HHsearch alignment for GI: 254780911 and conserved domain: cd04900
>cd04900 ACT_UUR-like_1 ACT domain family, ACT_UUR-like_1, includes the first of two C-terminal ACT domains of the bacterial signal-transducing uridylyltransferase /uridylyl-removing (UUR) enzyme, GlnD and related domains. This ACT domain family, ACT_UUR-like_1, includes the first of two C-terminal ACT domains of the bacterial signal-transducing uridylyltransferase /uridylyl-removing (UUR) enzyme, GlnD; including those enzymes similar to the GlnD found in enteric Escherichia coli and those found in photosynthetic, nitrogen-fixing bacterium Rhodospirillum rubrum. Also included in this CD is the N-terminal ACT domain of a yet characterized Arabidopsis/Oryza predicted tyrosine kinase. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=96.20 E-value=0.025 Score=37.04 Aligned_cols=43 Identities=26% Similarity=0.330 Sum_probs=36.3
Q ss_pred EEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCC---CEEEEE
Q ss_conf 9998599876688899999857981897344432436---889999
Q gi|254780911|r 6 LTITCPSNEEITSIIPDYLSTQGCNILDISQFNDLDT---SKLFMR 48 (288)
Q Consensus 6 Lti~CpD~~GIVA~VT~~La~~g~NI~~~~Q~~D~~~---~~FFmR 48 (288)
T Consensus 4 i~v~~~Dr~gLf~~i~~~l~~~~l~I~~A~I~t~~~g~~~D~F~V~ 49 (73)
T cd04900 4 VFIYTPDRPGLFARIAGALDQLGLNILDARIFTTRDGYALDTFVVL 49 (73)
T ss_pred EEEEECCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCEEEEEEEEE
T ss_conf 9999689787899999999988985999999985898699999998