HHSEARCH alignment of GI: 254780915 and SCOP domain: d1k9xa_

Alignment
>d1k9xa_ d.92.1.5 (A:) Thermostable carboxypeptidase 1 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.85  E-value=3.1e-17  Score=137.73  Aligned_cols=335  Identities=16%  Similarity=0.160  Sum_probs=221.0

Q ss_pred             HHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHCCCC-CHHHHHHH--HCCCCHHHHHHHHHHHHHCCHHHHHHHHH
Q ss_conf             9999999998650-54216999999866678865427899-98897622--22589899999999876306289999999
Q gi|254780915|r  239 KSAAKALSHTFNK-SSHIFSFITNTLAKDEEIQDRWRKYE-KIADSRHL--SNNVEPYVIEALMQSVKNYYPKTSHRYYE  314 (626)
Q Consensus       239 k~a~~a~~~~~~~-~~~~~a~il~~iv~~r~e~A~llGy~-s~~~~~l~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  314 (626)
                      -.+..++.+.-.+ .-..+++.|.+++.+..+.|..+|++ +..|.-|.  ...++...++.++..++...+|+..+...
T Consensus       111 s~a~~~W~~AR~~nDf~~f~P~Leklv~L~re~A~~l~~~~~pYDaLLd~yEpg~t~~~ld~iF~~Lk~~L~pLl~~i~~  190 (497)
T d1k9xa_         111 SLATKAWEEAKAKDDFSKFEPWLDKIISLAKRAAEYLGYEEEPYDALLDLYEEGLRTRDVEKMFEVLEKKLKPLLDKILE  190 (497)
T ss_dssp             HHHHHHHHHHHHTTCGGGTHHHHHHHHHHHHHHHHHHCCSSCHHHHHHHHHSTTCCHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             42289999632127899999999999999999999816778841367886189998999999998888778899999985


Q ss_pred             HHHHHCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCCHHCCCCCCCCCCCCCCC
Q ss_conf             99987088753123444025655477799899999999866663289999999864-24850201037998743547666
Q gi|254780915|r  315 LKKKWLKLDTMYFWDRLAPLPGTSQDIIPFEVARDLVLQSYAKFSPQMSIIAEKFF-THNWIDAPQYDGKGSGAFAHGTI  393 (626)
Q Consensus       315 ~~~~~lg~~~l~~wD~~~~~~~~~~~~~~~ee~~~~v~~~~~~~~~e~~~~~~~~~-~~~~iD~~~r~gKr~GA~~~~~~  393 (626)
                      ..+    .+.         ........|+.+.-.++....+..+|.+        + ..+      |-....+.||.++.
T Consensus       191 ~~~----~~~---------~~~~~~~~~~~~~Q~~l~~~~~~~lGfD--------f~~~G------Rld~s~HPF~~~~~  243 (497)
T d1k9xa_         191 EGK----VPR---------EHPLEKEKYEREWMERVNLWILQKFGFP--------LGTRA------RLDVSAHPFTTEFG  243 (497)
T ss_dssp             HCS----SCS---------CCGGGTCBCCHHHHHHHHHHHHHHHTCC--------BTTTE------EEEECSSCCEEEEE
T ss_pred             CCC----CCC---------CCCCCCCCCCHHHHHHHHHHHHHHHCCC--------CCCCC------CEEECCCCCCCCCC
T ss_conf             467----998---------7732136898999999999999985767--------54564------23433775325788


Q ss_pred             CCCCCEEECCCCCC--HHHHHHHHHHHHHHHHHHHHC---CCCCCCCCCCHHHHHHHHHHHHHHHHH------HHH----
Q ss_conf             77751010365332--467999999845899999612---568776578005999886888999999------998----
Q gi|254780915|r  394 PSVHPYILLNYLGK--PQDVMTLAHELGHGIHFVLSS---ETQGILTNNSSLTLAETASIFGETLTF------DSL----  458 (626)
Q Consensus       394 ~~~~~~I~~N~~~~--~~dv~TL~HE~GHa~H~~ls~---~~~~~~~~~~~~~~aE~~S~~~E~~~~------~~~----  458 (626)
                      + ...+|..++..+  ...+.+..||+|||+.-.--.   ..+| .+...++-+.|..|-|+|+.+.      .++    
T Consensus       244 ~-~DvRITTr~~e~~~~~~l~s~iHE~GHalYEq~l~~~~~~~p-lg~~~s~giHESQSr~~En~vgrs~~F~~~~~p~~  321 (497)
T d1k9xa_         244 I-RDVRITTRYEGYDFRRTILSTVHEFGHALYELQQDERFMFTP-IAGGVSLGIHESQSRFWENIIGRSKEFVELIYPVL  321 (497)
T ss_dssp             T-TEEEEEECCCSBCTHHHHHHHHHHHHHHHHHHTSCGGGTTST-TSSCSCHHHHHHHHHHHHTTTTTSHHHHHHHHHHH
T ss_pred             C-CCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCC-CCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf             5-642031231544378899999997646678738897671487-66787754012899999999964899999872477


