RPSBLAST alignment for GI: 254780915 and conserved domain: cd06459

>gnl|CDD|107215 cd06459, M3B_Oligoendopeptidase_F, Peptidase family M3B Oligopeptidase F (PepF; Pz-peptidase B; EC 3.4.24.-) is mostly bacterial and includes oligoendopeptidase F from Lactococcus lactis. This enzyme hydrolyzes peptides containing between 7 and 17 amino acids with fairly broad specificity. The PepF gene is duplicated in L. lactis on the plasmid that bears it, while a shortened second copy is found in Bacillus subtilis. Most bacterial PepFs are cytoplasmic endopeptidases; however, the PepF Bacillus amyloliquefaciens oligopeptidase is a secreted protein and may facilitate the process of sporulation. Specifically, the yjbG gene encoding the homolog of the PepF1 and PepF2 oligoendopeptidases of Lactococcus lactis has been identified in Bacillus subtilis as an inhibitor of sporulation initiation when over expressed from a multicopy plasmid. Length = 427
 Score =  386 bits (994), Expect = e-108
 Identities = 150/430 (34%), Positives = 226/430 (52%), Gaps = 6/430 (1%)

Query: 191 SDTSQVGREALKRFFCENIESLRFKI--NDQKIPLTKAYKSFF-DSDREVRKSAAKALSH 247
           +  S+ G  A   ++      L+F    + +++ L++   +     DREVRK A +AL  
Sbjct: 1   AKLSETGNSAWSEYYDLLNSDLKFIFEFDGEELTLSQNLSNLLESPDREVRKKAFEALYK 60

Query: 248 TFNKSSHIFSFITNTLAKDEEIQDRWRKYEKIADSRHLSNNVEPYVIEALMQSVKNYYPK 307
            + K  +  + I NTL K      + R Y+   ++   +NN+   V + L+  VK   P 
Sbjct: 61  AYEKYENTLAAILNTLVKLRLTLAKLRGYDSYLEAALFNNNIPEDVYDFLIAVVKENVP- 119

Query: 308 TSHRYYELKKKWLKLDTMYFWDRLAPLPGTSQDIIPFEVARDLVLQSYAKFSPQMSIIAE 367
             HRY +LKKK L LD +  +D  APL   +     +E A++LVL++ +   P+ +  A+
Sbjct: 120 LLHRYLKLKKKLLGLDKLRPYDLYAPLVSGNPPKYTYEEAKELVLEALSPLGPEYAEFAK 179

Query: 368 KFFTHNWIDAPQYDGKGSGAFAHGTIPSVHPYILLNYLGKPQDVMTLAHELGHGIHFVLS 427
           + F   WID     GK SGA+  G  P  HP+IL+N+ G   DV TLAHELGH  H  LS
Sbjct: 180 RAFEERWIDVEPRKGKRSGAYCTGLPPGKHPFILMNFNGTLDDVFTLAHELGHAFHSYLS 239

Query: 428 SETQGILTNNSSLTLAETASIFGETLTFDSLLQAASSKEERKILLANKIEDMLNSIVRQI 487
            + Q  L ++  + LAE AS F E L FD LL+ A   EE+  LL + +ED+  ++ RQ 
Sbjct: 240 RDNQPYLYSDYPIFLAEIASTFNELLLFDYLLKFAKDPEEKLYLLEHLLEDIRATLPRQT 299

Query: 488 SFYDFELKLHTERRSTGDIPTHRINEIWLETQKESLGPAFDLSDLEYGSFWMMVPHFIES 547
            F +FE +++        +    +NEI+ E +K+  G   ++ D E+G  W  +PHF   
Sbjct: 300 MFAEFEHEVYENPEEGEPLTAEELNEIYRELEKKYGGDLVEI-DEEHGYEWARIPHFYYV 358

Query: 548 SFYVYAYAFGNCLVNSLYDIYKSNTVDCFKEKYLNILRAGNSKHYSELLLPLNINLSDPN 607
            FYVY YAFG     +LY  YK +      EKYL +L+AG SK   ELL    ++L+ P+
Sbjct: 359 PFYVYPYAFGQLAALALYAKYKEDGEG-AVEKYLELLKAGGSKSPLELLKKAGVDLTSPD 417

Query: 608 FWERGLQTVE 617
           FWE  +  +E
Sbjct: 418 FWEEAIDVIE 427