expect = 0.016, Method: Composition-based stats.
Identities = 24/171 (14%), Positives = 61/171 (35%), Gaps = 10/171 (5%)
Query: 65 MFLFSDILDKYQPVLSVIACNTAFT-LIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
+ + L + L ++ CN+ + D L + P A + I
Sbjct: 58 IEVKIKDLQSKKIDLLLVYCNSLSASIDFDFLAKKYSMKI---ITPFQVYADLAQKHERI 114
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L T +++ + S ++ V+++ VE I E +
Sbjct: 115 GVL-TANGQGAAGIESVLVQHHSTIRVYNVTNLDWVHAVEAKIHPSIIVEQF---GLTDS 170
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ + I++ CTH+P + ++ + + ++ D++ + + +L
Sbjct: 171 MSFFMKNQVEAILIGCTHFPYFLTEYQSRT--RIPCINPDDALIEKVKSIL 219
>gi|320332988|ref|YP_004169699.1| aspartate racemase [Deinococcus maricopensis DSM 21211]
gi|319754277|gb|ADV66034.1| aspartate racemase [Deinococcus maricopensis DSM 21211]
Length = 243
Score = 44.6 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 26/185 (14%), Positives = 55/185 (29%), Gaps = 9/185 (4%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA--AYTQSG 121
+ + L+ V+ CNTA D + F+ + A A +
Sbjct: 63 ALAGMARGLEAAGADFLVMVCNTAHAYQADI--EAAVRVPFVSLIDETVHATLRAVPGAR 120
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ +L+T L + + + V ++ ++
Sbjct: 121 AVGLLATTTCLDAGLYQRAFAPHGVRMIEPDAAGRARFMEVLYRIKAGD-TGAAVRADMR 179
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D +V CT PL++ + PV + ++D + R +
Sbjct: 180 ALGLALADAGADALVAGCTEVPLVLG----AADVPVPLISSTDVLVERTVQYARGLAPLP 235
Query: 242 TRVFD 246
TR +
Sbjct: 236 TRSTE 240
>gi|306480476|emb|CBV36694.1| glutamate racemase [Helicobacter pylori]
Length = 93
Score = 44.6 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 25/92 (27%), Gaps = 8/92 (8%)
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLP 235
+ V++L CTH+PLI H + + D+I +
Sbjct: 2 RYYFTPLEILPKVVILGCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--K 59
Query: 236 RINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
F SG ++ +
Sbjct: 60 YALKKNACAFPRIEFHASGDVIWLEKQAKEWL 91
>gi|320176403|gb|EFW51457.1| Aspartate racemase [Shigella dysenteriae CDC 74-1112]
Length = 145
Score = 44.2 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 19/143 (13%), Positives = 43/143 (30%), Gaps = 5/143 (3%)
Query: 89 TLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTS-NLIHSYVSQ 147
+ + ++ FL A +A +++L T T+ + + L +
Sbjct: 1 MHKVADAIESRCTLPFLHIADATGRAITGAGMTRVALLGTRYTMEQDFYRGRLTEQFSIN 60
Query: 148 CHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVH 207
C I +++ + + + + ++ CT L+V
Sbjct: 61 CLIPEADERAKINQIIFEELCLGQFTEASRAYYAQVIARLAEQGAQGVIFGCTEIGLLVP 120
Query: 208 VFRQLSPWPVDWLDNSDSIARRA 230
R + P D + A A
Sbjct: 121 EERSVLP----VFDTAAIHAEDA 139
>gi|152977116|ref|YP_001376633.1| aspartate racemase [Bacillus cereus subsp. cytotoxis NVH 391-98]
gi|152025868|gb|ABS23638.1| aspartate racemase [Bacillus cytotoxicus NVH 391-98]
Length = 238
Score = 44.2 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 27/182 (14%), Positives = 61/182 (33%), Gaps = 12/182 (6%)
Query: 52 YGNWEDH-ALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA 110
Y + K+ + + L+ + CNTA L +E+++
Sbjct: 57 YIDKPIDHEAMKQAIVTGAQRLENIGVDFIAMPCNTAH-LYFNEIQNAVALPLLNIIDET 115
Query: 111 IKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
+K+ +++L+T AT++ N I + + G
Sbjct: 116 LKE--LPNHIHKVTLLATNATVQSRIYQNEITKLGIEYIHKESWQKDTIQIISSIKKGHL 173
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
K +E+ + E D ++ACT ++ + + ++D+S +A+
Sbjct: 174 HKANELWNTLSIELAE----TVDAAIIACTDLNVVTNS----ETGSLYFVDSSVCLAKAV 225
Query: 231 RC 232
Sbjct: 226 VH 227
>gi|306480292|emb|CBV36518.1| glutamate racemase [Helicobacter pylori]
Length = 78
Score = 44.2 bits (103), Expect = 0.020, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 22/78 (28%), Gaps = 8/78 (10%)
Query: 196 VLACTHYPLIVHVFRQLSPWPVDW------LDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+L CTH+PLI H + + D+I + F
Sbjct: 1 ILGCTHFPLIAHQIEGYFMGHFALSTPPLLIHSGDAIVEYLQQ--KYTLKKNAHAFPKVE 58
Query: 250 LFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 FHASGDVIWLEKQAKEWL 76
>gi|19910920|dbj|BAB87711.1| glutamate racemase [Helicobacter pylori]
gi|19910922|dbj|BAB87712.1| glutamate racemase [Helicobacter pylori]
Length = 75
Score = 44.2 bits (103), Expect = 0.020, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 21/76 (27%), Gaps = 9/76 (11%)
Query: 198 ACTHYPLIVHVFRQLSPWPVDW------LDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
CTH+PLI H + + D+I + + F
Sbjct: 1 GCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQ---QKYALKNACAFPKVEFH 57
Query: 252 LSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 58 ASGDVVWLEKQAKEWL 73
>gi|6007556|gb|AAF00963.1|AF183408_11 McyF [Microcystis aeruginosa PCC 7806]
gi|159029571|emb|CAO90230.1| mcyF [Microcystis aeruginosa PCC 7806]
Length = 251
Score = 44.2 bits (103), Expect = 0.021, Method: Composition-based stats.
Identities = 22/180 (12%), Positives = 55/180 (30%), Gaps = 12/180 (6%)
Query: 61 KKRLMFL-FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119
++ + F+ + VI C TA + P + IK A Q
Sbjct: 63 REFIDFIQVNLEHLNKLADCIVIGCCTAHYALPQI-----PENLKDKLISLIKIADQELQ 117
Query: 120 --SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
+ +L++ T ++ + + ++ + + ++
Sbjct: 118 EYNEPTLLLASTGTYQKKLFQEGCTTADLIISLSESDQKLIHEMIYKVLKRGHDPLSILR 177
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237
IE + + + CT + L+ + + +D +IA+ L+ +
Sbjct: 178 D-IEALLEKYNTRSY---ISGCTEFHLLTKSLKLKGIDSIKAIDPLSTIAQNFSQLIIKQ 233
>gi|229147323|ref|ZP_04275673.1| amino-acid racemase [Bacillus cereus BDRD-ST24]
gi|228636155|gb|EEK92635.1| amino-acid racemase [Bacillus cereus BDRD-ST24]
Length = 225
Score = 44.2 bits (103), Expect = 0.021, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 61/165 (36%), Gaps = 15/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L +EL+ + ++ T+ +++L+T
Sbjct: 67 AQKLESTGASFIAMPCNTAH-LYFEELQRSLSIPILNIVDETLQSIPENTK--RVALLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + + + + IK E E +++ + +
Sbjct: 124 EATVQAGIYQDGIAKRNIEY----IHYEKWQTMINQIITYIKSGEVENARKLWSALVVQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT + +++D+S +A+ +
Sbjct: 180 KDEVDTAIIACTDLN--------VVAASENFVDSSQCLAKAVVRM 216
>gi|306480050|emb|CBV36284.1| glutamate racemase [Helicobacter pylori]
Length = 78
Score = 44.2 bits (103), Expect = 0.022, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 21/78 (26%), Gaps = 8/78 (10%)
Query: 196 VLACTHYPLIVHVFRQLSPWPVDW------LDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+L CTH+PLI + + D+I + F
Sbjct: 1 ILGCTHFPLIAQKIEGYFMDHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFPKVE 58
Query: 250 LFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 FHASGDVVWLEKQAKEWL 76
>gi|306479789|emb|CBV36033.1| glutamate racemase [Helicobacter pylori]
Length = 78
Score = 44.2 bits (103), Expect = 0.022, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 24/78 (30%), Gaps = 8/78 (10%)
Query: 196 VLACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHA 249
+L CTH+PLI P P + + D+I + + F
Sbjct: 1 ILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVEYLQQ--KYTLKNNACAFPKVE 58
Query: 250 LFLSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 FHASGDVIWLEKQAKEWL 76
>gi|228910604|ref|ZP_04074416.1| amino-acid racemase [Bacillus thuringiensis IBL 200]
gi|228849019|gb|EEM93861.1| amino-acid racemase [Bacillus thuringiensis IBL 200]
Length = 224
Score = 43.8 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 60/165 (36%), Gaps = 16/165 (9%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ + CNTA L +EL S+ L V Q +++L+T
Sbjct: 67 AQKLESTGVEFIAMPCNTAH-LYFEEL-QHSLSIPILNIVDETLQTIPE-NIKRVTLLAT 123
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
AT++ + I + + + + + IK E E +++ + +
Sbjct: 124 EATIQAGIYQDGIAKRNIEY----IHNEQWQESINQIITCIKGGEIEEARKLWSVLVVQL 179
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
D ++ACT ++ D++D++ +A +
Sbjct: 180 KAEVDTAIIACTDLNVVADE---------DFVDSAQCLADAVVEM 215
>gi|297844444|ref|XP_002890103.1| aspartate-glutamate racemase family [Arabidopsis lyrata subsp.
lyrata]
gi|297335945|gb|EFH66362.1| aspartate-glutamate racemase family [Arabidopsis lyrata subsp.
lyrata]
Length = 330
Score = 43.8 bits (102), Expect = 0.026, Method: Composition-based stats.
Identities = 25/173 (14%), Positives = 58/173 (33%), Gaps = 22/173 (12%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL------- 122
L+K L ++ C+ A + +E+ S+ L I + +
Sbjct: 159 RYLEKCGAKLILMPCHIAH-IWYEEVCEG-SSVPLLHMGECIAKELQEAKMKPLEAGNPL 216
Query: 123 -ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ +++T ATL + + S + + ++M + + + + + +
Sbjct: 217 RVGVMATSATLSAGFYQEKLQSNGFEAVLPDKATME-HTVIPSIEAMKREDMEGARNLLR 275
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP----VDWLDNSDSIARRA 230
+ +V++L R L P +D D++AR A
Sbjct: 276 IALQVLLVQAVNVVMLGS-------DEMRDLLPGDDPLLKKCVDPMDALARSA 321
>gi|306480112|emb|CBV36344.1| glutamate racemase [Helicobacter pylori]
Length = 93
Score = 43.8 bits (102), Expect = 0.027, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 25/92 (27%), Gaps = 8/92 (8%)
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLP 235
+ +V++L CTH+PLI + + D+I +
Sbjct: 2 RYYFTPLEILPEVVILGCTHFPLIAQKIEGYFMDHFALSTPPLLIHSGDAIVEYLQQ--K 59
Query: 236 RINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
F SG ++ +
Sbjct: 60 YALKKNACAFPKVEFHASGDVIWLEKQAKEWI 91
>gi|317495332|ref|ZP_07953702.1| hypothetical protein HMPREF0432_00304 [Gemella moribillum M424]
gi|316914754|gb|EFV36230.1| hypothetical protein HMPREF0432_00304 [Gemella moribillum M424]
Length = 215
Score = 43.8 bits (102), Expect = 0.028, Method: Composition-based stats.
