BLAST/PSIBLAST alignment of GI: 254780909 and GI: 71756179 at iteration 2
>gi|71756179|ref|XP_829004.1| hypothetical protein [Trypanosoma brucei TREU927] Length = 887
>gi|70834390|gb|EAN79892.1| hypothetical protein, conserved [Trypanosoma brucei] Length = 887
 Score = 44.9 bits (104), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 12/119 (10%)

Query: 50  AAEKAAEAARKAAEQAAEAAKKAAEKIIHKD----KKKPKENQEVNEVPVAANIEPESQE 105
            A K AE     ++Q +E AK+A  + I  +     +KP + ++ NE    A  +P++ +
Sbjct: 735 GAAKEAETEEIGSKQISETAKEADTEEIDSEWTSEARKPSDTEDANEKTSEAAKDPDNDD 794

Query: 106 TQQQVINKTTTSQTDAEKTPNE------KRQGTTDGINNQSNATNDPSSKDKIAENTKE 158
           T+ +    +  ++ DAE+  ++      KR GT       S A  DP ++D  ++ T E
Sbjct: 795 TESK--QTSEAAKVDAEEIGSDQASEAMKRSGTEGASERTSEAAKDPDTEDTESKQTSE 851