HHsearch results for GI: 254780915 and protein with PDBid: 1ka2_A

>1ka2_A M32 carboxypeptidase; hexxh motif, M32 family, metallopeptidase; 2.20A {Pyrococcus furiosus} SCOP: d.92.1.5 PDB: 1k9x_A 1ka4_A
Probab=99.90  E-value=2.9e-18  Score=146.78  Aligned_cols=336  Identities=17%  Similarity=0.186  Sum_probs=227.6

Q ss_pred             HHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHCCCCCHH-HHHHH--HCCCCHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf             7999999999986505-4216999999866678865427899988-97622--225898999999998763062899999
Q gi|254780915|r  237 VRKSAAKALSHTFNKS-SHIFSFITNTLAKDEEIQDRWRKYEKIA-DSRHL--SNNVEPYVIEALMQSVKNYYPKTSHRY  312 (626)
Q Consensus       237 ~Rk~a~~a~~~~~~~~-~~~~a~il~~iv~~r~e~A~llGy~s~~-~~~l~--~~~~~~~~~~~l~~~~~~~~~~~~~~~  312 (626)
                      .+-.+..++.++-.++ -..+++.|.+++.++.+.|+.+|++... +.-|.  ...++.+.++.++..++...+|+..+.
T Consensus       111 ~~s~~~~~W~~Ar~~nDf~~f~p~Lekli~L~re~A~~~~~~~~pYDaLLd~yE~g~t~~~ld~~F~~Lk~~L~pll~~i  190 (499)
T 1ka2_A          111 TTSLATKAWEEAKAKDDFSKFEPWLDKIISLAKRAAEYLGYEEEPYDALLDLYEEGLRTRDVEKMFEVLEKKLKPLLDKI  190 (499)
T ss_dssp             HHHHHHHHHHHHHHTTCGGGTHHHHHHHHHHHHHHHHHHCCSSCHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             86268999999731035999999999999999999998277788555556632899989999999999898899999999


Q ss_pred             HHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCC
Q ss_conf             99999870887531234440256554777998999999998666632899999998642485020103799874354766
Q gi|254780915|r  313 YELKKKWLKLDTMYFWDRLAPLPGTSQDIIPFEVARDLVLQSYAKFSPQMSIIAEKFFTHNWIDAPQYDGKGSGAFAHGT  392 (626)
Q Consensus       313 ~~~~~~~lg~~~l~~wD~~~~~~~~~~~~~~~ee~~~~v~~~~~~~~~e~~~~~~~~~~~~~iD~~~r~gKr~GA~~~~~  392 (626)
                      ....+    ...         ........|+.+....+....+..+|.++.       ..+      |-....+.||.++
T Consensus       191 ~~~~~----~~~---------~~~~~~~~f~~~~Q~~~~~~~~~~~Gfd~~-------~~G------Rld~s~HPF~~~~  244 (499)
T 1ka2_A          191 LEEGK----VPR---------EHPLEKEKYEREWMERVNLWILQKFGFPLG-------TRA------RLDVSAHPFTTEF  244 (499)
T ss_dssp             HHTTC----SCS---------CCGGGTCBCCHHHHHHHHHHHHHHHTCCBT-------TTE------EEEECSSCCEEEE
T ss_pred             HHCCC----CCC---------CCCCCCCCCCHHHHHHHHHHHHHHCCCCCH-------HCC------EEEECCCCCCCCC
T ss_conf             85457----898---------772003578899999987999974487701-------133------1441366211368


Q ss_pred             CCCCCCEEECCCCCC--HHHHHHHHHHHHHHHHHHHHC---CCCCCCCCCCHHHHHHHHHHHHHHHHH------HHH---
Q ss_conf             677751010365332--467999999845899999612---568776578005999886888999999------998---
Q gi|254780915|r  393 IPSVHPYILLNYLGK--PQDVMTLAHELGHGIHFVLSS---ETQGILTNNSSLTLAETASIFGETLTF------DSL---  458 (626)
Q Consensus       393 ~~~~~~~I~~N~~~~--~~dv~TL~HE~GHa~H~~ls~---~~~~~~~~~~~~~~aE~~S~~~E~~~~------~~~---  458 (626)
                      .+ ...+|..++..+  ...+....||.|||++-..-.   ..+| .+...++-+.|.-|-|+|+.+.      .+.   
T Consensus       245 ~~-~DvRittr~~~~~~~~~l~s~iHE~GHalYeqgl~~~~~~~p-l~~~~s~giHESQs~~~En~vgrs~~f~~~~~p~  322 (499)
T 1ka2_A          245 GI-RDVRITTRYEGYDFRRTILSTVHEFGHALYELQQDERFMFTP-IAGGVSLGIHESQSRFWENIIGRSKEFVELIYPV  322 (499)
T ss_dssp             ET-TEEEEEECCCSBCTHHHHHHHHHHHHHHHHHHTCCGGGTTST-TSSCCCHHHHHHHHHHHHTTTTTSHHHHHHHHHH
T ss_pred             CC-CCEEEEEEECCCCHHHHHHHHHHCCCHHHHHCCCCHHHCCCC-CCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf             87-752465100454168899999850005676438987757776-6678775513314589988884689899987167