Identities = 24/171 (14%), Positives = 61/171 (35%), Gaps = 9/171 (5%)
Query: 62 KRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
++ + + I ++ + V + + + D L P +
Sbjct: 53 DIIVEIINKIKEQQCSAIFVYCNSLSSVVDFDRL---AIENEINIITPMQMYRNLGLEYK 109
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++++ + +NL S + + +S + L +E+ KI D K +
Sbjct: 110 YLAVMAANSHGLTGVENNLYLS-NPELKVFGLSMLELVKAIEDKNSPHKIVADFDFKNLF 168
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232
F + + + +VL CTH+P I +++ + +D + +
Sbjct: 169 NYFEQ---TKVEAVVLGCTHFPYIKEELEKIT--KLSIIDVGIFMIESLKS 214
>gi|297743412|emb|CBI36279.3| unnamed protein product [Vitis vinifera]
Length = 443
Score = 43.4 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 21/168 (12%), Positives = 55/168 (32%), Gaps = 14/168 (8%)
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--------SGL 122
L++ V+ C+ + + + S S+ FL + + +
Sbjct: 269 FLERSGVQCIVMPCHISHS--WHDEISRGSSVPFLHMGECVARELKNAKLKPLEAGSPLR 326
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I +L+T ATL + + + + ++M + + + + + +
Sbjct: 327 IGVLATNATLTAGFYQEKLQREGFEVVLPDKATME-HTVIPAIEAFNRKDMEGARNLLRI 385
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ + ++LA ++ L +D D++AR
Sbjct: 386 ALQVLLVRAVNTVILASDDMHDLLPRDDPLL---KKCVDPMDALARST 430
>gi|225442873|ref|XP_002281753.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 305
Score = 43.4 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 21/168 (12%), Positives = 55/168 (32%), Gaps = 14/168 (8%)
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--------SGL 122
L++ V+ C+ + + + S S+ FL + + +
Sbjct: 131 FLERSGVQCIVMPCHISHS--WHDEISRGSSVPFLHMGECVARELKNAKLKPLEAGSPLR 188
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I +L+T ATL + + + + ++M + + + + + +
Sbjct: 189 IGVLATNATLTAGFYQEKLQREGFEVVLPDKATME-HTVIPAIEAFNRKDMEGARNLLRI 247
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ + ++LA ++ L +D D++AR
Sbjct: 248 ALQVLLVRAVNTVILASDDMHDLLPRDDPLL---KKCVDPMDALARST 292
>gi|306479849|emb|CBV36091.1| glutamate racemase [Helicobacter pylori]
Length = 93
Score = 43.4 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 25/92 (27%), Gaps = 8/92 (8%)
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVD------WLDNSDSIARRARCLLP 235
+ +VI+L CTH+PLI + + D+I +
Sbjct: 2 RYYFTPLEILPEVIILGCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVGYLQQ--K 59
Query: 236 RINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
F SG ++ +
Sbjct: 60 YALKKNACTFPKVEFHASGDVIWLEKQAKEWL 91
>gi|307944396|ref|ZP_07659737.1| hypothetical protein TRICHSKD4_3058 [Roseibium sp. TrichSKD4]
gi|307772742|gb|EFO31962.1| hypothetical protein TRICHSKD4_3058 [Roseibium sp. TrichSKD4]
Length = 973
Score = 43.4 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 11/95 (11%)
Query: 7 PCEKKLQN------SILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL 60
P EKK + ++ DSGIGG M + E H V P G+ + +
Sbjct: 24 PAEKKSRPGYQNLGTVGFVDSGIGG-----AMAAGLVEGHVREFGSQVALPIGDKHPNQI 78
Query: 61 KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDEL 95
+ + + L ++IACNTA + +
Sbjct: 79 ETFTAQMVAQSLIVDGHEYAIIACNTASCKKEKAV 113
>gi|257468637|ref|ZP_05632731.1| aspartate racemase [Fusobacterium ulcerans ATCC 49185]
gi|317062894|ref|ZP_07927379.1| aspartate racemase [Fusobacterium ulcerans ATCC 49185]
gi|313688570|gb|EFS25405.1| aspartate racemase [Fusobacterium ulcerans ATCC 49185]
Length = 235
Score = 43.4 bits (101), Expect = 0.037, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 51/177 (28%), Gaps = 11/177 (6%)
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-GLISI 125
++ L K +I NTA DE+ S A+K+ + +
Sbjct: 67 ATAENLKKAGADFIIIGANTAH-YFYDEVASQVDIPFLHIIDEAVKEMMRQVPGIKKVGV 125
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
++T A ++ + + + E +K + C
Sbjct: 126 MATNAAVKIKLYDKCCAKFGIEVIAAKEEVQNKVHDTIFDFKYNGVTEKNVKDATD-CAE 184
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWP--VDWLDNSDSIARRARCLLPRINTH 240
+ +++ CT P+I+ V +D +D I + A
Sbjct: 185 YFIENGAEALIMGCTEIPIILK------GKSFTVPLIDPNDIIGKVAVAYAKNKYEL 235
>gi|147819141|emb|CAN68957.1| hypothetical protein VITISV_015733 [Vitis vinifera]
Length = 330
Score = 43.4 bits (101), Expect = 0.037, Method: Composition-based stats.
Identities = 21/168 (12%), Positives = 55/168 (32%), Gaps = 14/168 (8%)
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ--------SGL 122
L++ V+ C+ + + + S S+ FL + + +
Sbjct: 158 FLERSGVQCIVMPCHISHS--WHDEISRGXSVPFLHMGECVARELKNAKLKPLEAGSPLR 215
Query: 123 ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEG 182
I +L+T ATL + + + + ++M + + + + + +
Sbjct: 216 IGVLATNATLTAGFYQEKLQREGFEVVLPDKATME-HTVIPAIEALNRKDMEGARNLLRI 274
Query: 183 CFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ + ++LA ++ L +D D++AR
Sbjct: 275 ALQVLLVRAVNTVILASDDMHDLLPRDDPLL---KKCVDPMDALARST 319
>gi|253582891|ref|ZP_04860109.1| aspartate racemase subfamily protein [Fusobacterium varium ATCC
27725]
gi|251835097|gb|EES63640.1| aspartate racemase subfamily protein [Fusobacterium varium ATCC
27725]
Length = 235
Score = 43.0 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 11/170 (6%)
Query: 67 LFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQS-GLISI 125
++ L K +I NTA DE+ S A+K+ + +
Sbjct: 67 ATAENLKKAGADFIIIGANTAH-YFYDEVASQVDIPFLHIIEEAVKEMMRQVPGIKKVGV 125
Query: 126 LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFI 185
++T A ++ + + + E +K + C
Sbjct: 126 MATNAAVKIKLYDKCCAKFGIEVIAAKEDVQNKVHDTIFDFKYNGVTEKNVKDATD-CAE 184
Query: 186 EKEGKRTDVIVLACTHYPLIVHVFRQLSPWP--VDWLDNSDSIARRARCL 233
+ +++ CT P+I+ V +D +D I + A
Sbjct: 185 YFIENGAEALIMGCTEIPIILK------GKSFTVPLIDPNDIIGKVAVAY 228
>gi|19910916|dbj|BAB87709.1| glutamate racemase [Helicobacter pylori]
Length = 78
Score = 43.0 bits (100), Expect = 0.043, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 19/76 (25%), Gaps = 8/76 (10%)
Query: 198 ACTHYPLIVHVFRQLSPWPVDW------LDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
CTH+PLI + + D+I + F
Sbjct: 3 GCTHFPLIAQKIESYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNAHAFPKVEFH 60
Query: 252 LSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 61 ASGDVVWLEKQAKEWL 76
>gi|15218160|ref|NP_172993.1| aspartate-glutamate racemase family [Arabidopsis thaliana]
gi|5103839|gb|AAD39669.1|AC007591_34 Is a member of the PF|01177 Aspartate-glutamate racemase family.
EST gb|T43554 comes from this gene [Arabidopsis
thaliana]
gi|26983862|gb|AAN86183.1| unknown protein [Arabidopsis thaliana]
gi|332191198|gb|AEE29319.1| aspartate-glutamate racemase-like protein [Arabidopsis thaliana]
Length = 330
Score = 42.7 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 23/173 (13%), Positives = 57/173 (32%), Gaps = 22/173 (12%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL------- 122
L++ L ++ C+ A + +E+ + L I + +
Sbjct: 159 RYLERCGAKLILMPCHIAH-IWYEEVCEG-SLVPLLHMGECIAKELQEAKMKPLEAGNPL 216
Query: 123 -ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ +++T ATL + + S + + ++M + + + + + +
Sbjct: 217 RVGVMATSATLSAGFYQEKLQSNGFEAVLPDKATME-HTVIPSIEAMKRKDMEGARNLLR 275
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP----VDWLDNSDSIARRA 230
+ +V++L R L P +D D++AR A
Sbjct: 276 IALQVLLVQAVNVVMLGS-------DEMRDLLPGDDPLLKKCVDPMDALARSA 321
>gi|19910930|dbj|BAB87718.1| glutamate racemase [Helicobacter pylori]
Length = 76
Score = 42.7 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 20/76 (26%), Gaps = 8/76 (10%)
Query: 198 ACTHYPLIVHVFRQLSPWPVDW------LDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
CTH+PLI + + D+I + + F
Sbjct: 1 GCTHFPLIAQKIESCFMEHFALSTPPLLIHSGDAIVKYLQQ--KYALKKNACAFPKVEFH 58
Query: 252 LSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 ASGDVVWLEKQAKEWL 74
>gi|110740155|dbj|BAF01976.1| hypothetical protein [Arabidopsis thaliana]
Length = 330
Score = 42.7 bits (99), Expect = 0.052, Method: Composition-based stats.
Identities = 22/173 (12%), Positives = 56/173 (32%), Gaps = 22/173 (12%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGL------- 122
L++ L ++ C+ A + +E+ + L I + +
Sbjct: 159 RYLERCGAKLILMPCHIAH-IWYEEVCEG-SLVPLLHMGECIAKELQEAKMKPLEAGNPL 216
Query: 123 -ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+ +++T ATL + + S + + + + + + + + + +
Sbjct: 217 RVGVMATSATLSAGFYQEKLQSNGFEA-VPPDKATMEHTVIPSIEAMKRKDMEGARNLLR 275
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP----VDWLDNSDSIARRA 230
+ +V++L R L P +D D++AR A
Sbjct: 276 IALQVLLVQAVNVVMLGS-------DEMRDLLPGDDPLLKKCVDPMDALARSA 321
>gi|10567583|gb|AAG18488.1| glutamate racemase [Helicobacter pylori]
Length = 76
Score = 42.7 bits (99), Expect = 0.063, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 21/76 (27%), Gaps = 8/76 (10%)
Query: 198 ACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
CTH+PLI P P + + D+I + F
Sbjct: 1 GCTHFPLIAQKIESYFMDHFALPTPPLLIHSGDAIVEYLQQ--KYTLKKNACAFPKVEFH 58
Query: 252 LSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 ASGDVVWLEKQAKEWL 74
>gi|145629156|ref|ZP_01784955.1| glutamate racemase [Haemophilus influenzae 22.1-21]
gi|144978659|gb|EDJ88382.1| glutamate racemase [Haemophilus influenzae 22.1-21]
Length = 60
Score = 42.3 bits (98), Expect = 0.066, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 221 DNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDI-AMRRLMQGFGLKS 271
D S +IA+R + LL N + + P+ ++ + +G +S
Sbjct: 2 DPSAAIAKRIKYLLDDKNLQVQNEKYNQMFCTAHFPEESQFKKALHLWGFES 53
>gi|9955393|dbj|BAB12212.1| racemase [Microcystis aeruginosa]
Length = 251
Score = 42.3 bits (98), Expect = 0.067, Method: Composition-based stats.
Identities = 22/180 (12%), Positives = 57/180 (31%), Gaps = 12/180 (6%)
Query: 61 KKRLMFL-FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119
++ + F+ + VI C TA L ++ + IK A Q
Sbjct: 63 REFIDFIQVNLEHLNKLADCIVIGCCTAH----YALPQISENL-KDKLISLIKIADQELQ 117
Query: 120 --SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
+ +L++ T ++ + + ++ + + + ++
Sbjct: 118 EYNKPTLLLASTGTYQKKLFHEGCTTADLIISLSESDQKLIHEMIYKVLKRGQDPLSILR 177
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237
IE + + + CT + L+ + + +D +IA+ L+ +
Sbjct: 178 D-IEALLEKYNSRSY---ISGCTEFHLLTKSLKLKGIDSIKAIDPLSTIAQNFSQLIIKQ 233
>gi|213409287|ref|XP_002175414.1| hydantoin racemase [Schizosaccharomyces japonicus yFS275]
gi|212003461|gb|EEB09121.1| hydantoin racemase [Schizosaccharomyces japonicus yFS275]
Length = 236
Score = 42.3 bits (98), Expect = 0.070, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 53/167 (31%), Gaps = 8/167 (4%)
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
V+AC + L+ + +R +F +I+ A + I IL+T T R
Sbjct: 72 DAIVVACYSPTPLV-EMIRESFDVPCLGIVQASIQSA--MSVGRRIGILTT--TKRSELM 126
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
+ ++ + VE+ +E+ I + DV+ L
Sbjct: 127 LYELLKHLGISRTIIAGIQSSGLTVEQ--LATLPEEERISLLVSKARKLVLDLNADVVCL 184
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
+ + ++ + +D S + L R ++
Sbjct: 185 GGAVLASLRDLIQEAIGPNIVIVDGVRSAVEQLAT-LVRQGIRTSKG 230
>gi|166366603|ref|YP_001658876.1| McyF protein [Microcystis aeruginosa NIES-843]
gi|166088976|dbj|BAG03684.1| McyF protein [Microcystis aeruginosa NIES-843]
Length = 251
Score = 42.3 bits (98), Expect = 0.070, Method: Composition-based stats.