Q ss_pred             ------HCCCCCHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf             ------41389989999999998------620699999999999999999721201689998999999999999860776
Q gi|254780915|r  459 ------LQAASSKEERKILLANK------IEDMLNSIVRQISFYDFELKLHTERRSTGDIPTHRINEIWLETQKESLGPA  526 (626)
Q Consensus       459 ------~~~~~~~~~~~~ll~~~------~~~~~~~~~~q~~~~~fe~~~h~~~~~~~~~t~~~l~~~~~~~~~~~~g~~  526 (626)
                            .+....++....+...+      -.+-....+..+.+.++|.++.+     |.++++++.+.|.+..++|.|-.
T Consensus       322 ~~~f~~~~~~~~e~~y~~~n~v~p~~IRveADE~ty~lHi~lR~eiEk~li~-----g~l~v~Dlp~~Wn~~~~~ylGv~  396 (497)
T d1k9xa_         322 KENLPFMSNYTPEDVYLYFNIVRPDFIRTEADVVTYNFHILLRFKLERLMVS-----EEIKAKDLPEMWNDEMERLLGIR  396 (497)
T ss_dssp             HHHCGGGGGCCHHHHHHHHTCCCCCSCGGGCCTTTHHHHHHHHHHHHHHHHH-----SCCCGGGHHHHHHHHHHHHHSCC
T ss_pred             HHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHHHHHCCCC
T ss_conf             7636656788889999875331764788988876522789999999999984-----99987999999999999856989


Q ss_pred             CCCCCCCCCCEEECCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHCCC-----------HHHHHHHH-HHHHCCCCCCHH
Q ss_conf             34588788850015254106675-258999999999999999995673-----------32899999-998326999979
Q gi|254780915|r  527 FDLSDLEYGSFWMMVPHFIESSF-YVYAYAFGNCLVNSLYDIYKSNTV-----------DCFKEKYL-NILRAGNSKHYS  593 (626)
Q Consensus       527 ~~~~~~~~~~~w~~~~H~y~~~f-Y~y~Y~~~~~~a~~l~~~~~~~~~-----------~~~~~~y~-~~L~~Ggs~~~~  593 (626)
                      .+  ..  .-++.+=-|...+.| |.=+|+.|.+.|+++|...+++-+           .....-.+ +|-+.|.+.+|.
T Consensus       397 p~--~d--~~G~lQDiHW~~G~fGYFPtY~lG~i~aaQl~~~~~~~~~~~~~~~~~g~~~~l~~wL~e~i~~~G~~~~~~  472 (497)
T d1k9xa_         397 PR--KY--SEGILQDIHWAHGSIGYFPTYTIGTLLSAQLYYHIKKDIPDFEEKVAKAEFDPIKAWLREKIHRWGSIYPPK  472 (497)
T ss_dssp             CS--SG--GGTTTSCSHHHHTCCSCTHHHHHHHHHHHHHHHHHHTTSTTHHHHHHHTCCHHHHHHHHHHTGGGTTSSCHH
T ss_pred             CC--CC--CCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHH
T ss_conf             99--97--567898875607878876179999999999999999867798888761797999999999998542589989


Q ss_pred             HHHHHC-CCCCCCHHHHHHH
Q ss_conf             999970-8898998899999
Q gi|254780915|r  594 ELLLPL-NINLSDPNFWERG  612 (626)
Q Consensus       594 el~k~~-G~d~~~~~~~~~~  612 (626)
                      |+++.+ |-.++ |+++-+=
T Consensus       473 eli~~~TGe~l~-~~~~~~y  491 (497)
T d1k9xa_         473 ELLKKAIGEDMD-AEYFVRW  491 (497)
T ss_dssp             HHHHHHHSSCCC-THHHHHH
T ss_pred             HHHHHHHCCCCC-HHHHHHH
T ss_conf             999998689998-7999999


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Neurolysin-like
domain: Thermostable carboxypeptidase 1
species: Archaeon Pyrococcus furiosus [TaxId: 2261]