HHsearch results for GI: 254780915 and protein with PDBid: 1ka2_A
>1ka2_A M32 carboxypeptidase; hexxh motif, M32 family, metallopeptidase; 2.20A {Pyrococcus furiosus} SCOP: d.92.1.5 PDB: 1k9x_A 1ka4_A
Probab=99.90 E-value=2.9e-18 Score=146.78 Aligned_cols=336 Identities=17% Similarity=0.186 Sum_probs=227.6
Q ss_pred HHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHCCCCCHH-HHHHH--HCCCCHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf 7999999999986505-4216999999866678865427899988-97622--225898999999998763062899999
Q gi|254780915|r 237 VRKSAAKALSHTFNKS-SHIFSFITNTLAKDEEIQDRWRKYEKIA-DSRHL--SNNVEPYVIEALMQSVKNYYPKTSHRY 312 (626)
Q Consensus 237 ~Rk~a~~a~~~~~~~~-~~~~a~il~~iv~~r~e~A~llGy~s~~-~~~l~--~~~~~~~~~~~l~~~~~~~~~~~~~~~ 312 (626)
.+-.+..++.++-.++ -..+++.|.+++.++.+.|+.+|++... +.-|. ...++.+.++.++..++...+|+..+.
T Consensus 111 ~~s~~~~~W~~Ar~~nDf~~f~p~Lekli~L~re~A~~~~~~~~pYDaLLd~yE~g~t~~~ld~~F~~Lk~~L~pll~~i 190 (499)
T 1ka2_A 111 TTSLATKAWEEAKAKDDFSKFEPWLDKIISLAKRAAEYLGYEEEPYDALLDLYEEGLRTRDVEKMFEVLEKKLKPLLDKI 190 (499)
T ss_dssp HHHHHHHHHHHHHHTTCGGGTHHHHHHHHHHHHHHHHHHCCSSCHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 86268999999731035999999999999999999998277788555556632899989999999999898899999999
Q ss_pred HHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCC
Q ss_conf 99999870887531234440256554777998999999998666632899999998642485020103799874354766
Q gi|254780915|r 313 YELKKKWLKLDTMYFWDRLAPLPGTSQDIIPFEVARDLVLQSYAKFSPQMSIIAEKFFTHNWIDAPQYDGKGSGAFAHGT 392 (626)
Q Consensus 313 ~~~~~~~lg~~~l~~wD~~~~~~~~~~~~~~~ee~~~~v~~~~~~~~~e~~~~~~~~~~~~~iD~~~r~gKr~GA~~~~~ 392 (626)
....+ ... ........|+.+....+....+..+|.++. ..+ |-....+.||.++
T Consensus 191 ~~~~~----~~~---------~~~~~~~~f~~~~Q~~~~~~~~~~~Gfd~~-------~~G------Rld~s~HPF~~~~ 244 (499)
T 1ka2_A 191 LEEGK----VPR---------EHPLEKEKYEREWMERVNLWILQKFGFPLG-------TRA------RLDVSAHPFTTEF 244 (499)
T ss_dssp HHTTC----SCS---------CCGGGTCBCCHHHHHHHHHHHHHHHTCCBT-------TTE------EEEECSSCCEEEE
T ss_pred HHCCC----CCC---------CCCCCCCCCCHHHHHHHHHHHHHHCCCCCH-------HCC------EEEECCCCCCCCC
T ss_conf 85457----898---------772003578899999987999974487701-------133------1441366211368
Q ss_pred CCCCCCEEECCCCCC--HHHHHHHHHHHHHHHHHHHHC---CCCCCCCCCCHHHHHHHHHHHHHHHHH------HHH---
Q ss_conf 677751010365332--467999999845899999612---568776578005999886888999999------998---
Q gi|254780915|r 393 IPSVHPYILLNYLGK--PQDVMTLAHELGHGIHFVLSS---ETQGILTNNSSLTLAETASIFGETLTF------DSL--- 458 (626)
Q Consensus 393 ~~~~~~~I~~N~~~~--~~dv~TL~HE~GHa~H~~ls~---~~~~~~~~~~~~~~aE~~S~~~E~~~~------~~~--- 458 (626)
.+ ...+|..++..+ ...+....||.|||++-..-. ..+| .+...++-+.|.-|-|+|+.+. .+.
