HHsearch alignment for GI: 254780913 and conserved domain: COG1158

>COG1158 Rho Transcription termination factor [Transcription].
Probab=90.18  E-value=0.27  Score=28.16  Aligned_cols=51  Identities=24%  Similarity=0.438  Sum_probs=36.0

Q ss_pred             CCCEEEEEECC--CCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCC-CCCC
Q ss_conf             88746588548--8778837999950002358844689988999999869997-1110
Q gi|254780913|r   13 DKGYGFITPEG--STESGDDVFLHRSAVASAGLFNLTEGQLVTYDYVQNDANG-KYSA   67 (78)
Q Consensus        13 ~kGfGFI~~d~--~~d~g~DvFvH~s~i~~~g~~~l~~G~~V~F~i~~~~~~g-k~~A   67 (78)
T Consensus        62 ~dGfGFLR~~~~~yl~~~~DiYvSpSQIRrf~---LrtGD~v~G~vR~-Pke~Ery~a  115 (422)
T COG1158          62 PDGFGFLRSADSSYLPGPDDIYVSPSQIRRFN---LRTGDTVEGKVRP-PKEGERYFA  115 (422)
T ss_pred             CCCCCEEECCCCCCCCCCCCEEECHHHHHHCC---CCCCCEEEEEECC-CCCCCCEEE
T ss_conf             67742440576455789776678789986506---7668877666448-876430000