Identities = 22/180 (12%), Positives = 56/180 (31%), Gaps = 12/180 (6%)
Query: 61 KKRLMFL-FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQ 119
++ + F+ + VI C TA L ++ + IK A Q
Sbjct: 63 REFIDFIQVNLEHLNKLADCIVIGCCTAH----YALPQISENL-KDKLLSLIKIADQELQ 117
Query: 120 --SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
+ +L++ T ++ + + ++ + + ++
Sbjct: 118 EYNEPTLLLASTGTYQKKLFQEGCTTADLIISLSESDQKLIHEMIYKVLKRGHDPLSILR 177
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237
IE + + + CT + L+ + + +D +IA+ L+ +
Sbjct: 178 D-IEALLEKYNTRSY---ISGCTEFHLLTKSLKLKGIDSIKAIDPLSTIAQNFSQLIIKQ 233
>gi|309807430|ref|ZP_07701393.1| glutamate racemase family protein [Lactobacillus iners LactinV
01V1-a]
gi|308169352|gb|EFO71407.1| glutamate racemase family protein [Lactobacillus iners LactinV
01V1-a]
Length = 78
Score = 42.3 bits (98), Expect = 0.082, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 23/61 (37%)
Query: 103 AFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRV 162
A+ TQ+ +++++T AT+ I +Q + + LA V
Sbjct: 3 IIGVIQSGALAASKITQTNQVAVIATNATVNSHSYVKEIAFRNAQIQVTELGEPKLAPLV 62
Query: 163 E 163
E
Sbjct: 63 E 63
>gi|319795600|ref|YP_004157240.1| peptidoglycan-binding lysin domain [Variovorax paradoxus EPS]
gi|315598063|gb|ADU39129.1| Peptidoglycan-binding lysin domain [Variovorax paradoxus EPS]
Length = 6514
Score = 41.9 bits (97), Expect = 0.10, Method: Composition-based stats.
Identities = 35/239 (14%), Positives = 73/239 (30%), Gaps = 25/239 (10%)
Query: 7 PCEKKLQNSILIFDSGIGGLIVLQKMRF----LMPE-YHFIYVADDVGFPYGNWED---- 57
P + ++ + +FDSG GG++ +++ + + D YG
Sbjct: 4618 PDLRGVRLRLGVFDSGNGGILAAAEIKRGVEERTGARVDLVIIGDHGAGTYGELGRVGGV 4677
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
A+ R + D L V+ CNTA T D+ + + + + + ++
Sbjct: 4678 TAIADRTNGGL-QVGDALGIHLMVMGCNTACTSGLDQY-ARGIGVPVVDLILSTREFHKG 4735
Query: 118 TQSGLISILS--TPATLRRTYTSNLIHSYVSQCHIHLVSSM----ILASRVEEYACGIKI 171
+++ T T + + V LA V +
Sbjct: 4736 LVDAGERVVAFSTEPTATLPLPGTNLIGVYRDNEVLPVGGTDAGFDLAGIVNVFLADPMN 4795
Query: 172 K--EDEIKKEIEGCFIEKEGKRTD--VIVLACTHYP----LIVHVFRQLSPWPVDWLDN 222
+ ++ + + + D + CTHYP Q V ++
Sbjct: 4796 PALQQRMQDAADHYADKILAAKPDVTTVSWCCTHYPELERFFAKSLAQRGRSDVKMVNP 4854
>gi|319901947|ref|YP_004161675.1| aspartate racemase [Bacteroides helcogenes P 36-108]
gi|319416978|gb|ADV44089.1| aspartate racemase [Bacteroides helcogenes P 36-108]
Length = 239
Score = 41.9 bits (97), Expect = 0.10, Method: Composition-based stats.
Identities = 30/183 (16%), Positives = 56/183 (30%), Gaps = 19/183 (10%)
Query: 55 WEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQA 114
+ + + L K + CNTA DEL S + F+ + + +
Sbjct: 56 KGESFISDYV--NIGKKLKKMGCTELCMCCNTAH-YAIDEL-SQKTDLPFINIIDEVARR 111
Query: 115 AAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174
+ ++ T + Y S + + + V + C K
Sbjct: 112 SDEMGIKKALVMCTAGLRKYKLYERSFEKYASSTEVV-YPNDEIQEWVTKGICNAKNIYR 170
Query: 175 EIKKEIE-----GCFIEKEG-----KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSD 224
+E E F + D I+ CT QL+ V+++D+ D
Sbjct: 171 FANRETEVEHPANWFQKVCDYYINTSDIDCIIGGCTDIS----NVFQLNSSKVEYIDSLD 226
Query: 225 SIA 227
+A
Sbjct: 227 VLA 229
>gi|19910926|dbj|BAB87715.1| glutamate racemase [Helicobacter pylori]
Length = 76
Score = 41.5 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 19/76 (25%), Gaps = 8/76 (10%)
Query: 198 ACTHYPLIVHVFRQLSPWPVDW------LDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
CTH+PLI H + + D+I F
Sbjct: 1 GCTHFPLIAHQIESYFMEHFALSTPPLLIHSGDAIVEYLHQ--KYALKKNACAFPKVEFH 58
Query: 252 LSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 ASGDVVWLEKQAKEWL 74
>gi|223039517|ref|ZP_03609805.1| aspartate racemase [Campylobacter rectus RM3267]
gi|222879313|gb|EEF14406.1| aspartate racemase [Campylobacter rectus RM3267]
Length = 227
Score = 41.5 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 55/161 (34%), Gaps = 8/161 (4%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L IACNTA K + ++ + + + + + I++++T T
Sbjct: 70 LKNAGCEAICIACNTAHYFAKRLTQECGVNILHIAKIATASIKSNFPHAKKIAVIATTGT 129
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
N + + + ++ ++ G K + +K+ +
Sbjct: 130 TAAKIYENEL--IAADLTCVKIPENLMTDIMDCIYKGAKANK--LKEYVGLFNDTIAAIE 185
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232
D + ACT PL + + ++D + +A+ A
Sbjct: 186 ADAYIAACTEIPLFLP----YATKKDKFVDATLELAKAAVK 222
>gi|10121332|gb|AAG13132.1| glutamate racemase [Helicobacter pylori]
Length = 76
Score = 41.5 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 19/76 (25%), Gaps = 8/76 (10%)
Query: 198 ACTHYPLIVHVFRQLSPWPVDW------LDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
CTH+PLI + + D+I + F
Sbjct: 1 GCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNAHAFPKVEFH 58
Query: 252 LSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 ASGDVIWLEKQAKEWL 74
>gi|323142229|ref|ZP_08077063.1| aspartate racemase [Phascolarctobacterium sp. YIT 12067]
gi|322413292|gb|EFY04177.1| aspartate racemase [Phascolarctobacterium sp. YIT 12067]
Length = 240
Score = 41.5 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 26/169 (15%), Positives = 49/169 (28%), Gaps = 10/169 (5%)
Query: 71 ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPA 130
L + + CNTA D+ P +K A + +LST
Sbjct: 78 QLCDMGADVLAVPCNTAH-FFIDQFADELPVPLLHIVDETVKAAKELSPEKGAWMLSTKG 136
Query: 131 TLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKE--DEIKKEIEGCFIEKE 188
T +I + V ++ + +K+ +E + E++
Sbjct: 137 TRACGLYQKYAEKRGLTLYIPNEEQSDKSQEVINCVKANQLAKAGAIMKELVEELWAERD 196
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237
++ ACT PL P + + ++A L
Sbjct: 197 IP----VMTACTELPLGYD--ASGLPQE-RSVSSIGALADACVRALYEE 238
>gi|19910924|dbj|BAB87713.1| glutamate racemase [Helicobacter pylori]
Length = 76
Score = 41.5 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 20/76 (26%), Gaps = 8/76 (10%)
Query: 198 ACTHYPLIVHVFRQLSPWPVDW------LDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
CTH+PLI H + + D+I + F
Sbjct: 1 GCTHFPLIAHQIEGYFMEHFALSTPPLLVHSGDAIVEYLQQ--KYALKKNACAFPKVEFH 58
Query: 252 LSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 ASGDVVWLEKQAKEWL 74
>gi|329769721|ref|ZP_08261122.1| hypothetical protein HMPREF0433_00886 [Gemella sanguinis M325]
gi|328838083|gb|EGF87701.1| hypothetical protein HMPREF0433_00886 [Gemella sanguinis M325]
Length = 214
Score = 41.5 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 60/166 (36%), Gaps = 11/166 (6%)
Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA 115
+ K ++ + + +K V+ V + + + D L P
Sbjct: 49 SERE--KIIVEIIEQLKEKNCEVIFVYCNSLSSVVDFDRL---AIEHNIKIVTPMQMYRN 103
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
+ +++++ + +NL + +S + L +EE +I +D
Sbjct: 104 LGLEYKYLAVMAANSHGLTGVENNLY-VSNPSLRVLGLSMLELVKAIEEENSPEEIVKDF 162
Query: 176 IKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLD 221
+ + F + + + +VL CTH+P I +++ + +D
Sbjct: 163 NFEVLFNYFEQ---TKVEAVVLGCTHFPYIKKELEKIT--NLPIID 203
>gi|31505491|gb|AAO62581.1| amino acid racemase [Anabaena sp. 90]
gi|31616729|emb|CAD60096.1| amino acid racemase [Anabaena circinalis 90]
Length = 252
Score = 41.5 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 18/174 (10%), Positives = 48/174 (27%), Gaps = 13/174 (7%)
Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
+ + VI C TA + + P + IK A
Sbjct: 62 EREFIDFVQIHLEK--LNQLVDRIVIGCCTAHYAL-----AHLPEHQTNKVISLIKIADQ 114
Query: 117 YTQSG--LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174
Q+ +L+ T ++ + ++ + + +
Sbjct: 115 QLQAHDEPALLLAGSGTYKKKLFEQGCTAANMIISPDEKDYHLIHEMIFKVLKRGQNPL- 173
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
I ++++ + + + CT + ++ + + +D +IA
Sbjct: 174 IILEDVQKLLDKYNTR---SFISGCTEFHILAKHLKLNRIDSIQAIDPLTTIAE 224
>gi|328886300|emb|CCA59539.1| aspartate racemase [Streptomyces venezuelae ATCC 10712]
Length = 235
Score = 41.5 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 48/165 (29%), Gaps = 7/165 (4%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L ++ L I CNTA L+ D + V A A + +T
Sbjct: 77 FTLVEWGADLLAIPCNTAHALLDDIASELPA--PLVDIVDATLDEAVRLSPEGGWLTATT 134
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ + H+ + + +E +
Sbjct: 135 GTVASGVYQKRAAARGYPLHVPRDAEQERVHAAAGLVKAGR--TEEAAGAFQDVVTSLLR 192
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+R ++ ACT P + H L P + + +++R L
Sbjct: 193 RRPLPVLAACTELP-LAHRASALPPES--MVSSLHALSRACVAAL 234
>gi|255321352|ref|ZP_05362512.1| aspartate racemase [Campylobacter showae RM3277]
gi|255301505|gb|EET80762.1| aspartate racemase [Campylobacter showae RM3277]
Length = 227
Score = 41.1 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 25/161 (15%), Positives = 56/161 (34%), Gaps = 8/161 (4%)
Query: 72 LDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPAT 131
L IACNTA K ++ + + + + + I++++T T
Sbjct: 70 LKNAGCEAICIACNTAHYFAKRLTDECGVNILHIAKIATASIKSNFPHAKKIAVIATTGT 129
Query: 132 LRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKR 191
N + + + ++ + ++ G K + +K+ +E
Sbjct: 130 TAAKIYENEL--IAAGLECVKIPENLMTNIMDCIYKGAKANK--LKEYVELFNDTIAAIE 185
Query: 192 TDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARC 232
D + ACT PL + + ++D + +A+ A
Sbjct: 186 ADAYIAACTEIPLFLP----YATKKDKFVDATLELAKAAVK 222
>gi|325121892|gb|ADY81415.1| hydantoin racemase [Acinetobacter calcoaceticus PHEA-2]
Length = 244
Score = 41.1 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 21/186 (11%), Positives = 56/186 (30%), Gaps = 22/186 (11%)
Query: 58 HALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAY 117
+++ + ++ A + +G A + A+Y
Sbjct: 59 EEIRQGEQLNVDAYIIACFGDPALYAAREMTSA------------PVIGIAEAAMRTASY 106
Query: 118 TQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIK 177
+G + + T+ ++ + ++ + I +E D +
Sbjct: 107 ISTGFSVVTTLQRTVNMSW-HLAHRYGATPFCKNVRACDIAVEELE------LPDSDAYR 159
Query: 178 KEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRI 237
+ C ++D IVL C + + V +D + A + +L ++
Sbjct: 160 IVRDECKKALAEDKSDTIVLGCAGMSDLCLKLQNELG--VIVID-GVAAAVKLAEMLVQL 216
Query: 238 NTHQTR 243
N ++
Sbjct: 217 NLKTSK 222
>gi|240172289|ref|ZP_04750948.1| putative dehydrogenase/reductase [Mycobacterium kansasii ATCC
12478]
Length = 393
Score = 41.1 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVAD 46
+ +I+I +G+GGL +R L+P I + D
Sbjct: 1 MSKTIVILGAGVGGLTTADSLRQLLPPEDRIILVD 35
>gi|289523633|ref|ZP_06440487.1| aspartate racemase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
gi|289503325|gb|EFD24489.1| aspartate racemase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
Length = 250
Score = 41.1 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 26/173 (15%), Positives = 50/173 (28%), Gaps = 8/173 (4%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L + L I CNTA I + V A + SG +L+T
Sbjct: 86 RKLASWGADLLAIPCNTAHYFIDKM--EADLPKPLIHIVEATLEETKRRTSGGAWLLATS 143
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T++ Q + SS E ++ ++
Sbjct: 144 GTIKTELYQKHAPRMGVQLLLPEKSSQEQIQNCIELVKKNDLQG--AGSLLKDILSSLSR 201
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQT 242
+R + ACT PL + + +++A + ++ + +
Sbjct: 202 ERDLPFIAACTEIPLAFKAI----GKESLMISSLNALALKCISVIYDQKSLCS 250
>gi|224367434|ref|YP_002601597.1| RacD1 [Desulfobacterium autotrophicum HRM2]
gi|223690150|gb|ACN13433.1| RacD1 [Desulfobacterium autotrophicum HRM2]
Length = 241
Score = 40.7 bits (94), Expect = 0.22, Method: Composition-based stats.
