RPSBLAST alignment of GI: 254780911 and protein with PDBid: 3obi
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.95A {Rhodopseudomonas palustris} Length = 288
Score = 229 bits (584), Expect = 7e-61
Identities = 118/281 (41%), Positives = 176/281 (62%), Gaps = 4/281 (1%)
Query: 3 SYILTITCPSNEEITSIIPDYLSTQGCNILDISQFNDLDTSKLFMRISFVFNTC---MKL 59
Y+LT++CP I S + +L G NILD Q+ND ++ FMR+ F +
Sbjct: 6 QYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAAAKVIPLAS 65
Query: 60 FIADFQPIVQQFSLQYSIRNTKEATKTLILVSQPDHCLNDLLYRWNIGTLALNIVGVVSN 119
F I +F++ + +R+ + K ++LVSQ DHCL D+LYRW +G L + +VSN
Sbjct: 66 LRTGFGVIAAKFTMGWHMRDRETRRKVMLLVSQSDHCLADILYRWRVGDLHMIPTAIVSN 125
Query: 120 HTTHKKLVENYQ-LPFYYLPMTEQNKIESEQKLINIIEKNNVELMILARYMQILSDHLCH 178
H ++ +PFY+ P+ + + + E + +I + + +L++LARYMQILSD +
Sbjct: 126 HPRETFSGFDFGDIPFYHFPVNKDTRRQQEAAITALIAQTHTDLVVLARYMQILSDEMSA 185
Query: 179 KMTGRIINIHHSFLPSFKGANPYKQAYEYGVKIIGATAHYAICELDAGPIIEQDVVRVTH 238
++ GR INIHHSFLP FKGA PY QA++ GVK+IGATAHY LD GPII+QDV R++H
Sbjct: 186 RLAGRCINIHHSFLPGFKGAKPYHQAFDRGVKLIGATAHYVTSALDEGPIIDQDVERISH 245
Query: 239 AQTIEDYIAIGKNIEAKVLTKAVNAHIQQRVFINKRKTIVF 279
T D + G++IE +VL++A++ H+ RV +N RKT+VF
Sbjct: 246 RDTPADLVRKGRDIERRVLSRALHYHLDDRVILNGRKTVVF 286