HHsearch alignment for GI: 254780911 and conserved domain: cd00887
>cd00887 MoeA MoeA family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF), an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MoeA, together with MoaB, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes.
Probab=90.02 E-value=1.6 Score=24.44 Aligned_cols=102 Identities=10% Similarity=0.107 Sum_probs=68.0
Q ss_pred CCCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEEEEECCHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 44565538999708867989999862046741589999977346677788609974741687335277678999997333
Q gi|254780911|r 79 NTKEATKTLILVSQPDHCLNDLLYRWNIGTLALNIVGVVSNHTTHKKLVENYQLPFYYLPMTEQNKIESEQKLINIIEKN 158 (288)
Q Consensus 79 ~~~~~~riailvSg~gsnL~~Ll~~~~~g~L~~eI~~VISN~~d~~~lA~~~gIP~~~i~~~~~~k~~~e~~il~~l~~~ 158 (288)
T Consensus 164 ~V~~~prV~iisTGdEL-----v~---~~~~~~~g~i~dsN~~~L~a~l~~~G~~~~~~~~v~Dd~~~l~~~l~~a~~~- 234 (394)
T cd00887 164 PVYRRPRVAIISTGDEL-----VE---PGEPLAPGQIYDSNSYMLAALLRELGAEVVDLGIVPDDPEALREALEEALEE- 234 (394)
T ss_pred EEECCEEEEEEECCCCC-----CC---CCCCCCCCEEEECCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHC-
T ss_conf 99601389999623414-----28---8974899908735799999999978998999673189999999999976430-
Q ss_pred CCEEEEECCCCCC----CCHHHHHHCCCCEE----EECCC
Q ss_conf 9409998276754----88778632778479----61336
Q gi|254780911|r 159 NVELMILARYMQI----LSDHLCHKMTGRII----NIHHS 190 (288)
Q Consensus 159 ~~DlivLAgymri----l~~~~~~~~~~~ii----NiHps 190 (288)
T Consensus 235 -~DiiIttGG~S~G~~D~v~~~l~~lg~~~~f~~v~ikPG 273 (394)
T cd00887 235 -ADVVITSGGVSVGDYDFVKEVLEELGGEVLFHGVAMKPG 273 (394)
T ss_pred -CCEEEEECCCCCCCCCHHHHHHHHCCCEEEEEEEECCCC
T ss_conf -999999277426876339999997799899977413577