HHsearch results for GI: 254780915 and protein with PDBid: 2qr4_A
>2qr4_A Peptidase M3B, oligoendopeptidase F; structural genomics, PSI-2, protein structure initiative; 2.50A {Enterococcus faecium DO}
Probab=100.00 E-value=0 Score=779.08 Aligned_cols=569 Identities=24% Similarity=0.380 Sum_probs=527.6
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf 88927899999999999999999974233102334998999999999999999999999999864205799189999999
Q gi|254780915|r 47 SHDSQEISNDMECIEHESLAFKTRWEGNLAHATNQKNCHSLGAAIAEYERICELIGRIASYAMLSYNCNLSSPTIRKFYT 126 (626)
Q Consensus 47 ~~~~~e~~~dl~~~~~~i~~~~~~~~~~l~~~~~~~~~~~l~~~l~~~e~i~~~l~rv~~ya~l~~s~dt~d~~~~~~~~ 126 (626)
+.++++|.++++++++.+.++. +++|+|.. ++++|.++|+++|+++..++++++|++|..++|++|+.++++.+
T Consensus 2 ~~sd~~~e~~~~~l~~~i~~~~-~~~~~l~~-----~~~~~~~~i~~~e~~~~~l~~~~~ya~l~~s~dt~d~~~~~~~~ 75 (587)
T 2qr4_A 2 SLSDQEFDEKYLELSEELKQSE-KHKGTLDQ-----GASQFLNAIEFVLRVYRQTEVIYVYAHLKNDQDTGNTDYQALYA 75 (587)
T ss_dssp -CHHHHHHHHHHHHHHHGGGHH-HHTTCGGG-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHH-HHHHHHCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
T ss_conf 9998999999999999999999-99742358-----99999999999999999999999999855410478599999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf 99999999999887416988719989999998469001111799999997423317167998766300100036777777
Q gi|254780915|r 127 DINAKLADFEKVLIFFALEINTLDEALLEQSYAQDPLTLKYSAWIKNIRKIKKHLLSNDMECLLSDTSQVGREALKRFFC 206 (626)
Q Consensus 127 ~~~~~~s~~~~~l~~~~~e~~~l~e~~l~~~~~~~~~l~~y~~~~~~l~~~~~~~l~~~~E~~l~~~~~~~~~~~~~~~~ 206 (626)
+++++++++++.++++++++.+++++.+..++.++++|+.|+..+.++++..++.+++..|+++...+.....++.....
T Consensus 76 ~~~~l~~~~~~~~~~~~~el~~l~e~~l~~~~~~~~~L~~~~~~l~~~~~~~~~~~~~~~e~~l~~~~~~~~~~~~~~~~ 155 (587)
T 2qr4_A 76 RASSLFSKVSEAVSWFEPEILQLSDDQIWQYFKEEPKLEVYRHYIQQIVDNRAHVLSAEQESLLAGAGEIFDASSDTFAV 155 (587)
T ss_dssp HHHHHHHHHHHHTTTHHHHHTTSCHHHHHHHHHHCGGGGGGHHHHHHHHTTGGGCCCHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHH
T ss_conf 99999999999998888999837999999998659647889999999998634005088899999864520103778899
Q ss_pred HHHHHHHHH------HHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 644443322------10034752332135418887679999999999865054216999999866678865427899988
Q gi|254780915|r 207 ENIESLRFK------INDQKIPLTKAYKSFFDSDREVRKSAAKALSHTFNKSSHIFSFITNTLAKDEEIQDRWRKYEKIA 280 (626)
Q Consensus 207 ~~~~~~~~~------~~~~~~~~~~~~~~l~~~dr~~Rk~a~~a~~~~~~~~~~~~a~il~~iv~~r~e~A~llGy~s~~ 280 (626)
....+.... ......+.+....+.+++||++|+++|+++.+++.++..+++.++++++++|.+.|+++||+|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~dr~~R~~~~~a~~~~~~~~~~~~~~il~~~~~~r~~~A~l~Gy~~~a 235 (587)
T 2qr4_A 156 LNNADLVFPTIEGENGEIVQLSHGVYGQLLESTDRRVREAAFKGLYSVYEQFRNTFASTLGTHIKGHNFKAKVRNYSSAR 235 (587)
T ss_dssp HHHTTCCCCEEECTTSCEEECCHHHHHHHHTCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTTCSSHH
T ss_pred HHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHH
T ss_conf 87676520023046760564268789988759578899999999999998471778999999999999999745999889
Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 97622225898999999998763062899999999998708875312344402565547779989999999986666328
Q gi|254780915|r 281 DSRHLSNNVEPYVIEALMQSVKNYYPKTSHRYYELKKKWLKLDTMYFWDRLAPLPGTSQDIIPFEVARDLVLQSYAKFSP 360 (626)
Q Consensus 281 ~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lg~~~l~~wD~~~~~~~~~~~~~~~ee~~~~v~~~~~~~~~ 360 (626)
++++..++++..++..+. .+.....+.++++...+++.+|++.+++||+.++..+...+.++++++.+.+...+.++++
T Consensus 236 ~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (587)
