RPSBLAST alignment of GI: 254780915 and protein with PDBid: 3ce2

>3ce2_A Putative peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.60A {Chlamydophila abortus S26} Length = 618

 Score =  344 bits (883), Expect = 3e-95
 Identities = 138/597 (23%), Positives = 250/597 (41%), Gaps = 16/597 (2%)

Query: 37  PRWNLEDLYPSHDSQEISNDMECIEHESLAFKTRWEGNLAHATNQKNCHSLGAAIAEYER 96
             W++  LY +  + +   D++    ++    T W    A      N  SL + +     
Sbjct: 22  DCWDITPLYLNRKAWKA--DLDSFGLKTDGSPT-WPALQATQYQLDNSESLLSLLTTLFS 78

Query: 97  ICELIGRIASYAMLSYNCNLSSPTIRKFYTDINAKLADFEKVLIFFALEINTLDEALLEQ 156
           I   + ++  YA L+++ ++++         I      F +   +    + +L E+L+ Q
Sbjct: 79  IERKLNKLYVYAHLTHDQDITNQEGIADLKSITHLHTLFAEETSWVQPALTSLSESLIAQ 138

Query: 157 SYAQDPLTLKYSAWIKNIRKIKKHLLSNDMECLLSDTSQVGREALKRFFCENIESLRFKI 216
            +   P    Y  +++ I ++  H  +   E +L+        A K F   +   + F  
Sbjct: 139 -HLSAPCLAPYRFYLEKIFRLSIHTGTPGEEKILASAFTPLEVASKAFSSLSDSEIPFGQ 197

Query: 217 ND----QKIPLTKAYKSFF--DSDREVRKSAAKALSHTFNKSSHIFSFITNTLAKDEEIQ 270
                    PL+ A  S +   +DRE+RK++  A    ++   H F+ + N   +     
Sbjct: 198 ATDSEGNSHPLSHALASLYMQSTDRELRKTSYLAQCERYHSYRHTFANLLNGKIQAHVFY 257

Query: 271 DRWRKYEKIADSRHLSNNVEPYVIEALMQSVKNYYPKTSHRYYELKKKWLKLDTMYFWDR 330
            + ++Y     +    NN+   V   L+  VK        +Y+ +K++ L L   +F+D 
Sbjct: 258 AKNKRYNSCLQAALYHNNIPTTVYTNLIDIVKKNSS-LITKYFSIKQRCLNLKDFHFYDV 316

Query: 331 LAPLPGTSQDIIPFEVARDLVLQSYAKFSPQM-SIIAEKFFTHNWIDAPQYDGKGSGAFA 389
            APL  + +    F+ A DL+  S +    +    + +   T  W+D  +   K SGA++
Sbjct: 317 YAPLSQSKEKKYTFQEAVDLIYTSLSPLGTEYIDTLKQGLTTQGWVDKYENLNKRSGAYS 376

Query: 390 HGTIPSVHPYILLNYLGKPQDVMTLAHELGHGIHFVLSSETQGILTNNSSLTLAETASIF 449
            G     HPY+LLNY G   DV  +AHE GH +H   S + Q        + LAE AS  
Sbjct: 377 SG-CYDSHPYVLLNYTGTLYDVSVIAHEGGHSMHSYFSRKHQPFHDAQYPIFLAEIASTL 435

Query: 450 GETLTFDSLLQAASSKEERKILLANKIEDMLNSIVRQISFYDFELKLHTERRSTGDIPTH 509
            E L  DS+L+ + SKEE+  +L   ++ + +++ RQ+ F  FE  +H        +   
Sbjct: 436 NEMLLMDSMLKESDSKEEKITILTRCLDTIFSTLFRQVLFASFEYDIHHAAEHGVPLTEE 495

Query: 510 RINEIWLETQKESLGPAFDLSDLEYGSFWMMVPHFIESSFYVYAYAFGNCLVNSLYDIYK 569
            ++  +   Q E  G             W  +PHF   +FYVY YA G        +   
Sbjct: 496 YLSSTYKNLQNEFYGEIITFDV-LSNIEWARIPHFY-YNFYVYQYATGIIAALCFLEKIL 553

Query: 570 SNTVDCFKEKYLNILRAGNSKHYSELLLPLNINLSDPNFWERGLQTVEKMIDDVEKM 626
           +N  D     YLN L++G S    E+L    +++      ++    +EK I ++  +
Sbjct: 554 NNE-DNALNSYLNFLKSGGSDFPLEILKKSGLDMGTVEPIQKAFCFIEKKIQELSSL 609