HHSEARCH alignment of GI: 254780915 and SCOP domain: d1s4bp_

Alignment
>d1s4bp_ d.92.1.5 (P:) Neurolysin (endopeptidase 24.16, thimet oligopeptidase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=543.34  Aligned_cols=529  Identities=15%  Similarity=0.110  Sum_probs=377.5

Q ss_pred             HHHHHHHHHHHCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999742331023349-98999999999999999999999999864205799189999999999999999998874169
Q gi|254780915|r   66 AFKTRWEGNLAHATNQK-NCHSLGAAIAEYERICELIGRIASYAMLSYNCNLSSPTIRKFYTDINAKLADFEKVLIFFAL  144 (626)
Q Consensus        66 ~~~~~~~~~l~~~~~~~-~~~~l~~~l~~~e~i~~~l~rv~~ya~l~~s~dt~d~~~~~~~~~~~~~~s~~~~~l~~~~~  144 (626)
                      +..++.+..+..+.... ...+|+|++.++++++..++++.+.+.+..+++ +|+++++...++.++++++.+.+.....
T Consensus        16 ~~i~~~~~~id~I~~~~~~~~tfen~i~~ld~~~~~l~~~~~~~~~l~~v~-~d~~~r~aa~~~~~~l~~~~~~i~~n~~   94 (654)
T d1s4bp_          16 ELIEQTKRVYDQVGTQEFEDVSYESTLKALADVEVTYTVQRNILDFPQHVS-PSKDIRTASTEADKKLSEFDVEMSMRED   94 (654)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCCTTTTHHHHHHHHHHHHHHHHHHHSHHHHC-SCHHHHHHHHHHHHHHHHHHHHHHTCHH
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHCCHH
T ss_conf             999999999999967998999999999999998879999999999987059-9999999999999999999998856799


Q ss_pred             HHHHCCHHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHH--------------
Q ss_conf             88719989999998---4690011117999999974233171679987663001000367777776--------------
Q gi|254780915|r  145 EINTLDEALLEQSY---AQDPLTLKYSAWIKNIRKIKKHLLSNDMECLLSDTSQVGREALKRFFCE--------------  207 (626)
Q Consensus       145 e~~~l~e~~l~~~~---~~~~~l~~y~~~~~~l~~~~~~~l~~~~E~~l~~~~~~~~~~~~~~~~~--------------  207 (626)
                      ...++.. ..+.-.   ...+..+-....+.+..+...+.-.++.+++........ .....+...              
T Consensus        95 Ly~~l~~-l~~~~~~~~L~~E~~r~le~~~~dF~~sG~~L~~~~r~r~~~l~~els-~L~~~F~~nl~~~~~~~~~~~~~  172 (654)
T d1s4bp_          95 VYQRIVW-LQEKVQKDSLRPEAARYLERLIKLGRRNGLHLPRETQENIKRIKKKLS-LLCIDFNKNLNEDTTFLPFTLQE  172 (654)
T ss_dssp             HHHHHHH-HHHHSCTTCSCHHHHHHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCEEEECTTT
T ss_pred             HHHHHHH-HHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999-980723025999999999999999998188399899999999999998-98899999754534456653653


Q ss_pred             --------HHHHHHHHHHCCC---CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             --------4444332210034---75233213541888767999999999986505421699999986667886542789
Q gi|254780915|r  208 --------NIESLRFKINDQK---IPLTKAYKSFFDSDREVRKSAAKALSHTFNKSSHIFSFITNTLAKDEEIQDRWRKY  276 (626)
Q Consensus       208 --------~~~~~~~~~~~~~---~~~~~~~~~l~~~dr~~Rk~a~~a~~~~~~~~~~~~a~il~~iv~~r~e~A~llGy  276 (626)
                              ..+..+....+..   ...+..+.+.+++||++|+++|+|+.+++..   .+..++.+|+++|.+.|+++||
T Consensus       173 l~Glp~~~l~~~~~~~~~~~~itl~~p~~~~~l~~~~~~~lRk~~~~a~~~r~~~---~n~~~l~~il~lR~e~A~LLGf  249 (654)
T d1s4bp_         173 LGGLPEDFLNSLEKMEDGKLKVTLKYPHYFPLLKKCHVPETRRKVEEAFNSRCKE---ENSAILKELVTLRAQKSRLLGF  249 (654)
T ss_dssp             TTTCCTTTTTSSEECTTSCEEEESSHHHHHHHHHHCCCHHHHHHHHHHHTTTTHH---HHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCC---HHHHHHHHHHHHHHHHHHHCCC
T ss_conf             0589879999987502686698337656554542167678999999997502621---0089999999999999870599


