HHsearch results for GI: 254780911 and protein with PDBid: 3kcq_A
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural genomics center for infectious disease; 2.20A {Anaplasma phagocytophilum HZ}
Probab=100.00 E-value=0 Score=356.94 Aligned_cols=203 Identities=30% Similarity=0.435 Sum_probs=187.7
Q ss_pred CCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEEEEECCHHHHHH--HHHCCCCEEECCCCCCCHHHHHHHHHHHH
Q ss_conf 2445655389997088679899998620467415899999773466777--88609974741687335277678999997
Q gi|254780911|r 78 RNTKEATKTLILVSQPDHCLNDLLYRWNIGTLALNIVGVVSNHTTHKKL--VENYQLPFYYLPMTEQNKIESEQKLINII 155 (288)
Q Consensus 78 ~~~~~~~riailvSg~gsnL~~Ll~~~~~g~L~~eI~~VISN~~d~~~l--A~~~gIP~~~i~~~~~~k~~~e~~il~~l 155 (288)
.+..+++|+|||+||.||||++|+++++.+.++++|++||||+++++++ ++.+++|+.+++.... .+.++.+.|
T Consensus 3 ~~m~k~mkIavl~SG~Gsnl~aii~~~~~~~~~~eI~~VIsn~~~~~~l~~~~~~~i~~~~~~~~~~----~~~~~~~~l 78 (215)
T 3kcq_A 3 GSMKKELRVGVLISGRGSNLEALAKAFSTEESSVVISCVISNNAEARGLLIAQSYGIPTFVVKRKPL----DIEHISTVL 78 (215)
T ss_dssp ----CCEEEEEEESSCCHHHHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHTTCCEEECCBTTB----CHHHHHHHH
T ss_pred CCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHCCCCEEECCCCCC----CHHHHHHHH
T ss_conf 8889987899999398773999999977699883999999579641777677754998874266760----689999999
Q ss_pred HHCCCEEEEECCCCCCCCHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEEEEEEECCCCCCCEEEEEEEE
Q ss_conf 33394099982767548877863277847961336676789999589997426837622577530556888344444665
Q gi|254780911|r 156 EKNNVELMILARYMQILSDHLCHKMTGRIINIHHSFLPSFKGANPYKQAYEYGVKIIGATAHYAICELDAGPIIEQDVVR 235 (288)
Q Consensus 156 ~~~~~DlivLAgymril~~~~~~~~~~~iiNiHpslLP~f~G~~~y~~A~~~Gvk~~G~TvH~V~~~lD~GpII~Q~~~~ 235 (288)
+++++|++|+|||||||+++|++.|++++||+||||||+|+|++|+.+|+..|+|.+|||+|+|++++|+||||.|..++
T Consensus 79 ~~~~~Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~~rG~~~~~~ai~~g~~~tG~Tih~v~~~~D~G~Ii~q~~~~ 158 (215)
T 3kcq_A 79 REHDVDLVCLAGFMSILPEKFVTDWHHKIINIHPSLLPSFKGLNAQEQAYKAGVKIAGCTLHYVYQELDAGPIIMQAAVP 158 (215)
T ss_dssp HHTTCSEEEESSCCSCCCHHHHHHTTTSEEEEESSCTTTTCSSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEEEEEE
T ss_pred HHCCCCEEEEECCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEEEEE
T ss_conf 86599999990434207889975245665131885356679844077898779824275899970687689857899987
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEEECCCCCC
Q ss_conf 1888899999999999999999999999876917886885798088867
Q gi|254780911|r 236 VTHAQTIEDYIAIGKNIEAKVLTKAVNAHIQQRVFINKRKTIVFPAYPN 284 (288)
Q Consensus 236 v~~~dt~~~l~~~~~~~E~~~l~~av~~~~e~rv~~~~~ktvvf~~~~~ 284 (288)
|.++||.++|.+|++.+|+++|++++++++++++.+.+++++.-.+..+
T Consensus 159 I~~~dt~~~L~~r~~~~e~~l~~~~i~~i~~~~i~~~~q~~~~~t~~d~ 207 (215)
T 3kcq_A 159 VLREDTAESLASRILAAEHVCYPKGVKLIAQDKIKLCDDGTVQCTGEDE 207 (215)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECTTSCEEESSSCC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCEEECCCCC
T ss_conf 5999999999999999999999999999996994897799678068987