HHsearch results for GI: 254780913 and protein with PDBid: 2ytx_A
>2ytx_A Cold shock domain-containing protein E1; cell-free protein synthesis, beta-barrel, translational REGU RNA chaperone, RNA/DNA binding, QB fold; NMR {Homo sapiens}
Probab=99.74 E-value=1.4e-18 Score=123.36 Aligned_cols=69 Identities=25% Similarity=0.454 Sum_probs=59.3
Q ss_pred CCCCCEEEEEECCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCC
Q ss_conf 98776277514688746588548877883799995000235884468998899999986999711105999635788
Q gi|254780913|r 1 MVHRGSIKWYNPDKGYGFITPEGSTESGDDVFLHRSAVASAGLFNLTEGQLVTYDYVQNDANGKYSAENLKLVPKSS 77 (78)
Q Consensus 1 mm~~G~VKwfn~~kGfGFI~~d~~~d~g~DvFvH~s~i~~~g~~~l~~G~~V~F~i~~~~~~gk~~A~~v~~i~~~~ 77 (78)
|+.+|+|+||+ +|||||+++ ++++|||||+|+|.. +++.|.+|++|+|++.++ .++++|.+|++|+.++
T Consensus 17 ~r~~G~I~~~k--~GfGFI~~~---~g~~diFfH~s~~~~-~~~~l~~G~~V~F~~~~~--~~~~~A~~V~~l~~g~ 85 (97)
T 2ytx_A 17 ARCQGVVCAMK--EAFGFIERG---DVVKEIFFHYSEFKG-DLETLQPGDDVEFTIKDR--NGKEVATDVRLLPQGT 85 (97)
T ss_dssp CCEEEEECCCC--SSEEEEECS---SSCCCEEEETTTCCS-CTTSCCSCCEEEEEECCC--SSSCBEEEEEECCCSS
T ss_pred CEEEEEEEEEE--CCEEEEEEC---CCCCCEEEEEHHHHC-CCCCCCCCCEEEEEEEEC--CCCCEEEEEEECCCCC
T ss_conf 37889998993--818189718---999519999478506-666488999999999938--9997888879989997