HHsearch alignment for GI: 254780913 and conserved domain: COG1278
>COG1278 CspC Cold shock proteins [Transcription].
Probab=99.91 E-value=5.7e-25 Score=160.32 Aligned_cols=67 Identities=45% Similarity=0.830 Sum_probs=61.3
Q ss_pred CCCCEEEEEECCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEC
Q ss_conf 877627751468874658854887788379999500023588446899889999998699971110599963
Q gi|254780913|r 2 VHRGSIKWYNPDKGYGFITPEGSTESGDDVFLHRSAVASAGLFNLTEGQLVTYDYVQNDANGKYSAENLKLV 73 (78)
Q Consensus 2 m~~G~VKwfn~~kGfGFI~~d~~~d~g~DvFvH~s~i~~~g~~~l~~G~~V~F~i~~~~~~gk~~A~~v~~i 73 (78)
T Consensus 1 ~~~GtVKwfn~~KGfGFI~p~---~G~~DvFVH~Sai~~~g~~~L~eGQ~V~f~~~~g~kg--p~A~nv~~~ 67 (67)
T COG1278 1 MATGTVKWFNATKGFGFITPE---DGGKDVFVHISAIQRAGFRTLREGQKVEFEVEQGRKG--PSAANVRAL 67 (67)
T ss_pred CCCCEEEEEECCCCCEEECCC---CCCCCEEEEEEEECCCCCCCCCCCCEEEEEEECCCCC--CCEEEEEEC
T ss_conf 986168885089863370789---9985779980125127886557998899999528999--722678829