HHsearch results for GI: 254780913 and protein with PDBid: 3ice_A
>3ice_A Transcription termination factor RHO; transcription, ATPase, hexamer, helicase, RNA, RECA, OB fold, motor, ATP-binding, hydrolase; HET: MSE ADP SPD; 2.80A {Escherichia coli k-12} PDB: 1pv4_A 1pvo_A* 1xpo_A* 1xpr_A* 1xpu_A* 2ht1_A
Probab=93.10 E-value=0.062 Score=30.53 Aligned_cols=58 Identities=19% Similarity=0.376 Sum_probs=39.4
Q ss_pred CCCEEEEEE--CCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCC-EEEEEC
Q ss_conf 887465885--4887788379999500023588446899889999998699971110-599963
Q gi|254780913|r 13 DKGYGFITP--EGSTESGDDVFLHRSAVASAGLFNLTEGQLVTYDYVQNDANGKYSA-ENLKLV 73 (78)
Q Consensus 13 ~kGfGFI~~--d~~~d~g~DvFvH~s~i~~~g~~~l~~G~~V~F~i~~~~~~gk~~A-~~v~~i 73 (78)
..||||+.. .+...+..||||..+-|+..+ |+.|+.|.-.+..-..+.++-| ..|..+
T Consensus 62 ~dg~Gflr~~~~~y~~~~~DiyVs~~~ir~~~---Lr~Gd~v~G~~r~~~~~e~~~~l~~V~~v 122 (422)
T 3ice_A 62 QDGFGFLRSADSSYLAGPDDIYVSPSQIRRFN---LRTGDTISGKIRPPKEGERYFALLKVNEV 122 (422)
T ss_dssp TTSCEEEECGGGTTCCCTTCEEBCHHHHHHHT---CCTTCEEEEEEECCCSSCCSEEEEEEEEE
T ss_pred CCCCEEEECCCCCCCCCCCCEEECHHHHHHHC---CCCCCEEEEEEECCCCCCCCCCCEEEHHC
T ss_conf 89967852775588999988538989998808---88899899987478777777631342320