HHsearch results for GI: 254780913 and protein with PDBid: 1h95_A

>1h95_A CSD, Y-box binding protein; translation factor, transcription factor, OB-fold, 5- stranded anti-parallel beta-barrel, single stranded DNA binding; NMR {Homo sapiens} SCOP: b.40.4.5

Probab=99.86  E-value=2.9e-22  Score=144.00  Aligned_cols=65  Identities=32%  Similarity=0.695  Sum_probs=56.9

Q ss_pred             CCCEEEEEECCCCEEEEEECCCCCCCCEEEEEEEECCCCC----CCCCCCCCEEEEEEEECCCCCCCCCEEEEE
Q ss_conf             7762775146887465885488778837999950002358----844689988999999869997111059996
Q gi|254780913|r    3 HRGSIKWYNPDKGYGFITPEGSTESGDDVFLHRSAVASAG----LFNLTEGQLVTYDYVQNDANGKYSAENLKL   72 (78)
Q Consensus         3 ~~G~VKwfn~~kGfGFI~~d~~~d~g~DvFvH~s~i~~~g----~~~l~~G~~V~F~i~~~~~~gk~~A~~v~~   72 (78)
                      .+|+|||||++||||||+||   |+++|||||+|+|+..+    ++.|.+||+|+|++.+++++  ++|.||+.
T Consensus         9 ~~G~VKwfn~~KGfGFI~~d---dg~~DvFvH~s~i~~~~~~~~~~~L~~G~~V~f~~~~~~~g--~~A~~Vtg   77 (79)
T 1h95_A            9 VLGTVKWFNVRNGYGFINRN---DTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKG--AEAANVTG   77 (79)
T ss_dssp             EEEEEEEEETTTTEEEEEEG---GGTEEEEEEGGGBCSCCCSCCSCSCCSSCEEEEEEEECSSS--EEEESBCC
T ss_pred             EEEEEEEEECCCCCEEEEEC---CCCEEEEEEHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCC--CEEEEEEC
T ss_conf             24899999689991899858---99704999969930479743334179999999999989999--88699777