RPSBLAST alignment of GI: 254780911 and protein with PDBid: 1u8s
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5 Length = 192
Score = 40.9 bits (95), Expect = 3e-04
Identities = 22/174 (12%), Positives = 58/174 (33%), Gaps = 11/174 (6%)
Query: 1 MSSY-ILTITCPSNEEITSIIPDYLSTQGCNILDISQFNDLDTSKLFMRISFVFNTCMKL 59
++ + ++T I + + ++ GCNI+D L M IS + +
Sbjct: 3 LTQHLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISGSPSNITR- 61
Query: 60 FIADFQPIVQQFSLQYSIRNT----KEATKTLILVSQPDHCLNDLLYRWNIGTLALNIVG 115
+ QQ L ++ T + + V L ++ I
Sbjct: 62 VETTLPLLGQQHDLITMMKRTSPHDHQTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGM 121
Query: 116 VVSNHTTHKKLVENYQLPFYYLPMT-----EQNKIESEQKLINIIEKNNVELMI 164
+ T K + + +++ ++ N ++ +++ + +V+ +
Sbjct: 122 ASLSAQTISKDKLHSEQNQFHIAISARVDSGCNLMQLQEEFDALCTALDVQGSL 175