T 2qr4_A 236 EASLSNNHIPESVYDTLV-DVVNKHLPLLHRYMELRKRLLEVEKLHMYDLYTPVLGEAPITFTYEEAKEKALEALKPMGE 314 (587)
T ss_dssp HHHHHTTTCCHHHHHHHH-HHHHHTHHHHHHHHHHHHHHHTCSSBCGGGSSSCSSCCCCC-----CCHHHHHHHTGGGHH
T ss_pred HHHHHHCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 999886436188887499-9999866999999999999839962221033057776656778889999999975412337
Q ss_pred HHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
Q ss_conf 99999998642485020103799874354766677751010365332467999999845899999612568776578005
Q gi|254780915|r 361 QMSIIAEKFFTHNWIDAPQYDGKGSGAFAHGTIPSVHPYILLNYLGKPQDVMTLAHELGHGIHFVLSSETQGILTNNSSL 440 (626)
Q Consensus 361 e~~~~~~~~~~~~~iD~~~r~gKr~GA~~~~~~~~~~~~I~~N~~~~~~dv~TL~HE~GHa~H~~ls~~~~~~~~~~~~~ 440 (626)
+|.+++++++..+|+|.++|+||++||||++.+ .++|+|+||++++++||.|||||||||+|+++++..+|+.++++++
T Consensus 315 ~~~~~~~~~~~~~~~d~~~~~~k~~g~~~~~~~-~~~p~i~~n~~~s~ddv~TLfHEfGHalH~lls~~~~~~~~~~~~~ 393 (587)
T 2qr4_A 315 EYMAIVEKAFSERWIDVVENKGKRSGAYSSGSY-DTNPYILLNWHDTLDQLFTLVHEMGHSVHSYFTRSNQPYVYGDYSI 393 (587)
T ss_dssp HHHHC-----------------------------------------CHHHHHHHHHHHHHHHHHHHC------------C
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCH
T ss_conf 999999999754873447789998777137877-7886413577775788999999716999999970578853477763
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
Q ss_conf 99988688899999999841389989999999998620699999999999999999721201689998999999999999
Q gi|254780915|r 441 TLAETASIFGETLTFDSLLQAASSKEERKILLANKIEDMLNSIVRQISFYDFELKLHTERRSTGDIPTHRINEIWLETQK 520 (626)
Q Consensus 441 ~~aE~~S~~~E~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~q~~~~~fe~~~h~~~~~~~~~t~~~l~~~~~~~~~ 520 (626)
||||+||||||+|||||++.++.+++++..++.+++.+.+.++.+|+.++.||+.+|+.+..++.+|+++++++|.++++
T Consensus 394 d~vE~pSq~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (587)
T 2qr4_A 394 FLAEIASTTNENILTEYLLETEKDPRVRAYVLNHYLDGFKGTVFRQTQFAEFEHFMHTEDEKGVPLTSEYLSDSYGKLNA 473 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
T ss_conf 78779899999999977652226988999999968888998998857999999999997531478999999999999999
Q ss_pred HHCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHCC
Q ss_conf 86077634588788850015254106675258999999999999999995673328999999983269999799999708
Q gi|254780915|r 521 ESLGPAFDLSDLEYGSFWMMVPHFIESSFYVYAYAFGNCLVNSLYDIYKSNTVDCFKEKYLNILRAGNSKHYSELLLPLN 600 (626)
Q Consensus 521 ~~~g~~~~~~~~~~~~~w~~~~H~y~~~fY~y~Y~~~~~~a~~l~~~~~~~~~~~~~~~y~~~L~~Ggs~~~~el~k~~G 600 (626)
+|+|+.++.+ +..+++|++|+||| +|||||+|+||+|+|+++|.+++++| ++++++|++||+.|||++|.|++|.||
T Consensus 474 ~~~g~~~~~~-~~~~~~w~~~~H~~-~~~YyysY~~~~v~a~~~~~~~~~~~-~~~~~~y~~~L~~Ggs~~~~e~~k~~G 550 (587)
T 2qr4_A 474 KYYGPAVEED-PEIKFEWSRIPHFY-YNYYVFQYSTGFSAASALAKKILNQE-PEALENYLAYLKAGNSDYPVEVMKKAG 550 (587)
T ss_dssp HHHCTTBCCC-GGGGGGGGGCGGGG-SSSCTHHHHHHHHHHHHHHHHHHTTC-TTHHHHHHHHHHHCSCSCHHHHHHHTT
T ss_pred HHCCCCCCCC-CCCCCEEEECCEEE-ECCCCHHHHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHCCCCCCHHHHHHHCC
T ss_conf 9749986658-98686154508374-69855999999999999999999768-889999999971749999999999839
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 89899889999999999999998609
Q gi|254780915|r 601 INLSDPNFWERGLQTVEKMIDDVEKM 626 (626)
Q Consensus 601 ~d~~~~~~~~~~~~~~~~~i~~~e~l 626 (626)
+|+++|+||+++++.|+++|||||+|
T Consensus 551 ~d~~~~~~~~~~~~~~~~~i~e~~~l 576 (587)
T 2qr4_A 551 VDMTQAAYIEDAMSMFEQRLNELEEL 576 (587)
T ss_dssp CCTTSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99998899999999999999999999