HHsearch results for GI: 254780913 and protein with PDBid: 3a0j_A

>3a0j_A Cold shock protein; OB-fold, cytoplasm, transcription, structural genomics, NPPSFA; 1.65A {Thermus thermophilus}

Probab=99.90  E-value=4.8e-24  Score=153.93  Aligned_cols=72  Identities=36%  Similarity=0.714  Sum_probs=63.3

Q ss_pred             CCCCEEEEEECCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCC
Q ss_conf             8776277514688746588548877883799995000235884468998899999986999711105999635788
Q gi|254780913|r    2 VHRGSIKWYNPDKGYGFITPEGSTESGDDVFLHRSAVASAGLFNLTEGQLVTYDYVQNDANGKYSAENLKLVPKSS   77 (78)
Q Consensus         2 m~~G~VKwfn~~kGfGFI~~d~~~d~g~DvFvH~s~i~~~g~~~l~~G~~V~F~i~~~~~~gk~~A~~v~~i~~~~   77 (78)
                      |++|+|||||++||||||++|    +++|||||+|+|+..+++.|.+||+|+|++.+++.+..++|.+|++|.++.
T Consensus         1 M~~G~Vkwf~~~kGfGFI~~d----~g~dvFvH~s~i~~~g~~~l~~G~~V~f~~~~~~~~kg~~A~~V~~v~~a~   72 (73)
T 3a0j_A            1 MQKGRVKWFNAEKGYGFIERE----GDTDVFVHYTAINAKGFRTLNEGDIVTFDVEPGRNGKGPQAVNVTVVEPAR   72 (73)
T ss_dssp             CEEEEEEEEETTTTEEEEECT----TSCCEEEEGGGBCSSSCSSCCTTCEEEEEEECCSCCSSSEEEEEEEEECCC
T ss_pred             CCCEEEEEEECCCCEEEECCC----CCCEEEEEEHHHCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCC
T ss_conf             998399989299984783158----997099984775523698789999999999989999887588888615789