HHsearch results for GI: 254780915 and protein with PDBid: 3o0y_A
>3o0y_A Lipoprotein; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, lipid protein; 1.70A {Colwellia psychrerythraea}
Probab=95.39 E-value=0.13 Score=28.04 Aligned_cols=164 Identities=15% Similarity=0.061 Sum_probs=94.0
Q ss_pred CHHHHHHHHHHH--HHHHHHHHHCCCC--CCC-CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 246799999984--5899999612568--776-57800599988688899999999841389989999999998620699
Q gi|254780915|r 407 KPQDVMTLAHEL--GHGIHFVLSSETQ--GIL-TNNSSLTLAETASIFGETLTFDSLLQAASSKEERKILLANKIEDMLN 481 (626)
Q Consensus 407 ~~~dv~TL~HE~--GHa~H~~ls~~~~--~~~-~~~~~~~~aE~~S~~~E~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~ 481 (626)
.+....|.+||. ||-++..++..+. |.. .......++|==....|.+..++-.-. .++..+...|...+...
T Consensus 429 ~~~~~~l~~HE~~PGHh~Q~~~~~e~~~~~~~r~~~~~~~~~EGWAlYaE~l~~e~g~~~-~dp~~~lg~l~~~l~ra-- 505 (609)
T 3o0y_A 429 KFGLKTLTYHEANPGHHWQIALNLDQAELPFLRRIAPYNAYTEGWALYSEQVAYELGMYE-NDPFGDLGRLQAELFRA-- 505 (609)
T ss_dssp GGGHHHHHHHHSTTTHHHHHHHHHTCTTSCHHHHTCCCHHHHHHHHHHHHHHHHHTTTTT-TCHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHH--
T ss_conf 577778899850378899999998615883898871674577559999998898736567-98899999999999999--
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99999999999999972120168999899999999999986077634588788850015254106675258999999999
Q gi|254780915|r 482 SIVRQISFYDFELKLHTERRSTGDIPTHRINEIWLETQKESLGPAFDLSDLEYGSFWMMVPHFIESSFYVYAYAFGNCLV 561 (626)
Q Consensus 482 ~~~~q~~~~~fe~~~h~~~~~~~~~t~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~w~~~~H~y~~~fY~y~Y~~~~~~a 561 (626)
.....|..+|.. ..|.++-.+.|.+ ..|. .+......|.+. ...|.++-+|.+|++.=
T Consensus 506 ------~RlvvD~glH~~-----gws~e~A~~~~~~----~~~~----~~~~a~~ev~Ry---~~~Pgqa~sY~~G~l~i 563 (609)
T 3o0y_A 506 ------VRLVVDTGLHDK-----RWTREQAISYMSE----QTGT----AESDVVAEIERY---MAWPGQALGYKLGMLKI 563 (609)
T ss_dssp ------HHHHHHHHHHTS-----CCCHHHHHHHHHH----HHCC----CHHHHHHHHHHH---HHSTTGGGHHHHHHHHH
T ss_pred ------HHHHHHHHHCCC-----CCCHHHHHHHHHH----HCCC----CHHHHHHHHHHH---HHCCHHHHHHHHHHHHH
T ss_conf ------999953524037-----9999999999998----1699----859999999999---83928799999999999
Q ss_pred HHHHHHHHHCCCHHH--HHHHHHHHHCCCCCCHHHHHH
Q ss_conf 999999995673328--999999983269999799999
Q gi|254780915|r 562 NSLYDIYKSNTVDCF--KEKYLNILRAGNSKHYSELLL 597 (626)
Q Consensus 562 ~~l~~~~~~~~~~~~--~~~y~~~L~~Ggs~~~~el~k 597 (626)
.+|-...++.-.+.| .++-..+|+.|.. |..+++
T Consensus 564 ~~LR~~a~~~lG~~Fdlk~FHd~vL~~G~~--Pl~~l~ 599 (609)
T 3o0y_A 564 LSLREQAKARLGDKFDLAEFHDVVLLNGAV--PMAVLS 599 (609)
T ss_dssp HHHHHHHHHHHGGGCCHHHHHHHHHTTCSC--CHHHHH
T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHHCCCC--CHHHHH
T ss_conf 999999999858889999999999967999--899999