RPSBLAST alignment for GI: 254780915 and conserved domain: TIGR02290

>gnl|CDD|162797 TIGR02290, M3_fam_3, oligoendopeptidase, pepF/M3 family. The M3 family of metallopeptidases contains several distinct clades. Oligoendopeptidase F as characterized in Lactococcus, the functionally equivalent oligoendopeptidase B of group B Streptococcus, and closely related sequences are described by TIGR00181. The present family is quite similar but forms a distinct clade, and a number of species have one member of each. A greater sequence difference separates members of TIGR02289, probable oligoendopeptidases of the M3 family that probably should not be designated PepF. Length = 587
 Score =  509 bits (1314), Expect = e-145
 Identities = 213/598 (35%), Positives = 324/598 (54%), Gaps = 20/598 (3%)

Query: 38  RWNLEDLYPSHDSQEISNDMECIEHESLAFKTRWEGNLAHATNQKNCHSLGAAIAEYERI 97
            W+L DLYP   S E   D++ I+  +  F++ ++  L    + K    L  A+  YE +
Sbjct: 1   EWDLSDLYPGGSSPEFEEDLKKIKALADEFESLYQEKLT-PLDAKGKEKLQNALKRYEAL 59

Query: 98  CELIGRIASYAMLSYNCNLSSPTIRKFYTDINAKLADFEKVLIFFALEINTLDE----AL 153
            EL+ ++ +YA L Y+ + S P  +    ++ A  ++ ++ L+FF LE+  L +    AL
Sbjct: 60  GELLSKVGAYASLLYSADTSDPEAKALLGELEALSSEIQQALLFFTLELMRLSDEVWAAL 119

Query: 154 LEQSYAQDPLTLKYSAWIKNIRKIKKHLLSNDMECLLSDTSQVGREALKRFFCENIESLR 213
           L            Y  ++K +RK   H LS + E L++  S  GR A  R + E   +LR
Sbjct: 120 LSDPDLAP-----YRFYLKELRKEAPHTLSEEEEKLINALSLTGRAAWSRLYDELTGTLR 174

Query: 214 FKIN-----DQKIPLTKAYKSFFDSDREVRKSAAKALSHTFNKSSHIFSFITNTLAKDEE 268
             ++     ++ + L +A     D D EVRK A KAL   + K++   + I N LA D  
Sbjct: 175 IPVDGKDGEEETLSLEQALNLLRDPDAEVRKKAFKALLKAWEKNAPTLAAILNALAGDRL 234

Query: 269 IQDRWRKYEKIADSRHLSNNVEPYVIEALMQSVKNYYPKTSHRYYELKKKWLKLDTMYFW 328
            + R R Y+   + R L N ++   ++A+++++K  YP    RYY+LK K L  + + F+
Sbjct: 235 TEYRLRGYDHPLEPRLLYNRIDQETLDAMLEAIKENYP-LFRRYYKLKAKLLGKEKLDFY 293

Query: 329 DRLAPLPGTSQDIIPFEVARDLVLQSYAKFSPQMSIIAEKFFTHNWIDAPQYDGKGSGAF 388
           D  APL  +S     F+ A++LVL+++ KFSP+M+  AEK F   WIDA    GK  GAF
Sbjct: 294 DLYAPLGDSSAKTYTFDEAKELVLEAFGKFSPEMADFAEKAFEEGWIDAEPRPGKRGGAF 353

Query: 389 AHGTIPSVHPYILLNYLGKPQDVMTLAHELGHGIHFVLSSETQGILTNNSSLTLAETASI 448
             G  PS  P +L+NY G  +DV TLAHELGH  H  L+ + Q +L     +TLAETASI
Sbjct: 354 CTGFPPSKEPRVLMNYDGSRRDVSTLAHELGHAYHSELAKD-QPLLNARYPMTLAETASI 412

Query: 449 FGETLTFDSLLQAASSKEERKILLANKIEDMLNSIVRQISFYDFELKLHTERRSTGDIPT 508
           F E L FD+LL+ A + EE+  LLA K+ED + ++VR  + + FE + H E R  G++  
Sbjct: 413 FAEMLLFDALLKEAKTDEEKLSLLAEKLEDAIATLVRIHARFLFERRFH-EARKEGELSA 471

Query: 509 HRINEIWLETQKESLGPAFDLSDLEYGSFWMMVPHFIESSFYVYAYAFGNCLVNSLYDIY 568
             I ++ LE QKES G A D S+L +   W   PHF  + FY Y Y FG   V  LY  Y
Sbjct: 472 DDICDLMLEAQKESYGDALDESEL-HPYMWAYKPHFYHAPFYNYPYTFGYLFVLGLYAKY 530

Query: 569 KSNTVDCFKEKYLNILRAGNSKHYSELLLPLNINLSDPNFWERGLQTVEKMIDDVEKM 626
           +      F  KY+ +LR   S    EL+     +L+ P+FW++G+  +E+ ID+ E++
Sbjct: 531 REEGES-FVPKYIALLRDTGSMTPEELVKKFGFDLTSPDFWQKGIDVIEEKIDEFEEL 587