T Consensus 245 ~~-~DvRittr~~~~~~~~~l~s~iHE~GHalYeqgl~~~~~~~p-l~~~~s~giHESQs~~~En~vgrs~~f~~~~~p~ 322 (499)
T 1ka2_A 245 GI-RDVRITTRYEGYDFRRTILSTVHEFGHALYELQQDERFMFTP-IAGGVSLGIHESQSRFWENIIGRSKEFVELIYPV 322 (499)
T ss_dssp ET-TEEEEEECCCSBCTHHHHHHHHHHHHHHHHHHTCCGGGTTST-TSSCCCHHHHHHHHHHHHTTTTTSHHHHHHHHHH
T ss_pred CC-CCEEEEEEECCCCHHHHHHHHHHCCCHHHHHCCCCHHHCCCC-CCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf 87-752465100454168899999850005676438987757776-6678775513314589988884689899987167
Q ss_pred -------HCCCCCHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf -------41389989999999------99862069999999999999999972120168999899999999999986077
Q gi|254780915|r 459 -------LQAASSKEERKILL------ANKIEDMLNSIVRQISFYDFELKLHTERRSTGDIPTHRINEIWLETQKESLGP 525 (626)
Q Consensus 459 -------~~~~~~~~~~~~ll------~~~~~~~~~~~~~q~~~~~fe~~~h~~~~~~~~~t~~~l~~~~~~~~~~~~g~ 525 (626)
++....++....+- -....+-.......+.+.++|+++.+ ++++++++.+.|++..++|.|.
T Consensus 323 ~~~~f~~~~~~~~~~~y~~~n~v~~~~ir~~ADEvty~lHi~lR~eiEk~l~~-----g~l~v~dlp~~W~~~~~~ylgi 397 (499)
T 1ka2_A 323 LKENLPFMSNYTPEDVYLYFNIVRPDFIRTEADVVTYNFHILLRFKLERLMVS-----EEIKAKDLPEMWNDEMERLLGI 397 (499)
T ss_dssp HHHHCGGGGGCCHHHHHHHHTCCCCCSCGGGCCTTTHHHHHHHHHHHHHHHHH-----SCCCGGGHHHHHHHHHHHHHSC
T ss_pred HHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHEECCHHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHHHHHCCC
T ss_conf 89757876888899999876550610454430131221379999999999975-----9998678999999999997599
Q ss_pred CCCCCCCCCCCEEECCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHCCC-----------HHHHHHHH--HHHHCCCCCC
Q ss_conf 634588788850015254106675-258999999999999999995673-----------32899999--9983269999
Q gi|254780915|r 526 AFDLSDLEYGSFWMMVPHFIESSF-YVYAYAFGNCLVNSLYDIYKSNTV-----------DCFKEKYL--NILRAGNSKH 591 (626)
Q Consensus 526 ~~~~~~~~~~~~w~~~~H~y~~~f-Y~y~Y~~~~~~a~~l~~~~~~~~~-----------~~~~~~y~--~~L~~Ggs~~ 591 (626)
.++- ..-+|.+-.|.+.++| |+-+|++|.+.|+++|.+.+++-+ ....+ |+ +|.+.|++.+
T Consensus 398 ~p~~----d~~G~lQDiHw~~g~fGYfptY~LG~i~aaQ~~~~~~~~~~~~~~~~~~g~~~~~~~-wL~~~i~~~G~~~~ 472 (499)
T 1ka2_A 398 RPRK----YSEGILQDIHWAHGSIGYFPTYTIGTLLSAQLYYHIKKDIPDFEEKVAKAEFDPIKA-WLREKIHRWGSIYP 472 (499)
T ss_dssp CCSS----GGGTTTSCSHHHHTCTTCTHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHTCCHHHHH-HHHHHTGGGTTSSC
T ss_pred CCCC----CCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHH-HHHHHHHHCCCCCC
T ss_conf 9998----767677556561687677368999999999999999986758888887289699999-99999985506899
Q ss_pred HHHHHHHC-CCCCCCHHHHHH
Q ss_conf 79999970-889899889999
Q gi|254780915|r 592 YSELLLPL-NINLSDPNFWER 611 (626)
Q Consensus 592 ~~el~k~~-G~d~~~~~~~~~ 611 (626)
|.|+++.+ |-.++ |+++-+
T Consensus 473 ~~ell~~~TGe~l~-~~~~~~ 492 (499)
T 1ka2_A 473 PKELLKKAIGEDMD-AEYFVR 492 (499)
T ss_dssp HHHHHHHHHSSCCC-THHHHH
T ss_pred HHHHHHHHHCCCCC-HHHHHH
T ss_conf 89999998689999-899999