Identities = 24/179 (13%), Positives = 48/179 (26%), Gaps = 11/179 (6%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
M L+ + VIACNTA + ++ + V +
Sbjct: 68 CMADMGRRLETWGADFLVIACNTAHHYYQAV--QDAVNIPVIHIVGLVTDHLIQKYPEHK 125
Query: 124 SI--LSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
I L++PA + S I + + E+ +
Sbjct: 126 KIGMLASPAVAMTGLYTKRFQSKGL-IDIWPKPEVQQQMLEVIKSVKKGESGPEVTNRYK 184
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTH 240
+ + V+ACT + P+ +D + +A+ +
Sbjct: 185 NICRHLAEQGATLAVVACTELSALDCNL------PIPAVDAAQVLAQEIVDVAKNRKPL 237
>gi|294012547|ref|YP_003546007.1| aspartate racemase [Sphingobium japonicum UT26S]
gi|292675877|dbj|BAI97395.1| aspartate racemase [Sphingobium japonicum UT26S]
Length = 246
Score = 40.7 bits (94), Expect = 0.22, Method: Composition-based stats.
Identities = 19/171 (11%), Positives = 54/171 (31%), Gaps = 6/171 (3%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L++ +I N+ + + + + A+ +
Sbjct: 79 VLTASARRLEQGGAAALLICANSMHRVYDEV--QAGVDIPIVNIAEAVGRKMQADGIEKA 136
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+++ T + + + ++ + R+ I E ++ ++
Sbjct: 137 ALIGTRNVMTEKFYRQRLVAHGISLLPPDMELADRIDRIVYDELTIGKVSRESERYMKSE 196
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ + +LACT +IV V + P D + AR ++
Sbjct: 197 LTDIAKENVQAAILACTELEMIVDVKANVLP----IYDGTSIHARAGVDVI 243
>gi|87162592|gb|ABD28387.1| Asp/Glu racemase [Medicago truncatula]
Length = 321
Score = 40.7 bits (94), Expect = 0.23, Method: Composition-based stats.
Identities = 33/195 (16%), Positives = 58/195 (29%), Gaps = 28/195 (14%)
Query: 54 NWEDHALKKRLMFLFSD------ILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGA 107
+ K + L+ V+ CN + + E S S+ FL
Sbjct: 126 ERSLESFKVDSSQIVQSLRNKRVFLENSGARCIVMPCNVSHS--WYEQVSIGCSVPFLHM 183
Query: 108 VPAIKQAAAYTQ--------SGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA 159
+ + + I +L+T ATL + + + + IL
Sbjct: 184 AECVAKELKEAKLKPLEAGSPLRIGVLATNATLAAGFYKEKLQNEGFEV--------ILP 235
Query: 160 SRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWP--- 216
R I E +K++EG ++V A L R + P
Sbjct: 236 DRATMEHTVIPATEALSRKDMEGACNLLRIALQVLLVRAVNFVILASDEMRDVLPHDDPL 295
Query: 217 -VDWLDNSDSIARRA 230
+D D++AR
Sbjct: 296 LKKCIDPMDALARST 310
>gi|224140919|ref|XP_002323824.1| predicted protein [Populus trichocarpa]
gi|222866826|gb|EEF03957.1| predicted protein [Populus trichocarpa]
Length = 699
Score = 40.7 bits (94), Expect = 0.23, Method: Composition-based stats.
Identities = 20/176 (11%), Positives = 48/176 (27%), Gaps = 8/176 (4%)
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
++V + + + + + +T G +++TP L+
Sbjct: 290 KCMTVYQTYILSMNERIRNQFADSNPFKFKHISPLNSIEDFTDVGPSVVMATPGGLQSGL 349
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
+ L + S + +I VE I E + + + G + +
Sbjct: 350 SRQLFDMWCSDKK---NACVIPGFLVEGTLAKTIINEPKEVQLMNGLTAPLNMQVHYISF 406
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
A Y ++L P + + A L + + +
Sbjct: 407 SAHADYAQTSTFLKELMPPNIILVHGE---ANEMGRL--KQKLITEFTDGNTKIIT 457
>gi|18377654|gb|AAL66977.1| putative cleavage and polyadenylation specificity factor
[Arabidopsis thaliana]
Length = 693
Score = 40.7 bits (94), Expect = 0.23, Method: Composition-based stats.
Identities = 20/176 (11%), Positives = 47/176 (26%), Gaps = 8/176 (4%)
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
++V + + + + + + G +++TP L+
Sbjct: 287 KCMAVYQTYILSMNDRIRNQFANSNPFVFKHISPLNSIDDFNDVGPSVVMATPGGLQSGL 346
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
+ L S+ S + +I VE I E + + G + +
Sbjct: 347 SRQLFDSWCSDKK---NACIIPGYMVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISF 403
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
A Y ++L P + + A L + + +
Sbjct: 404 SAHADYAQTSTFLKELMPPNIILVHGE---ANEMMRL--KQKLLTEFPDGNTKIMT 454
>gi|15219848|ref|NP_176297.1| CPSF73-I (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 73-I);
protein binding [Arabidopsis thaliana]
gi|30696512|ref|NP_849835.1| CPSF73-I (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 73-I);
protein binding [Arabidopsis thaliana]
gi|79320389|ref|NP_001031215.1| CPSF73-I (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 73-I);
protein binding [Arabidopsis thaliana]
gi|75262219|sp|Q9C952|CPSF3_ARATH RecName: Full=Cleavage and polyadenylation specificity factor
subunit 3-I; AltName: Full=Cleavage and polyadenylation
specificity factor 73 kDa subunit I; Short=AtCPSF73-I;
Short=CPSF 73 kDa subunit I
gi|12323330|gb|AAG51638.1|AC018908_4 putative cleavage and polyadenylation specificity factor;
72745-70039 [Arabidopsis thaliana]
gi|23297661|gb|AAN13003.1| putative cleavage and polyadenylation specificity factor
[Arabidopsis thaliana]
gi|24415578|gb|AAN41458.1| putative cleavage and polyadenylation specificity factor 73 kDa
subunit [Arabidopsis thaliana]
gi|222422865|dbj|BAH19419.1| AT1G61010 [Arabidopsis thaliana]
gi|222423059|dbj|BAH19511.1| AT1G61010 [Arabidopsis thaliana]
gi|332195645|gb|AEE33766.1| cleavage and polyadenylation specificity factor subunit 3-I
[Arabidopsis thaliana]
gi|332195646|gb|AEE33767.1| cleavage and polyadenylation specificity factor subunit 3-I
[Arabidopsis thaliana]
gi|332195647|gb|AEE33768.1| cleavage and polyadenylation specificity factor subunit 3-I
[Arabidopsis thaliana]
Length = 693
Score = 40.7 bits (94), Expect = 0.24, Method: Composition-based stats.
Identities = 20/176 (11%), Positives = 47/176 (26%), Gaps = 8/176 (4%)
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
++V + + + + + + G +++TP L+
Sbjct: 287 KCMAVYQTYILSMNDRIRNQFANSNPFVFKHISPLNSIDDFNDVGPSVVMATPGGLQSGL 346
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
+ L S+ S + +I VE I E + + G + +
Sbjct: 347 SRQLFDSWCSDKK---NACIIPGYMVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISF 403
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
A Y ++L P + + A L + + +
Sbjct: 404 SAHADYAQTSTFLKELMPPNIILVHGE---ANEMMRL--KQKLLTEFPDGNTKIMT 454
>gi|307293948|ref|ZP_07573792.1| aspartate racemase [Sphingobium chlorophenolicum L-1]
gi|306880099|gb|EFN11316.1| aspartate racemase [Sphingobium chlorophenolicum L-1]
Length = 230
Score = 40.7 bits (94), Expect = 0.24, Method: Composition-based stats.
Identities = 19/171 (11%), Positives = 55/171 (32%), Gaps = 6/171 (3%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L++ +I N+ + + + + A+ +
Sbjct: 63 VLIASARRLEQGGAAALLICANSMHRVYDEV--QAGVDIPIINIAEAVGRRMQADGIEKA 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+++ T + + + ++ + R+ I E ++ ++
Sbjct: 121 ALIGTRNVMTEKFYRQRLVAHGISLLPPDMELAERIDRIVYDELTIGKVSRESERYMKSE 180
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ ++ +LACT +IV V + P D + AR ++
Sbjct: 181 LTDIAKEQVQAAILACTELEMIVDVKANVLP----IYDGTSIHARAGVEVI 227
>gi|32265574|ref|NP_859606.1| aspartate racemase [Helicobacter hepaticus ATCC 51449]
gi|32261622|gb|AAP76672.1| aspartate racemase [Helicobacter hepaticus ATCC 51449]
Length = 241
Score = 40.3 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 19/142 (13%), Positives = 44/142 (30%), Gaps = 9/142 (6%)
Query: 68 FSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILS 127
+ L + + CNTA + +++ P + L + + + + + +++
Sbjct: 75 IAKRLQNFGAQTLCMCCNTAH-YSFETIKAALPQVKMLNLIESAVLKVKQSGAKSVGLVA 133
Query: 128 TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACG-------IKIKEDEIKKEI 180
+ L+ + I + +V + C + K I
Sbjct: 134 SDGCLKGRVYERYFEKICPEVKII-YPNAEFQKKVTQGICNIKNAHRFDTMDSKARPKNI 192
Query: 181 EGCFIEKEGKRTDVIVLACTHY 202
E D+I+L CT
Sbjct: 193 FKQVCEHLLGGGDIILLGCTDI 214
>gi|19910928|dbj|BAB87716.1| glutamate racemase [Helicobacter pylori]
Length = 76
Score = 40.3 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 19/76 (25%), Gaps = 8/76 (10%)
Query: 198 ACTHYPLIVHVFRQLSPWPVDW------LDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
CTH+PLI + + D+I + F
Sbjct: 1 GCTHFPLIAQKIESYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFPKVEFR 58
Query: 252 LSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 ASGDVVWLEKQAKEWL 74
>gi|85707890|ref|ZP_01038956.1| putative aspartate/glutamate racemase [Erythrobacter sp. NAP1]
gi|85689424|gb|EAQ29427.1| putative aspartate/glutamate racemase [Erythrobacter sp. NAP1]
Length = 236
Score = 40.3 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 24/173 (13%), Positives = 56/173 (32%), Gaps = 6/173 (3%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L+ +I N+ L D S + L + +A +++ T
Sbjct: 70 AKRLEGAGAEALIIGANSMHKLYDDV--SAGVDIPILHIADYVGKALKRAGHKTAALIGT 127
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
+ ++ + ++ + ++ R+ + + ++ ++ K
Sbjct: 128 RNVMTESFYRKRLVAHGIDLLPPNMINVETLDRIIYDELMVGKVTRDAQRAMKTIITNKA 187
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D IVLACT L+V V + P D++ A +
Sbjct: 188 QEGADSIVLACTELDLVVDVDANVLP----VFDSTRIHCEAAADWILEQELVN 236
>gi|306479819|emb|CBV36062.1| glutamate racemase [Helicobacter pylori]
Length = 75
Score = 40.0 bits (92), Expect = 0.40, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 20/75 (26%), Gaps = 8/75 (10%)
Query: 199 CTHYPLIVHVFRQLSPWPVDW------LDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
CTH+PLI H + + D+I + F
Sbjct: 1 CTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDAIVEYLQQ--KYALKKNACAFPKVEFHA 58
Query: 253 SGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 SGDVVWLEKQAKEWL 73
>gi|295688810|ref|YP_003592503.1| aspartate racemase [Caulobacter segnis ATCC 21756]
gi|295430713|gb|ADG09885.1| aspartate racemase [Caulobacter segnis ATCC 21756]
Length = 225
Score = 40.0 bits (92), Expect = 0.41, Method: Composition-based stats.
