HHsearch alignment for GI: 254780913 and conserved domain: PRK12608

>PRK12608 transcription termination factor Rho; Provisional.
Probab=92.22  E-value=0.18  Score=29.16  Aligned_cols=56  Identities=25%  Similarity=0.389  Sum_probs=37.1

Q ss_pred             CCCEEEEEEC--CCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEC
Q ss_conf             8874658854--887788379999500023588446899889999998699971110599963
Q gi|254780913|r   13 DKGYGFITPE--GSTESGDDVFLHRSAVASAGLFNLTEGQLVTYDYVQNDANGKYSAENLKLV   73 (78)
Q Consensus        13 ~kGfGFI~~d--~~~d~g~DvFvH~s~i~~~g~~~l~~G~~V~F~i~~~~~~gk~~A~~v~~i   73 (78)
T Consensus        26 ~dGyGFLR~~~~nYlp~pdDiYVS~sqIrrf~---LR~GD~V~G~iR~-p~~ge-aL~~V~~V   83 (379)
T PRK12608         26 GKGFGFLRSPERNYLPSPDDVYVSPALIRRFG---LRTGDLVEGVIRA-PREKE-TLVRIDSV   83 (379)
T ss_pred             CCCCEEEECCCCCCCCCCCCEEECHHHHHHCC---CCCCCEEEEEECC-CCCCH-HHEEEHHC
T ss_conf             89975835898788999988100999997549---9999989998638-99874-20414523