Q ss_pred             CCHHHHHHHHCCC-CHHHHHHHHHHHHHCCHHHHHHHHHHHHHH-------CC---CCCCCHHHHHHCCC----------
Q ss_conf             9988976222258-989999999987630628999999999987-------08---87531234440256----------
Q gi|254780915|r  277 EKIADSRHLSNNV-EPYVIEALMQSVKNYYPKTSHRYYELKKKW-------LK---LDTMYFWDRLAPLP----------  335 (626)
Q Consensus       277 ~s~~~~~l~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-------lg---~~~l~~wD~~~~~~----------  335 (626)
                      +||++|+|..+|+ +++.+..++..+.....|.+.+......+.       .|   .++|.|||+.++..          
T Consensus       250 ~s~A~y~L~~kMA~spe~V~~FL~~L~~~~~p~a~~E~~~L~~~~~~~~~~~~~~~~~~l~pWD~~yy~~k~r~~~~~~d  329 (654)
T d1s4bp_         250 HTHADYVLEMNMAKTSQTVATFLDELAQKLKPLGEQERAVILELKRAECERRGLPFDGRIRAWDMRYYMNQVEETRYCVD  329 (654)
T ss_dssp             SSHHHHHHTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCSSCCTTTHHHHHHHHHHHHTCCC
T ss_pred             CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
T ss_conf             86999978854047468899999999998589999999999999998875227987677773208899866342013334


Q ss_pred             -CCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHH-------------------HHHHHCCCCCHHCCCCCCCCCCCCCCCC
Q ss_conf             -5547779989999999986666-328999999-------------------9864248502010379987435476667
Q gi|254780915|r  336 -GTSQDIIPFEVARDLVLQSYAK-FSPQMSIIA-------------------EKFFTHNWIDAPQYDGKGSGAFAHGTIP  394 (626)
Q Consensus       336 -~~~~~~~~~ee~~~~v~~~~~~-~~~e~~~~~-------------------~~~~~~~~iD~~~r~gKr~GA~~~~~~~  394 (626)
                       .+.+++||.+.+.+++...+.. ||..+.+..                   ...++..|+|+|+|+||++||||+++++
T Consensus       330 ~~~l~~YF~l~~vl~Glf~l~~~Lfgi~f~~~~~~~~wh~dV~~~eV~d~~~~~~lG~~YlDl~~R~~K~~~a~~~~~~~  409 (654)
T d1s4bp_         330 QNLLKEYFPVQVVTHGLLGIYQELLGLAFHHEEGASAWHEDVRLYTARDAASGEVVGKFYLDLYPREGKYGHAACFGLQP  409 (654)
T ss_dssp             HHHHHTTCBHHHHHHHHHHHHHHHHTEEEEECTTCCCSSTTCEEEEEEETTTCCEEEEEEEECSCCTTSCSSCEEEEEEC
T ss_pred             HHHHHHCCHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCEECCCCC
T ss_conf             67663002199999999999999855224524667667876169999987899278999600466844367872303102


Q ss_pred             C----------CCCEEECCCCC---------CHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             7----------75101036533---------2467999999845899999612-56877657800599988688899999
Q gi|254780915|r  395 S----------VHPYILLNYLG---------KPQDVMTLAHELGHGIHFVLSS-ETQGILTNNSSLTLAETASIFGETLT  454 (626)
Q Consensus       395 ~----------~~~~I~~N~~~---------~~~dv~TL~HE~GHa~H~~ls~-~~~~~~~~~~~~~~aE~~S~~~E~~~  454 (626)
                      +          +..+++|||+.         ++++|.|||||||||||+++++ +++.++|+++++||||+|||+||+||
T Consensus       410 ~~~~~~~~~q~Pv~~lvcNf~~p~~~~p~lLs~~ev~TlFHEfGHalH~ll~~~~y~~~sGt~~~~DfvE~pSql~E~~~  489 (654)
T d1s4bp_         410 GCLRQDGSRQIAIAAMVANFTKPTADAPSLLQHDEVETYFHEFGHVMHQLCSQAEFAMFSGTHVERDFVEAPSQMLENWV  489 (654)
T ss_dssp             CEECTTSCEECEEEEEECCCCCCBTTBCCBCCHHHHHHHHHHHHHHHHHHHCCCSSGGGSTTCSCTTTTTHHHHHHHGGG
T ss_pred             CEECCCCCCCCCEEEEEEECCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf             40225556568768897303788899986204787645887787999887516655513661228888887799987544