Identities = 31/174 (17%), Positives = 68/174 (39%), Gaps = 18/174 (10%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L + IACNTA D +R+ + + + AA + ++
Sbjct: 59 VLAAMATGLRDAGAQVLAIACNTAHAYA-DAVRA--SGLPLVDMLETAGLAAKAKGAAVV 115
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI----KKE 179
+L T + ++ V ++ +VE A +IK ++ ++
Sbjct: 116 GVLGT-------GVALALYRDCFFHMGLEVVTLDDHEQVEFMALLYRIKHGDVGSASRET 168
Query: 180 IEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
+ GK + +V CT PL++ + V +LD ++++A+R +
Sbjct: 169 MAALAHRLVGKGAESVVAGCTEVPLVLT----AADLSVPFLDATEALAQRCVAV 218
>gi|297837375|ref|XP_002886569.1| hypothetical protein ARALYDRAFT_475225 [Arabidopsis lyrata subsp.
lyrata]
gi|297332410|gb|EFH62828.1| hypothetical protein ARALYDRAFT_475225 [Arabidopsis lyrata subsp.
lyrata]
Length = 693
Score = 39.6 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 20/176 (11%), Positives = 47/176 (26%), Gaps = 8/176 (4%)
Query: 77 PVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTY 136
++V + + + + + + G +++TP L+
Sbjct: 287 KCMAVYQTYILSMNDRIRNQFANSNPFVFKHISPLNSIDDFNDVGPSVVMATPGGLQSGL 346
Query: 137 TSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIV 196
+ L S+ S + +I VE I E + + G + +
Sbjct: 347 SRQLFDSWCSDKK---NACIIPGYMVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISF 403
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFL 252
A Y ++L P + + A L + + +
Sbjct: 404 SAHADYAQTSTFLKELMPPNIILVHGE---ANEMMRL--KQKLFTEFPDGNTKIMT 454
>gi|291326871|ref|ZP_06126146.2| putative aspartate racemase [Providencia rettgeri DSM 1131]
gi|291312313|gb|EFE52766.1| putative aspartate racemase [Providencia rettgeri DSM 1131]
Length = 155
Score = 39.6 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 31/107 (28%), Gaps = 15/107 (14%)
Query: 46 DDVGFPYGNWEDHALKKRLMFLFSD-------------ILDKYQPVLSVIACNTAFTLIK 92
D P + R L + L+ VI CNTA
Sbjct: 50 DQEHIPLIISSIPDIPDRTDALLNHGESPLPLMTDYLRKLENAGAECIVIPCNTAH-FWF 108
Query: 93 DELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYTSN 139
EL+ + L V + T+ I +L+T AT+
Sbjct: 109 SELKEVC-HVDMLSIVETTMKEVLVTKKKNIGLLATNATMYMGLYQK 154
>gi|330808822|ref|YP_004353284.1| xanthine dehydrogenase accessory factor [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327376930|gb|AEA68280.1| Putative xanthine dehydrogenase accessory factor [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 392
Score = 39.6 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 19/182 (10%), Positives = 53/182 (29%), Gaps = 16/182 (8%)
Query: 56 EDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAA 115
++ +D + + + CN L P+ + A+++
Sbjct: 72 SGPVIRSYSTAEATDEEGGEESLGFGLGCNG----KVYVLFERIPATKQCAVLDALRKV- 126
Query: 116 AYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
+ ++T R +++ + + + E +++ D+
Sbjct: 127 --RNNQRPVAIATVIAGSRNSRADVGDRVFLESGAAPFGGLYHPALNERIIADLRLTLDQ 184
Query: 176 IKKEIEGC---------FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSI 226
K + F+E +++ H + ++ W V +D+
Sbjct: 185 QKSTRQRYTEGYAEVEVFLEYVAPPPRLMIFGAGHDAQPLVRIAKILGWHVTVVDSRPHF 244
Query: 227 AR 228
AR
Sbjct: 245 AR 246
>gi|282858060|ref|ZP_06267256.1| aspartate racemase [Pyramidobacter piscolens W5455]
gi|282584107|gb|EFB89479.1| aspartate racemase [Pyramidobacter piscolens W5455]
Length = 235
Score = 39.6 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 32/159 (20%), Positives = 48/159 (30%), Gaps = 17/159 (10%)
Query: 53 GNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTL---IKDELRSTFPSMAFLGAVP 109
G AL++ L D L + L + CNTA + +LR+ +
Sbjct: 62 GESPAAALRQGL-----DTLCGWGADLLAVPCNTAHIFIDPFRAQLRAPLIHIVEATVAD 116
Query: 110 AIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILA-SRVEEYACG 168
A+K A I++T AT+ + LA + G
Sbjct: 117 AVKAAPDGC-----WIIATGATMASGIYEKEAARRGYRFFAPSEEVRELATKAIVHVKAG 171
Query: 169 IKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVH 207
+ +EI IV ACT PL
Sbjct: 172 ELKAGGAVMEEIAARLWAVRRAP---IVTACTELPLAYD 207
>gi|320180171|gb|EFW55109.1| Glutamate racemase [Shigella boydii ATCC 9905]
Length = 61
Score = 39.6 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 221 DNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD-IAMRRLMQGFGLKS 271
D+ +IARR LL + A ++ P+ + ++Q +G ++
Sbjct: 2 DSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTPEAEQLLPVLQRYGFET 53
>gi|19910918|dbj|BAB87710.1| glutamate racemase [Helicobacter pylori]
Length = 76
Score = 39.6 bits (91), Expect = 0.48, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 20/76 (26%), Gaps = 8/76 (10%)
Query: 198 ACTHYPLIVHVFRQLSPWPVDW------LDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
CTH+PLI H + + D+I R F
Sbjct: 1 GCTHFPLIAHQIEGYFMEHFALSTPPLLIHSGDTIVEYLRQ--KYALKKNACAFPKVEFH 58
Query: 252 LSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 ASGDAIWLEKQAKEWL 74
>gi|78223364|ref|YP_385111.1| two component AraC family transcriptional regulator [Geobacter
metallireducens GS-15]
gi|78194619|gb|ABB32386.1| two component transcriptional regulator, AraC family [Geobacter
metallireducens GS-15]
Length = 250
Score = 39.6 bits (91), Expect = 0.48, Method: Composition-based stats.
Identities = 18/130 (13%), Positives = 41/130 (31%), Gaps = 23/130 (17%)
Query: 11 KLQNSILIFDSGI---GGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWEDHAL------- 60
I+I DSG GG+ +L +++ L + I++ D +
Sbjct: 43 PSDPDIVILDSGTDADGGITLLGEIKALRNDLPVIFLTDS--------SSEEIVLKAFRK 94
Query: 61 --KKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAF--LGAVPAIKQAAA 116
++ + ++ + A +D L+ + +I +A
Sbjct: 95 GAREYFRKPVDLHVLQHAVETIL-ALRRMQRERRDPLKRHYSDPINLPDDLPESIGRAVM 153
Query: 117 YTQSGLISIL 126
+ +S L
Sbjct: 154 HIKSNYDCAL 163
>gi|302557714|ref|ZP_07310056.1| Asp/Glu racemase [Streptomyces griseoflavus Tu4000]
gi|302475332|gb|EFL38425.1| Asp/Glu racemase [Streptomyces griseoflavus Tu4000]
Length = 305
Score = 39.6 bits (91), Expect = 0.51, Method: Composition-based stats.
Identities = 31/198 (15%), Positives = 56/198 (28%), Gaps = 25/198 (12%)
Query: 60 LKKRLMFLFSDILDKYQPVLSVIAC------NTAFTLIKDELRSTFPSMAFLGAVPAIKQ 113
L++R++ L ++D L + NTA L ++ L + A+ +
Sbjct: 56 LRRRMLRLIGHVIDGGAQALLLTCSSYGDVVNTAHALW---------NVPVLKSDEAMFR 106
Query: 114 AAAYTQSGLISILS--TPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
AA I +++ PA + V + + + G
Sbjct: 107 AALSGPYRRIGVVASTPPAVPAAVAQLEALVPEVRPDRPVGIVTALSEEAATAGDPG--- 163
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRAR 231
+ + G D ++LA L V LD + + AR R
Sbjct: 164 ---AAARHLADALYATGGAEVDAVLLAQYSLTPAREALAALLG--VPVLDGAGAAARELR 218
Query: 232 CLLPRINTHQTRVFDDHA 249
LL
Sbjct: 219 ALLTPGERPAAHGPGGRT 236
>gi|149913430|ref|ZP_01901963.1| arginine/ornithine transport system ATPase [Roseobacter sp.
AzwK-3b]
gi|149812550|gb|EDM72379.1| arginine/ornithine transport system ATPase [Roseobacter sp.
AzwK-3b]
Length = 226
Score = 39.2 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 24/159 (15%), Positives = 50/159 (31%), Gaps = 9/159 (5%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L+ + CNTA K + FL + A + +
Sbjct: 63 VLAKMARDLEAAGAAALAMPCNTAHHYAKAV--EEASDLPFLDMLELTAAELARAGARRV 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+L++PAT + + + L L + + G + + +
Sbjct: 121 GLLASPATRLTGVFEAPFAAQGLEP-VTLPDDSGLLAIIRAVKAGEDPEGLAPR--LAEQ 177
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDN 222
+ D +++ACT L+ P W D+
Sbjct: 178 ANALVAEGADHLLVACTELSLLTD----ALPGGTSWTDS 212
>gi|255965975|gb|ACU45273.1| amino acid racemase-like [Karlodinium veneficum]
Length = 239
Score = 39.2 bits (90), Expect = 0.64, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 60/179 (33%), Gaps = 9/179 (5%)
Query: 51 PYGNWEDHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPA 110
PY L M ++ I CNT +++D +R A +
Sbjct: 66 PY------QLVWESMTDTIRRINLLGLDRFCIPCNTLH-ILQDRIREFCREEAIDSQFVS 118
Query: 111 IKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIK 170
I S L+ +L + +S I L ++ R+++ +K
Sbjct: 119 IVDCVMAHCSDSGKQLAVFGSLPASSSSVESPYSKLPNRIVL--DEVVRRRLQDLLGAVK 176
Query: 171 IKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
+K DE +++ D VLAC+ P+++ + + +D +A
Sbjct: 177 LKPDEREQQARELEALLSEVEADAYVLACSELPMLLPYLSEFTLREKTLIDPGALLAEE 235
>gi|87199864|ref|YP_497121.1| aspartate racemase [Novosphingobium aromaticivorans DSM 12444]
gi|87135545|gb|ABD26287.1| Aspartate racemase [Novosphingobium aromaticivorans DSM 12444]
Length = 230
Score = 39.2 bits (90), Expect = 0.66, Method: Composition-based stats.
Identities = 19/171 (11%), Positives = 51/171 (29%), Gaps = 6/171 (3%)
Query: 64 LMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLI 123
++ + L++ +I N+ + + S+ + A+
Sbjct: 63 VLTDSARRLEQAGATALLIGANSMHKVYDQV--AGAVSIPVIHIADAVGVRMKADGVTNA 120
Query: 124 SILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGC 183
+IL T + ++ + S+ ++ + R+ ++ +
Sbjct: 121 TILGTHNVVMESFYRKRLVSHGINLLPPVLGEVDEMDRIIYEELMQGRATRSAERTFKTM 180
Query: 184 FIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ VL CT +++ V + P D + A A +
Sbjct: 181 LTNMGQRGAQAAVLGCTELDMVIDVDANVLP----IYDGTRIHAEAAVDWI 227
>gi|154174439|ref|YP_001407836.1| aspartate racemase [Campylobacter curvus 525.92]
gi|153793095|gb|EAT99446.2| aspartate racemase [Campylobacter curvus 525.92]
Length = 232
Score = 38.8 bits (89), Expect = 0.75, Method: Composition-based stats.
Identities = 23/163 (14%), Positives = 51/163 (31%), Gaps = 14/163 (8%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA--YTQSGLISIL 126
+ L +++CNTA +D + L A A Y + I+++
Sbjct: 70 AKRLKNAGCEALLMSCNTAHFFAEDI--QKQAGVKILHIARAAVDAIKGRYPDAKDIAVI 127
Query: 127 STPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIE 186
+T T + ++ Y ++ + F +
Sbjct: 128 ATSGTKKARVYDKILDEYRLNSVSFTKEQQDGIMDCIYKGVKAGKTQEFV-----PIFNK 182
Query: 187 KEGK-RTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIAR 228
+ DV + ACT P+ + + ++D + +A+
Sbjct: 183 IISGIKADVYIAACTEIPMFLPFLDRDY----KFIDATLELAK 221
>gi|163847786|ref|YP_001635830.1| hypothetical protein Caur_2232 [Chloroflexus aurantiacus J-10-fl]
gi|222525654|ref|YP_002570125.1| hypothetical protein Chy400_2405 [Chloroflexus sp. Y-400-fl]
gi|163669075|gb|ABY35441.1| conserved hypothetical protein [Chloroflexus aurantiacus J-10-fl]
gi|222449533|gb|ACM53799.1| conserved hypothetical protein [Chloroflexus sp. Y-400-fl]
Length = 331
Score = 38.8 bits (89), Expect = 0.77, Method: Composition-based stats.
