HHsearch results for GI: 254780913 and protein with PDBid: 2kcm_A
>2kcm_A Cold shock domain family protein; nucleic acid binding protein, beta barrel, structural genomics, PSI-2, protein structure initiative; NMR {Shewanella oneidensis mr-1}
Probab=99.80 E-value=3.2e-20 Score=132.58 Aligned_cols=65 Identities=28% Similarity=0.466 Sum_probs=56.6
Q ss_pred CCEEEEEECCCCEEEEEECCCCCCCCEEEEEEEECC-CCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEECC
Q ss_conf 762775146887465885488778837999950002-35884468998899999986999711105999635
Q gi|254780913|r 4 RGSIKWYNPDKGYGFITPEGSTESGDDVFLHRSAVA-SAGLFNLTEGQLVTYDYVQNDANGKYSAENLKLVP 74 (78)
Q Consensus 4 ~G~VKwfn~~kGfGFI~~d~~~d~g~DvFvH~s~i~-~~g~~~l~~G~~V~F~i~~~~~~gk~~A~~v~~i~ 74 (78)
+|+|||||+.||||||++| +|+|||||+|+|. ..+++.|.+||+|+|++.+++++ ++|.+|++--
T Consensus 2 ~G~Vk~f~~~KGfGFI~~~----dg~DvFvH~s~l~~~~~~~~L~~G~~V~F~~~~~~kG--~~A~~V~lp~ 67 (74)
T 2kcm_A 2 KGKVVSYLAAKKYGFIQGD----DGESYFLHFSELLDKKDEGKLVKGSMVHFDPTPTPKG--LAAKAISLPL 67 (74)
T ss_dssp EEEEEEEETTTTEEEEEET----TSCEECCCGGGSSCSGGGTTCCTTSEEEEEEECTTTS--CEEEEEECCS
T ss_pred EEEEEEEECCCCEEEEECC----CCCEEEEEEEHHCCCCCCCCCCCCCEEEEEEEECCCC--CEEEEEEEEE
T ss_conf 3799999799987388659----9988999940523546886369999999999989999--6748999720