HHsearch alignment for GI: 254780916 and conserved domain: COG0464
>COG0464 SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones].
Probab=98.11 E-value=1.3e-06 Score=66.34 Aligned_cols=193 Identities=16% Similarity=0.150 Sum_probs=100.2
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC---CCCEEE
Q ss_conf 32048873277743679999998426754332101234655421002433112555532211100123446---671475
Q gi|254780916|r 162 CAIPIMIQGEFGVGKKRLSRFIHESGKRAFFPFFIVNCGMIDQDKIEKFLFGDVDLQTKNSAQFLGKFIEA---NGGTIV 238 (482)
Q Consensus 162 ~~~~vli~Ge~GtGK~~~A~~iH~~s~r~~~~fi~v~c~~~~~~~~e~~lFG~~~~~~~~~~~~~g~~~~a---~~Gtl~ 238 (482)
T Consensus 275 ~~~giLl~GpPGtGKT~lAkava~~~---~~~fi~v~~~~l~s-----k~vGese------k~ir~~F~~A~~~~p~iif 340 (494)
T COG0464 275 PPKGVLLYGPPGTGKTLLAKAVALES---RSRFISVKGSELLS-----KWVGESE------KNIRELFEKARKLAPSIIF 340 (494)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHC---CCCEEEECCHHHHH-----HHHHHHH------HHHHHHHHHHHHCCCCEEE
T ss_conf 88369998899975899999987544---98248843355540-----7765999------9999999999966998897
Q ss_pred ECCCCHHHHHHHHH----HHHHHHHHHCCCCCCCCCCCCCCEEEEECCCC--C-CCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 16642001889998----88877642001123553212343156521433--2-11111123337999886543344677
Q gi|254780916|r 239 LEEPDALPLAVQGR----IYNFIETGKIEFFDSRGAIRLDVRLIFLTEKN--L-LPQVKSHVFRKDLYYRISVFLINIST 311 (482)
Q Consensus 239 l~ei~~L~~~~Q~~----Ll~~l~~~~~~~~g~~~~~~~~~RiIa~t~~~--L-~~~~~~g~fr~dLy~rL~~~~i~iPp 311 (482)
T Consensus 341 iDEiDs~~~~r~~~~~~~~~rv~~~ll~~~d--~~e~~~~v~vi~aTN~p~~ld~a~lR~gRfd~-------~i~v~~pd 411 (494)
T COG0464 341 IDEIDSLASGRGPSEDGSGRRVVGQLLTELD--GIEKAEGVLVIAATNRPDDLDPALLRPGRFDR-------LIYVPLPD 411 (494)
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH--CCCCCCCEEEEECCCCCCCCCHHHHCCCCCEE-------EEEECCCC
T ss_conf 4886667412899876379999999999974--75443764899647983326875624366303-------78717989
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC----CCCCCHHHHHHHHC
Q ss_conf 87744222255667776410112233332111110001223389868999999999987438----98106889545421
Q gi|254780916|r 312 LRSRSEDIPWLVHFFLQSFCTKNAIKQISISDKALSLLTKYPWIDNVQELKNILLRAVIGLK----DSHLTEDRFVLLLS 387 (482)
Q Consensus 312 LReR~eDI~~L~~~fl~~~~~~~~~~~~~ls~~a~~~L~~y~WPGNvREL~n~i~r~~i~~~----~~~i~~~~~~~~l~ 387 (482)
T Consensus 412 ~~~r~~i~----~~~~~~~~~~~---~~~~~~~~l~~~t~~-~--sgadi~~i~~ea~~~~~~~~~~~~~~~~~~~~a~~ 481 (494)
T COG0464 412 LEERLEIF----KIHLRDKKPPL---AEDVDLEELAEITEG-Y--SGADIAALVREAALEALREARRREVTLDDFLDALK 481 (494)
T ss_pred HHHHHHHH----HHHHCCCCCCH---HHHHHHHHHHHHHCC-C--CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
T ss_conf 89999999----99854156511---556419999987527-7--89999999999999899854577634999999986