Identities = 31/157 (19%), Positives = 47/157 (29%), Gaps = 20/157 (12%)
Query: 24 GGLIVLQKM-RFLMPEYHFIYVADDVGFPYGNWEDHALKKR-LMFLFSDILDKYQPVLSV 81
GG + Q M R PE IY+A + G +H L F L SV
Sbjct: 60 GGFALAQAMGRRGRPEQDVIYLATN-----GTRSEHTPSDYELWFHLLHQLCANAAHHSV 114
Query: 82 IACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST---PATLRRTYTS 138
A +ELR F + F AYT L + T
Sbjct: 115 QRLYAALPCQHNELREIFRQVGFQ----------AYTHRHLFHLSGPDWDQGTRLAPMRM 164
Query: 139 NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDE 175
+ + ++ +++ L + E Y +
Sbjct: 165 QARRDHWAIHKLYGMATPHLVQQAEVYNARNWTLHEA 201
>gi|67902860|ref|XP_681686.1| hypothetical protein AN8417.2 [Aspergillus nidulans FGSC A4]
gi|40747883|gb|EAA67039.1| hypothetical protein AN8417.2 [Aspergillus nidulans FGSC A4]
gi|259484353|tpe|CBF80499.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 627
Score = 38.8 bits (89), Expect = 0.81, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 48/157 (30%), Gaps = 9/157 (5%)
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
++AC + L LR + ++ A T G I+ T + +T
Sbjct: 453 DAFLVACYSEHPL-IKALREELTTPVVGIMEASLFAA--RTLGGRFGIVVTSSRSGVLHT 509
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVL 197
++ I + S + +E E E+ + G + + DVI L
Sbjct: 510 DSIRRYGYEGFSIGVESCGLGVLGLERK------GEQEVLDAMCGAARKLVERGADVITL 563
Query: 198 ACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
C + + + +D + LL
Sbjct: 564 GCAGMTKLKEAVEEAVGPEIQVVDGVVAGVHHLIGLL 600
>gi|310800198|gb|EFQ35091.1| carbon-nitrogen hydrolase [Glomerella graminicola M1.001]
Length = 603
Score = 38.8 bits (89), Expect = 0.89, Method: Composition-based stats.
Identities = 24/157 (15%), Positives = 44/157 (28%), Gaps = 9/157 (5%)
Query: 78 VLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTPATLRRTYT 137
++AC + L LR P +G + A AA + +
Sbjct: 427 DAVLVACYSDHAL-IRMLREELPRQPVIGIMEASLFAARTLGGRFGLVAVSE-------R 478
Query: 138 SNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-EGKRTDVIV 196
S ++H + S + S + + E+ + E K DV++
Sbjct: 479 SRVLHEDSIHHYGFSTSCAGVISCKLGVLDLHEKSQGEVMGIMANVGKRLVEEKGADVLL 538
Query: 197 LACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCL 233
L C + V +D + L
Sbjct: 539 LGCAGMTPLKGAVEAAVGEDVQVVDGVLAGVHHLVGL 575
>gi|28976143|gb|AAO64408.1| NdaG [Nodularia spumigena]
Length = 235
Score = 38.8 bits (89), Expect = 0.93, Method: Composition-based stats.
Identities = 19/185 (10%), Positives = 49/185 (26%), Gaps = 13/185 (7%)
Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
+ + F + VI C A + + P + IK A
Sbjct: 62 EREFIDFIQFNLEN--LNKIVDHIVIGCCLAHYSLPEI-----PEHLTEKVISLIKIADQ 114
Query: 117 YTQSGL--ISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKED 174
Q +L++ T + + + ++ + + +
Sbjct: 115 ELQQHDESALLLASTGTYTKKLFQEGCAAAERIISLSETEQDLIDDMIFKILKRGQDPLT 174
Query: 175 EIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLL 234
+ I+ + + + CT + L + + +D +IA+ +
Sbjct: 175 ILPD-IQALLDKYNTRSY---ISGCTEFHLFTKSLKLNGIDSIKAIDPLSTIAQNFFQIF 230
Query: 235 PRINT 239
+
Sbjct: 231 DYNSL 235
>gi|10121334|gb|AAG13133.1| glutamate racemase [Helicobacter pylori]
Length = 76
Score = 38.4 bits (88), Expect = 0.96, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 21/76 (27%), Gaps = 8/76 (10%)
Query: 198 ACTHYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALF 251
CTH+PLI P P + + D+I + F
Sbjct: 1 GCTHFPLIAQKIEGYFMEHFALPTPPLLIHSGDAIVGYLQQ--KYALKKNACAFPKVEFH 58
Query: 252 LSGKPDIAMRRLMQGF 267
SG ++ +
Sbjct: 59 ASGDVIWLEKQAKEWL 74
>gi|332799598|ref|YP_004461097.1| Asp/Glu/hydantoin racemase [Tepidanaerobacter sp. Re1]
gi|332697333|gb|AEE91790.1| Asp/Glu/hydantoin racemase [Tepidanaerobacter sp. Re1]
Length = 223
Score = 38.4 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 20/169 (11%), Positives = 55/169 (32%), Gaps = 10/169 (5%)
Query: 57 DHALKKRLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAA 116
L K+++ + D + + + + + +R+T + + + AA
Sbjct: 56 PDTLTKKVLRIIQDFENHDIFRTMIYCNSLSAAIDIGYIRNTQTRSLVITPLDIYRNLAA 115
Query: 117 YTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEI 176
+ I++ + S I + I+ + E+ + I + ++
Sbjct: 116 RYKK--IALWAANGQCLSAIEHIFYEQNPSIDIIGISMLPIVKAIEEDQSAASIIDQYDL 173
Query: 177 KKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDS 225
F + ++L CTH P + + + +D ++
Sbjct: 174 VSLCVERFAP------NSLILGCTHLPYLQSELSKKI--SIPIIDPTEE 214
>gi|296284383|ref|ZP_06862381.1| aspartate racemase [Citromicrobium bathyomarinum JL354]
Length = 230
Score = 38.4 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 25/188 (13%), Positives = 60/188 (31%), Gaps = 9/188 (4%)
Query: 52 YG-NWEDHALKK-RLMFLFSDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVP 109
YG +D + ++ + L+ IA N+ L + + L
Sbjct: 49 YGLTKDDEWDRAAEILVNSAKRLEAAGAEALAIAANSMHRLYDQV--ADAVDVPVLHIAD 106
Query: 110 AIKQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGI 169
A+ + + +++ T + ++ + S+ +S++ + +
Sbjct: 107 AVGEKMKAAGAVNAALIGTRNVMTESFYRRKLVSHGIDLLPPDMSNVDRTNEIIYEELMR 166
Query: 170 KIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARR 229
++ E IVLACT +++ V + P D++ +
Sbjct: 167 GKASRNSERFFRTMITNLEQAGAKAIVLACTELDMVIDVDANVLP----IFDSARIHSEA 222
Query: 230 ARC-LLPR 236
+L R
Sbjct: 223 VVDWILER 230
>gi|262401906|ref|ZP_06078471.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Vibrio
sp. RC586]
gi|262351878|gb|EEZ01009.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Vibrio
sp. RC586]
Length = 423
Score = 38.0 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 30/237 (12%), Positives = 61/237 (25%), Gaps = 31/237 (13%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMP-EYHFIYVADDVG--------FPY---GNWEDHA 59
++ +I + +G+GG+ V+ ++R +P ++ I + + P+ G
Sbjct: 1 MKRTI-VIGAGLGGMSVVYELRQKLPKDHEVILI--NEHNEFHFIPSNPWVALGERTKEQ 57
Query: 60 LKKRLMFLFSDILDKYQPVLS--------VIACNTAFTLIKDELRSTFPSMAFLGAVPAI 111
+ L + P + D L V
Sbjct: 58 VVLDLTPYAKKFKIPFNPTGVTQILPDEKTLLAGDGTHYSYDYLVICTGPKLAFETVLGA 117
Query: 112 KQAAAYTQSGLISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKI 171
YTQS + A LI + + + E
Sbjct: 118 GPETGYTQSICTVDHAVKAH---EAYQALIANPGPVLVGAMQGASCFGPAYEYILTLESQ 174
Query: 172 KEDEIKKEIEGCFIEKEGKRTDVIVLA--CTHYPLIVHVFRQLSPWPVDWLDNSDSI 226
++ + L L+ H FR + W+ N+ +
Sbjct: 175 LRKLKIRDKVPITFVTSEPYVGHMGLGGVGDSKALMEHEFRD---RGIKWICNARAT 228
>gi|220915676|ref|YP_002490980.1| aspartate racemase [Anaeromyxobacter dehalogenans 2CP-1]
gi|219953530|gb|ACL63914.1| aspartate racemase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 234
Score = 38.0 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 28/173 (16%), Positives = 54/173 (31%), Gaps = 10/173 (5%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L++ L++ A T + LR P + V A + ++ ++ T
Sbjct: 70 RRLERAGATLALFAAVTPHRFL-PALRPRSP-LPIADLVGATCEDVRAAGHRVVGLVGTR 127
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-E 188
T+ + + + + + + + + K +K E+
Sbjct: 128 FTVSEPFFRDALEAAGVRVVVPDEAGTDYLDALIFGPLARGEKTPTMKGELAAIVGRMAR 187
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D +V+ACT L V LD DS R A +L
Sbjct: 188 REPLDALVVACT-------DLMDLMGTEVPLLDPIDSHLRLALRMLAASGARA 233
>gi|15839718|ref|NP_334755.1| phage tail component protein, putative [Mycobacterium
tuberculosis CDC1551]
gi|254363299|ref|ZP_04979345.1| hypothetical dehydrogenase/reductase [Mycobacterium tuberculosis
str. Haarlem]
gi|13879842|gb|AAK44569.1| phage tail component protein, putative [Mycobacterium
tuberculosis CDC1551]
gi|134148813|gb|EBA40858.1| hypothetical dehydrogenase/reductase [Mycobacterium tuberculosis
str. Haarlem]
gi|323721280|gb|EGB30337.1| dehydrogenase/reductase [Mycobacterium tuberculosis CDC1551A]
Length = 388
Score = 38.0 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVAD 46
+ ++LI +G+GGL +R L+P I + D
Sbjct: 1 MSKTVLILGAGVGGLTTADTLRQLLPPEDRIILVD 35
>gi|254230696|ref|ZP_04924023.1| hypothetical protein TBCG_00326 [Mycobacterium tuberculosis C]
gi|124599755|gb|EAY58765.1| hypothetical protein TBCG_00326 [Mycobacterium tuberculosis C]
Length = 421
Score = 38.0 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVAD 46
+ ++LI +G+GGL +R L+P I + D
Sbjct: 34 MSKTVLILGAGVGGLTTADTLRQLLPPEDRIILVD 68
>gi|15607472|ref|NP_214845.1| dehydrogenase/reductase [Mycobacterium tuberculosis H37Rv]
gi|31791509|ref|NP_854002.1| dehydrogenase/reductase [Mycobacterium bovis AF2122/97]
gi|121636245|ref|YP_976468.1| putative dehydrogenase/reductase [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|148660097|ref|YP_001281620.1| putative phage tail component protein [Mycobacterium tuberculosis
H37Ra]
gi|148821527|ref|YP_001286281.1| dehydrogenase/reductase [Mycobacterium tuberculosis F11]
gi|167967769|ref|ZP_02550046.1| hypothetical dehydrogenase/reductase [Mycobacterium tuberculosis
H37Ra]
gi|215406335|ref|ZP_03418516.1| dehydrogenase/reductase [Mycobacterium tuberculosis 02_1987]
gi|215409841|ref|ZP_03418649.1| dehydrogenase/reductase [Mycobacterium tuberculosis 94_M4241A]
gi|215444415|ref|ZP_03431167.1| dehydrogenase/reductase [Mycobacterium tuberculosis T85]
gi|218751961|ref|ZP_03530757.1| dehydrogenase/reductase [Mycobacterium tuberculosis GM 1503]
gi|224988718|ref|YP_002643405.1| putative dehydrogenase/reductase [Mycobacterium bovis BCG str.