Q ss_pred             -------HCCCCCHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf             -------41389989999999------99862069999999999999999972120168999899999999999986077
Q gi|254780915|r  459 -------LQAASSKEERKILL------ANKIEDMLNSIVRQISFYDFELKLHTERRSTGDIPTHRINEIWLETQKESLGP  525 (626)
Q Consensus       459 -------~~~~~~~~~~~~ll------~~~~~~~~~~~~~q~~~~~fe~~~h~~~~~~~~~t~~~l~~~~~~~~~~~~g~  525 (626)
                             ++....++....+-      -....+-.......+.+.++|+++.+     ++++++++.+.|++..++|.|.
T Consensus       323 ~~~~f~~~~~~~~~~~y~~~n~v~~~~ir~~ADEvty~lHi~lR~eiEk~l~~-----g~l~v~dlp~~W~~~~~~ylgi  397 (499)
T 1ka2_A          323 LKENLPFMSNYTPEDVYLYFNIVRPDFIRTEADVVTYNFHILLRFKLERLMVS-----EEIKAKDLPEMWNDEMERLLGI  397 (499)
T ss_dssp             HHHHCGGGGGCCHHHHHHHHTCCCCCSCGGGCCTTTHHHHHHHHHHHHHHHHH-----SCCCGGGHHHHHHHHHHHHHSC
T ss_pred             HHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHEECCHHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHHHHHCCC
T ss_conf             89757876888899999876550610454430131221379999999999975-----9998678999999999997599


Q ss_pred             CCCCCCCCCCCEEECCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHCCC-----------HHHHHHHH--HHHHCCCCCC
Q ss_conf             634588788850015254106675-258999999999999999995673-----------32899999--9983269999
Q gi|254780915|r  526 AFDLSDLEYGSFWMMVPHFIESSF-YVYAYAFGNCLVNSLYDIYKSNTV-----------DCFKEKYL--NILRAGNSKH  591 (626)
Q Consensus       526 ~~~~~~~~~~~~w~~~~H~y~~~f-Y~y~Y~~~~~~a~~l~~~~~~~~~-----------~~~~~~y~--~~L~~Ggs~~  591 (626)
                      .++-    ..-+|.+-.|.+.++| |+-+|++|.+.|+++|.+.+++-+           ....+ |+  +|.+.|++.+
T Consensus       398 ~p~~----d~~G~lQDiHw~~g~fGYfptY~LG~i~aaQ~~~~~~~~~~~~~~~~~~g~~~~~~~-wL~~~i~~~G~~~~  472 (499)
T 1ka2_A          398 RPRK----YSEGILQDIHWAHGSIGYFPTYTIGTLLSAQLYYHIKKDIPDFEEKVAKAEFDPIKA-WLREKIHRWGSIYP  472 (499)
T ss_dssp             CCSS----GGGTTTSCSHHHHTCTTCTHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHTCCHHHHH-HHHHHTGGGTTSSC
T ss_pred             CCCC----CCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHH-HHHHHHHHCCCCCC
T ss_conf             9998----767677556561687677368999999999999999986758888887289699999-99999985506899


Q ss_pred             HHHHHHHC-CCCCCCHHHHHH
Q ss_conf             79999970-889899889999
Q gi|254780915|r  592 YSELLLPL-NINLSDPNFWER  611 (626)
Q Consensus       592 ~~el~k~~-G~d~~~~~~~~~  611 (626)
                      |.|+++.+ |-.++ |+++-+
T Consensus       473 ~~ell~~~TGe~l~-~~~~~~  492 (499)
T 1ka2_A          473 PKELLKKAIGEDMD-AEYFVR  492 (499)
T ss_dssp             HHHHHHHHHSSCCC-THHHHH
T ss_pred             HHHHHHHHHCCCCC-HHHHHH
T ss_conf             89999998689999-899999