Q ss_pred             HH----------HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf             99----------98413899899999999986206999999999999999997212016899989999999999998607
Q gi|254780915|r  455 FD----------SLLQAASSKEERKILLANKIEDMLNSIVRQISFYDFELKLHTERRSTGDIPTHRINEIWLETQKESLG  524 (626)
Q Consensus       455 ~~----------~~~~~~~~~~~~~~ll~~~~~~~~~~~~~q~~~~~fe~~~h~~~~~~~~~t~~~l~~~~~~~~~~~~g  524 (626)
                      |+          |.+++++|+++..+++..+..+.+..+.+|+.++.||+++|+..+.       +..+++.++.+++.+
T Consensus       490 ~~~~vL~~~a~h~~tge~lp~~l~~~~~~~~~~~~~~~~~~ql~~a~~D~~lH~~~~~-------~~~~~~~~l~~~~~~  562 (654)
T d1s4bp_         490 WEQEPLLRMSRHYRTGSAVPRELLEKLIESRQANTGLFNLRQIVLAKVDQALHTQTDA-------DPAEEYARLCQEILG  562 (654)
T ss_dssp             GSHHHHHHTCCCTTTCCCCCHHHHHHHHHGGGTTHHHHHHHHHHHHHHHHHHTTCSSC-------CHHHHHHHHHHHTTS
T ss_pred             CCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-------CHHHHHHHHHHHHCC
T ss_conf             7868774221347878988699999998651087899999999999999998478988-------769999999997268


Q ss_pred             CCCCCCCCCCCCEEECCCCCCC-CCCCHHHHHHHHHHHHHHHHH-HHHCC--CHHHHHHHHH-HHHCCCCCCHHHHHHHC
Q ss_conf             7634588788850015254106-675258999999999999999-99567--3328999999-98326999979999970
Q gi|254780915|r  525 PAFDLSDLEYGSFWMMVPHFIE-SSFYVYAYAFGNCLVNSLYDI-YKSNT--VDCFKEKYLN-ILRAGNSKHYSELLLPL  599 (626)
Q Consensus       525 ~~~~~~~~~~~~~w~~~~H~y~-~~fY~y~Y~~~~~~a~~l~~~-~~~~~--~~~~~~~y~~-~L~~Ggs~~~~el~k~~  599 (626)
                          ++......++++|+|+++ ++--||+|.|++|+|+++|.. |+++|  +++.+++|++ ||+.|||+||.|+++.|
T Consensus       563 ----~~~~~~~~~~~~F~Hl~~gY~a~YYsYlws~vlaad~~~~~F~~~g~~~~~~G~~~r~~iL~~Ggs~~~~e~~~~f  638 (654)
T d1s4bp_         563 ----VPATPGTNMPATFGHLAGGYDAQYYGYLWSEVYSMDMFHTRFKQEGVLNSKVGMDYRSCILRPGGSEDASAMLRRF  638 (654)
T ss_dssp             ----SCCCTTCCGGGGCGGGGTTCTTTTTHHHHHHHHHHHHHHHTHHHHCTTCHHHHHHHHHHTTTTGGGSCHHHHHHHH
T ss_pred             ----CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHH
T ss_conf             ----9999998788847511279541509999999999999999997669999999999999970067983799999984


Q ss_pred             -CCCCCCHHHHHH
Q ss_conf             -889899889999
Q gi|254780915|r  600 -NINLSDPNFWER  611 (626)
Q Consensus       600 -G~d~~~~~~~~~  611 (626)
                       |.+++...|++.
T Consensus       639 ~Gr~p~~~a~l~~  651 (654)
T d1s4bp_         639 LGRDPKQDAFLLS  651 (654)
T ss_dssp             HSSCCCSHHHHHH
T ss_pred             CCCCCCHHHHHHH
T ss_conf             5999980689986


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Neurolysin-like
domain: Neurolysin (endopeptidase 24.16, thimet oligopeptidase)
species: Human (Homo sapiens) [TaxId: 9606]