Tokyo 172]
gi|253797257|ref|YP_003030258.1| dehydrogenase/reductase [Mycobacterium tuberculosis KZN 1435]
gi|254549274|ref|ZP_05139721.1| dehydrogenase/reductase [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260185202|ref|ZP_05762676.1| dehydrogenase/reductase [Mycobacterium tuberculosis CPHL_A]
gi|260203482|ref|ZP_05770973.1| dehydrogenase/reductase [Mycobacterium tuberculosis K85]
gi|289445870|ref|ZP_06435614.1| dehydrogenase/reductase [Mycobacterium tuberculosis CPHL_A]
gi|289552583|ref|ZP_06441793.1| dehydrogenase/reductase [Mycobacterium tuberculosis KZN 605]
gi|289572917|ref|ZP_06453144.1| dehydrogenase/reductase [Mycobacterium tuberculosis K85]
gi|289748100|ref|ZP_06507478.1| dehydrogenase/reductase [Mycobacterium tuberculosis 02_1987]
gi|289756395|ref|ZP_06515773.1| dehydrogenase/reductase [Mycobacterium tuberculosis T85]
gi|289760440|ref|ZP_06519818.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
gi|297632816|ref|ZP_06950596.1| dehydrogenase/reductase [Mycobacterium tuberculosis KZN 4207]
gi|297729791|ref|ZP_06958909.1| dehydrogenase/reductase [Mycobacterium tuberculosis KZN R506]
gi|298523808|ref|ZP_07011217.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|306774424|ref|ZP_07412761.1| dehydrogenase/reductase [Mycobacterium tuberculosis SUMu001]
gi|306779170|ref|ZP_07417507.1| dehydrogenase/reductase [Mycobacterium tuberculosis SUMu002]
gi|306782957|ref|ZP_07421279.1| dehydrogenase/reductase [Mycobacterium tuberculosis SUMu003]
gi|306787325|ref|ZP_07425647.1| dehydrogenase/reductase [Mycobacterium tuberculosis SUMu004]
gi|306791878|ref|ZP_07430180.1| dehydrogenase/reductase [Mycobacterium tuberculosis SUMu005]
gi|306796064|ref|ZP_07434366.1| dehydrogenase/reductase [Mycobacterium tuberculosis SUMu006]
gi|306801924|ref|ZP_07438592.1| dehydrogenase/reductase [Mycobacterium tuberculosis SUMu008]
gi|306806135|ref|ZP_07442803.1| dehydrogenase/reductase [Mycobacterium tuberculosis SUMu007]
gi|306966333|ref|ZP_07478994.1| dehydrogenase/reductase [Mycobacterium tuberculosis SUMu009]
gi|306970528|ref|ZP_07483189.1| dehydrogenase/reductase [Mycobacterium tuberculosis SUMu010]
gi|307078256|ref|ZP_07487426.1| dehydrogenase/reductase [Mycobacterium tuberculosis SUMu011]
gi|307082810|ref|ZP_07491923.1| dehydrogenase/reductase [Mycobacterium tuberculosis SUMu012]
gi|313657120|ref|ZP_07814000.1| dehydrogenase/reductase [Mycobacterium tuberculosis KZN V2475]
gi|2193952|emb|CAB09579.1| POSSIBLE DEHYDROGENASE/REDUCTASE [Mycobacterium tuberculosis
H37Rv]
gi|31617095|emb|CAD93202.1| POSSIBLE DEHYDROGENASE/REDUCTASE [Mycobacterium bovis AF2122/97]
gi|121491892|emb|CAL70355.1| Possible dehydrogenase/reductase [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|148504249|gb|ABQ72058.1| putative phage tail component protein [Mycobacterium tuberculosis
H37Ra]
gi|148720054|gb|ABR04679.1| hypothetical dehydrogenase/reductase [Mycobacterium tuberculosis
F11]
gi|224771831|dbj|BAH24637.1| putative dehydrogenase/reductase [Mycobacterium bovis BCG str.
Tokyo 172]
gi|253318760|gb|ACT23363.1| dehydrogenase/reductase [Mycobacterium tuberculosis KZN 1435]
gi|289418828|gb|EFD16029.1| dehydrogenase/reductase [Mycobacterium tuberculosis CPHL_A]
gi|289437215|gb|EFD19708.1| dehydrogenase/reductase [Mycobacterium tuberculosis KZN 605]
gi|289537348|gb|EFD41926.1| dehydrogenase/reductase [Mycobacterium tuberculosis K85]
gi|289688628|gb|EFD56116.1| dehydrogenase/reductase [Mycobacterium tuberculosis 02_1987]
gi|289707946|gb|EFD71962.1| conserved hypothetical protein [Mycobacterium tuberculosis GM
1503]
gi|289711959|gb|EFD75971.1| dehydrogenase/reductase [Mycobacterium tuberculosis T85]
gi|298493602|gb|EFI28896.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|308217018|gb|EFO76417.1| dehydrogenase/reductase [Mycobacterium tuberculosis SUMu001]
gi|308327880|gb|EFP16731.1| dehydrogenase/reductase [Mycobacterium tuberculosis SUMu002]
gi|308332237|gb|EFP21088.1| dehydrogenase/reductase [Mycobacterium tuberculosis SUMu003]
gi|308336001|gb|EFP24852.1| dehydrogenase/reductase [Mycobacterium tuberculosis SUMu004]
gi|308339621|gb|EFP28472.1| dehydrogenase/reductase [Mycobacterium tuberculosis SUMu005]
gi|308343530|gb|EFP32381.1| dehydrogenase/reductase [Mycobacterium tuberculosis SUMu006]
gi|308347393|gb|EFP36244.1| dehydrogenase/reductase [Mycobacterium tuberculosis SUMu007]
gi|308351320|gb|EFP40171.1| dehydrogenase/reductase [Mycobacterium tuberculosis SUMu008]
gi|308355968|gb|EFP44819.1| dehydrogenase/reductase [Mycobacterium tuberculosis SUMu009]
gi|308359925|gb|EFP48776.1| dehydrogenase/reductase [Mycobacterium tuberculosis SUMu010]
gi|308363824|gb|EFP52675.1| dehydrogenase/reductase [Mycobacterium tuberculosis SUMu011]
gi|308367477|gb|EFP56328.1| dehydrogenase/reductase [Mycobacterium tuberculosis SUMu012]
gi|326906084|gb|EGE53017.1| dehydrogenase/reductase [Mycobacterium tuberculosis W-148]
gi|328457044|gb|AEB02467.1| dehydrogenase/reductase [Mycobacterium tuberculosis KZN 4207]
Length = 388
Score = 38.0 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVAD 46
+ ++LI +G+GGL +R L+P I + D
Sbjct: 1 MSKTVLILGAGVGGLTTADTLRQLLPPEDRIILVD 35
>gi|299783004|gb|ADJ41002.1| Glutamate racemase [Lactobacillus fermentum CECT 5716]
Length = 67
Score = 38.0 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 5/49 (10%), Positives = 15/49 (30%)
Query: 219 WLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPDIAMRRLMQGF 267
+D + A+ L + ++ L+ +G + +
Sbjct: 3 LVDPAKETVATAKSWLEQHQAMGNHAHPNYHLYSTGNLPDLRAGVNKWL 51
>gi|215429154|ref|ZP_03427073.1| dehydrogenase/reductase [Mycobacterium tuberculosis EAS054]
gi|219556140|ref|ZP_03535216.1| dehydrogenase/reductase [Mycobacterium tuberculosis T17]
gi|260199331|ref|ZP_05766822.1| dehydrogenase/reductase [Mycobacterium tuberculosis T46]
gi|289441711|ref|ZP_06431455.1| dehydrogenase/reductase [Mycobacterium tuberculosis T46]
gi|289568242|ref|ZP_06448469.1| dehydrogenase/reductase [Mycobacterium tuberculosis T17]
gi|289752361|ref|ZP_06511739.1| dehydrogenase/reductase [Mycobacterium tuberculosis EAS054]
gi|289414630|gb|EFD11870.1| dehydrogenase/reductase [Mycobacterium tuberculosis T46]
gi|289541995|gb|EFD45644.1| dehydrogenase/reductase [Mycobacterium tuberculosis T17]
gi|289692948|gb|EFD60377.1| dehydrogenase/reductase [Mycobacterium tuberculosis EAS054]
Length = 388
Score = 38.0 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVAD 46
+ ++LI +G+GGL +R L+P I + D
Sbjct: 1 MSKTVLILGAGVGGLTTADTLRQLLPPEDRIILVD 35
>gi|86156956|ref|YP_463741.1| aspartate racemase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85773467|gb|ABC80304.1| Aspartate racemase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 234
Score = 38.0 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 54/173 (31%), Gaps = 10/173 (5%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L++ L++ A T + LR P + V A ++ ++ T
Sbjct: 70 RRLERAGATLALFAAVTPHRFL-AALRPRSP-LPIADLVGATCDDVRAAGHRVVGLVGTR 127
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
T+ + + + + + + + K E+K E+ G
Sbjct: 128 FTVSEPFFREALEAAGVRVVVPDEAGTDYLDALIFGPLARGEKTPEMKGELAAIVGRMAG 187
Query: 190 KRT-DVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQ 241
+ D +V+ACT L V LD DS R A +L
Sbjct: 188 RAPLDALVVACT-------DLMDLMGTEVRLLDPIDSHLRLALRMLGSSGARA 233
>gi|197120977|ref|YP_002132928.1| aspartate racemase [Anaeromyxobacter sp. K]
gi|196170826|gb|ACG71799.1| aspartate racemase [Anaeromyxobacter sp. K]
Length = 234
Score = 38.0 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 55/170 (32%), Gaps = 10/170 (5%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
L++ L++ A T + LR P + V A + ++ ++ T
Sbjct: 70 RRLERAGATLALFAAVTPHRFL-PALRPRSP-LPIADLVGATCEDVRAAGHRVVGLVGTR 127
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEK-E 188
T+ + + + + + + + + K ++ E+
Sbjct: 128 FTVSEPFFRDALEAAGVRVVVPDEAGTDDLDALIFGPLARGEKTPAMQGELAAIVSRMAR 187
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRIN 238
+ D +V+ACT L V LD DS R A +LP
Sbjct: 188 REPLDALVVACT-------DLMDLMGTEVPLLDPIDSHLRLALRMLPASG 230
>gi|224023771|ref|ZP_03642137.1| hypothetical protein BACCOPRO_00487 [Bacteroides coprophilus DSM
18228]
gi|224016993|gb|EEF75005.1| hypothetical protein BACCOPRO_00487 [Bacteroides coprophilus DSM
18228]
Length = 971
Score = 38.0 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 13/103 (12%), Positives = 29/103 (28%), Gaps = 1/103 (0%)
Query: 155 SMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSP 214
I E + I KE ++ E + + + + +
Sbjct: 711 GSIFHDAAEHIYKDLTAHGKVINKEAIETLLKDEVRLQEYVDNGFKKLFFNIPKEERAEY 770
Query: 215 WPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSGKPD 257
+ ++++ R + LL + F F+S D
Sbjct: 771 NGIQLINSAVIT-RYLKQLLENDLRYAPFTFSGSEHFVSEDID 812
>gi|301596772|ref|ZP_07241780.1| glutamate racemase [Acinetobacter baumannii AB059]
Length = 37
Score = 38.0 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 13 QNSILIFDSGIGGLI 27
I IFDSGIGG+
Sbjct: 20 DAPIGIFDSGIGGMS 34
>gi|169840382|ref|ZP_02873570.1| hypothetical protein cdivTM_25134 [candidate division TM7
single-cell isolate TM7a]
Length = 52
Score = 37.3 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 5/45 (11%), Positives = 15/45 (33%), Gaps = 1/45 (2%)
Query: 202 YPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVFD 246
L+ ++ P + +D + A + +L + +
Sbjct: 4 LSLLKDAISKIYPD-IKIVDPAKETALDLKEILEQNEFLKNDAKK 47
>gi|310794890|gb|EFQ30351.1| Asp/Glu/Hydantoin racemase [Glomerella graminicola M1.001]
Length = 261
Score = 36.9 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 25/176 (14%), Positives = 51/176 (28%), Gaps = 9/176 (5%)
Query: 70 DILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILSTP 129
D + + +I C + L+ LR A+++A G I++T
Sbjct: 71 DYISSHTLDGVLICCFSNHPLVSA-LRKRVTIPVTGIFQAALQEATQ--HGGKFGIVTTA 127
Query: 130 ATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKEG 189
R T ++ + + ++ I +E + + + I
Sbjct: 128 WAWERPLTDSVSELGFRRNSAGVAATGIGPLELEI------LDREVVINRIATFSKALID 181
Query: 190 KRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRVF 245
K I+L C + P + +D + R L +T
Sbjct: 182 KGAQSIILGCAGMTALEEDILAALPPGIRTVDGVRAGIRILSRLAEETVIMETAPR 237
>gi|255019972|ref|ZP_05292046.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Acidithiobacillus caldus ATCC 51756]
gi|254970631|gb|EET28119.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Acidithiobacillus caldus ATCC 51756]
Length = 377
Score = 36.9 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 22 GIGGLIVLQKMRFLMPEYHFIYVA 45
G GGL ++ +R +P+ +A
Sbjct: 10 GFGGLTAVRHLRRQLPDAEIHLLA 33
>gi|254800697|sp|A9H2B4|Y188_GLUDA RecName: Full=UPF0317 protein GDI0188/Gdia_2258
Length = 279
Score = 36.5 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 20/71 (28%), Gaps = 6/71 (8%)
Query: 46 DDVGFPYGNWEDHALKKRLMF------LFSDILDKYQPVLSVIACNTAFTLIKDELRSTF 99
D PY N +++ Q + ++ + A + LR+
Sbjct: 5 DSARLPYFNASPAEVRRLCRAGESGPVTAGMAAGYIQANIVMLPASLADAFHEFCLRNPK 64
Query: 100 PSMAFLGAVPA 110
P + P
Sbjct: 65 PCPLVGMSRPG 75
>gi|209544399|ref|YP_002276628.1| hypothetical protein Gdia_2258 [Gluconacetobacter diazotrophicus
PAl 5]
gi|209532076|gb|ACI52013.1| protein of unknown function DUF1445 [Gluconacetobacter
diazotrophicus PAl 5]
Length = 279
Score = 36.5 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 20/71 (28%), Gaps = 6/71 (8%)
Query: 46 DDVGFPYGNWEDHALKKRLMF------LFSDILDKYQPVLSVIACNTAFTLIKDELRSTF 99
D PY N +++ Q + ++ + A + LR+
Sbjct: 5 DSARLPYFNASPAEVRRLCRAGESGPVTAGMAAGYIQANIVMLPASLADAFHEFCLRNPK 64
Query: 100 PSMAFLGAVPA 110
P + P
Sbjct: 65 PCPLVGMSRPG 75
>gi|162146020|ref|YP_001600478.1| hypothetical protein GDI_0188 [Gluconacetobacter diazotrophicus PAl
5]
gi|161784594|emb|CAP54131.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 282
Score = 36.5 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 10/71 (14%), Positives = 20/71 (28%), Gaps = 6/71 (8%)
Query: 46 DDVGFPYGNWEDHALKKRLMF------LFSDILDKYQPVLSVIACNTAFTLIKDELRSTF 99
D PY N +++ Q + ++ + A + LR+
Sbjct: 8 DSARLPYFNASPAEVRRLCRAGESGPVTAGMAAGYIQANIVMLPASLADAFHEFCLRNPK 67
Query: 100 PSMAFLGAVPA 110
P + P
Sbjct: 68 PCPLVGMSRPG 78
>gi|83682417|emb|CAJ31330.1| glutamate racemase [Helicobacter pylori]
gi|83682419|emb|CAJ31333.1| glutamate racemase [Helicobacter pylori]
Length = 73
Score = 36.5 bits (83), Expect = 4.1, Method: Composition-based stats.
Identities = 11/73 (15%), Positives = 19/73 (26%), Gaps = 8/73 (10%)
Query: 201 HYPLIVHVFRQL------SPWPVDWLDNSDSIARRARCLLPRINTHQTRVFDDHALFLSG 254
H+PLI P P + + D+I + F SG
Sbjct: 1 HFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVEYLQQ--KYTLKKNAHAFPKVEFHASG 58
Query: 255 KPDIAMRRLMQGF 267
++ +
Sbjct: 59 DVIWLEKQAKEWL 71
>gi|261211175|ref|ZP_05925464.1| sulfide-quinone reductase [Vibrio sp. RC341]
gi|260839676|gb|EEX66287.1| sulfide-quinone reductase [Vibrio sp. RC341]
Length = 418
Score = 36.5 bits (83), Expect = 4.3, Method: Composition-based stats.
Identities = 23/166 (13%), Positives = 41/166 (24%), Gaps = 25/166 (15%)
Query: 22 GIGGLIVLQKMRFLMP-EYHFIYVADDVG--------FPY---GNWEDHALKKRLMFLFS 69
G+GG+ V+ ++R +P ++ I + + P+ G + L
Sbjct: 5 GLGGMSVVYELRQKLPKDHEVILI--NEHNEFHFIPSNPWVALGERTKEQVVLDLTPYAK 62
Query: 70 DILDKYQPVLS--------VIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSG 121
+ P + D L VP YTQS
Sbjct: 63 KFKIPFNPSGVTQILPDEKTLLAGDGTHYSYDYLVICTGPKLAFETVPGAGPETGYTQSI 122
Query: 122 LISILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYAC 167
+ A LI + + + E
Sbjct: 123 CTVDHAVKAY---EAYQALIENPGPVLVGAMQGASCFGPAYEYILT 165
>gi|45357972|ref|NP_987529.1| glucose-methanol-choline oxidoreductase [Methanococcus
maripaludis S2]
gi|44920729|emb|CAF29965.1| conserved hypothetical archaeal protein [Methanococcus
maripaludis S2]
Length = 386
Score = 36.5 bits (83), Expect = 4.4, Method: Composition-based stats.
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 16 ILIFDSGIGGLIVLQKMRFLMPEYHF 41
I++ SG+GG V ++++ P +
Sbjct: 4 IIVIGSGVGGSTVFKELKEAFPNQNI 29
>gi|85373302|ref|YP_457364.1| aspartate racemase [Erythrobacter litoralis HTCC2594]
gi|84786385|gb|ABC62567.1| Aspartate racemase [Erythrobacter litoralis HTCC2594]
Length = 225
Score = 36.5 bits (83), Expect = 4.6, Method: Composition-based stats.
Identities = 24/155 (15%), Positives = 52/155 (33%), Gaps = 6/155 (3%)
Query: 69 SDILDKYQPVLSVIACNTAFTLIKDELRSTFPSMAFLGAVPAIKQAAAYTQSGLISILST 128
+ L++ VI N + + S+ L + + + +IL T
Sbjct: 63 ARRLEQAGAEGIVITANAMHRVYDKLV--DAVSIEVLHIADSTGERMQAKGASDAAILGT 120
Query: 129 PATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCFIEKE 188
A + ++ + S+ ++ R+ + K + ++ ++ E
Sbjct: 121 KAVMTESFFRKRLVSHGVDLLPPEMAHAEQLERLISQELKLGKKTRDAERTLKSMITWYE 180
Query: 189 GKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNS 223
IVLACT L+V + + P D +
Sbjct: 181 QHGAKAIVLACTELELVVDIDANVLP----IYDTA 211
>gi|300023778|ref|YP_003756389.1| response regulator receiver protein [Hyphomicrobium denitrificans
ATCC 51888]
gi|299525599|gb|ADJ24068.1| response regulator receiver protein [Hyphomicrobium denitrificans
ATCC 51888]
Length = 144
Score = 36.1 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 10/30 (33%)
Query: 21 SGIGGLIVLQKMRFLMPEYHFIYVADDVGF 50
SG GG V + +R P I
Sbjct: 68 SGAGGFAVARWIRDNRPNIDVILAGSPKRA 97
>gi|54027045|ref|YP_121287.1| putative ferredoxin reductase [Nocardia farcinica IFM 10152]
gi|54018553|dbj|BAD59923.1| putative ferredoxin reductase [Nocardia farcinica IFM 10152]
Length = 407
Score = 36.1 bits (82), Expect = 5.5, Method: Composition-based stats.
Identities = 10/46 (21%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 12 LQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYVADDVGFPYGNWED 57
+ I+I +G+ GL +++R E + + D+ PY +
Sbjct: 10 MSAPIVIVGAGLAGLRTAEELRRAGYEGDLVLLGDEARLPY-DRPP 54
>gi|294650993|ref|ZP_06728333.1| rubredoxin-NAD(+) reductase [Acinetobacter haemolyticus ATCC
19194]
gi|292823094|gb|EFF81957.1| rubredoxin-NAD(+) reductase [Acinetobacter haemolyticus ATCC
19194]
Length = 398
Score = 36.1 bits (82), Expect = 5.6, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 24/63 (38%), Gaps = 14/63 (22%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYV-AD-----------DVGFPYGNWED 57
+ L + I+I SG+ G V ++ R L PE + + D + GN
Sbjct: 3 ENLMHPIVIIGSGMAGYTVAREFRKLSPEQELVMICGDDAVNYAKPTLSNAFA--GNKAP 60
Query: 58 HAL 60
+
Sbjct: 61 EQI 63
>gi|226951469|ref|ZP_03821933.1| rubredoxin reductase [Acinetobacter sp. ATCC 27244]
gi|226837762|gb|EEH70145.1| rubredoxin reductase [Acinetobacter sp. ATCC 27244]
Length = 398
Score = 36.1 bits (82), Expect = 5.6, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 24/63 (38%), Gaps = 14/63 (22%)
Query: 10 KKLQNSILIFDSGIGGLIVLQKMRFLMPEYHFIYV-AD-----------DVGFPYGNWED 57
+ L + I+I SG+ G V ++ R L PE + + D + GN
Sbjct: 3 ENLMHPIVIIGSGMAGYTVAREFRKLSPEQELVMICGDDAVNYAKPTLSNAFA--GNKAP 60
Query: 58 HAL 60
+
Sbjct: 61 EQI 63
>gi|333000919|gb|EGK20489.1| aspartate racemase [Shigella flexneri K-272]
gi|333015580|gb|EGK34919.1| aspartate racemase [Shigella flexneri K-227]
Length = 111
Score = 35.7 bits (81), Expect = 7.8, Method: Composition-based stats.
Identities = 15/109 (13%), Positives = 33/109 (30%), Gaps = 5/109 (4%)
Query: 123 ISILSTPATLRRTYTS-NLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIE 181
+++L T T+ + + L + C I +++ + +
Sbjct: 1 MALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQIIFEELCLGQFTEASCAYYA 60
Query: 182 GCFIEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRA 230
+ ++ CT L+V R + P D + A A
Sbjct: 61 QVIARLAEQGAQGVIFGCTEIGLLVPEERSVLP----VFDTAAIHAEDA 105
>gi|32566029|ref|NP_502553.2| Cleavage and Polyadenylation Specificity Factor family member
(cpsf-3) [Caenorhabditis elegans]
gi|26985920|emb|CAC44310.2| C. elegans protein Y67H2A.1, confirmed by transcript evidence
[Caenorhabditis elegans]
Length = 707
Score = 35.3 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 46/147 (31%), Gaps = 9/147 (6%)
Query: 125 ILSTPATLRRTYTSNLIHSYVSQCHIHLVSSMILASRVEEYACGIKIKEDEIKKEIEGCF 184
+L+TP L+ ++ L S+ +I VE + E E + G
Sbjct: 326 VLATPGMLQSGFSRELFESWCPDTK---NGCIIAGYCVEGTLAKHILSEPEEIVSLSGEK 382
Query: 185 IEKEGKRTDVIVLACTHYPLIVHVFRQLSPWPVDWLDNSDSIARRARCLLPRINTHQTRV 244
+ + V A T Y + + L P + + R + + R
Sbjct: 383 LPMRMQVGYVSFSAHTDYHQTSNFVKALKPPHLVLVHGELHEMSRLKSGIERQFQDDNIP 442
Query: 245 FDDHALFLSGKPDIAMRRLMQGFGLKS 271
+ H P R +Q G K+
Sbjct: 443 IEVH------NPRNTERLQLQFRGEKT 463
>gi|13358862|dbj|BAB33292.1| rubredoxin reductase [Acinetobacter sp. M-1]
Length = 393
Score = 35.3 bits (80), Expect = 8.2, Method: Composition-based stats.
Identities = 17/86 (19%), Positives = 30/86 (34%), Gaps = 15/86 (17%)
Query: 14 NSILIFDSGIGGLIVLQKMRFLMPEYHFIYV-AD-----------DVGFPYGNWEDHALK 61
+ I+I SG+ G V ++ R L PE + + AD + GN +
Sbjct: 2 HPIVIIGSGMAGYTVAREFRKLSPEQELVMICADDAVNYAKPTLSNAFA--GNKAPEQIA 59
Query: 62 -KRLMFLFSDILDKYQPVLSVIACNT 86
+ + + + V A N
Sbjct: 60 LGDATKMATQLNMRIDADTWVKAINA 85
>gi|251779931|ref|ZP_04822851.1| phytoene dehydrogenase family protein [Clostridium botulinum E1
str. 'BoNT E Beluga']
gi|243084246|gb|EES50136.1| phytoene dehydrogenase family protein [Clostridium botulinum E1
str. 'BoNT E Beluga']
Length = 498
Score = 35.3 bits (80), Expect = 9.7, Method: Composition-based stats.
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 12 LQNSILIFDSGIGGLIVLQKMR 33
+ I++ SG+GGL V ++
Sbjct: 1 MNKKIIVIGSGVGGLSVAARLL 22
>gi|188588566|ref|YP_001921057.1| phytoene dehydrogenase family protein [Clostridium botulinum E3
str. Alaska E43]
gi|188498847|gb|ACD51983.1| phytoene dehydrogenase family protein [Clostridium botulinum E3
str. Alaska E43]
Length = 497
Score = 35.3 bits (80), Expect = 9.9, Method: Composition-based stats.
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 12 LQNSILIFDSGIGGLIVLQKMR 33
+ I++ SG+GGL V ++
Sbjct: 1 MNKKIIVIGSGVGGLSVAARLL 22
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.314 0.143 0.411
Lambda K H
0.267 0.0436 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,066,187,401
Number of Sequences: 14124377
Number of extensions: 102521642
Number of successful extensions: 375958
Number of sequences better than 10.0: 2848
Number of HSP's better than 10.0 without gapping: 2318
Number of HSP's successfully gapped in prelim test: 530
Number of HSP's that attempted gapping in prelim test: 367014
Number of HSP's gapped (non-prelim): 2884
length of query: 271
length of database: 4,842,793,630
effective HSP length: 137
effective length of query: 134
effective length of database: 2,907,753,981
effective search space: 389639033454
effective search space used: 389639033454
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (20.9 bits)
S2: 80 (35.3 bits)